ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd17f22 |
|---|---|
| Clone Library Name | barley_pub |
>RL12_PRUAR (O50003) 60S ribosomal protein L12| Length = 166 Score = 110 bits (274), Expect(2) = 3e-45 Identities = 55/62 (88%), Positives = 58/62 (93%) Frame = -3 Query: 399 GNISLDDVIEIAKIMKTRSMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQTEIDDGEVE 220 G+ISLDDVIEIAKIMK RSMAKE+AGTVKEIL TCVSVGCTVDGKDPKDLQ EI DG+VE Sbjct: 103 GHISLDDVIEIAKIMKHRSMAKELAGTVKEILRTCVSVGCTVDGKDPKDLQQEIADGDVE 162 Query: 219 IP 214 IP Sbjct: 163 IP 164 Score = 91.3 bits (225), Expect(2) = 3e-45 Identities = 46/49 (93%), Positives = 48/49 (97%) Frame = -2 Query: 544 KGLRVTVKLTVQNRQAKVSVVPSAAALVIKSLKEPERDRKKVKNIKHNG 398 KGLRVTVKLTVQNRQAKVSVVPSAAALVIK+LKEPERDRKK KNIKH+G Sbjct: 55 KGLRVTVKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHSG 103
>RL12_ARATH (P50883) 60S ribosomal protein L12| Length = 166 Score = 107 bits (266), Expect(2) = 6e-45 Identities = 50/62 (80%), Positives = 57/62 (91%) Frame = -3 Query: 399 GNISLDDVIEIAKIMKTRSMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQTEIDDGEVE 220 GNIS DDV EIA+IM+ RS+AKE++GTV+EILGTCVSVGCTVDGKDPKD+Q EI DGEVE Sbjct: 103 GNISFDDVTEIARIMRPRSIAKELSGTVREILGTCVSVGCTVDGKDPKDIQQEIQDGEVE 162 Query: 219 IP 214 IP Sbjct: 163 IP 164 Score = 93.6 bits (231), Expect(2) = 6e-45 Identities = 47/49 (95%), Positives = 49/49 (100%) Frame = -2 Query: 544 KGLRVTVKLTVQNRQAKVSVVPSAAALVIKSLKEPERDRKKVKNIKHNG 398 KGLRVTVKLTVQNRQAKV+VVPSAAALVIK+LKEPERDRKKVKNIKHNG Sbjct: 55 KGLRVTVKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKVKNIKHNG 103
>RL12_SCHPO (O75000) 60S ribosomal protein L12| Length = 165 Score = 95.9 bits (237), Expect(2) = 6e-38 Identities = 42/62 (67%), Positives = 56/62 (90%) Frame = -3 Query: 399 GNISLDDVIEIAKIMKTRSMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQTEIDDGEVE 220 GN+SLD++IE+A+ M+ +S+AKE++GTVKEILGT SVGCTVDGK+P D+Q EID+GE+E Sbjct: 102 GNVSLDEIIEVARTMRFKSLAKELSGTVKEILGTAFSVGCTVDGKNPHDVQKEIDNGEIE 161 Query: 219 IP 214 IP Sbjct: 162 IP 163 Score = 81.3 bits (199), Expect(2) = 6e-38 Identities = 40/49 (81%), Positives = 45/49 (91%) Frame = -2 Query: 544 KGLRVTVKLTVQNRQAKVSVVPSAAALVIKSLKEPERDRKKVKNIKHNG 398 KGLRVTVKLT+QNRQA VSVVPSA+ALVIK+LKEP RDRKK KN+ H+G Sbjct: 54 KGLRVTVKLTIQNRQAAVSVVPSASALVIKALKEPARDRKKDKNVAHSG 102
>RL12_CHLRE (P50884) 60S ribosomal protein L12 (Fragment)| Length = 157 Score = 86.7 bits (213), Expect(2) = 1e-36 Identities = 42/49 (85%), Positives = 46/49 (93%) Frame = -2 Query: 544 KGLRVTVKLTVQNRQAKVSVVPSAAALVIKSLKEPERDRKKVKNIKHNG 398 KGLR+TVKLTVQNRQAK+SV+PSAAALVIK+LKEP RDRKK KNIKH G Sbjct: 46 KGLRITVKLTVQNRQAKISVIPSAAALVIKALKEPARDRKKEKNIKHTG 94 Score = 85.9 bits (211), Expect(2) = 1e-36 Identities = 38/64 (59%), Positives = 52/64 (81%) Frame = -3 Query: 399 GNISLDDVIEIAKIMKTRSMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQTEIDDGEVE 220 G++++ D+IEIA++M+ RS AK++A KEILGT VSVGC VDGKDP+D+ + IDDG +E Sbjct: 94 GSVTMSDIIEIARVMRPRSCAKDLANGCKEILGTAVSVGCKVDGKDPRDVISAIDDGAIE 153 Query: 219 IPSA 208 IP A Sbjct: 154 IPDA 157
