Clone Name | rbasd17g04 |
---|---|
Clone Library Name | barley_pub |
>emb|AJ419775.1|HVU419775 Hordeum vulgare mRNA for glutathione-S-transferase I subunit (gstI gene) Length = 895 Score = 285 bits (144), Expect = 2e-74 Identities = 161/166 (96%), Gaps = 1/166 (0%) Strand = Plus / Minus Query: 1 aaaggcacacatcgggggtgncacacctnggcttatttcgacgaacaagccccagaaact 60 ||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||| Sbjct: 780 aaaggcacacatcgggg-tgacacacctcggcttatttcgacgaacaagccccagaaact 722 Query: 61 aagatcatggctgcatcagcgcagcgaccttctggacggacggcctcgtcagcaggtcag 120 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 721 aagatcatggcttcatcagcgcagcgaccttctggacggacggcctcgtcagcaggtcag 662 Query: 121 tccaccaggccttcacatgcgggtaagcgtcaaacagagatgcata 166 ||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 661 tccaccaggccttcacatgcgggtaagcgtcgaacagagatgcata 616
>gb|BT009505.1| Triticum aestivum clone wr1.pk0088.e4:fis, full insert mRNA sequence Length = 1583 Score = 220 bits (111), Expect = 1e-54 Identities = 148/160 (92%), Gaps = 2/160 (1%) Strand = Plus / Minus Query: 3 aggcacacatcgggggtgncacacctnggcttatttcg--acgaacaagccccagaaact 60 |||||||||||||||| ||||||| ||||||||||| |||||| ||| ||||||||| Sbjct: 1421 aggcacacatcgggggaaacacacctcggcttatttcgcgacgaacgagcgccagaaact 1362 Query: 61 aagatcatggctgcatcagcgcagcgaccttctggacggacggcctcgtcagcaggtcag 120 |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1361 aagatcatggcttcatcagcgcagcgaccttctggacggacggcctcgccagcaggtcag 1302 Query: 121 tccaccaggccttcacatgcgggtaagcgtcaaacagaga 160 ||||||||||||||||||||||||| ||||| |||||||| Sbjct: 1301 tccaccaggccttcacatgcgggtacgcgtcgaacagaga 1262
>gb|BT009615.1| Triticum aestivum clone wre1n.pk0107.g10:fis, full insert mRNA sequence Length = 925 Score = 218 bits (110), Expect = 4e-54 Identities = 150/163 (92%), Gaps = 2/163 (1%) Strand = Plus / Minus Query: 3 aggcacacatcgggggtgncacacctnggcttatttcg--acgaacaagccccagaaact 60 ||||||||||| |||| | ||||||| ||||||||||| |||||| ||| ||||||||| Sbjct: 771 aggcacacatcaggggggacacacctcggcttatttcgcgacgaacgagcgccagaaact 712 Query: 61 aagatcatggctgcatcagcgcagcgaccttctggacggacggcctcgtcagcaggtcag 120 |||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 711 aagatcatggcttcatcagcgcagcgaccttctggacggacggcctcgccaacaggtcag 652 Query: 121 tccaccaggccttcacatgcgggtaagcgtcaaacagagatgc 163 ||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 651 tccaccaggccttcacatgcgggtacgcgtcgaacagagatgc 609
>gb|BT009482.1| Triticum aestivum clone wr1.pk0039.e11:fis, full insert mRNA sequence Length = 967 Score = 218 bits (110), Expect = 4e-54 Identities = 150/163 (92%), Gaps = 2/163 (1%) Strand = Plus / Plus Query: 3 aggcacacatcgggggtgncacacctnggcttatttcg--acgaacaagccccagaaact 60 ||||||||||| |||| | ||||||| ||||||||||| |||||| ||| ||||||||| Sbjct: 190 aggcacacatcaggggggacacacctcggcttatttcgcgacgaacgagcgccagaaact 249 Query: 61 aagatcatggctgcatcagcgcagcgaccttctggacggacggcctcgtcagcaggtcag 120 |||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 250 aagatcatggcttcatcagcgcagcgaccttctggacggacggcctcgccaacaggtcag 309 Query: 121 tccaccaggccttcacatgcgggtaagcgtcaaacagagatgc 163 ||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 310 tccaccaggccttcacatgcgggtacgcgtcgaacagagatgc 352
