Clone Name | rbasd17g03 |
---|---|
Clone Library Name | barley_pub |
>GSTF1_MAIZE (P12653) Glutathione S-transferase I (EC 2.5.1.18) (GST-I) (GST-29)| (GST class-phi) Length = 213 Score = 68.9 bits (167), Expect = 3e-12 Identities = 30/36 (83%), Positives = 33/36 (91%) Frame = -1 Query: 270 ATPYASLFDAYPHVKAWWTDLLTRPSVQKVAALMKP 163 ATPYAS+ DAYPHVKAWW+ L+ RPSVQKVAALMKP Sbjct: 176 ATPYASVLDAYPHVKAWWSGLMERPSVQKVAALMKP 211
>GSTH2_ORYSA (O82451) Probable glutathione S-transferase GSTF2 (EC 2.5.1.18)| (GST-II) Length = 214 Score = 68.2 bits (165), Expect = 5e-12 Identities = 29/36 (80%), Positives = 33/36 (91%) Frame = -1 Query: 270 ATPYASLFDAYPHVKAWWTDLLTRPSVQKVAALMKP 163 ATP+AS+ DAYPHVKAWWTDL+ RPS QKVA+LMKP Sbjct: 177 ATPHASVLDAYPHVKAWWTDLMARPSSQKVASLMKP 212
>GSTH1_ORYSA (O65857) Probable glutathione S-transferase GSTF1 (EC 2.5.1.18)| (GST-I) Length = 219 Score = 62.8 bits (151), Expect = 2e-10 Identities = 26/35 (74%), Positives = 31/35 (88%) Frame = -1 Query: 267 TPYASLFDAYPHVKAWWTDLLTRPSVQKVAALMKP 163 TPYASLFD+YPHVKAWW L+ RPSV+K+AA+M P Sbjct: 182 TPYASLFDSYPHVKAWWERLMARPSVKKLAAVMAP 216
>GSTF2_WHEAT (P30111) Glutathione S-transferase 2 (EC 2.5.1.18) (GST class-phi)| Length = 291 Score = 48.5 bits (114), Expect = 4e-06 Identities = 20/33 (60%), Positives = 24/33 (72%) Frame = -1 Query: 267 TPYASLFDAYPHVKAWWTDLLTRPSVQKVAALM 169 TPYA +FD YP VKAWW L+ RP+VQ+V M Sbjct: 187 TPYAKVFDEYPKVKAWWEMLMARPAVQRVCKHM 219
>GSTF1_WHEAT (P30110) Glutathione S-transferase 1 (EC 2.5.1.18) (GST class-phi)| Length = 229 Score = 48.1 bits (113), Expect = 6e-06 Identities = 20/33 (60%), Positives = 24/33 (72%) Frame = -1 Query: 267 TPYASLFDAYPHVKAWWTDLLTRPSVQKVAALM 169 TPYA +FD YP VKAWW L+ RP+VQ+V M Sbjct: 187 TPYAKVFDDYPKVKAWWEMLMARPAVQRVCKHM 219
>GSTF4_MAIZE (P46420) Glutathione S-transferase IV (EC 2.5.1.18) (GST-IV)| (GST-27) (GST class-phi) Length = 222 Score = 43.5 bits (101), Expect = 1e-04 Identities = 19/34 (55%), Positives = 21/34 (61%) Frame = -1 Query: 270 ATPYASLFDAYPHVKAWWTDLLTRPSVQKVAALM 169 AT YA+L A PHV AWW L RP+ KVA M Sbjct: 178 ATEYAALVHALPHVSAWWQGLAARPAANKVAQFM 211
>GSTF1_ARATH (P42760) Glutathione S-transferase 1 (EC 2.5.1.18) (GST class-phi)| Length = 208 Score = 39.7 bits (91), Expect = 0.002 Identities = 17/29 (58%), Positives = 19/29 (65%) Frame = -1 Query: 267 TPYASLFDAYPHVKAWWTDLLTRPSVQKV 181 TP LFD PHV AW D+ +RPS QKV Sbjct: 179 TPTKKLFDERPHVSAWVADITSRPSAQKV 207
>GSTF_HYOMU (P46423) Glutathione S-transferase (EC 2.5.1.18) (GST class-phi)| (25 kDa auxin-binding protein) Length = 212 Score = 35.4 bits (80), Expect = 0.038 Identities = 15/28 (53%), Positives = 18/28 (64%) Frame = -1 Query: 267 TPYASLFDAYPHVKAWWTDLLTRPSVQK 184 T SLFD+ PHV AW D+L RP+ K Sbjct: 179 TKVKSLFDSRPHVSAWCADILARPAWSK 206
>GST11_ARATH (Q9SRY5) Glutathione S-transferase 11 (EC 2.5.1.18) (GST class-phi)| Length = 209 Score = 35.0 bits (79), Expect = 0.050 Identities = 15/29 (51%), Positives = 18/29 (62%) Frame = -1 Query: 267 TPYASLFDAYPHVKAWWTDLLTRPSVQKV 181 TP LF PHV AW D+ +RPS +KV Sbjct: 180 TPTKKLFAERPHVSAWVADITSRPSAKKV 208
>GSTF3_MAIZE (P04907) Glutathione S-transferase III (EC 2.5.1.18) (GST-III) (GST| class-phi) Length = 221 Score = 34.3 bits (77), Expect = 0.085 Identities = 16/28 (57%), Positives = 19/28 (67%), Gaps = 1/28 (3%) Frame = -1 Query: 243 AYPHVKAWWTDLLTRPSVQK-VAALMKP 163 A PHVKAWW + RP+ QK VAA+ P Sbjct: 187 ARPHVKAWWEAIAARPAFQKTVAAIPLP 214
