Clone Name | rbasd17g03 |
---|---|
Clone Library Name | barley_pub |
>gb|BT009505.1| Triticum aestivum clone wr1.pk0088.e4:fis, full insert mRNA sequence Length = 1583 Score = 371 bits (187), Expect = e-100 Identities = 248/266 (93%), Gaps = 3/266 (1%) Strand = Plus / Minus Query: 5 ggaatgctcatttaagtacaagat-tcgacaggatcgcaagcacaagcctgaacattcaa 63 ||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 1515 ggaatgctcatttcagtacaagatctagacaggatcgcaagcacaagcctgaacattcaa 1456 Query: 64 caccaggacacatcacaagaacacacactaggaaaggcacacatcgggggtgacacacct 123 ||| |||| |||||||||||||||||||| ||| |||||||||||||||| |||||||| Sbjct: 1455 cacgaggagacatcacaagaacacacactcggacaggcacacatcgggggaaacacacct 1396 Query: 124 cggcttatttcg--acgaacaagccccagaaactaagatcatggcttcatcagcgcagcg 181 |||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 1395 cggcttatttcgcgacgaacgagcgccagaaactaagatcatggcttcatcagcgcagcg 1336 Query: 182 accttctggacggacggcctcgtcagcaggtcagtccaccaggccttcacatgcgggtaa 241 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1335 accttctggacggacggcctcgccagcaggtcagtccaccaggccttcacatgcgggtac 1276 Query: 242 gcgtcaaacagagatgcatagggtgt 267 ||||| |||||||| || |||||||| Sbjct: 1275 gcgtcgaacagagacgcgtagggtgt 1250
>emb|AJ419775.1|HVU419775 Hordeum vulgare mRNA for glutathione-S-transferase I subunit (gstI gene) Length = 895 Score = 371 bits (187), Expect = e-100 Identities = 258/271 (95%), Gaps = 8/271 (2%) Strand = Plus / Minus Query: 1 cacgggaatgctcatttaagtacaagattcgacag-gatcgcaagcacaagcctgaacat 59 ||||||| |||||||||||||||||||||||||| |||| |||||||| |||||| ||| Sbjct: 870 cacgggattgctcatttaagtacaagattcgacactgatc-caagcaca-gcctga-cat 814 Query: 60 tcaacaccaggacacatcacaagaacacacactaggaaaggcacacatcgggggtgacac 119 ||| |||||| |||||||||| ||||||||||||| ||||||||||||||||| |||||| Sbjct: 813 tca-caccagcacacatcaca-gaacacacactag-aaaggcacacatcgggg-tgacac 758 Query: 120 acctcggcttatttcgacgaacaagccccagaaactaagatcatggcttcatcagcgcag 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 757 acctcggcttatttcgacgaacaagccccagaaactaagatcatggcttcatcagcgcag 698 Query: 180 cgaccttctggacggacggcctcgtcagcaggtcagtccaccaggccttcacatgcgggt 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 697 cgaccttctggacggacggcctcgtcagcaggtcagtccaccaggccttcacatgcgggt 638 Query: 240 aagcgtcaaacagagatgcatagggtgtggc 270 ||||||| ||||||||||||||| ||||||| Sbjct: 637 aagcgtcgaacagagatgcatagagtgtggc 607
>gb|BT009615.1| Triticum aestivum clone wre1n.pk0107.g10:fis, full insert mRNA sequence Length = 925 Score = 369 bits (186), Expect = 3e-99 Identities = 246/265 (92%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 5 ggaatgctcatttaagtacaagattcgacaggatcgcaagcacaagcctgaacattcaac 64 ||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 864 ggaatgctcatttcagtacaagattagacaggatcgcaagcacaagcctgaacaatcaac 805 Query: 65 accaggacacatcacaagaacacacactaggaaaggcacacatcgggggtgacacacctc 124 || |||| |||||||||||||||||||| | | ||||||||||| |||| |||||||||| Sbjct: 804 acgaggagacatcacaagaacacacactcgtacaggcacacatcaggggggacacacctc 745 Query: 125 ggcttatttcg--acgaacaagccccagaaactaagatcatggcttcatcagcgcagcga 182 ||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 744 ggcttatttcgcgacgaacgagcgccagaaactaagatcatggcttcatcagcgcagcga 685 Query: 183 ccttctggacggacggcctcgtcagcaggtcagtccaccaggccttcacatgcgggtaag 242 ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| | Sbjct: 684 ccttctggacggacggcctcgccaacaggtcagtccaccaggccttcacatgcgggtacg 625 Query: 243 cgtcaaacagagatgcatagggtgt 267 |||| ||||||||||| |||||||| Sbjct: 624 cgtcgaacagagatgcgtagggtgt 600
