ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd17g05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY625684.1| Triticum aestivum bHLH transcription factor (bHLH... 581 e-162
2gb|AY111157.1| Zea mays CL6102_1 mRNA sequence 303 4e-79
3gb|AY109226.1| Zea mays PCO075741 mRNA sequence 212 1e-51
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 117 5e-23
5dbj|AP001539.1| Oryza sativa (japonica cultivar-group) genomic D... 117 5e-23
6dbj|AK121013.1| Oryza sativa (japonica cultivar-group) cDNA clon... 117 5e-23
7dbj|AK064943.1| Oryza sativa (japonica cultivar-group) cDNA clon... 117 5e-23
8gb|AY625681.1| Oryza sativa (japonica cultivar-group) bHLH trans... 109 1e-20
9ref|NM_188664.1| Oryza sativa (japonica cultivar-group), Ozsa826... 109 1e-20
10ref|NM_117738.2| Arabidopsis thaliana DNA binding / transcriptio... 52 0.002
11ref|NM_197868.1| Oryza sativa (japonica cultivar-group) putative... 52 0.002
12gb|AY536428.1| Oryza sativa MYC protein mRNA, complete cds 52 0.002
13emb|Z97341.2|ATFCA6 Arabidopsis thaliana DNA chromosome 4, ESSA ... 52 0.002
14emb|AL161544.2|ATCHRIV44 Arabidopsis thaliana DNA chromosome 4, ... 52 0.002
15gb|AF251688.1|AF251688 Arabidopsis thaliana putative transcripti... 52 0.002
16gb|AY057626.1| Arabidopsis thaliana AT4g16430/dl4240w mRNA, comp... 52 0.002
17gb|AF428368.1|AF428368 Arabidopsis thaliana AT4g16430/dl4240w mR... 52 0.002
18dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
19gb|AC060755.9|AC060755 Oryza sativa chromosome 10 BAC OSJNBa0003... 52 0.002
20gb|BT002301.1| Arabidopsis thaliana At4g16430/dl4240w mRNA, comp... 52 0.002
21gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 52 0.002
22ref|NM_191645.1| Oryza sativa (japonica cultivar-group), predic... 48 0.038
23dbj|AP003381.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.038
24dbj|AP003023.2| Oryza sativa (japonica cultivar-group) genomic D... 48 0.038
25dbj|AK064946.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.038
26gb|AF295804.1| Danio rerio rho coiled-coil associated kinase alp... 44 0.59
27ref|NM_174863.2| Danio rerio rho-associated, coiled-coil contain... 44 0.59
28gb|AE010369.1| Methanopyrus kandleri AV19 section 68 of 157 of t... 42 2.3
29gb|AC124987.9| Mus musculus chromosome 3, clone RP24-364E17, com... 42 2.3
30ref|XM_847915.1| PREDICTED: Canis familiaris similar to Protein ... 42 2.3
31ref|XM_850399.1| PREDICTED: Canis familiaris hypothetical protei... 42 2.3
32emb|AL513132.6| Human DNA sequence from clone RP11-460C6 on chro... 42 2.3
33emb|CR381643.18| Zebrafish DNA sequence from clone DKEY-39N1 in ... 42 2.3
34gb|AC161609.6| Mus musculus BAC clone RP23-139D15 from chromosom... 40 9.3
35gb|AY296060.1| Danio rerio Bcl9 mRNA, complete cds 40 9.3
36ref|XM_427821.1| PREDICTED: Gallus gallus similar to beta myosin... 40 9.3
37gb|AC129205.3| Mus musculus BAC clone RP24-235I5 from chromosome... 40 9.3
38emb|CR936241.17| Zebrafish DNA sequence from clone DKEY-18J18 in... 40 9.3
39gb|AC138400.12| Mus musculus chromosome 14, clone RP23-260C21, c... 40 9.3
40gb|AC146502.2| Danio rerio clone CH211-262M17, complete sequence 40 9.3
41gb|AC134901.4| Mus musculus BAC clone RP23-287E23 from chromosom... 40 9.3
42gb|AC124548.5| Mus musculus BAC clone RP23-276P11 from 18, compl... 40 9.3
43gb|AC115305.4| Mus musculus BAC clone RP24-372L1 from 18, comple... 40 9.3
44gb|AC144806.10| Medicago truncatula clone mth2-34h22, complete s... 40 9.3
45gb|AC009116.8| Homo sapiens chromosome 16 clone RP11-477D3, comp... 40 9.3
46dbj|AK030120.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 9.3
47ref|NM_001005604.1| Danio rerio Bcl9 (LOC449616), mRNA 40 9.3
48emb|AL929240.18| Mouse DNA sequence from clone RP23-245A10 on ch... 40 9.3
49emb|AL928883.19| Mouse DNA sequence from clone RP23-60E18 on chr... 40 9.3
50dbj|AP002456.3| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 9.3
51dbj|AP000796.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 9.3
52gb|BC108078.1| Danio rerio zgc:123333, mRNA (cDNA clone MGC:1233... 40 9.3
53gb|AC163039.6| Mus musculus BAC clone RP23-188J1 from chromosome... 40 9.3
54gb|AC102591.14| Mus musculus chromosome 3, clone RP23-336B10, co... 40 9.3
55ref|NM_001037388.1| Danio rerio zgc:123333 (zgc:123333), mRNA 40 9.3 
>gb|AY625684.1| Triticum aestivum bHLH transcription factor (bHLH94) mRNA, partial
           cds
          Length = 878