>gb|AF387085.1|AF387085 Triticum aestivum glutathione S-transferase mRNA, complete cds Length = 911 Score = 218 bits (110), Expect = 4e-54 Identities = 150/163 (92%), Gaps = 2/163 (1%) Strand = Plus / Minus Query: 3 aggcacacatcgggggtgncacacctnggcttatttcg--acgaacaagccccagaaact 60 ||||||||||| |||| | ||||||| ||||||||||| |||||| ||| ||||||||| Sbjct: 770 aggcacacatcaggggggacacacctcggcttatttcgcgacgaacgagcgccagaaact 711 Query: 61 aagatcatggctgcatcagcgcagcgaccttctggacggacggcctcgtcagcaggtcag 120 |||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 710 aagatcatggcttcatcagcgcagcgaccttctggacggacggcctcgccaacaggtcag 651 Query: 121 tccaccaggccttcacatgcgggtaagcgtcaaacagagatgc 163 ||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 650 tccaccaggccttcacatgcgggtacgcgtcgaacagagatgc 608
>gb|AF184059.1|AF184059 Triticum aestivum glutathione S-transferase (GST1) mRNA, complete cds Length = 914 Score = 218 bits (110), Expect = 4e-54 Identities = 150/163 (92%), Gaps = 2/163 (1%) Strand = Plus / Minus Query: 3 aggcacacatcgggggtgncacacctnggcttatttcg--acgaacaagccccagaaact 60 ||||||||||| |||| | ||||||| ||||||||||| |||||| ||| ||||||||| Sbjct: 764 aggcacacatcaggggggacacacctcggcttatttcgcgacgaacgagcgccagaaact 705 Query: 61 aagatcatggctgcatcagcgcagcgaccttctggacggacggcctcgtcagcaggtcag 120 |||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 704 aagatcatggcttcatcagcgcagcgaccttctggacggacggcctcgccaacaggtcag 645 Query: 121 tccaccaggccttcacatgcgggtaagcgtcaaacagagatgc 163 ||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 644 tccaccaggccttcacatgcgggtacgcgtcgaacagagatgc 602
>gb|BT009513.1| Triticum aestivum clone wr1.pk0098.b9:fis, full insert mRNA sequence Length = 929 Score = 200 bits (101), Expect = 9e-49 Identities = 150/166 (90%), Gaps = 2/166 (1%) Strand = Plus / Minus Query: 3 aggcacacatcgggggtgncacacctnggcttatttcg--acgaacaagccccagaaact 60 |||||||||||||||| ||||||| ||||||||||| |||||| ||| |||| || | Sbjct: 785 aggcacacatcggggggcacacacctcggcttatttcgcgacgaacgagcaccagcaatt 726 Query: 61 aagatcatggctgcatcagcgcagcgaccttctggacggacggcctcgtcagcaggtcag 120 |||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 725 aagatcatggcttcatcagcgctgcgaccttctggacggacggcctcgccagcaggtcag 666 Query: 121 tccaccaggccttcacatgcgggtaagcgtcaaacagagatgcata 166 ||||||||||||||||||||||||| ||||| |||||||| ||||| Sbjct: 665 tccaccaggccttcacatgcgggtacgcgtcgaacagagacgcata 620
>emb|AJ440796.1|TAE440796 Triticum aestivum mRNA for glutathione transferase F1 (gstf1 gene) Length = 927 Score = 200 bits (101), Expect = 9e-49 Identities = 150/166 (90%), Gaps = 2/166 (1%) Strand = Plus / Minus Query: 3 aggcacacatcgggggtgncacacctnggcttatttcg--acgaacaagccccagaaact 60 |||||||||||||||| ||||||| ||||||||||| |||||| ||| |||| || | Sbjct: 774 aggcacacatcggggggcacacacctcggcttatttcgcgacgaacgagcaccagcaatt 715 Query: 61 aagatcatggctgcatcagcgcagcgaccttctggacggacggcctcgtcagcaggtcag 120 |||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 714 aagatcatggcttcatcagcgctgcgaccttctggacggacggcctcgccagcaggtcag 655 Query: 121 tccaccaggccttcacatgcgggtaagcgtcaaacagagatgcata 166 ||||||||||||||||||||||||| ||||| |||||||| ||||| Sbjct: 654 tccaccaggccttcacatgcgggtacgcgtcgaacagagacgcata 609
