ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd17f19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK121389.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 1e-13
2dbj|AK103910.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 1e-13
3gb|AY106157.1| Zea mays PCO066687 mRNA sequence 84 6e-13
4gb|AY104332.1| Zea mays PCO109929 mRNA sequence 58 3e-05
5gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 54 5e-04
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
7gb|AC137076.1| Genomic sequence for Oryza sativa, Nipponbare str... 54 5e-04
8gb|AY109043.1| Zea mays PCO147658 mRNA sequence 52 0.002
9gb|AC126783.33| Medicago truncatula clone mth2-15k17, complete s... 44 0.48
10gb|AC162523.9| Mus musculus chromosome 8, clone RP23-370L21, com... 42 1.9
11gb|AC167707.2| Reniera sp. JGI-2005 clone JGIBAYC-9L12, complete... 42 1.9
12gb|AC123616.11| Mus musculus chromosome 8, clone RP23-4F1, compl... 42 1.9
13gb|AC127551.7| Mus musculus BAC clone RP24-547H23 from chromosom... 42 1.9
14emb|AL157882.5| Human DNA sequence from clone RP11-202I11 on chr... 42 1.9
15gb|AC007782.20| Homo sapiens 12 BAC RP11-515B12 (Roswell Park Ca... 42 1.9
16dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
17dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
18dbj|AP005395.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
19dbj|AP004463.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
20gb|AC166746.7| Mus musculus chromosome 19, clone RP24-248H10, co... 40 7.5
21gb|AC131743.3| Mus musculus BAC clone RP23-68K21 from chromosome... 40 7.5
22gb|AC144768.2| Mus musculus BAC clone RP23-24K24 from chromosome... 40 7.5
23gb|AC107663.10| Mus musculus chromosome 13, clone RP23-99G9, com... 40 7.5
24gb|AC087801.69| Mus musculus strain C57BL/6J clone rp23-396i23 m... 40 7.5
25gb|AC125484.4| Mus musculus BAC clone RP23-127L14 from chromosom... 40 7.5
26gb|AC104100.6| Mus musculus BAC clone RP24-374D12 from chromosom... 40 7.5
27emb|BX511254.6| Zebrafish DNA sequence from clone DKEYP-90G2 in ... 40 7.5
28dbj|AK030732.1| Mus musculus 8 days embryo whole body cDNA, RIKE... 40 7.5
29dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
30dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
31dbj|AP005785.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
32dbj|AP005199.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
33dbj|AP004665.4| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
34dbj|AP004558.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
35gb|AC110576.12| Mus musculus chromosome 8, clone RP23-329K17, co... 40 7.5
36emb|CR974440.6| Zebrafish DNA sequence from clone CH73-78M16 in ... 40 7.5
37gb|AC102572.17| Mus musculus chromosome 18, clone RP23-234A9, co... 40 7.5
38gb|AC151001.2| Mus musculus BAC clone RP23-45M16 from 7, complet... 40 7.5
39dbj|AB066524.1| Macaca fascicularis brain cDNA clone:QmoA-11085,... 40 7.5 
>dbj|AK121389.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023128M19, full
            insert sequence
          Length = 3343

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 100/119 (84%)
 Strand = Plus / Minus

                                                                        
Query: 417  ttctgcagctcttgcttccaccctggctgcaggtagaacacgtccttggtgacgccgaag 476
            ||||| || ||||| ||||||||||||||| |||||||| | ||||| || |  || || 
Sbjct: 3053 ttctgtagttcttgtttccaccctggctgctggtagaactcttccttcgttataccaaat 2994

                                                                       
Query: 477  acagtctggaactcgctctccgataagtacgcctctctgcgtttgtagtctatcccacg 535
            ||||||||||| ||||| ||||| || || | ||||||||||||||| |||||||||||
Sbjct: 2993 acagtctggaattcgctgtccgacaaatatgtctctctgcgtttgtaatctatcccacg 2935
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>dbj|AK103910.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033150O18, full
            insert sequence
          Length = 1711

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 100/119 (84%)
 Strand = Plus / Minus