>GSTF_SILCU (Q04522) Glutathione S-transferase (EC 2.5.1.18) (GST class-phi)| Length = 216 Score = 32.0 bits (71), Expect = 0.42 Identities = 15/34 (44%), Positives = 18/34 (52%) Frame = -1 Query: 267 TPYASLFDAYPHVKAWWTDLLTRPSVQKVAALMK 166 T LF+ HV AW +L RPS +K AL K Sbjct: 181 TQVKKLFEERAHVSAWCKKILARPSWEKTLALQK 214
>HEMN_PSEAE (P77915) Oxygen-independent coproporphyrinogen III oxidase (EC| 1.3.99.22) (Coproporphyrinogenase) (Coprogen oxidase) Length = 460 Score = 30.4 bits (67), Expect = 1.2 Identities = 15/47 (31%), Positives = 25/47 (53%) Frame = +1 Query: 52 LNIQHQDTSQEHTLGKAHIGGDTPRLISTNKPQKLRSWLHQRSDLLD 192 + I + S+E + + H GG TP +S + ++L S L +LLD Sbjct: 94 IEIVSRHLSREQVVEQLHFGGGTPTFLSPGQLRELMSQLRTHLNLLD 140
>MARK1_RAT (O08678) Serine/threonine-protein kinase MARK1 (EC 2.7.11.1)| (MAP/microtubule affinity-regulating kinase 1) Length = 793 Score = 29.6 bits (65), Expect = 2.1 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = +3 Query: 162 MASSAQRPSGRTASSAGQSTRPSHAGKRQTEMHRV 266 M++S+ +G T +SAG S RP H T H + Sbjct: 528 MSASSMSSTGSTVASAGPSARPRHQKSMSTSGHPI 562
>MARK1_MOUSE (Q8VHJ5) Serine/threonine-protein kinase MARK1 (EC 2.7.11.1)| (MAP/microtubule affinity-regulating kinase 1) (ELKL motif serine/threonine-protein kinase 3) Length = 795 Score = 29.6 bits (65), Expect = 2.1 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = +3 Query: 162 MASSAQRPSGRTASSAGQSTRPSHAGKRQTEMHRV 266 M++S+ +G T +SAG S RP H T H + Sbjct: 528 MSASSMSSAGSTVASAGPSARPRHQKSMSTSGHPI 562
>GSTF2_TOBAC (P46440) Glutathione S-transferase APIC (EC 2.5.1.18) (GST| class-phi) Length = 213 Score = 29.3 bits (64), Expect = 2.7 Identities = 11/26 (42%), Positives = 16/26 (61%) Frame = -1 Query: 270 ATPYASLFDAYPHVKAWWTDLLTRPS 193 +T +FD+ P V AW D+L RP+ Sbjct: 178 STKVKEVFDSRPRVSAWCADILARPA 203
>GSTF1_TOBAC (P30109) Glutathione S-transferase PARB (EC 2.5.1.18) (GST| class-phi) Length = 213 Score = 28.1 bits (61), Expect = 6.1 Identities = 10/20 (50%), Positives = 14/20 (70%) Frame = -1 Query: 252 LFDAYPHVKAWWTDLLTRPS 193 +FD+ P V AW D+L RP+ Sbjct: 184 VFDSRPRVSAWCADILARPA 203
>FRDB_HELPY (O06914) Fumarate reductase iron-sulfur protein (EC 1.3.99.1)| Length = 245 Score = 27.7 bits (60), Expect = 8.0 Identities = 13/41 (31%), Positives = 21/41 (51%) Frame = +1 Query: 148 QKLRSWLHQRSDLLDGRPRQQVSPPGLHMRVSVKQRCIGCG 270 +++ SW H + ++ RP ++V P V RCI CG Sbjct: 119 KRVESWAHSKEEVDITRPEKRVEPDEA-QEVFELDRCIECG 158
>DCMA_METS1 (P43387) Dichloromethane dehalogenase (EC 4.5.1.3) (DCM| dehalogenase) Length = 266 Score = 27.7 bits (60), Expect = 8.0 Identities = 10/27 (37%), Positives = 19/27 (70%) Frame = -1 Query: 255 SLFDAYPHVKAWWTDLLTRPSVQKVAA 175 S++D++P VKAW+ ++ R + V+A Sbjct: 188 SMWDSHPKVKAWFARMMDREHAKTVSA 214 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,049,647 Number of Sequences: 219361 Number of extensions: 732580 Number of successful extensions: 2120 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 2035 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2120 length of database: 80,573,946 effective HSP length: 65 effective length of database: 66,315,481 effective search space used: 1591571544 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)