>gb|BT009482.1| Triticum aestivum clone wr1.pk0039.e11:fis, full insert mRNA sequence Length = 967 Score = 369 bits (186), Expect = 3e-99 Identities = 246/265 (92%), Gaps = 2/265 (0%) Strand = Plus / Plus Query: 5 ggaatgctcatttaagtacaagattcgacaggatcgcaagcacaagcctgaacattcaac 64 ||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 97 ggaatgctcatttcagtacaagattagacaggatcgcaagcacaagcctgaacaatcaac 156 Query: 65 accaggacacatcacaagaacacacactaggaaaggcacacatcgggggtgacacacctc 124 || |||| |||||||||||||||||||| | | ||||||||||| |||| |||||||||| Sbjct: 157 acgaggagacatcacaagaacacacactcgtacaggcacacatcaggggggacacacctc 216 Query: 125 ggcttatttcg--acgaacaagccccagaaactaagatcatggcttcatcagcgcagcga 182 ||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 217 ggcttatttcgcgacgaacgagcgccagaaactaagatcatggcttcatcagcgcagcga 276 Query: 183 ccttctggacggacggcctcgtcagcaggtcagtccaccaggccttcacatgcgggtaag 242 ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| | Sbjct: 277 ccttctggacggacggcctcgccaacaggtcagtccaccaggccttcacatgcgggtacg 336 Query: 243 cgtcaaacagagatgcatagggtgt 267 |||| ||||||||||| |||||||| Sbjct: 337 cgtcgaacagagatgcgtagggtgt 361
>gb|AF387085.1|AF387085 Triticum aestivum glutathione S-transferase mRNA, complete cds Length = 911 Score = 369 bits (186), Expect = 3e-99 Identities = 246/265 (92%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 5 ggaatgctcatttaagtacaagattcgacaggatcgcaagcacaagcctgaacattcaac 64 ||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 863 ggaatgctcatttcagtacaagattagacaggatcgcaagcacaagcctgaacaatcaac 804 Query: 65 accaggacacatcacaagaacacacactaggaaaggcacacatcgggggtgacacacctc 124 || |||| |||||||||||||||||||| | | ||||||||||| |||| |||||||||| Sbjct: 803 acgaggagacatcacaagaacacacactcgtacaggcacacatcaggggggacacacctc 744 Query: 125 ggcttatttcg--acgaacaagccccagaaactaagatcatggcttcatcagcgcagcga 182 ||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 743 ggcttatttcgcgacgaacgagcgccagaaactaagatcatggcttcatcagcgcagcga 684 Query: 183 ccttctggacggacggcctcgtcagcaggtcagtccaccaggccttcacatgcgggtaag 242 ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| | Sbjct: 683 ccttctggacggacggcctcgccaacaggtcagtccaccaggccttcacatgcgggtacg 624 Query: 243 cgtcaaacagagatgcatagggtgt 267 |||| ||||||||||| |||||||| Sbjct: 623 cgtcgaacagagatgcgtagggtgt 599
>gb|AF184059.1|AF184059 Triticum aestivum glutathione S-transferase (GST1) mRNA, complete cds Length = 914 Score = 369 bits (186), Expect = 3e-99 Identities = 246/265 (92%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 5 ggaatgctcatttaagtacaagattcgacaggatcgcaagcacaagcctgaacattcaac 64 ||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 857 ggaatgctcatttcagtacaagattagacaggatcgcaagcacaagcctgaacaatcaac 798 Query: 65 accaggacacatcacaagaacacacactaggaaaggcacacatcgggggtgacacacctc 124 || |||| |||||||||||||||||||| | | ||||||||||| |||| |||||||||| Sbjct: 797 acgaggagacatcacaagaacacacactcgtacaggcacacatcaggggggacacacctc 738 Query: 125 ggcttatttcg--acgaacaagccccagaaactaagatcatggcttcatcagcgcagcga 182 ||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 737 ggcttatttcgcgacgaacgagcgccagaaactaagatcatggcttcatcagcgcagcga 678 Query: 183 ccttctggacggacggcctcgtcagcaggtcagtccaccaggccttcacatgcgggtaag 242 ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| | Sbjct: 677 ccttctggacggacggcctcgccaacaggtcagtccaccaggccttcacatgcgggtacg 618 Query: 243 cgtcaaacagagatgcatagggtgt 267 |||| ||||||||||| |||||||| Sbjct: 617 cgtcgaacagagatgcgtagggtgt 593