 Score =  581 bits (293), Expect = e-162
 Identities = 332/344 (96%), Gaps = 1/344 (0%)
 Strand = Plus / Minus

                                                                       
Query: 334 cgttccattgttgcctgtgagttttgactcccctacccggacgtccgcctcttcaaacgc 393
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 878 cgttccattgttgcctgtgagtttcgactcccctacccggacgtccgcctcttcaaacgc 819

                                                                       
Query: 394 ttcaaagaccttctttactggatggttctccaatggagacataactcgaacaagaacctc 453
           |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 818 ttcaaagaccttctttaccggatggttctccaatggagacataactcgaaccagaacctc 759

                                                                       
Query: 454 gtcttgcaccacctggatgtcaacctctggtctagggtgtcgctcccttggatccaccat 513
           |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||
Sbjct: 758 gtcttgcaccacctggatgtcaacctctggtctaggggctcgctcccttggatccaccat 699

                                                                       
Query: 514 accagactcaagaaatcgttctctctccgtctccatatctttgagcttcttctgaaggtc 573
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 accagactcaagaaatcgttctctctccgtctccatatctttgagcttcttctgaaggtc 639

                                                                       
Query: 574 agtgatgtatgctatagcatcgcccagcanggaggccttgtccatttttgagatgttggg 633
           ||||||||||||||| ||||||||||||| ||| |||||||||||||| |||||||||||
Sbjct: 638 agtgatgtatgctattgcatcgcccagcagggaagccttgtccattttcgagatgttggg 579

                                                       
Query: 634 cacaacagctctcaacgcgtagaacccgctggttgagcttctcc 677
           |||||| ||||||||||| ||||| |||||||||||||||||||
Sbjct: 578 cacaacggctctcaacgcatagaa-ccgctggttgagcttctcc 536
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>gb|AY111157.1| Zea mays CL6102_1 mRNA sequence
          Length = 745

 Score =  303 bits (153), Expect = 4e-79
 Identities = 322/378 (85%), Gaps = 3/378 (0%)
 Strand = Plus / Minus

                                                                       
Query: 247 gctcatggcgcgagacattgcagcgatcactttttccctcgtttgctgttcggagccagg 306
           |||||| |||||||||||||| || ||||| || |||||||||||||| || | ||||||
Sbjct: 382 gctcatcgcgcgagacattgccgctatcaccttctccctcgtttgctgctcagtgccagg 323

                                                                       
Query: 307 gcacttgatgatgaaggaatgcactaccgttccattgtt---gcctgtgagttttgactc 363
            |||||||||||||| ||||||||  |||| || |||||   ||  || |  ||||||||
Sbjct: 322 acacttgatgatgaaagaatgcaccgccgtcccgttgttattgctcgtcacctttgactc 263

                                                                       
Query: 364 ccctacccggacgtccgcctcttcaaacgcttcaaagaccttctttactggatggttctc 423
            ||||| ||||| || |||||||| |||||||  ||||||||||| ||||||||||||||
Sbjct: 262 gcctacacggacctctgcctcttcgaacgcttggaagaccttcttgactggatggttctc 203

                                                                       
Query: 424 caatggagacataactcgaacaagaacctcgtcttgcaccacctggatgtcaacctctgg 483
           || ||||||||| || ||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 202 cattggagacatcacacgaacaagaacctcgtcctgcaccacctggatgtccacctctgg 143

                                                                       
Query: 484 tctagggtgtcgctcccttggatccaccataccagactcaagaaatcgttctctctccgt 543
            |||||    ||||||||||| ||||||||||| ||||| |  |  | ||| ||||||||
Sbjct: 142 cctaggcgcccgctcccttgggtccaccatacccgactccaacagcctttccctctccgt 83

                                                                       
Query: 544 ctccatatctttgagcttcttctgaaggtcagtgatgtatgctatagcatcgcccagcan 603
           |||||| ||||||||||||||||| |||||||||||||| | ||| ||||||||||||| 
Sbjct: 82  ctccatctctttgagcttcttctggaggtcagtgatgtacgttatcgcatcgcccagcag 23

                             
Query: 604 ggaggccttgtccatttt 621
           ||| ||||||||||||||
Sbjct: 22  ggacgccttgtccatttt 5
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>gb|AY109226.1| Zea mays PCO075741 mRNA sequence
          Length = 705

 Score =  212 bits (107), Expect = 1e-51
 Identities = 306/373 (82%), Gaps = 6/373 (1%)
 Strand = Plus / Minus

                                                                       
Query: 247 gctcatggcgcgagacattgcagcgatcactttttccctcgtttgctgttcggagccagg 306
           |||||| || |||||||| || || ||||| || |||||||||||||| || | ||| ||
Sbjct: 384 gctcatcgcacgagacatcgccgctatcaccttctccctcgtttgctgctcagtgccggg 325

                                                                       
Query: 307 gcacttgatgatgaaggaatgcactaccgttccattgttg------cctgtgagttttga 360
            |||||||||||||| |||||||| || || || ||||||      || || |  |||||
Sbjct: 324 acacttgatgatgaaagaatgcaccactgtcccgttgttgttgttgcccgtcacctttga 265

                                                                       
Query: 361 ctcccctacccggacgtccgcctcttcaaacgcttcaaagaccttctttactggatggtt 420
           ||| || |  ||||| || |||||||| |||||||  ||||||||||| |||||||||||
Sbjct: 264 ctcgcccaggcggacttctgcctcttcgaacgcttggaagaccttcttgactggatggtt 205