>RL12_CAEEL (P61866) 60S ribosomal protein L12| Length = 165 Score = 81.6 bits (200), Expect(2) = 1e-33 Identities = 37/49 (75%), Positives = 44/49 (89%) Frame = -2 Query: 544 KGLRVTVKLTVQNRQAKVSVVPSAAALVIKSLKEPERDRKKVKNIKHNG 398 KGL+VT KLT+QNR AK+ VVPSAA+L++K LKEP RDRKKVKN+KHNG Sbjct: 54 KGLKVTCKLTIQNRVAKIDVVPSAASLIVKELKEPPRDRKKVKNVKHNG 102 Score = 80.9 bits (198), Expect(2) = 1e-33 Identities = 36/63 (57%), Positives = 52/63 (82%) Frame = -3 Query: 399 GNISLDDVIEIAKIMKTRSMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQTEIDDGEVE 220 G++++D +I+IA+IM+ RSMAK++ GTVKEILGT SVGCT+DG+ P D+ I +GE+E Sbjct: 102 GDLTVDTIIKIARIMRPRSMAKKLEGTVKEILGTAQSVGCTIDGQHPHDIIESIANGEIE 161 Query: 219 IPS 211 IP+ Sbjct: 162 IPA 164
>RL12_CAEBR (P61865) 60S ribosomal protein L12| Length = 165 Score = 81.6 bits (200), Expect(2) = 1e-33 Identities = 37/49 (75%), Positives = 44/49 (89%) Frame = -2 Query: 544 KGLRVTVKLTVQNRQAKVSVVPSAAALVIKSLKEPERDRKKVKNIKHNG 398 KGL+VT KLT+QNR AK+ VVPSAA+L++K LKEP RDRKKVKN+KHNG Sbjct: 54 KGLKVTCKLTIQNRVAKIDVVPSAASLIVKELKEPPRDRKKVKNVKHNG 102 Score = 80.9 bits (198), Expect(2) = 1e-33 Identities = 36/63 (57%), Positives = 52/63 (82%) Frame = -3 Query: 399 GNISLDDVIEIAKIMKTRSMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQTEIDDGEVE 220 G++++D +I+IA+IM+ RSMAK++ GTVKEILGT SVGCT+DG+ P D+ I +GE+E Sbjct: 102 GDLTVDTIIKIARIMRPRSMAKKLEGTVKEILGTAQSVGCTIDGQHPHDIIESIANGEIE 161 Query: 219 IPS 211 IP+ Sbjct: 162 IPA 164
>RL12_RAT (P23358) 60S ribosomal protein L12| Length = 165 Score = 84.3 bits (207), Expect(2) = 3e-33 Identities = 39/49 (79%), Positives = 46/49 (93%) Frame = -2 Query: 544 KGLRVTVKLTVQNRQAKVSVVPSAAALVIKSLKEPERDRKKVKNIKHNG 398 KGLR+TVKLT+QNRQA++ VVPSA+AL+IK+LKEP RDRKK KNIKHNG Sbjct: 54 KGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHNG 102 Score = 77.0 bits (188), Expect(2) = 3e-33 Identities = 33/64 (51%), Positives = 50/64 (78%) Frame = -3 Query: 399 GNISLDDVIEIAKIMKTRSMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQTEIDDGEVE 220 GNI+ D+++ IA+ M+ RS+A+E++GT+KEILGT SVGC VDG+ P D+ +I+ G VE Sbjct: 102 GNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVE 161 Query: 219 IPSA 208 P++ Sbjct: 162 CPAS 165
>RL12_MOUSE (P35979) 60S ribosomal protein L12| Length = 165 Score = 82.4 bits (202), Expect(2) = 1e-32 Identities = 38/49 (77%), Positives = 46/49 (93%) Frame = -2 Query: 544 KGLRVTVKLTVQNRQAKVSVVPSAAALVIKSLKEPERDRKKVKNIKHNG 398 KGLR+TVKLT+QNRQA++ VVPSA+AL+IK+LKEP RDRKK KNIKH+G Sbjct: 54 KGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSG 102 Score = 77.0 bits (188), Expect(2) = 1e-32 Identities = 33/64 (51%), Positives = 50/64 (78%) Frame = -3 Query: 399 GNISLDDVIEIAKIMKTRSMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQTEIDDGEVE 220 GNI+ D+++ IA+ M+ RS+A+E++GT+KEILGT SVGC VDG+ P D+ +I+ G VE Sbjct: 102 GNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVE 161 Query: 219 IPSA 208 P++ Sbjct: 162 CPAS 165