>gb|DQ093362.1| Puccinellia tenuiflora glutathione S-transferase mRNA, partial cds Length = 201 Score = 107 bits (54), Expect = 1e-20 Identities = 90/102 (88%) Strand = Plus / Minus Query: 62 agatcatggctgcatcagcgcagcgaccttctggacggacggcctcgtcagcaggtcagt 121 |||| |||||| |||||| |||||||||||||||||||||||| ||| || ||||||||| Sbjct: 201 agatgatggcttcatcagtgcagcgaccttctggacggacggcttcgccaacaggtcagt 142 Query: 122 ccaccaggccttcacatgcgggtaagcgtcaaacagagatgc 163 ||||||||| |||||||| || || ||||| |||| |||||| Sbjct: 141 ccaccaggctttcacatgtggatatgcgtcgaacaaagatgc 100
>gb|BT017983.1| Zea mays clone EL01N0525D04.c mRNA sequence Length = 978 Score = 89.7 bits (45), Expect = 2e-15 Identities = 75/85 (88%) Strand = Plus / Minus Query: 67 atggctgcatcagcgcagcgaccttctggacggacggcctcgtcagcaggtcagtccacc 126 |||||| |||||| ||||||||||||||||| ||||||||| || ||| ||| ||||| Sbjct: 730 atggcttcatcagggcagcgaccttctggacagacggcctctccatcagaccagaccacc 671 Query: 127 aggccttcacatgcgggtaagcgtc 151 ||||||||||||||||||| ||||| Sbjct: 670 aggccttcacatgcgggtaggcgtc 646
>gb|BT009173.1| Triticum aestivum clone wl1n.pk0107.g3:fis, full insert mRNA sequence Length = 588 Score = 89.7 bits (45), Expect = 2e-15 Identities = 75/85 (88%) Strand = Plus / Minus Query: 67 atggctgcatcagcgcagcgaccttctggacggacggcctcgtcagcaggtcagtccacc 126 |||||| |||||| ||||||||||||||||| ||||||||| || ||| ||| ||||| Sbjct: 366 atggcttcatcagggcagcgaccttctggacagacggcctctccatcagaccagaccacc 307 Query: 127 aggccttcacatgcgggtaagcgtc 151 ||||||||||||||||||| ||||| Sbjct: 306 aggccttcacatgcgggtaggcgtc 282
>gb|BT009155.1| Triticum aestivum clone wl1n.pk0068.a8:fis, full insert mRNA sequence Length = 942 Score = 89.7 bits (45), Expect = 2e-15 Identities = 75/85 (88%) Strand = Plus / Minus Query: 67 atggctgcatcagcgcagcgaccttctggacggacggcctcgtcagcaggtcagtccacc 126 |||||| |||||| ||||||||||||||||| ||||||||| || ||| ||| ||||| Sbjct: 730 atggcttcatcagggcagcgaccttctggacagacggcctctccatcagaccagaccacc 671 Query: 127 aggccttcacatgcgggtaagcgtc 151 ||||||||||||||||||| ||||| Sbjct: 670 aggccttcacatgcgggtaggcgtc 646
>gb|BT009142.1| Triticum aestivum clone wl1n.pk0053.d10:fis, full insert mRNA sequence Length = 943 Score = 89.7 bits (45), Expect = 2e-15 Identities = 75/85 (88%) Strand = Plus / Minus Query: 67 atggctgcatcagcgcagcgaccttctggacggacggcctcgtcagcaggtcagtccacc 126 |||||| |||||| ||||||||||||||||| ||||||||| || ||| ||| ||||| Sbjct: 724 atggcttcatcagggcagcgaccttctggacagacggcctctccatcagaccagaccacc 665 Query: 127 aggccttcacatgcgggtaagcgtc 151 ||||||||||||||||||| ||||| Sbjct: 664 aggccttcacatgcgggtaggcgtc 640
>emb|X06754.1|ZMGST1 Maize mRNA for GSH gluthathione S-transferase I (GST;EC 2.5.1.18) Length = 929 Score = 89.7 bits (45), Expect = 2e-15 Identities = 75/85 (88%) Strand = Plus / Minus Query: 67 atggctgcatcagcgcagcgaccttctggacggacggcctcgtcagcaggtcagtccacc 126 |||||| |||||| ||||||||||||||||| ||||||||| || ||| ||| ||||| Sbjct: 718 atggcttcatcagggcagcgaccttctggacagacggcctctccatcagaccagaccacc 659 Query: 127 aggccttcacatgcgggtaagcgtc 151 ||||||||||||||||||| ||||| Sbjct: 658 aggccttcacatgcgggtaggcgtc 634