                                                                        
Query: 417  ttctgcagctcttgcttccaccctggctgcaggtagaacacgtccttggtgacgccgaag 476
            ||||| || ||||| ||||||||||||||| |||||||| | ||||| || |  || || 
Sbjct: 1253 ttctgtagttcttgtttccaccctggctgctggtagaactcttccttcgttataccaaat 1194

                                                                       
Query: 477  acagtctggaactcgctctccgataagtacgcctctctgcgtttgtagtctatcccacg 535
            ||||||||||| ||||| ||||| || || | ||||||||||||||| |||||||||||
Sbjct: 1193 acagtctggaattcgctgtccgacaaatatgtctctctgcgtttgtaatctatcccacg 1135
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>gb|AY106157.1| Zea mays PCO066687 mRNA sequence
          Length = 989

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 111/134 (82%)
 Strand = Plus / Minus

                                                                       
Query: 402 agatcggctttccgcttctgcagctcttgcttccaccctggctgcaggtagaacacgtcc 461
           ||||| ||||| |||||||| || |||||||||||   ||||||  |||||||  | |||
Sbjct: 582 agatctgcttttcgcttctgtagttcttgcttccaatttggctgtcggtagaatgcatcc 523

                                                                       
Query: 462 ttggtgacgccgaagacagtctggaactcgctctccgataagtacgcctctctgcgtttg 521
           ||||| | ||| || ||||| ||||| || || || |||||||| |||||||||||||||
Sbjct: 522 ttggtcatgccaaaaacagtttggaattcactatctgataagtatgcctctctgcgtttg 463

                         
Query: 522 tagtctatcccacg 535
           || |||||||||||
Sbjct: 462 taatctatcccacg 449
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>gb|AY104332.1| Zea mays PCO109929 mRNA sequence
          Length = 989

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 119/149 (79%)
 Strand = Plus / Minus

                                                                       
Query: 402 agatcggctttccgcttctgcagctcttgcttccaccctggctgcaggtagaacacgtcc 461
           ||||| ||||||  |||||||| |||||||||||||| |||||||  ||||||| | || 
Sbjct: 813 agatcagctttcttcttctgcaactcttgcttccaccttggctgctcgtagaactcctct 754

                                                                       
Query: 462 ttggtgacgccgaagacagtctggaactcgctctccgataagtacgcctctctgcgtttg 521
           ||||| | ||| || || |||| ||||||  | |||   || || | ||||||||| |||
Sbjct: 753 ttggtcatgccaaacacggtctcgaactcattgtccaccaaatatgtctctctgcgcttg 694

                                        
Query: 522 tagtctatcccacggataggatcagtaga 550
           | ||||||||||| || ||| ||||||||
Sbjct: 693 tggtctatcccactgacagggtcagtaga 665
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 69/83 (83%)
 Strand = Plus / Minus

                                                                            
Query: 417      ttctgcagctcttgcttccaccctggctgcaggtagaacacgtccttggtgacgccgaag 476
                ||||| || ||||| ||||||||||||||| |||||||| | ||||| || |  || || 
Sbjct: 13626441 ttctgtagttcttgtttccaccctggctgctggtagaactcttccttcgttataccaaat 13626382

                                       
Query: 477      acagtctggaactcgctctccga 499
                ||||||||||| ||||| |||||
Sbjct: 13626381 acagtctggaattcgctgtccga 13626359



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                            
Query: 508      cctctctgcgtttgtagtctatcccacg 535
                |||||||||||||||| |||||||||||
Sbjct: 13625506 cctctctgcgtttgtaatctatcccacg 13625479
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 69/83 (83%)
 Strand = Plus / Minus

                                                                            
Query: 417      ttctgcagctcttgcttccaccctggctgcaggtagaacacgtccttggtgacgccgaag 476
                ||||| || ||||| ||||||||||||||| |||||||| | ||||| || |  || || 
Sbjct: 13621416 ttctgtagttcttgtttccaccctggctgctggtagaactcttccttcgttataccaaat 13621357