>RL12_HUMAN (P30050) 60S ribosomal protein L12| Length = 165 Score = 82.4 bits (202), Expect(2) = 1e-32 Identities = 38/49 (77%), Positives = 46/49 (93%) Frame = -2 Query: 544 KGLRVTVKLTVQNRQAKVSVVPSAAALVIKSLKEPERDRKKVKNIKHNG 398 KGLR+TVKLT+QNRQA++ VVPSA+AL+IK+LKEP RDRKK KNIKH+G Sbjct: 54 KGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSG 102 Score = 77.0 bits (188), Expect(2) = 1e-32 Identities = 33/64 (51%), Positives = 50/64 (78%) Frame = -3 Query: 399 GNISLDDVIEIAKIMKTRSMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQTEIDDGEVE 220 GNI+ D+++ IA+ M+ RS+A+E++GT+KEILGT SVGC VDG+ P D+ +I+ G VE Sbjct: 102 GNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVE 161 Query: 219 IPSA 208 P++ Sbjct: 162 CPAS 165
>RL12_BOVIN (P61284) 60S ribosomal protein L12| Length = 165 Score = 82.4 bits (202), Expect(2) = 1e-32 Identities = 38/49 (77%), Positives = 46/49 (93%) Frame = -2 Query: 544 KGLRVTVKLTVQNRQAKVSVVPSAAALVIKSLKEPERDRKKVKNIKHNG 398 KGLR+TVKLT+QNRQA++ VVPSA+AL+IK+LKEP RDRKK KNIKH+G Sbjct: 54 KGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSG 102 Score = 77.0 bits (188), Expect(2) = 1e-32 Identities = 33/64 (51%), Positives = 50/64 (78%) Frame = -3 Query: 399 GNISLDDVIEIAKIMKTRSMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQTEIDDGEVE 220 GNI+ D+++ IA+ M+ RS+A+E++GT+KEILGT SVGC VDG+ P D+ +I+ G VE Sbjct: 102 GNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVE 161 Query: 219 IPSA 208 P++ Sbjct: 162 CPAS 165
>RL12_CHILA (Q6QMZ7) 60S ribosomal protein L12| Length = 165 Score = 82.4 bits (202), Expect(2) = 6e-32 Identities = 38/49 (77%), Positives = 46/49 (93%) Frame = -2 Query: 544 KGLRVTVKLTVQNRQAKVSVVPSAAALVIKSLKEPERDRKKVKNIKHNG 398 KGLR+TVKLT+QNRQA++ VVPSA+AL+IK+LKEP RDRKK KNIKH+G Sbjct: 54 KGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSG 102 Score = 74.7 bits (182), Expect(2) = 6e-32 Identities = 32/64 (50%), Positives = 50/64 (78%) Frame = -3 Query: 399 GNISLDDVIEIAKIMKTRSMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQTEIDDGEVE 220 GNI+ D+++ IA+ M+ RS+A+E++GT+KEILGT SVGC VD + P D+ +I++G VE Sbjct: 102 GNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDNRHPHDIIDDINNGVVE 161 Query: 219 IPSA 208 P++ Sbjct: 162 CPAS 165
>RL12_NEUCR (Q9C285) 60S ribosomal protein L12| Length = 165 Score = 81.6 bits (200), Expect(2) = 3e-31 Identities = 40/48 (83%), Positives = 45/48 (93%) Frame = -2 Query: 544 KGLRVTVKLTVQNRQAKVSVVPSAAALVIKSLKEPERDRKKVKNIKHN 401 KGLRVTVKLT+QNRQA VSVVP+A+ALVI++LKEP RDRKK KNIKHN Sbjct: 54 KGLRVTVKLTIQNRQAAVSVVPTASALVIRALKEPPRDRKKEKNIKHN 101 Score = 73.2 bits (178), Expect(2) = 3e-31 Identities = 31/61 (50%), Positives = 46/61 (75%) Frame = -3 Query: 396 NISLDDVIEIAKIMKTRSMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQTEIDDGEVEI 217 ++S D+++EIA+ M+ +S +KE+ GTV E+LGT SVGC VDGK PK +Q I GE+++ Sbjct: 103 SVSFDEIVEIARTMRFKSFSKELKGTVLEVLGTAFSVGCQVDGKSPKAVQEAIHAGEIDV 162 Query: 216 P 214 P Sbjct: 163 P 163