>gb|AY103561.1| Zea mays PCO151099 mRNA sequence Length = 971 Score = 89.7 bits (45), Expect = 2e-15 Identities = 75/85 (88%) Strand = Plus / Minus Query: 67 atggctgcatcagcgcagcgaccttctggacggacggcctcgtcagcaggtcagtccacc 126 |||||| |||||| ||||||||||||||||| ||||||||| || ||| ||| ||||| Sbjct: 728 atggcttcatcagggcagcgaccttctggacagacggcctctccatcagaccagaccacc 669 Query: 127 aggccttcacatgcgggtaagcgtc 151 ||||||||||||||||||| ||||| Sbjct: 668 aggccttcacatgcgggtaggcgtc 644
>gb|M16901.1|MZEGSTIB Maize glutathione S-transferase (GST-I) mRNA, complete cds Length = 727 Score = 83.8 bits (42), Expect = 2e-13 Identities = 74/85 (87%) Strand = Plus / Minus Query: 67 atggctgcatcagcgcagcgaccttctggacggacggcctcgtcagcaggtcagtccacc 126 |||||| |||||| ||||||||||||||||| ||||||||| || ||| ||| ||||| Sbjct: 655 atggcttcatcagggcagcgaccttctggacagacggcctctccatcagaccagaccacc 596 Query: 127 aggccttcacatgcgggtaagcgtc 151 | ||||||||||||||||| ||||| Sbjct: 595 angccttcacatgcgggtaggcgtc 571
>gb|M24889.1|SYNMZEA Artificial maize glutathione S-transferase gene, complete cds Length = 660 Score = 81.8 bits (41), Expect = 6e-13 Identities = 74/85 (87%) Strand = Plus / Minus Query: 67 atggctgcatcagcgcagcgaccttctggacggacggcctcgtcagcaggtcagtccacc 126 |||||| ||||| ||||||||||||||||| ||||||||| || ||| ||| ||||| Sbjct: 648 atggcttcatcaaggcagcgaccttctggacagacggcctctccatcagaccagaccacc 589 Query: 127 aggccttcacatgcgggtaagcgtc 151 ||||||||||||||||||| ||||| Sbjct: 588 aggccttcacatgcgggtaggcgtc 564
>gb|M16902.1|MZEGSTIA2 Maize glutathione S-transferase gene (GST-I), exons 2 and 3 Length = 1671 Score = 81.8 bits (41), Expect = 6e-13 Identities = 74/85 (87%) Strand = Plus / Minus Query: 67 atggctgcatcagcgcagcgaccttctggacggacggcctcgtcagcaggtcagtccacc 126 |||||| ||||| ||||||||||||||||| ||||||||| || ||| ||| ||||| Sbjct: 1393 atggcttcatcaaggcagcgaccttctggacagacggcctctccatcagaccagaccacc 1334 Query: 127 aggccttcacatgcgggtaagcgtc 151 ||||||||||||||||||| ||||| Sbjct: 1333 aggccttcacatgcgggtaggcgtc 1309
>ref|NM_191357.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 648 Score = 79.8 bits (40), Expect = 2e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 69 ggctgcatcagcgcagcgaccttctggacggacggcctcgtcagcaggtcagtccaccag 128 |||| |||||| | ||| ||||||||| |||||||| | || |||||||||||||||| Sbjct: 638 ggcttcatcagtgaagccaccttctgggaagacggccttgccatcaggtcagtccaccag 579 Query: 129 gccttcacatgcgggtaagcgtcaaaca 156 ||||||||||||||||| ||||| |||| Sbjct: 578 gccttcacatgcgggtatgcgtccaaca 551
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 79.8 bits (40), Expect = 2e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 69 ggctgcatcagcgcagcgaccttctggacggacggcctcgtcagcaggtcagtccaccag 128 |||| |||||| | ||| ||||||||| |||||||| | || |||||||||||||||| Sbjct: 32141667 ggcttcatcagtgaagccaccttctgggaagacggccttgccatcaggtcagtccaccag 32141726 Query: 129 gccttcacatgcgggtaagcgtcaaaca 156 ||||||||||||||||| ||||| |||| Sbjct: 32141727 gccttcacatgcgggtatgcgtccaaca 32141754 Score = 40.1 bits (20), Expect = 2.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 122 ccaccaggccttcacatgcgggtaagcgtcaaacag 157 |||||| ||||||||||| ||||| || |||||||| Sbjct: 15199099 ccaccaagccttcacatgagggtacgcatcaaacag 15199134