>gb|BT009513.1| Triticum aestivum clone wr1.pk0098.b9:fis, full insert mRNA sequence Length = 929 Score = 337 bits (170), Expect = 1e-89 Identities = 242/265 (91%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 5 ggaatgctcatttaagtacaagattcgacaggatcgcaagcacaagcctgaacattcaac 64 |||| |||||||| |||| ||||| |||||||||||||||||||||||||||||||||| Sbjct: 878 ggaacgctcatttcagtaaaagatgagacaggatcgcaagcacaagcctgaacattcaac 819 Query: 65 accaggacacatcacaagaacacacactaggaaaggcacacatcgggggtgacacacctc 124 || |||| |||||||||||||||||||| | | |||||||||||||||| ||||||||| Sbjct: 818 acgaggagacatcacaagaacacacactcgtacaggcacacatcggggggcacacacctc 759 Query: 125 ggcttatttcg--acgaacaagccccagaaactaagatcatggcttcatcagcgcagcga 182 ||||||||||| |||||| ||| |||| || ||||||||||||||||||||||| |||| Sbjct: 758 ggcttatttcgcgacgaacgagcaccagcaattaagatcatggcttcatcagcgctgcga 699 Query: 183 ccttctggacggacggcctcgtcagcaggtcagtccaccaggccttcacatgcgggtaag 242 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | Sbjct: 698 ccttctggacggacggcctcgccagcaggtcagtccaccaggccttcacatgcgggtacg 639 Query: 243 cgtcaaacagagatgcatagggtgt 267 |||| |||||||| ||||||||||| Sbjct: 638 cgtcgaacagagacgcatagggtgt 614
>emb|AJ440796.1|TAE440796 Triticum aestivum mRNA for glutathione transferase F1 (gstf1 gene) Length = 927 Score = 337 bits (170), Expect = 1e-89 Identities = 242/265 (91%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 5 ggaatgctcatttaagtacaagattcgacaggatcgcaagcacaagcctgaacattcaac 64 |||| |||||||| |||| ||||| |||||||||||||||||||||||||||||||||| Sbjct: 867 ggaacgctcatttcagtaaaagatgagacaggatcgcaagcacaagcctgaacattcaac 808 Query: 65 accaggacacatcacaagaacacacactaggaaaggcacacatcgggggtgacacacctc 124 || |||| |||||||||||||||||||| | | |||||||||||||||| ||||||||| Sbjct: 807 acgaggagacatcacaagaacacacactcgtacaggcacacatcggggggcacacacctc 748 Query: 125 ggcttatttcg--acgaacaagccccagaaactaagatcatggcttcatcagcgcagcga 182 ||||||||||| |||||| ||| |||| || ||||||||||||||||||||||| |||| Sbjct: 747 ggcttatttcgcgacgaacgagcaccagcaattaagatcatggcttcatcagcgctgcga 688 Query: 183 ccttctggacggacggcctcgtcagcaggtcagtccaccaggccttcacatgcgggtaag 242 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | Sbjct: 687 ccttctggacggacggcctcgccagcaggtcagtccaccaggccttcacatgcgggtacg 628 Query: 243 cgtcaaacagagatgcatagggtgt 267 |||| |||||||| ||||||||||| Sbjct: 627 cgtcgaacagagacgcatagggtgt 603
>gb|DQ093362.1| Puccinellia tenuiflora glutathione S-transferase mRNA, partial cds Length = 201 Score = 115 bits (58), Expect = 7e-23 Identities = 91/102 (89%) Strand = Plus / Minus Query: 157 agatcatggcttcatcagcgcagcgaccttctggacggacggcctcgtcagcaggtcagt 216 |||| ||||||||||||| |||||||||||||||||||||||| ||| || ||||||||| Sbjct: 201 agatgatggcttcatcagtgcagcgaccttctggacggacggcttcgccaacaggtcagt 142 Query: 217 ccaccaggccttcacatgcgggtaagcgtcaaacagagatgc 258 ||||||||| |||||||| || || ||||| |||| |||||| Sbjct: 141 ccaccaggctttcacatgtggatatgcgtcgaacaaagatgc 100