>RL12_YEAST (P17079) 60S ribosomal protein L12 (L15) (YL23)| Length = 165 Score = 72.8 bits (177), Expect(2) = 1e-27 Identities = 34/49 (69%), Positives = 43/49 (87%) Frame = -2 Query: 544 KGLRVTVKLTVQNRQAKVSVVPSAAALVIKSLKEPERDRKKVKNIKHNG 398 KG++VTV+L +QNRQA SVVPSA++LVI +LKEP RDRKK KN+KH+G Sbjct: 54 KGIKVTVQLKIQNRQAAASVVPSASSLVITALKEPPRDRKKDKNVKHSG 102 Score = 69.7 bits (169), Expect(2) = 1e-27 Identities = 33/62 (53%), Positives = 44/62 (70%) Frame = -3 Query: 399 GNISLDDVIEIAKIMKTRSMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQTEIDDGEVE 220 GNI LD++IEIA+ M+ +S + +A KEILGT SVGC VD K+P D+ I+ GE+E Sbjct: 102 GNIQLDEIIEIARQMRDKSFGRTLASVTKEILGTAQSVGCRVDFKNPHDIIEGINAGEIE 161 Query: 219 IP 214 IP Sbjct: 162 IP 163
>RL12_ENCCU (Q8SR84) 60S ribosomal protein L12| Length = 166 Score = 72.0 bits (175), Expect(2) = 1e-25 Identities = 31/63 (49%), Positives = 50/63 (79%), Gaps = 1/63 (1%) Frame = -3 Query: 399 GNISLDDVIEIAKIMKT-RSMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQTEIDDGEV 223 G++ + +V++IA+I ++ RS + ++GTVKE+LGTC S+GC VDGK PK++ EID GE+ Sbjct: 102 GSLRMTEVVDIARIARSSRSYSNSLSGTVKEVLGTCKSIGCKVDGKCPKEVTREIDAGEI 161 Query: 222 EIP 214 ++P Sbjct: 162 KLP 164 Score = 63.9 bits (154), Expect(2) = 1e-25 Identities = 31/49 (63%), Positives = 38/49 (77%) Frame = -2 Query: 544 KGLRVTVKLTVQNRQAKVSVVPSAAALVIKSLKEPERDRKKVKNIKHNG 398 K L+V V+L +++R+A V V PS A L+IKSLKEP RDRKK KNI HNG Sbjct: 54 KSLKVHVQLAIKDRKATVEVQPSVATLIIKSLKEPPRDRKKEKNILHNG 102
>RL11_ARCFU (O29712) 50S ribosomal protein L11P| Length = 157 Score = 66.2 bits (160), Expect = 6e-11 Identities = 28/62 (45%), Positives = 47/62 (75%) Frame = -3 Query: 399 GNISLDDVIEIAKIMKTRSMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQTEIDDGEVE 220 GN++++ ++ IA+I + +S++ + VKE+LGTC S+G TV+GK PK+L I++G+VE Sbjct: 94 GNLTMEQLLNIARIKRQQSLSYTLKEVVKEVLGTCNSMGITVEGKSPKELTRMIEEGQVE 153 Query: 219 IP 214 IP Sbjct: 154 IP 155
>RL11_METJA (P54030) 50S ribosomal protein L11P| Length = 161 Score = 66.2 bits (160), Expect = 6e-11 Identities = 30/57 (52%), Positives = 43/57 (75%) Frame = -3 Query: 399 GNISLDDVIEIAKIMKTRSMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQTEIDDG 229 GN++L+ VI+IAK+ K ++ + VKE+LGTC S+G TV+GKDPK++Q EID G Sbjct: 96 GNLTLEQVIKIAKMKKDAMLSYTLKNAVKEVLGTCGSMGVTVEGKDPKEVQKEIDAG 152
>RL11_THEAC (Q9HL70) 50S ribosomal protein L11P| Length = 156 Score = 65.1 bits (157), Expect = 1e-10 Identities = 27/61 (44%), Positives = 41/61 (67%) Frame = -3 Query: 399 GNISLDDVIEIAKIMKTRSMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQTEIDDGEVE 220 GN +LD ++++AK +A ++ E+LGTCVS+G VDGKDPK++Q +I GE+ Sbjct: 96 GNATLDQIVDVAKTKMASMLASDLKAATLEVLGTCVSMGINVDGKDPKEVQRQIKAGEIS 155 Query: 219 I 217 I Sbjct: 156 I 156
>RL11_PYRFU (Q8TZK0) 50S ribosomal protein L11P| Length = 164 Score = 63.5 bits (153), Expect = 4e-10 Identities = 26/57 (45%), Positives = 44/57 (77%) Frame = -3 Query: 399 GNISLDDVIEIAKIMKTRSMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQTEIDDG 229 GN++++ VI+IAK+ K + +A + KE++GT +S+G TV+GKDP+++Q EID+G Sbjct: 96 GNLTMEQVIKIAKMKKDQMLALTLKAAAKEVIGTALSMGVTVEGKDPREVQKEIDEG 152
>RL11_PYRAB (Q9V2S3) 50S ribosomal protein L11P| Length = 164 Score = 62.8 bits (151), Expect = 6e-10 Identities = 25/57 (43%), Positives = 44/57 (77%) Frame = -3 Query: 399 GNISLDDVIEIAKIMKTRSMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQTEIDDG 229 GN++++ VI+IAK+ + + +A + KE++GT +S+G TV+GKDP+++Q EID+G Sbjct: 96 GNLTMEQVIKIAKMKRNQMLALTLKAAAKEVIGTALSMGVTVEGKDPREVQREIDEG 152