                                                                       
Query: 421 ctccaatggagacataactcgaacaagaacctcgtcttgcaccacctggatgtcaacctc 480
           ||||| ||||||||| ||||| ||||| |||||||| ||||||||||| ||||| |||||
Sbjct: 204 ctccattggagacatcactcgtacaaggacctcgtcctgcaccacctgtatgtccacctc 145

                                                                       
Query: 481 tggtctagggtgtcgctcccttggatccaccataccagactcaagaaatcgttctctctc 540
            || |||||    ||||||||||| ||||||||||||||||| || |  | ||| |||||
Sbjct: 144 cggcctaggcgcacgctcccttgggtccaccataccagactccaggagcctttccctctc 85

                                                                       
Query: 541 cgtctccatatctttgagcttcttctgaaggtcagtgatgtatgctatagcatcgcccag 600
            |||||||| || || ||||||||||| |||||||||||||| | ||| |||||||||||
Sbjct: 84  tgtctccatctccttcagcttcttctggaggtcagtgatgtacgttatcgcatcgcccag 25

                        
Query: 601 canggaggccttg 613
           || ||| ||||||
Sbjct: 24  cagggacgccttg 12
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  117 bits (59), Expect = 5e-23
 Identities = 119/139 (85%)
 Strand = Plus / Plus

                                                                           
Query: 229     caaccgattctacactgagctcatggcgcgagacattgcagcgatcactttttccctcgt 288
               |||| |||||||| ||||| ||||  |||||||||| || || ||||| || ||||||||
Sbjct: 7494477 caactgattctaccctgagttcatcacgcgagacatggcggcaatcaccttctccctcgt 7494536

                                                                           
Query: 289     ttgctgttcggagccagggcacttgatgatgaaggaatgcactaccgttccattgttgcc 348
               ||||||||||| ||||||||||||||||||||| ||||||||  |||| || ||||||| 
Sbjct: 7494537 ttgctgttcggcgccagggcacttgatgatgaaagaatgcacggccgtgccgttgttgct 7494596

                                  
Query: 349     tgtgagttttgactcccct 367
               |||||  || |||||||||
Sbjct: 7494597 tgtgatcttcgactcccct 7494615



 Score =  109 bits (55), Expect = 1e-20
 Identities = 115/134 (85%), Gaps = 1/134 (0%)
 Strand = Plus / Plus

                                                                           
Query: 544     ctccatatctttgagcttcttctgaaggtcagtgatgtatgctatagcatcgcccagcan 603
               |||||| ||||||||||||||||| |||||||||||||||| ||| || || || || | 
Sbjct: 7494792 ctccatctctttgagcttcttctgtaggtcagtgatgtatgttatggcgtcaccaaggag 7494851

                                                                           
Query: 604     ggaggccttgtccatttttgagatgttgggcacaacagctctcaacgcgtagaacccgct 663
               ||| ||||||||||||||||| || ||||| ||||| |||||||  || |||||  ||||
Sbjct: 7494852 ggatgccttgtccatttttgatatattgggtacaacggctctcagtgcatagaa-tcgct 7494910

                             
Query: 664     ggttgagcttctcc 677
               ||||||||||||||
Sbjct: 7494911 ggttgagcttctcc 7494924



 Score = 48.1 bits (24), Expect = 0.038
 Identities = 66/79 (83%), Gaps = 1/79 (1%)
 Strand = Plus / Minus

                                                                            
Query: 599      agcanggaggccttgtccatttttgagatgttgggcacaacagctctcaacgcgtagaac 658
                |||| ||| ||||||||||| || ||||| |||||||| || || | || ||||||||| 
Sbjct: 29265798 agcagggacgccttgtccatcttggagatcttgggcaccaccgcgcgcagcgcgtagaa- 29265740

                                   
Query: 659      ccgctggttgagcttctcc 677
                || |||||| |||||||||
Sbjct: 29265739 cctctggttcagcttctcc 29265721
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>dbj|AP001539.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0708G02
          Length = 168976

 Score =  117 bits (59), Expect = 5e-23
 Identities = 119/139 (85%)
 Strand = Plus / Plus

                                                                         
Query: 229   caaccgattctacactgagctcatggcgcgagacattgcagcgatcactttttccctcgt 288
             |||| |||||||| ||||| ||||  |||||||||| || || ||||| || ||||||||
Sbjct: 43269 caactgattctaccctgagttcatcacgcgagacatggcggcaatcaccttctccctcgt 43328

                                                                         
Query: 289   ttgctgttcggagccagggcacttgatgatgaaggaatgcactaccgttccattgttgcc 348
             ||||||||||| ||||||||||||||||||||| ||||||||  |||| || ||||||| 
Sbjct: 43329 ttgctgttcggcgccagggcacttgatgatgaaagaatgcacggccgtgccgttgttgct 43388

                                
Query: 349   tgtgagttttgactcccct 367
             |||||  || |||||||||
Sbjct: 43389 tgtgatcttcgactcccct 43407



 Score =  109 bits (55), Expect = 1e-20
 Identities = 115/134 (85%), Gaps = 1/134 (0%)
 Strand = Plus / Plus

                                                                         
Query: 544   ctccatatctttgagcttcttctgaaggtcagtgatgtatgctatagcatcgcccagcan 603
             |||||| ||||||||||||||||| |||||||||||||||| ||| || || || || | 
Sbjct: 43584 ctccatctctttgagcttcttctgtaggtcagtgatgtatgttatggcgtcaccaaggag 43643