                                       
Query: 477      acagtctggaactcgctctccga 499
                ||||||||||| ||||| |||||
Sbjct: 13621356 acagtctggaattcgctgtccga 13621334



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                            
Query: 508      cctctctgcgtttgtagtctatcccacg 535
                |||||||||||||||| |||||||||||
Sbjct: 13620481 cctctctgcgtttgtaatctatcccacg 13620454
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>gb|AC137076.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0033D20, from chromosome 3, complete sequence
          Length = 128707

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 69/83 (83%)
 Strand = Plus / Minus

                                                                         
Query: 417   ttctgcagctcttgcttccaccctggctgcaggtagaacacgtccttggtgacgccgaag 476
             ||||| || ||||| ||||||||||||||| |||||||| | ||||| || |  || || 
Sbjct: 17113 ttctgtagttcttgtttccaccctggctgctggtagaactcttccttcgttataccaaat 17054

                                    
Query: 477   acagtctggaactcgctctccga 499
             ||||||||||| ||||| |||||
Sbjct: 17053 acagtctggaattcgctgtccga 17031



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 508   cctctctgcgtttgtagtctatcccacg 535
             |||||||||||||||| |||||||||||
Sbjct: 16178 cctctctgcgtttgtaatctatcccacg 16151
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>gb|AY109043.1| Zea mays PCO147658 mRNA sequence
          Length = 822

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                 
Query: 402 agatcggctttccgcttctgcagctcttgcttccaccctggctgcaggtagaac 455
           ||||||||||||   ||||||| |||||||||||||| |||||||  |||||||
Sbjct: 362 agatcggctttctttttctgcaactcttgcttccaccttggctgctcgtagaac 309
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>gb|AC126783.33| Medicago truncatula clone mth2-15k17, complete sequence
          Length = 117437

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 186   gcaagcagcacagcacagcaca 207
             ||||||||||||||||||||||
Sbjct: 27034 gcaagcagcacagcacagcaca 27055
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>gb|AC162523.9| Mus musculus chromosome 8, clone RP23-370L21, complete sequence
          Length = 193777

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 178    aggaccttgcaagcagcacag 198
              |||||||||||||||||||||
Sbjct: 184822 aggaccttgcaagcagcacag 184802
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>gb|AC167707.2| Reniera sp. JGI-2005 clone JGIBAYC-9L12, complete sequence
          Length = 40570

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 249   caaaaccaaccaaaagccaca 269
             |||||||||||||||||||||
Sbjct: 12679 caaaaccaaccaaaagccaca 12659
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>gb|AC123616.11| Mus musculus chromosome 8, clone RP23-4F1, complete sequence
          Length = 228851

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 178    aggaccttgcaagcagcacag 198
              |||||||||||||||||||||
Sbjct: 108739 aggaccttgcaagcagcacag 108759
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>gb|AC127551.7| Mus musculus BAC clone RP24-547H23 from chromosome 8, complete sequence
          Length = 204342

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 178    aggaccttgcaagcagcacag 198
              |||||||||||||||||||||
Sbjct: 202779 aggaccttgcaagcagcacag 202799
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>emb|AL157882.5| Human DNA sequence from clone RP11-202I11 on chromosome 9q21.32-22.2
             Contains the 5' end of the AGTPBP1 gene for  ATP/GTP
             binding protein 1 (NNA1, KIAA1035), a novel gene, the 5'
             end of a pseudogene similar to part of a novel protein
             (DKFZp434D0917) and a CpG island, complete sequence
          Length = 172903

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 331   gtaaaaacaagcacatatgattgat 355
             ||||||||||| |||||||||||||
Sbjct: 63249 gtaaaaacaagtacatatgattgat 63273
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>gb|AC007782.20| Homo sapiens 12 BAC RP11-515B12 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 166083

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 335    aaacaagcacatatgattgat 355
              |||||||||||||||||||||
Sbjct: 146682 aaacaagcacatatgattgat 146662
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 188      aagcagcacagcacagcacac 208
                |||||||||||||||||||||
Sbjct: 20452453 aagcagcacagcacagcacac 20452473