>dbj|AP003239.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0403C05 Length = 151085 Score = 79.8 bits (40), Expect = 2e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 69 ggctgcatcagcgcagcgaccttctggacggacggcctcgtcagcaggtcagtccaccag 128 |||| |||||| | ||| ||||||||| |||||||| | || |||||||||||||||| Sbjct: 12420 ggcttcatcagtgaagccaccttctgggaagacggccttgccatcaggtcagtccaccag 12479 Query: 129 gccttcacatgcgggtaagcgtcaaaca 156 ||||||||||||||||| ||||| |||| Sbjct: 12480 gccttcacatgcgggtatgcgtccaaca 12507
>dbj|AK099142.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023055F24, full insert sequence Length = 1064 Score = 79.8 bits (40), Expect = 2e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 69 ggctgcatcagcgcagcgaccttctggacggacggcctcgtcagcaggtcagtccaccag 128 |||| |||||| | ||| ||||||||| |||||||| | || |||||||||||||||| Sbjct: 814 ggcttcatcagtgaagccaccttctgggaagacggccttgccatcaggtcagtccaccag 755 Query: 129 gccttcacatgcgggtaagcgtcaaaca 156 ||||||||||||||||| ||||| |||| Sbjct: 754 gccttcacatgcgggtatgcgtccaaca 727
>dbj|AK059818.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-C06, full insert sequence Length = 1070 Score = 79.8 bits (40), Expect = 2e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 69 ggctgcatcagcgcagcgaccttctggacggacggcctcgtcagcaggtcagtccaccag 128 |||| |||||| | ||| ||||||||| |||||||| | || |||||||||||||||| Sbjct: 820 ggcttcatcagtgaagccaccttctgggaagacggccttgccatcaggtcagtccaccag 761 Query: 129 gccttcacatgcgggtaagcgtcaaaca 156 ||||||||||||||||| ||||| |||| Sbjct: 760 gccttcacatgcgggtatgcgtccaaca 733
>dbj|AK058894.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-E12, full insert sequence Length = 963 Score = 79.8 bits (40), Expect = 2e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 69 ggctgcatcagcgcagcgaccttctggacggacggcctcgtcagcaggtcagtccaccag 128 |||| |||||| | ||| ||||||||| |||||||| | || |||||||||||||||| Sbjct: 713 ggcttcatcagtgaagccaccttctgggaagacggccttgccatcaggtcagtccaccag 654 Query: 129 gccttcacatgcgggtaagcgtcaaaca 156 ||||||||||||||||| ||||| |||| Sbjct: 653 gccttcacatgcgggtatgcgtccaaca 626
>gb|AF062403.1|AF062403 Oryza sativa glutathione S-transferase II mRNA, complete cds Length = 1057 Score = 79.8 bits (40), Expect = 2e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 69 ggctgcatcagcgcagcgaccttctggacggacggcctcgtcagcaggtcagtccaccag 128 |||| |||||| | ||| ||||||||| |||||||| | || |||||||||||||||| Sbjct: 737 ggcttcatcagtgaagccaccttctgggaagacggccttgccatcaggtcagtccaccag 678 Query: 129 gccttcacatgcgggtaagcgtcaaaca 156 ||||||||||||||||| ||||| |||| Sbjct: 677 gccttcacatgcgggtatgcgtccaaca 650
>gb|AY553635.1| Cynodon dactylon glutathione s-transferase II mRNA, complete cds Length = 1004 Score = 63.9 bits (32), Expect = 1e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 68 tggctgcatcagcgcagcgaccttctggacggacggcctcgtcagcaggtcagtccacca 127 ||||| ||||||||| |||||| ||||| | || |||||| || |||| |||||||||| Sbjct: 707 tggcttcatcagcgctgcgaccctctgggctgatggcctctccatcaggccagtccacca 648 Query: 128 ggccttcacatg 139 |||||||||||| Sbjct: 647 ggccttcacatg 636