                                                                         
Query: 604   ggaggccttgtccatttttgagatgttgggcacaacagctctcaacgcgtagaacccgct 663
             ||| ||||||||||||||||| || ||||| ||||| |||||||  || |||||  ||||
Sbjct: 43644 ggatgccttgtccatttttgatatattgggtacaacggctctcagtgcatagaa-tcgct 43702

                           
Query: 664   ggttgagcttctcc 677
             ||||||||||||||
Sbjct: 43703 ggttgagcttctcc 43716
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>dbj|AK121013.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047M20, full
            insert sequence
          Length = 2356

 Score =  117 bits (59), Expect = 5e-23
 Identities = 119/139 (85%)
 Strand = Plus / Minus

                                                                        
Query: 229  caaccgattctacactgagctcatggcgcgagacattgcagcgatcactttttccctcgt 288
            |||| |||||||| ||||| ||||  |||||||||| || || ||||| || ||||||||
Sbjct: 2000 caactgattctaccctgagttcatcacgcgagacatggcggcaatcaccttctccctcgt 1941

                                                                        
Query: 289  ttgctgttcggagccagggcacttgatgatgaaggaatgcactaccgttccattgttgcc 348
            ||||||||||| ||||||||||||||||||||| ||||||||  |||| || ||||||| 
Sbjct: 1940 ttgctgttcggcgccagggcacttgatgatgaaagaatgcacggccgtgccgttgttgct 1881

                               
Query: 349  tgtgagttttgactcccct 367
            |||||  || |||||||||
Sbjct: 1880 tgtgatcttcgactcccct 1862



 Score =  109 bits (55), Expect = 1e-20
 Identities = 115/134 (85%), Gaps = 1/134 (0%)
 Strand = Plus / Minus

                                                                        
Query: 544  ctccatatctttgagcttcttctgaaggtcagtgatgtatgctatagcatcgcccagcan 603
            |||||| ||||||||||||||||| |||||||||||||||| ||| || || || || | 
Sbjct: 1685 ctccatctctttgagcttcttctgtaggtcagtgatgtatgttatggcgtcaccaaggag 1626

                                                                        
Query: 604  ggaggccttgtccatttttgagatgttgggcacaacagctctcaacgcgtagaacccgct 663
            ||| ||||||||||||||||| || ||||| ||||| |||||||  || |||||  ||||
Sbjct: 1625 ggatgccttgtccatttttgatatattgggtacaacggctctcagtgcatagaa-tcgct 1567

                          
Query: 664  ggttgagcttctcc 677
            ||||||||||||||
Sbjct: 1566 ggttgagcttctcc 1553
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>dbj|AK064943.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000P13, full
            insert sequence
          Length = 2529

 Score =  117 bits (59), Expect = 5e-23
 Identities = 119/139 (85%)
 Strand = Plus / Minus

                                                                        
Query: 229  caaccgattctacactgagctcatggcgcgagacattgcagcgatcactttttccctcgt 288
            |||| |||||||| ||||| ||||  |||||||||| || || ||||| || ||||||||
Sbjct: 2173 caactgattctaccctgagttcatcacgcgagacatggcggcaatcaccttctccctcgt 2114

                                                                        
Query: 289  ttgctgttcggagccagggcacttgatgatgaaggaatgcactaccgttccattgttgcc 348
            ||||||||||| ||||||||||||||||||||| ||||||||  |||| || ||||||| 
Sbjct: 2113 ttgctgttcggcgccagggcacttgatgatgaaagaatgcacggccgtgccgttgttgct 2054

                               
Query: 349  tgtgagttttgactcccct 367
            |||||  || |||||||||
Sbjct: 2053 tgtgatcttcgactcccct 2035



 Score =  109 bits (55), Expect = 1e-20
 Identities = 115/134 (85%), Gaps = 1/134 (0%)
 Strand = Plus / Minus

                                                                        
Query: 544  ctccatatctttgagcttcttctgaaggtcagtgatgtatgctatagcatcgcccagcan 603
            |||||| ||||||||||||||||| |||||||||||||||| ||| || || || || | 
Sbjct: 1858 ctccatctctttgagcttcttctgtaggtcagtgatgtatgttatggcgtcaccaaggag 1799

                                                                        
Query: 604  ggaggccttgtccatttttgagatgttgggcacaacagctctcaacgcgtagaacccgct 663
            ||| ||||||||||||||||| || ||||| ||||| |||||||  || |||||  ||||
Sbjct: 1798 ggatgccttgtccatttttgatatattgggtacaacggctctcagtgcatagaa-tcgct 1740

                          
Query: 664  ggttgagcttctcc 677
            ||||||||||||||
Sbjct: 1739 ggttgagcttctcc 1726
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>gb|AY625681.1| Oryza sativa (japonica cultivar-group) bHLH transcription factor
           (bHLH66) gene, partial cds
          Length = 936

 Score =  109 bits (55), Expect = 1e-20
 Identities = 115/134 (85%), Gaps = 1/134 (0%)
 Strand = Plus / Minus

                                                                       
Query: 544 ctccatatctttgagcttcttctgaaggtcagtgatgtatgctatagcatcgcccagcan 603
           |||||| ||||||||||||||||| |||||||||||||||| ||| || || || || | 
Sbjct: 672 ctccatctctttgagcttcttctgtaggtcagtgatgtatgttatggcgtcaccaaggag 613