>RL11_METKA (Q8TX52) 50S ribosomal protein L11P| Length = 166 Score = 62.0 bits (149), Expect = 1e-09 Identities = 28/58 (48%), Positives = 44/58 (75%) Frame = -3 Query: 399 GNISLDDVIEIAKIMKTRSMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQTEIDDGE 226 G++S++ VI+IAK+ ++ ++ KEILGTC S+G TV+GKDPK++Q EID+G+ Sbjct: 96 GDLSMEQVIKIAKMKFDDLLSYDLKTAAKEILGTCGSMGVTVEGKDPKEVQKEIDEGK 153
>RL11_PYRKO (Q5JH34) 50S ribosomal protein L11P| Length = 165 Score = 61.2 bits (147), Expect = 2e-09 Identities = 25/57 (43%), Positives = 43/57 (75%) Frame = -3 Query: 399 GNISLDDVIEIAKIMKTRSMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQTEIDDG 229 GN++++ VI+IAK+ + +A + KE++GT +S+G TV+GKDP+++Q EID+G Sbjct: 96 GNLTMEQVIKIAKMKIDQMLAPNLKAAAKEVIGTALSMGVTVEGKDPREVQREIDEG 152
>RL11_PYRHO (O57779) 50S ribosomal protein L11P| Length = 164 Score = 61.2 bits (147), Expect = 2e-09 Identities = 25/57 (43%), Positives = 44/57 (77%) Frame = -3 Query: 399 GNISLDDVIEIAKIMKTRSMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQTEIDDG 229 GN++++ VI+IAK+ +++ +A + KE++GT +S+G TV+GKDP+ +Q EID+G Sbjct: 96 GNLTMEQVIKIAKMKRSQMLALTLKAAAKEVIGTALSMGVTVEGKDPRIVQREIDEG 152
>RL11_PICTO (Q6L1Y0) 50S ribosomal protein L11P| Length = 155 Score = 59.7 bits (143), Expect = 5e-09 Identities = 26/61 (42%), Positives = 44/61 (72%) Frame = -3 Query: 399 GNISLDDVIEIAKIMKTRSMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQTEIDDGEVE 220 GN +L+ + ++A+ ++ ++ M G V E+LG+ VS+G TVDG+DPK++Q I +GE+E Sbjct: 95 GNATLEQIKKVAESKRSALLSYNMKGAVLEVLGSAVSLGITVDGRDPKEVQKMIKNGEIE 154 Query: 219 I 217 I Sbjct: 155 I 155
>RL11_METTH (O27715) 50S ribosomal protein L11P| Length = 160 Score = 58.9 bits (141), Expect = 9e-09 Identities = 25/56 (44%), Positives = 42/56 (75%) Frame = -3 Query: 396 NISLDDVIEIAKIMKTRSMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQTEIDDG 229 +IS++ V++IA++ ++ + VKEI+GTCVS+G TV+GKDP+++Q E+D G Sbjct: 97 DISMEQVLKIARMKFDALLSNDYKRAVKEIMGTCVSMGITVNGKDPREVQREVDQG 152
>RL11_SULAC (P35025) 50S ribosomal protein L11P| Length = 169 Score = 57.0 bits (136), Expect = 3e-08 Identities = 26/58 (44%), Positives = 38/58 (65%) Frame = -3 Query: 399 GNISLDDVIEIAKIMKTRSMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQTEIDDGE 226 GN+ L+ + +IA K + AK + +K +LGT S+G TV+GKDPKD+ EID G+ Sbjct: 95 GNLDLEQIADIAIKKKPQLSAKTLTAAIKSLLGTARSIGITVEGKDPKDVIKEIDQGK 152
>RL11_SULSO (P96037) 50S ribosomal protein L11P| Length = 170 Score = 55.8 bits (133), Expect = 8e-08 Identities = 25/60 (41%), Positives = 40/60 (66%) Frame = -3 Query: 399 GNISLDDVIEIAKIMKTRSMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQTEIDDGEVE 220 GN+SL+ VI+IA + K K + +K +LGT S+G TVD +DPK+L E+++G+ + Sbjct: 96 GNLSLEQVIKIAIMKKPGLTTKSLKAALKSMLGTAKSIGLTVDNRDPKELVKEVEEGKYD 155
>RL11_METMP (P62445) 50S ribosomal protein L11P| Length = 159 Score = 55.5 bits (132), Expect = 1e-07 Identities = 23/60 (38%), Positives = 40/60 (66%) Frame = -3 Query: 399 GNISLDDVIEIAKIMKTRSMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQTEIDDGEVE 220 GNI+++ +++IAK+ + +A + KE++GTCVSVG +V+G P + Q ID G+ + Sbjct: 96 GNITMEQIVKIAKMKQDAMLAYNLKNASKEVVGTCVSVGISVEGMTPSEAQKAIDAGQFD 155