>gb|BT017983.1| Zea mays clone EL01N0525D04.c mRNA sequence Length = 978 Score = 101 bits (51), Expect = 1e-18 Identities = 90/103 (87%) Strand = Plus / Minus Query: 162 atggcttcatcagcgcagcgaccttctggacggacggcctcgtcagcaggtcagtccacc 221 ||||||||||||| ||||||||||||||||| ||||||||| || ||| ||| ||||| Sbjct: 730 atggcttcatcagggcagcgaccttctggacagacggcctctccatcagaccagaccacc 671 Query: 222 aggccttcacatgcgggtaagcgtcaaacagagatgcataggg 264 ||||||||||||||||||| ||||| | || |||||| ||||| Sbjct: 670 aggccttcacatgcgggtaggcgtcgagcacagatgcgtaggg 628
>gb|BT009173.1| Triticum aestivum clone wl1n.pk0107.g3:fis, full insert mRNA sequence Length = 588 Score = 101 bits (51), Expect = 1e-18 Identities = 90/103 (87%) Strand = Plus / Minus Query: 162 atggcttcatcagcgcagcgaccttctggacggacggcctcgtcagcaggtcagtccacc 221 ||||||||||||| ||||||||||||||||| ||||||||| || ||| ||| ||||| Sbjct: 366 atggcttcatcagggcagcgaccttctggacagacggcctctccatcagaccagaccacc 307 Query: 222 aggccttcacatgcgggtaagcgtcaaacagagatgcataggg 264 ||||||||||||||||||| ||||| | || |||||| ||||| Sbjct: 306 aggccttcacatgcgggtaggcgtcgagcacagatgcgtaggg 264
>gb|BT009155.1| Triticum aestivum clone wl1n.pk0068.a8:fis, full insert mRNA sequence Length = 942 Score = 101 bits (51), Expect = 1e-18 Identities = 90/103 (87%) Strand = Plus / Minus Query: 162 atggcttcatcagcgcagcgaccttctggacggacggcctcgtcagcaggtcagtccacc 221 ||||||||||||| ||||||||||||||||| ||||||||| || ||| ||| ||||| Sbjct: 730 atggcttcatcagggcagcgaccttctggacagacggcctctccatcagaccagaccacc 671 Query: 222 aggccttcacatgcgggtaagcgtcaaacagagatgcataggg 264 ||||||||||||||||||| ||||| | || |||||| ||||| Sbjct: 670 aggccttcacatgcgggtaggcgtcgagcacagatgcgtaggg 628
>gb|BT009142.1| Triticum aestivum clone wl1n.pk0053.d10:fis, full insert mRNA sequence Length = 943 Score = 101 bits (51), Expect = 1e-18 Identities = 90/103 (87%) Strand = Plus / Minus Query: 162 atggcttcatcagcgcagcgaccttctggacggacggcctcgtcagcaggtcagtccacc 221 ||||||||||||| ||||||||||||||||| ||||||||| || ||| ||| ||||| Sbjct: 724 atggcttcatcagggcagcgaccttctggacagacggcctctccatcagaccagaccacc 665 Query: 222 aggccttcacatgcgggtaagcgtcaaacagagatgcataggg 264 ||||||||||||||||||| ||||| | || |||||| ||||| Sbjct: 664 aggccttcacatgcgggtaggcgtcgagcacagatgcgtaggg 622
>emb|X06754.1|ZMGST1 Maize mRNA for GSH gluthathione S-transferase I (GST;EC 2.5.1.18) Length = 929 Score = 101 bits (51), Expect = 1e-18 Identities = 90/103 (87%) Strand = Plus / Minus Query: 162 atggcttcatcagcgcagcgaccttctggacggacggcctcgtcagcaggtcagtccacc 221 ||||||||||||| ||||||||||||||||| ||||||||| || ||| ||| ||||| Sbjct: 718 atggcttcatcagggcagcgaccttctggacagacggcctctccatcagaccagaccacc 659 Query: 222 aggccttcacatgcgggtaagcgtcaaacagagatgcataggg 264 ||||||||||||||||||| ||||| | || |||||| ||||| Sbjct: 658 aggccttcacatgcgggtaggcgtcgagcacagatgcgtaggg 616
>gb|AY103561.1| Zea mays PCO151099 mRNA sequence Length = 971 Score = 101 bits (51), Expect = 1e-18 Identities = 90/103 (87%) Strand = Plus / Minus Query: 162 atggcttcatcagcgcagcgaccttctggacggacggcctcgtcagcaggtcagtccacc 221 ||||||||||||| ||||||||||||||||| ||||||||| || ||| ||| ||||| Sbjct: 728 atggcttcatcagggcagcgaccttctggacagacggcctctccatcagaccagaccacc 669 Query: 222 aggccttcacatgcgggtaagcgtcaaacagagatgcataggg 264 ||||||||||||||||||| ||||| | || |||||| ||||| Sbjct: 668 aggccttcacatgcgggtaggcgtcgagcacagatgcgtaggg 626