                                                                       
Query: 604 ggaggccttgtccatttttgagatgttgggcacaacagctctcaacgcgtagaacccgct 663
           ||| ||||||||||||||||| || ||||| ||||| |||||||  || |||||  ||||
Sbjct: 612 ggatgccttgtccatttttgatatattgggtacaacggctctcagtgcatagaa-tcgct 554

                         
Query: 664 ggttgagcttctcc 677
           ||||||||||||||
Sbjct: 553 ggttgagcttctcc 540



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 77/87 (88%)
 Strand = Plus / Minus

                                                                       
Query: 281 tccctcgtttgctgttcggagccagggcacttgatgatgaaggaatgcactaccgttcca 340
           ||||||||||||||||||| ||||||||||||||||||||| ||||||||  |||| || 
Sbjct: 935 tccctcgtttgctgttcggcgccagggcacttgatgatgaaagaatgcacggccgtgccg 876

                                      
Query: 341 ttgttgcctgtgagttttgactcccct 367
           ||||||| |||||  || |||||||||
Sbjct: 875 ttgttgcttgtgatcttcgactcccct 849
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>ref|NM_188664.1| Oryza sativa (japonica cultivar-group), Ozsa8267 predicted mRNA
          Length = 1821

 Score =  109 bits (55), Expect = 1e-20
 Identities = 115/134 (85%), Gaps = 1/134 (0%)
 Strand = Plus / Minus

                                                                        
Query: 544  ctccatatctttgagcttcttctgaaggtcagtgatgtatgctatagcatcgcccagcan 603
            |||||| ||||||||||||||||| |||||||||||||||| ||| || || || || | 
Sbjct: 1383 ctccatctctttgagcttcttctgtaggtcagtgatgtatgttatggcgtcaccaaggag 1324

                                                                        
Query: 604  ggaggccttgtccatttttgagatgttgggcacaacagctctcaacgcgtagaacccgct 663
            ||| ||||||||||||||||| || ||||| ||||| |||||||  || |||||  ||||
Sbjct: 1323 ggatgccttgtccatttttgatatattgggtacaacggctctcagtgcatagaa-tcgct 1265

                          
Query: 664  ggttgagcttctcc 677
            ||||||||||||||
Sbjct: 1264 ggttgagcttctcc 1251



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 77/87 (88%)
 Strand = Plus / Minus

                                                                        
Query: 281  tccctcgtttgctgttcggagccagggcacttgatgatgaaggaatgcactaccgttcca 340
            ||||||||||||||||||| ||||||||||||||||||||| ||||||||  |||| || 
Sbjct: 1646 tccctcgtttgctgttcggcgccagggcacttgatgatgaaagaatgcacggccgtgccg 1587

                                       
Query: 341  ttgttgcctgtgagttttgactcccct 367
            ||||||| |||||  || |||||||||
Sbjct: 1586 ttgttgcttgtgatcttcgactcccct 1560
to top
>ref|NM_117738.2| Arabidopsis thaliana DNA binding / transcription factor AT4G16430
            mRNA, complete cds
          Length = 1798

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                              
Query: 608  gccttgtccatttttgagatgttgggcacaacagctctcaacgcgtagaa 657
            ||||||||||| || |||||||| ||||| || |||||||| ||||||||
Sbjct: 1273 gccttgtccatcttggagatgttaggcaccaccgctctcaaagcgtagaa 1224
to top
>ref|NM_197868.1| Oryza sativa (japonica cultivar-group) putative MYC transcription
            factor (OSJNBa0003O19.20), mRNA
          Length = 2067

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 71/85 (83%), Gaps = 1/85 (1%)
 Strand = Plus / Minus

                                                                        
Query: 593  tcgcccagcanggaggccttgtccatttttgagatgttgggcacaacagctctcaacgcg 652
            ||||||||||  || ||||||||||| || || | ||||||||| || || | || ||||
Sbjct: 1649 tcgcccagcagcgacgccttgtccatcttggacacgttgggcaccacggcgcgcagcgcg 1590

                                     
Query: 653  tagaacccgctggttgagcttctcc 677
            |||||  ||||||||||||||||||
Sbjct: 1589 tagaa-gcgctggttgagcttctcc 1566
to top
>gb|AY536428.1| Oryza sativa MYC protein mRNA, complete cds
          Length = 2100

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 71/85 (83%), Gaps = 1/85 (1%)
 Strand = Plus / Minus

                                                                        
Query: 593  tcgcccagcanggaggccttgtccatttttgagatgttgggcacaacagctctcaacgcg 652
            ||||||||||  || ||||||||||| || || | ||||||||| || || | || ||||
Sbjct: 1682 tcgcccagcagcgacgccttgtccatcttggacacgttgggcaccacggcgcgcagcgcg 1623

                                     
Query: 653  tagaacccgctggttgagcttctcc 677
            |||||  ||||||||||||||||||
Sbjct: 1622 tagaa-gcgctggttgagcttctcc 1599
to top
>emb|Z97341.2|ATFCA6 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 6
          Length = 213788

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                               
Query: 608   gccttgtccatttttgagatgttgggcacaacagctctcaacgcgtagaa 657
             ||||||||||| || |||||||| ||||| || |||||||| ||||||||
Sbjct: 33155 gccttgtccatcttggagatgttaggcaccaccgctctcaaagcgtagaa 33106
to top
>emb|AL161544.2|ATCHRIV44 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 44
          Length = 198735