>RL11_THEVO (Q97BN1) 50S ribosomal protein L11P| Length = 158 Score = 55.1 bits (131), Expect = 1e-07 Identities = 24/61 (39%), Positives = 40/61 (65%) Frame = -3 Query: 399 GNISLDDVIEIAKIMKTRSMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQTEIDDGEVE 220 GN +L+ + +A +AK++ V E+LGTCV++G V+GKDPK++Q I G+++ Sbjct: 96 GNATLEQIKNVAIKKMPSMLAKDLKSAVLEVLGTCVAMGINVEGKDPKEVQKLIKSGQIK 155 Query: 219 I 217 I Sbjct: 156 I 156
>RL11_SULTO (Q971J0) 50S ribosomal protein L11P| Length = 170 Score = 55.1 bits (131), Expect = 1e-07 Identities = 25/60 (41%), Positives = 39/60 (65%) Frame = -3 Query: 399 GNISLDDVIEIAKIMKTRSMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQTEIDDGEVE 220 G+I +D+I++A + K + AK + VK ILGT S+G TVD K PK+L +D+G+ + Sbjct: 96 GDIKFEDIIQVAIMKKPQITAKTLKAAVKSILGTAHSIGLTVDKKSPKELVKAVDEGKYD 155
>RL11_AERPE (Q9Y9W5) 50S ribosomal protein L11P| Length = 108 Score = 53.9 bits (128), Expect = 3e-07 Identities = 24/57 (42%), Positives = 38/57 (66%) Frame = -3 Query: 399 GNISLDDVIEIAKIMKTRSMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQTEIDDG 229 G++ + ++EIA K +AK + VK ILG+ S+G TVDGKDPK++ ++D+G Sbjct: 34 GDLPFEKIVEIAIEKKPDLLAKTLKAAVKTILGSARSIGVTVDGKDPKEVTRQVDEG 90
>RL11_METMA (Q8PY53) 50S ribosomal protein L11P| Length = 161 Score = 52.4 bits (124), Expect = 8e-07 Identities = 21/60 (35%), Positives = 40/60 (66%) Frame = -3 Query: 399 GNISLDDVIEIAKIMKTRSMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQTEIDDGEVE 220 GN+++ V +IA++ K ++ ++ T+KE++GTCV +G V+G KD Q +D+G+ + Sbjct: 94 GNLTIPQVAKIARMKKEDVLSYDLKATMKEVMGTCVPMGVNVEGMKAKDCQKALDEGKFD 153
>RL11_NANEQ (P62446) 50S ribosomal protein L11P| Length = 160 Score = 51.6 bits (122), Expect = 1e-06 Identities = 23/58 (39%), Positives = 35/58 (60%) Frame = -3 Query: 399 GNISLDDVIEIAKIMKTRSMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQTEIDDGE 226 GN+S+ DV+EIAK + VK +LGT + G V+ KDPK++ E+D+G+ Sbjct: 96 GNVSMKDVVEIAKKKIDSMPTSSLKAAVKSVLGTARATGIKVENKDPKEVTKEVDEGK 153
>RL11_METAC (Q8TI82) 50S ribosomal protein L11P| Length = 161 Score = 48.9 bits (115), Expect = 9e-06 Identities = 18/60 (30%), Positives = 39/60 (65%) Frame = -3 Query: 399 GNISLDDVIEIAKIMKTRSMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQTEIDDGEVE 220 GN+++ V ++A++ K ++ ++ +KE++G+CV +G V+G KD Q +D+G+ + Sbjct: 94 GNLTISQVAKVARMKKEDVLSYDLKAAMKEVMGSCVPMGVNVEGMKAKDCQKALDEGKFD 153
>RL11_PYRAE (Q8ZTT5) 50S ribosomal protein L11P| Length = 167 Score = 48.9 bits (115), Expect = 9e-06 Identities = 20/60 (33%), Positives = 38/60 (63%) Frame = -3 Query: 399 GNISLDDVIEIAKIMKTRSMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQTEIDDGEVE 220 GN+S ++EIA + K +K + VK++L TC ++G TVDG+ +++ ++D G+ + Sbjct: 96 GNLSFAQLVEIALLKKDELKSKTLKSAVKQLLSTCKAMGVTVDGRKAEEVLRDVDGGKYD 155
>RL11_HALMA (P14122) 50S ribosomal protein L11P (Hmal11)| Length = 161 Score = 48.5 bits (114), Expect = 1e-05 Identities = 19/59 (32%), Positives = 39/59 (66%) Frame = -3 Query: 396 NISLDDVIEIAKIMKTRSMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQTEIDDGEVE 220 ++S+D V +IA+ ++ ++ KE++GTC S+G T++G++P++ + ID GE + Sbjct: 94 DLSVDQVKQIAEQKHPDLLSYDLTNAAKEVVGTCTSLGVTIEGENPREFKERIDAGEYD 152