>gb|M16901.1|MZEGSTIB Maize glutathione S-transferase (GST-I) mRNA, complete cds Length = 727 Score = 95.6 bits (48), Expect = 7e-17 Identities = 89/103 (86%) Strand = Plus / Minus Query: 162 atggcttcatcagcgcagcgaccttctggacggacggcctcgtcagcaggtcagtccacc 221 ||||||||||||| ||||||||||||||||| ||||||||| || ||| ||| ||||| Sbjct: 655 atggcttcatcagggcagcgaccttctggacagacggcctctccatcagaccagaccacc 596 Query: 222 aggccttcacatgcgggtaagcgtcaaacagagatgcataggg 264 | ||||||||||||||||| ||||| | || |||||| ||||| Sbjct: 595 angccttcacatgcgggtaggcgtcgagcacagatgcgtaggg 553
>gb|M24889.1|SYNMZEA Artificial maize glutathione S-transferase gene, complete cds Length = 660 Score = 93.7 bits (47), Expect = 3e-16 Identities = 89/103 (86%) Strand = Plus / Minus Query: 162 atggcttcatcagcgcagcgaccttctggacggacggcctcgtcagcaggtcagtccacc 221 |||||||||||| ||||||||||||||||| ||||||||| || ||| ||| ||||| Sbjct: 648 atggcttcatcaaggcagcgaccttctggacagacggcctctccatcagaccagaccacc 589 Query: 222 aggccttcacatgcgggtaagcgtcaaacagagatgcataggg 264 ||||||||||||||||||| ||||| | || |||||| ||||| Sbjct: 588 aggccttcacatgcgggtaggcgtcgagcacagatgcgtaggg 546
>gb|M16902.1|MZEGSTIA2 Maize glutathione S-transferase gene (GST-I), exons 2 and 3 Length = 1671 Score = 93.7 bits (47), Expect = 3e-16 Identities = 89/103 (86%) Strand = Plus / Minus Query: 162 atggcttcatcagcgcagcgaccttctggacggacggcctcgtcagcaggtcagtccacc 221 |||||||||||| ||||||||||||||||| ||||||||| || ||| ||| ||||| Sbjct: 1393 atggcttcatcaaggcagcgaccttctggacagacggcctctccatcagaccagaccacc 1334 Query: 222 aggccttcacatgcgggtaagcgtcaaacagagatgcataggg 264 ||||||||||||||||||| ||||| | || |||||| ||||| Sbjct: 1333 aggccttcacatgcgggtaggcgtcgagcacagatgcgtaggg 1291
>ref|NM_191357.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 648 Score = 87.7 bits (44), Expect = 2e-14 Identities = 77/88 (87%) Strand = Plus / Minus Query: 164 ggcttcatcagcgcagcgaccttctggacggacggcctcgtcagcaggtcagtccaccag 223 ||||||||||| | ||| ||||||||| |||||||| | || |||||||||||||||| Sbjct: 638 ggcttcatcagtgaagccaccttctgggaagacggccttgccatcaggtcagtccaccag 579 Query: 224 gccttcacatgcgggtaagcgtcaaaca 251 ||||||||||||||||| ||||| |||| Sbjct: 578 gccttcacatgcgggtatgcgtccaaca 551
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 87.7 bits (44), Expect = 2e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 164 ggcttcatcagcgcagcgaccttctggacggacggcctcgtcagcaggtcagtccaccag 223 ||||||||||| | ||| ||||||||| |||||||| | || |||||||||||||||| Sbjct: 32141667 ggcttcatcagtgaagccaccttctgggaagacggccttgccatcaggtcagtccaccag 32141726 Query: 224 gccttcacatgcgggtaagcgtcaaaca 251 ||||||||||||||||| ||||| |||| Sbjct: 32141727 gccttcacatgcgggtatgcgtccaaca 32141754 Score = 40.1 bits (20), Expect = 3.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 217 ccaccaggccttcacatgcgggtaagcgtcaaacag 252 |||||| ||||||||||| ||||| || |||||||| Sbjct: 15199099 ccaccaagccttcacatgagggtacgcatcaaacag 15199134
>dbj|AP003239.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0403C05 Length = 151085 Score = 87.7 bits (44), Expect = 2e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 164 ggcttcatcagcgcagcgaccttctggacggacggcctcgtcagcaggtcagtccaccag 223 ||||||||||| | ||| ||||||||| |||||||| | || |||||||||||||||| Sbjct: 12420 ggcttcatcagtgaagccaccttctgggaagacggccttgccatcaggtcagtccaccag 12479 Query: 224 gccttcacatgcgggtaagcgtcaaaca 251 ||||||||||||||||| ||||| |||| Sbjct: 12480 gccttcacatgcgggtatgcgtccaaca 12507