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                               
Query: 608   gccttgtccatttttgagatgttgggcacaacagctctcaacgcgtagaa 657
             ||||||||||| || |||||||| ||||| || |||||||| ||||||||
Sbjct: 11083 gccttgtccatcttggagatgttaggcaccaccgctctcaaagcgtagaa 11034
to top
>gb|AF251688.1|AF251688 Arabidopsis thaliana putative transcription factor BHLH3 (BHLH3)
            mRNA, complete cds
          Length = 1404

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                              
Query: 608  gccttgtccatttttgagatgttgggcacaacagctctcaacgcgtagaa 657
            ||||||||||| || |||||||| ||||| || |||||||| ||||||||
Sbjct: 1055 gccttgtccatcttggagatgttaggcaccaccgctctcaaagcgtagaa 1006
to top
>gb|AY057626.1| Arabidopsis thaliana AT4g16430/dl4240w mRNA, complete cds
          Length = 1792

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                              
Query: 608  gccttgtccatttttgagatgttgggcacaacagctctcaacgcgtagaa 657
            ||||||||||| || |||||||| ||||| || |||||||| ||||||||
Sbjct: 1273 gccttgtccatcttggagatgttaggcaccaccgctctcaaagcgtagaa 1224
to top
>gb|AF428368.1|AF428368 Arabidopsis thaliana AT4g16430/dl4240w mRNA, complete cds
          Length = 1788

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                              
Query: 608  gccttgtccatttttgagatgttgggcacaacagctctcaacgcgtagaa 657
            ||||||||||| || |||||||| ||||| || |||||||| ||||||||
Sbjct: 1267 gccttgtccatcttggagatgttaggcaccaccgctctcaaagcgtagaa 1218
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 71/85 (83%), Gaps = 1/85 (1%)
 Strand = Plus / Minus

                                                                            
Query: 593      tcgcccagcanggaggccttgtccatttttgagatgttgggcacaacagctctcaacgcg 652
                ||||||||||  || ||||||||||| || || | ||||||||| || || | || ||||
Sbjct: 22338980 tcgcccagcagcgacgccttgtccatcttggacacgttgggcaccacggcgcgcagcgcg 22338921

                                         
Query: 653      tagaacccgctggttgagcttctcc 677
                |||||  ||||||||||||||||||
Sbjct: 22338920 tagaa-gcgctggttgagcttctcc 22338897
to top
>gb|AC060755.9|AC060755 Oryza sativa chromosome 10 BAC OSJNBa0003O19 genomic sequence, complete
              sequence
          Length = 172427

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 71/85 (83%), Gaps = 1/85 (1%)
 Strand = Plus / Minus

                                                                          
Query: 593    tcgcccagcanggaggccttgtccatttttgagatgttgggcacaacagctctcaacgcg 652
              ||||||||||  || ||||||||||| || || | ||||||||| || || | || ||||
Sbjct: 156223 tcgcccagcagcgacgccttgtccatcttggacacgttgggcaccacggcgcgcagcgcg 156164

                                       
Query: 653    tagaacccgctggttgagcttctcc 677
              |||||  ||||||||||||||||||
Sbjct: 156163 tagaa-gcgctggttgagcttctcc 156140
to top
>gb|BT002301.1| Arabidopsis thaliana At4g16430/dl4240w mRNA, complete cds
          Length = 1404

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                              
Query: 608  gccttgtccatttttgagatgttgggcacaacagctctcaacgcgtagaa 657
            ||||||||||| || |||||||| ||||| || |||||||| ||||||||
Sbjct: 1055 gccttgtccatcttggagatgttaggcaccaccgctctcaaagcgtagaa 1006
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 71/85 (83%), Gaps = 1/85 (1%)
 Strand = Plus / Minus

                                                                            
Query: 593      tcgcccagcanggaggccttgtccatttttgagatgttgggcacaacagctctcaacgcg 652
                ||||||||||  || ||||||||||| || || | ||||||||| || || | || ||||
Sbjct: 22351048 tcgcccagcagcgacgccttgtccatcttggacacgttgggcaccacggcgcgcagcgcg 22350989

                                         
Query: 653      tagaacccgctggttgagcttctcc 677
                |||||  ||||||||||||||||||
Sbjct: 22350988 tagaa-gcgctggttgagcttctcc 22350965
to top
>ref|NM_191645.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2058

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 66/79 (83%), Gaps = 1/79 (1%)
 Strand = Plus / Minus

                                                                        
Query: 599  agcanggaggccttgtccatttttgagatgttgggcacaacagctctcaacgcgtagaac 658
            |||| ||| ||||||||||| || ||||| |||||||| || || | || ||||||||| 
Sbjct: 1085 agcagggacgccttgtccatcttggagatcttgggcaccaccgcgcgcagcgcgtagaa- 1027

                               
Query: 659  ccgctggttgagcttctcc 677
            || |||||| |||||||||
Sbjct: 1026 cctctggttcagcttctcc 1008
to top
>dbj|AP003381.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0692C11
          Length = 169562

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 66/79 (83%), Gaps = 1/79 (1%)
 Strand = Plus / Minus

                                                                         
Query: 599   agcanggaggccttgtccatttttgagatgttgggcacaacagctctcaacgcgtagaac 658
             |||| ||| ||||||||||| || ||||| |||||||| || || | || ||||||||| 
Sbjct: 44661 agcagggacgccttgtccatcttggagatcttgggcaccaccgcgcgcagcgcgtagaa- 44603