>gb|AY823546.1| Pennisetum glaucum glutathione S-transferase mRNA, complete cds Length = 1006 Score = 61.9 bits (31), Expect = 6e-07 Identities = 67/79 (84%) Strand = Plus / Minus Query: 67 atggctgcatcagcgcagcgaccttctggacggacggcctcgtcagcaggtcagtccacc 126 |||||| |||||| || || |||||||| ||||| |||||| || |||| || ||||| Sbjct: 734 atggcttcatcagagccgcaaccttctgaacggatggcctctccatcaggctagaccacc 675 Query: 127 aggccttcacatgcgggta 145 ||||||||||||||||||| Sbjct: 674 aggccttcacatgcgggta 656
>ref|NM_193830.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 657 Score = 40.1 bits (20), Expect = 2.0 Identities = 32/36 (88%) Strand = Plus / Minus Query: 122 ccaccaggccttcacatgcgggtaagcgtcaaacag 157 |||||| ||||||||||| ||||| || |||||||| Sbjct: 594 ccaccaagccttcacatgagggtacgcatcaaacag 559
>gb|AC150690.7| Bos taurus BAC CH240-151A24 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 194641 Score = 40.1 bits (20), Expect = 2.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 gaaactaagatcatggctgc 74 |||||||||||||||||||| Sbjct: 66598 gaaactaagatcatggctgc 66579
>gb|AC092727.2| Bos taurus clone RP42-351K5, complete sequence Length = 163604 Score = 40.1 bits (20), Expect = 2.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 aaactaagatcatggctgca 75 |||||||||||||||||||| Sbjct: 159257 aaactaagatcatggctgca 159276
>dbj|AP002914.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0493G01 Length = 167587 Score = 40.1 bits (20), Expect = 2.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 122 ccaccaggccttcacatgcgggtaagcgtcaaacag 157 |||||| ||||||||||| ||||| || |||||||| Sbjct: 52472 ccaccaagccttcacatgagggtacgcatcaaacag 52507
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 38.2 bits (19), Expect = 8.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 67 atggctgcatcagcgcagc 85 ||||||||||||||||||| Sbjct: 2949717 atggctgcatcagcgcagc 2949699
>emb|AL136528.11| Human DNA sequence from clone RP5-1092A11 on chromosome 1p36.2-36.33 Contains the 5' end of the gene for a novel protein (FLJ32825), a novel gene (KIAA0495), two novel genes, the TP73 gene for tumor protein p73, the 5' end of the WDR8 gene for WD repeat domain 8 and five CpG islands, complete sequence Length = 138941 Score = 38.2 bits (19), Expect = 8.1 Identities = 22/23 (95%) Strand = Plus / Plus Query: 98 ggacggcctcgtcagcaggtcag 120 ||||||| ||||||||||||||| Sbjct: 94686 ggacggcttcgtcagcaggtcag 94708 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 862,972 Number of Sequences: 3902068 Number of extensions: 862972 Number of successful extensions: 63389 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 34 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 63249 Number of HSP's gapped (non-prelim): 132 length of query: 166 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 144 effective length of database: 17,147,199,772 effective search space: 2469196767168 effective search space used: 2469196767168 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)