>RL11_HALSA (P05969) 50S ribosomal protein L11P| Length = 162 Score = 45.1 bits (105), Expect = 1e-04 Identities = 18/59 (30%), Positives = 35/59 (59%) Frame = -3 Query: 396 NISLDDVIEIAKIMKTRSMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQTEIDDGEVE 220 ++S++ + IA+ K +A + KE+ GTC S+G T++G+D + +DDG+ + Sbjct: 94 DLSIEQLKTIAEQKKPDLLAYDARNAAKEVAGTCASLGVTIEGEDARTFNERVDDGDYD 152
>RL11_ACIAM (P52862) 50S ribosomal protein L11P (Fragment)| Length = 141 Score = 43.9 bits (102), Expect = 3e-04 Identities = 21/45 (46%), Positives = 28/45 (62%) Frame = -3 Query: 396 NISLDDVIEIAKIMKTRSMAKEMAGTVKEILGTCVSVGCTVDGKD 262 N+SL+D+I++A K AK + VK ILGT +G TVD KD Sbjct: 97 NVSLEDIIDVAITKKPSLTAKTLKAAVKSILGTARQIGLTVDKKD 141
>RL11_HALVO (P41200) 50S ribosomal protein L11P (L11E)| Length = 158 Score = 41.2 bits (95), Expect = 0.002 Identities = 15/59 (25%), Positives = 37/59 (62%) Frame = -3 Query: 396 NISLDDVIEIAKIMKTRSMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQTEIDDGEVE 220 ++S++ + ++A+ + ++ ++ KE+ GTC S+G T++G+D + + ID G+ + Sbjct: 94 DMSIEQLKKVAEQKSSDLLSYDLKNASKEVAGTCASLGVTIEGEDARTFKQRIDGGDFD 152
>RL11_COREF (Q8FSA7) 50S ribosomal protein L11| Length = 144 Score = 33.5 bits (75), Expect = 0.40 Identities = 16/44 (36%), Positives = 26/44 (59%) Frame = -3 Query: 399 GNISLDDVIEIAKIMKTRSMAKEMAGTVKEILGTCVSVGCTVDG 268 G +++D + EIA+ K A+++ K I GT S+G TV+G Sbjct: 101 GKVTMDQIREIAETKKEDLNARDIDAAAKIIAGTARSMGITVEG 144
>RL11_CORGL (Q9LAK6) 50S ribosomal protein L11| Length = 145 Score = 32.0 bits (71), Expect = 1.2 Identities = 17/44 (38%), Positives = 25/44 (56%) Frame = -3 Query: 399 GNISLDDVIEIAKIMKTRSMAKEMAGTVKEILGTCVSVGCTVDG 268 G +S+ V EIA+ K A+++ K I GT S+G TV+G Sbjct: 102 GKVSMAQVREIAETKKEDLNARDIDAAAKIIAGTARSMGITVEG 145
>RL11_LEGPL (Q5WZM3) 50S ribosomal protein L11| Length = 144 Score = 31.6 bits (70), Expect = 1.5 Identities = 15/42 (35%), Positives = 25/42 (59%) Frame = -3 Query: 393 ISLDDVIEIAKIMKTRSMAKEMAGTVKEILGTCVSVGCTVDG 268 +++ + EIAK+ K A ++A V+ I GT S+G V+G Sbjct: 101 LNVSQLEEIAKVKKPDLTAADLAAAVRSIAGTARSMGIEVEG 142
>RL11_LEGPH (Q5ZYQ4) 50S ribosomal protein L11| Length = 144 Score = 31.6 bits (70), Expect = 1.5 Identities = 15/42 (35%), Positives = 25/42 (59%) Frame = -3 Query: 393 ISLDDVIEIAKIMKTRSMAKEMAGTVKEILGTCVSVGCTVDG 268 +++ + EIAK+ K A ++A V+ I GT S+G V+G Sbjct: 101 LNVSQLEEIAKVKKPDLTAADLAAAVRSIAGTARSMGIEVEG 142
>RL11_LEGPA (Q5X870) 50S ribosomal protein L11| Length = 144 Score = 31.6 bits (70), Expect = 1.5 Identities = 15/42 (35%), Positives = 25/42 (59%) Frame = -3 Query: 393 ISLDDVIEIAKIMKTRSMAKEMAGTVKEILGTCVSVGCTVDG 268 +++ + EIAK+ K A ++A V+ I GT S+G V+G Sbjct: 101 LNVSQLEEIAKVKKPDLTAADLAAAVRSIAGTARSMGIEVEG 142
>RL11_XANAC (Q8PNT4) 50S ribosomal protein L11| Length = 142 Score = 31.2 bits (69), Expect = 2.0 Identities = 15/44 (34%), Positives = 25/44 (56%) Frame = -3 Query: 399 GNISLDDVIEIAKIMKTRSMAKEMAGTVKEILGTCVSVGCTVDG 268 G ++ + EIAK+ + A E+ V+ I G+ S+G TV+G Sbjct: 99 GKVTRKQLEEIAKVKEADLTAAELEAAVRTIAGSARSMGLTVEG 142