                                
Query: 659   ccgctggttgagcttctcc 677
             || |||||| |||||||||
Sbjct: 44602 cctctggttcagcttctcc 44584
to top
>dbj|AP003023.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0684B02
          Length = 132470

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 66/79 (83%), Gaps = 1/79 (1%)
 Strand = Plus / Minus

                                                                          
Query: 599    agcanggaggccttgtccatttttgagatgttgggcacaacagctctcaacgcgtagaac 658
              |||| ||| ||||||||||| || ||||| |||||||| || || | || ||||||||| 
Sbjct: 111585 agcagggacgccttgtccatcttggagatcttgggcaccaccgcgcgcagcgcgtagaa- 111527

                                 
Query: 659    ccgctggttgagcttctcc 677
              || |||||| |||||||||
Sbjct: 111526 cctctggttcagcttctcc 111508
to top
>dbj|AK064946.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000P16, full
            insert sequence
          Length = 1980

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 66/79 (83%), Gaps = 1/79 (1%)
 Strand = Plus / Minus

                                                                        
Query: 599  agcanggaggccttgtccatttttgagatgttgggcacaacagctctcaacgcgtagaac 658
            |||| ||| ||||||||||| || ||||| |||||||| || || | || ||||||||| 
Sbjct: 1346 agcagggacgccttgtccatcttggagatcttgggcaccaccgcgcgcagcgcgtagaa- 1288

                               
Query: 659  ccgctggttgagcttctcc 677
            || |||||| |||||||||
Sbjct: 1287 cctctggttcagcttctcc 1269
to top
>gb|AF295804.1| Danio rerio rho coiled-coil associated kinase alpha mRNA, complete
            cds
          Length = 5447

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 537  tctccgtctccatatctttgagcttcttctgaag 570
            ||||| ||||||||||| ||||||||| ||||||
Sbjct: 2102 tctccttctccatatctgtgagcttctcctgaag 2069
to top
>ref|NM_174863.2| Danio rerio rho-associated, coiled-coil containing protein kinase 2
            (rock2), mRNA
          Length = 5447

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 537  tctccgtctccatatctttgagcttcttctgaag 570
            ||||| ||||||||||| ||||||||| ||||||
Sbjct: 2102 tctccttctccatatctgtgagcttctcctgaag 2069
to top
>gb|AE010369.1| Methanopyrus kandleri AV19 section 68 of 157 of the complete genome
          Length = 10175

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 543  tctccatatctttgagcttcttctg 567
            ||||| |||||||||||||||||||
Sbjct: 3489 tctccctatctttgagcttcttctg 3465
to top
>gb|AC124987.9| Mus musculus chromosome 3, clone RP24-364E17, complete sequence
          Length = 165330

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 292   ctgttcggagccagggcactt 312
             |||||||||||||||||||||
Sbjct: 41544 ctgttcggagccagggcactt 41564
to top
>ref|XM_847915.1| PREDICTED: Canis familiaris similar to Protein C5orf5 (GAP-like
            protein N61) (LOC610414), mRNA
          Length = 2307

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 143  tatcaacagaatggaaggttt 163
            |||||||||||||||||||||
Sbjct: 2224 tatcaacagaatggaaggttt 2244
to top
>ref|XM_850399.1| PREDICTED: Canis familiaris hypothetical protein LOC612665
           (LOC612665), mRNA
          Length = 1184

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 448 aacctcgtcttgcaccacctggatg 472
           |||||||| ||||||||||||||||
Sbjct: 369 aacctcgtattgcaccacctggatg 345
to top
>emb|AL513132.6| Human DNA sequence from clone RP11-460C6 on chromosome 9 Contains a
             malic enzyme pseudogene, complete sequence
          Length = 180296

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 83    tgtgcttttcttgcattgcta 103
             |||||||||||||||||||||
Sbjct: 14041 tgtgcttttcttgcattgcta 14061
to top
>emb|CR381643.18| Zebrafish DNA sequence from clone DKEY-39N1 in linkage group 8,
             complete sequence
          Length = 217745

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 532   ttctctctccgtctccatatctttgagcttctt 564
             ||||||||| |||||||||||| || |||||||
Sbjct: 96201 ttctctctctgtctccatatctgtgtgcttctt 96169
to top
>gb|AC161609.6| Mus musculus BAC clone RP23-139D15 from chromosome 14, complete sequence
          Length = 219723

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 148    acagaatggaaggtttcagg 167
              ||||||||||||||||||||
Sbjct: 170471 acagaatggaaggtttcagg 170452
to top
>gb|AY296060.1| Danio rerio Bcl9 mRNA, complete cds
          Length = 4456

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 606 aggccttgtccatttttgag 625
           ||||||||||||||||||||
Sbjct: 298 aggccttgtccatttttgag 279
to top
>ref|XM_427821.1| PREDICTED: Gallus gallus similar to beta myosin heavy chain
           (LOC430265), partial mRNA
          Length = 408

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 551 tctttgagcttcttctgaag 570
           ||||||||||||||||||||
Sbjct: 401 tctttgagcttcttctgaag 382
to top
>gb|AC129205.3| Mus musculus BAC clone RP24-235I5 from chromosome 19, complete sequence
          Length = 165024

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 446    agaacctcgtcttgcaccac 465
              ||||||||||||||||||||
Sbjct: 100850 agaacctcgtcttgcaccac 100831
to top
>emb|CR936241.17| Zebrafish DNA sequence from clone DKEY-18J18 in linkage group 18,
             complete sequence
          Length = 100610