>dbj|AK099142.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023055F24, full insert sequence Length = 1064 Score = 87.7 bits (44), Expect = 2e-14 Identities = 77/88 (87%) Strand = Plus / Minus Query: 164 ggcttcatcagcgcagcgaccttctggacggacggcctcgtcagcaggtcagtccaccag 223 ||||||||||| | ||| ||||||||| |||||||| | || |||||||||||||||| Sbjct: 814 ggcttcatcagtgaagccaccttctgggaagacggccttgccatcaggtcagtccaccag 755 Query: 224 gccttcacatgcgggtaagcgtcaaaca 251 ||||||||||||||||| ||||| |||| Sbjct: 754 gccttcacatgcgggtatgcgtccaaca 727
>dbj|AK059818.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-C06, full insert sequence Length = 1070 Score = 87.7 bits (44), Expect = 2e-14 Identities = 77/88 (87%) Strand = Plus / Minus Query: 164 ggcttcatcagcgcagcgaccttctggacggacggcctcgtcagcaggtcagtccaccag 223 ||||||||||| | ||| ||||||||| |||||||| | || |||||||||||||||| Sbjct: 820 ggcttcatcagtgaagccaccttctgggaagacggccttgccatcaggtcagtccaccag 761 Query: 224 gccttcacatgcgggtaagcgtcaaaca 251 ||||||||||||||||| ||||| |||| Sbjct: 760 gccttcacatgcgggtatgcgtccaaca 733
>dbj|AK058894.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-E12, full insert sequence Length = 963 Score = 87.7 bits (44), Expect = 2e-14 Identities = 77/88 (87%) Strand = Plus / Minus Query: 164 ggcttcatcagcgcagcgaccttctggacggacggcctcgtcagcaggtcagtccaccag 223 ||||||||||| | ||| ||||||||| |||||||| | || |||||||||||||||| Sbjct: 713 ggcttcatcagtgaagccaccttctgggaagacggccttgccatcaggtcagtccaccag 654 Query: 224 gccttcacatgcgggtaagcgtcaaaca 251 ||||||||||||||||| ||||| |||| Sbjct: 653 gccttcacatgcgggtatgcgtccaaca 626
>gb|AF062403.1|AF062403 Oryza sativa glutathione S-transferase II mRNA, complete cds Length = 1057 Score = 87.7 bits (44), Expect = 2e-14 Identities = 77/88 (87%) Strand = Plus / Minus Query: 164 ggcttcatcagcgcagcgaccttctggacggacggcctcgtcagcaggtcagtccaccag 223 ||||||||||| | ||| ||||||||| |||||||| | || |||||||||||||||| Sbjct: 737 ggcttcatcagtgaagccaccttctgggaagacggccttgccatcaggtcagtccaccag 678 Query: 224 gccttcacatgcgggtaagcgtcaaaca 251 ||||||||||||||||| ||||| |||| Sbjct: 677 gccttcacatgcgggtatgcgtccaaca 650
>gb|AY553635.1| Cynodon dactylon glutathione s-transferase II mRNA, complete cds Length = 1004 Score = 71.9 bits (36), Expect = 1e-09 Identities = 63/72 (87%) Strand = Plus / Minus Query: 163 tggcttcatcagcgcagcgaccttctggacggacggcctcgtcagcaggtcagtccacca 222 ||||||||||||||| |||||| ||||| | || |||||| || |||| |||||||||| Sbjct: 707 tggcttcatcagcgctgcgaccctctgggctgatggcctctccatcaggccagtccacca 648 Query: 223 ggccttcacatg 234 |||||||||||| Sbjct: 647 ggccttcacatg 636
>gb|AY823546.1| Pennisetum glaucum glutathione S-transferase mRNA, complete cds Length = 1006 Score = 69.9 bits (35), Expect = 4e-09 Identities = 68/79 (86%) Strand = Plus / Minus Query: 162 atggcttcatcagcgcagcgaccttctggacggacggcctcgtcagcaggtcagtccacc 221 ||||||||||||| || || |||||||| ||||| |||||| || |||| || ||||| Sbjct: 734 atggcttcatcagagccgcaaccttctgaacggatggcctctccatcaggctagaccacc 675 Query: 222 aggccttcacatgcgggta 240 ||||||||||||||||||| Sbjct: 674 aggccttcacatgcgggta 656