>RL11_STRSF (Q07975) 50S ribosomal protein L11| Length = 144 Score = 30.0 bits (66), Expect = 4.4 Identities = 17/43 (39%), Positives = 23/43 (53%) Frame = -3 Query: 396 NISLDDVIEIAKIMKTRSMAKEMAGTVKEILGTCVSVGCTVDG 268 N++ D V EIA I A ++ K I GT S+G TV+G Sbjct: 102 NVTRDQVREIATIKMPDLNANDLDAAEKIIAGTARSMGVTVEG 144
>RL11_CHLTE (Q8KG19) 50S ribosomal protein L11| Length = 141 Score = 30.0 bits (66), Expect = 4.4 Identities = 12/44 (27%), Positives = 27/44 (61%) Frame = -3 Query: 399 GNISLDDVIEIAKIMKTRSMAKEMAGTVKEILGTCVSVGCTVDG 268 G +++D V +IA++ + + ++ G + ++GT S+G V+G Sbjct: 98 GTVTMDQVRKIAELKRPDLNSIDLEGATQMVIGTARSMGIVVEG 141
>IF2_BACFR (Q64ZR4) Translation initiation factor IF-2| Length = 1015 Score = 30.0 bits (66), Expect = 4.4 Identities = 12/45 (26%), Positives = 25/45 (55%) Frame = -3 Query: 378 VIEIAKIMKTRSMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQT 244 V+++ + + +A M +V +++GTC+S+G V D +T Sbjct: 435 VLKLTEFVTANELASMMNVSVNQVIGTCMSIGMMVSINQRLDAET 479
>IF2_BACFN (Q5LIN1) Translation initiation factor IF-2| Length = 1015 Score = 30.0 bits (66), Expect = 4.4 Identities = 12/45 (26%), Positives = 25/45 (55%) Frame = -3 Query: 378 VIEIAKIMKTRSMAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQT 244 V+++ + + +A M +V +++GTC+S+G V D +T Sbjct: 435 VLKLTEFVTANELASMMNVSVNQVIGTCMSIGMMVSINQRLDAET 479
>RL11_DEIRA (Q9RSS7) 50S ribosomal protein L11| Length = 144 Score = 29.6 bits (65), Expect = 5.8 Identities = 15/44 (34%), Positives = 22/44 (50%) Frame = -3 Query: 399 GNISLDDVIEIAKIMKTRSMAKEMAGTVKEILGTCVSVGCTVDG 268 G ++ D V+EIAK A + + GT S+G TV+G Sbjct: 97 GKLNWDQVLEIAKTKMPDLNAGSVEAAANTVAGTARSMGVTVEG 140
>RL11_RICPR (Q9ZE24) 50S ribosomal protein L11| Length = 145 Score = 29.3 bits (64), Expect = 7.6 Identities = 15/44 (34%), Positives = 23/44 (52%) Frame = -3 Query: 399 GNISLDDVIEIAKIMKTRSMAKEMAGTVKEILGTCVSVGCTVDG 268 G +++DD EIAK+ + K + K I G+ S+G V G Sbjct: 101 GKVTIDDCREIAKLKISDLNTKNIEAATKIICGSAASMGLEVVG 144
>RL11_RICCN (Q92J90) 50S ribosomal protein L11| Length = 145 Score = 29.3 bits (64), Expect = 7.6 Identities = 15/44 (34%), Positives = 22/44 (50%) Frame = -3 Query: 399 GNISLDDVIEIAKIMKTRSMAKEMAGTVKEILGTCVSVGCTVDG 268 G +++DD EIAK+ K + K I G+ S+G V G Sbjct: 101 GKVTMDDCREIAKLKMPDLNTKNIEAATKIICGSAASMGLEVVG 144
>RL11_NITEU (Q82T71) 50S ribosomal protein L11| Length = 143 Score = 29.3 bits (64), Expect = 7.6 Identities = 16/44 (36%), Positives = 22/44 (50%) Frame = -3 Query: 399 GNISLDDVIEIAKIMKTRSMAKEMAGTVKEILGTCVSVGCTVDG 268 G ++ EIAKI A +M V+ I G+ S+G VDG Sbjct: 99 GKLTRSQAEEIAKIKMADLTAADMDAAVRTIAGSARSMGVEVDG 142 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,435,109 Number of Sequences: 219361 Number of extensions: 935738 Number of successful extensions: 3447 Number of sequences better than 10.0: 52 Number of HSP's better than 10.0 without gapping: 3370 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3446 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4373119116 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