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 543   tctccatatctttgagcttcttctgaag 570
             ||||||||||| ||||||||| ||||||
Sbjct: 27068 tctccatatctgtgagcttctcctgaag 27095
to top
>gb|AC138400.12| Mus musculus chromosome 14, clone RP23-260C21, complete sequence
          Length = 213423

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 148   acagaatggaaggtttcagg 167
             ||||||||||||||||||||
Sbjct: 38694 acagaatggaaggtttcagg 38713
to top
>gb|AC146502.2| Danio rerio clone CH211-262M17, complete sequence
          Length = 134798

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    tcttccaataaaacatcaaa 34
             ||||||||||||||||||||
Sbjct: 11905 tcttccaataaaacatcaaa 11886
to top
>gb|AC134901.4| Mus musculus BAC clone RP23-287E23 from chromosome 18, complete
            sequence
          Length = 188224

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 78   tagcttgtgcttttcttgcattgc 101
            ||||||||||||||| ||||||||
Sbjct: 4670 tagcttgtgcttttcctgcattgc 4647
to top
>gb|AC124548.5| Mus musculus BAC clone RP23-276P11 from 18, complete sequence
          Length = 173805

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 78     tagcttgtgcttttcttgcattgc 101
              ||||||||||||||| ||||||||
Sbjct: 144127 tagcttgtgcttttcctgcattgc 144104
to top
>gb|AC115305.4| Mus musculus BAC clone RP24-372L1 from 18, complete sequence
          Length = 155389

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 140   ttctatcaacagaatggaaggttt 163
             ||||||||||| ||||||||||||
Sbjct: 97683 ttctatcaacaaaatggaaggttt 97706
to top
>gb|AC144806.10| Medicago truncatula clone mth2-34h22, complete sequence
          Length = 124550

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    tttagcttgtgcttttcttg 95
             ||||||||||||||||||||
Sbjct: 45278 tttagcttgtgcttttcttg 45297
to top
>gb|AC009116.8| Homo sapiens chromosome 16 clone RP11-477D3, complete sequence
          Length = 172533

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 509   accataccagactcaagaaa 528
             ||||||||||||||||||||
Sbjct: 84403 accataccagactcaagaaa 84384
to top
>dbj|AK030120.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
            library, clone:4932443G22 product:polycystic kidney
            disease 2-like 2, full insert sequence
          Length = 3658

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 140  ttctatcaacagaatggaaggttt 163
            ||||||||||| ||||||||||||
Sbjct: 3460 ttctatcaacaaaatggaaggttt 3437
to top
>ref|NM_001005604.1| Danio rerio Bcl9 (LOC449616), mRNA
          Length = 4456

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 606 aggccttgtccatttttgag 625
           ||||||||||||||||||||
Sbjct: 298 aggccttgtccatttttgag 279
to top
>emb|AL929240.18| Mouse DNA sequence from clone RP23-245A10 on chromosome 2, complete
              sequence
          Length = 180092

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 556    gagcttcttctgaaggtcag 575
              ||||||||||||||||||||
Sbjct: 124722 gagcttcttctgaaggtcag 124703
to top
>emb|AL928883.19| Mouse DNA sequence from clone RP23-60E18 on chromosome 2, complete
             sequence
          Length = 208470

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 463   cacctggatgtcaacctctggtct 486
             ||||| ||||||||||||||||||
Sbjct: 26916 caccttgatgtcaacctctggtct 26893
to top
>dbj|AP002456.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-956A8, complete
             sequence
          Length = 114109

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 32    aaaactacaaggagcacaagaacc 55
             ||||||| ||||||||||||||||
Sbjct: 11025 aaaactataaggagcacaagaacc 11048
to top
>dbj|AP000796.4| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-14D14, complete
             sequence
          Length = 102173

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 32    aaaactacaaggagcacaagaacc 55
             ||||||| ||||||||||||||||
Sbjct: 14258 aaaactataaggagcacaagaacc 14281
to top
>gb|BC108078.1| Danio rerio zgc:123333, mRNA (cDNA clone MGC:123333 IMAGE:7292748),
            complete cds
          Length = 1739

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 558  gcttcttctgaaggtcagtg 577
            ||||||||||||||||||||
Sbjct: 1604 gcttcttctgaaggtcagtg 1585
to top
>gb|AC163039.6| Mus musculus BAC clone RP23-188J1 from chromosome 14, complete sequence
          Length = 198538

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 148   acagaatggaaggtttcagg 167
             ||||||||||||||||||||
Sbjct: 26761 acagaatggaaggtttcagg 26742
to top
>gb|AC102591.14| Mus musculus chromosome 3, clone RP23-336B10, complete sequence
          Length = 216906

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 611   ttgtccatttttgagatgtt 630
             ||||||||||||||||||||
Sbjct: 57001 ttgtccatttttgagatgtt 56982
to top
>ref|NM_001037388.1| Danio rerio zgc:123333 (zgc:123333), mRNA
          Length = 1739

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 558  gcttcttctgaaggtcagtg 577
            ||||||||||||||||||||
Sbjct: 1604 gcttcttctgaaggtcagtg 1585


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,664,103
Number of Sequences: 3902068
Number of extensions: 5664103
Number of successful extensions: 105245
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 105059
Number of HSP's gapped (non-prelim): 176
length of query: 677
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 654
effective length of database: 17,143,297,704
effective search space: 11211716698416
effective search space used: 11211716698416
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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