>emb|AL391869.9| Human DNA sequence from clone RP11-168C9 on chromosome 10 Contains a novel gene, complete sequence Length = 152181 Score = 44.1 bits (22), Expect = 0.22 Identities = 22/22 (100%) Strand = Plus / Plus Query: 59 ttcaacaccaggacacatcaca 80 |||||||||||||||||||||| Sbjct: 132222 ttcaacaccaggacacatcaca 132243
>emb|AL672285.8| Mouse DNA sequence from clone RP23-45G5 on chromosome X, complete sequence Length = 164443 Score = 42.1 bits (21), Expect = 0.89 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 acaagcctgaacattcaacac 66 ||||||||||||||||||||| Sbjct: 120809 acaagcctgaacattcaacac 120789
>ref|NM_193830.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 657 Score = 40.1 bits (20), Expect = 3.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 217 ccaccaggccttcacatgcgggtaagcgtcaaacag 252 |||||| ||||||||||| ||||| || |||||||| Sbjct: 594 ccaccaagccttcacatgagggtacgcatcaaacag 559
>gb|AC110250.16| Mus musculus chromosome 1, clone RP23-260K6, complete sequence Length = 219359 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 gacacatcacaagaacacac 89 |||||||||||||||||||| Sbjct: 9679 gacacatcacaagaacacac 9660
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 acacatcacaagaacacaca 90 |||||||||||||||||||| Sbjct: 22917802 acacatcacaagaacacaca 22917783
>gb|AC136972.3| Oryza sativa chromosome 3 BAC OSJNBb0007E22 genomic sequence, complete sequence Length = 184783 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 acacatcacaagaacacaca 90 |||||||||||||||||||| Sbjct: 120332 acacatcacaagaacacaca 120313
>gb|AC120138.9| Mus musculus chromosome 1, clone RP23-283D3, complete sequence Length = 216381 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 gacacatcacaagaacacac 89 |||||||||||||||||||| Sbjct: 50251 gacacatcacaagaacacac 50270
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 acacatcacaagaacacaca 90 |||||||||||||||||||| Sbjct: 17021439 acacatcacaagaacacaca 17021420
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 acacatcacaagaacacaca 90 |||||||||||||||||||| Sbjct: 22910830 acacatcacaagaacacaca 22910811
>gb|AC069145.5|AC069145 Oryza sativa chromosome 10 BAC OSJNBb0094K03 genomic sequence, complete sequence Length = 135216 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 acacatcacaagaacacaca 90 |||||||||||||||||||| Sbjct: 61931 acacatcacaagaacacaca 61912
>dbj|AP002914.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0493G01 Length = 167587 Score = 40.1 bits (20), Expect = 3.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 217 ccaccaggccttcacatgcgggtaagcgtcaaacag 252 |||||| ||||||||||| ||||| || |||||||| Sbjct: 52472 ccaccaagccttcacatgagggtacgcatcaaacag 52507
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 acacatcacaagaacacaca 90 |||||||||||||||||||| Sbjct: 17030479 acacatcacaagaacacaca 17030460 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,791,603 Number of Sequences: 3902068 Number of extensions: 1791603 Number of successful extensions: 31591 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 40 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 31477 Number of HSP's gapped (non-prelim): 103 length of query: 270 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 248 effective length of database: 17,147,199,772 effective search space: 4252505543456 effective search space used: 4252505543456 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)