ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd17g10 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | SSRP_BACCR (Q815L5) SsrA-binding protein | 31 | 1.0 | 2 | SSRP_BACHK (Q6HBG1) SsrA-binding protein | 29 | 3.9 | 3 | SSRP_BACCZ (Q631M9) SsrA-binding protein | 29 | 3.9 | 4 | SSRP_BACC1 (Q72XZ2) SsrA-binding protein | 29 | 3.9 | 5 | SSRP_BACAN (Q81XA8) SsrA-binding protein | 29 | 3.9 |
|---|
>SSRP_BACCR (Q815L5) SsrA-binding protein| Length = 155 Score = 30.8 bits (68), Expect = 1.0 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = +3 Query: 27 WQHNIXALHINXXQEGNQTXHSPLVTR 107 W HN +HIN ++GN+ H PL TR Sbjct: 59 WVHN---MHINTYEQGNRFNHDPLRTR 82
>SSRP_BACHK (Q6HBG1) SsrA-binding protein| Length = 155 Score = 28.9 bits (63), Expect = 3.9 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = +3 Query: 27 WQHNIXALHINXXQEGNQTXHSPLVTR 107 W HN +HI+ ++GN+ H PL TR Sbjct: 59 WVHN---MHISTYEQGNRFNHDPLRTR 82
>SSRP_BACCZ (Q631M9) SsrA-binding protein| Length = 155 Score = 28.9 bits (63), Expect = 3.9 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = +3 Query: 27 WQHNIXALHINXXQEGNQTXHSPLVTR 107 W HN +HI+ ++GN+ H PL TR Sbjct: 59 WVHN---MHISTYEQGNRFNHDPLRTR 82
>SSRP_BACC1 (Q72XZ2) SsrA-binding protein| Length = 155 Score = 28.9 bits (63), Expect = 3.9 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = +3 Query: 27 WQHNIXALHINXXQEGNQTXHSPLVTR 107 W HN +HI+ ++GN+ H PL TR Sbjct: 59 WVHN---MHISTYEQGNRFNHDPLRTR 82
>SSRP_BACAN (Q81XA8) SsrA-binding protein| Length = 155 Score = 28.9 bits (63), Expect = 3.9 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = +3 Query: 27 WQHNIXALHINXXQEGNQTXHSPLVTR 107 W HN +HI+ ++GN+ H PL TR Sbjct: 59 WVHN---MHISTYEQGNRFNHDPLRTR 82 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 23,744,810 Number of Sequences: 219361 Number of extensions: 300443 Number of successful extensions: 481 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 481 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 481 length of database: 80,573,946 effective HSP length: 43 effective length of database: 71,141,423 effective search space used: 1707394152 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