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 188      aagcagcacagcacagcaca 207
                ||||||||||||||||||||
Sbjct: 21854019 aagcagcacagcacagcaca 21854038
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 345      atatgattgattgatctcattctgc 369
                ||||||||||||||||| |||||||
Sbjct: 28255741 atatgattgattgatctgattctgc 28255717
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>dbj|AP005395.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0623A10
          Length = 156517

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 345   atatgattgattgatctcattctgc 369
             ||||||||||||||||| |||||||
Sbjct: 53770 atatgattgattgatctgattctgc 53746
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>dbj|AP004463.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0456B03
          Length = 152973

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 188   aagcagcacagcacagcacac 208
             |||||||||||||||||||||
Sbjct: 83083 aagcagcacagcacagcacac 83103
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>gb|AC166746.7| Mus musculus chromosome 19, clone RP24-248H10, complete sequence
          Length = 156084

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 189   agcagcacagcacagcacac 208
             ||||||||||||||||||||
Sbjct: 32602 agcagcacagcacagcacac 32583
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>gb|AC131743.3| Mus musculus BAC clone RP23-68K21 from chromosome 13, complete sequence
          Length = 235930

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 431    cttccaccctggctgcaggt 450
              ||||||||||||||||||||
Sbjct: 213231 cttccaccctggctgcaggt 213212
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>gb|AC144768.2| Mus musculus BAC clone RP23-24K24 from chromosome 7, complete sequence
          Length = 230675

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 188    aagcagcacagcacagcaca 207
              ||||||||||||||||||||
Sbjct: 185816 aagcagcacagcacagcaca 185835
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>gb|AC107663.10| Mus musculus chromosome 13, clone RP23-99G9, complete sequence
          Length = 213163

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 128    gagaaaaaccatacacatat 147
              ||||||||||||||||||||
Sbjct: 195026 gagaaaaaccatacacatat 195045
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>gb|AC087801.69| Mus musculus strain C57BL/6J clone rp23-396i23 map 1, complete sequence
          Length = 197679

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 74     ccttccaaaacatacccagg 93
              ||||||||||||||||||||
Sbjct: 172430 ccttccaaaacatacccagg 172411
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>gb|AC125484.4| Mus musculus BAC clone RP23-127L14 from chromosome 13, complete sequence
          Length = 207318

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 431    cttccaccctggctgcaggt 450
              ||||||||||||||||||||
Sbjct: 194517 cttccaccctggctgcaggt 194536
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>gb|AC104100.6| Mus musculus BAC clone RP24-374D12 from chromosome 7, complete sequence
          Length = 139125

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 188   aagcagcacagcacagcaca 207
             ||||||||||||||||||||
Sbjct: 91892 aagcagcacagcacagcaca 91873
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>emb|BX511254.6| Zebrafish DNA sequence from clone DKEYP-90G2 in linkage group 17,
              complete sequence
          Length = 185139

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 320    tgatgagaggggtaaaaaca 339
              ||||||||||||||||||||
Sbjct: 117439 tgatgagaggggtaaaaaca 117420
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>dbj|AK030732.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:5730424L04 product:hypothetical
           Ubiquitin carboxyl-terminal hydrolase family 2
           containing protein, full insert sequence
          Length = 2337

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 74  ccttccaaaacatacccagg 93
           ||||||||||||||||||||
Sbjct: 213 ccttccaaaacatacccagg 194
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 191      cagcacagcacagcacactc 210
                ||||||||||||||||||||
Sbjct: 29562271 cagcacagcacagcacactc 29562252
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 189     agcagcacagcacagcacac 208
               ||||||||||||||||||||
Sbjct: 5079827 agcagcacagcacagcacac 5079808
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>dbj|AP005785.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0453H10
          Length = 133464

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 189   agcagcacagcacagcacac 208
             ||||||||||||||||||||
Sbjct: 40325 agcagcacagcacagcacac 40306
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>dbj|AP005199.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0627E10
          Length = 163388

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 191   cagcacagcacagcacactc 210
             ||||||||||||||||||||
Sbjct: 88943 cagcacagcacagcacactc 88924
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>dbj|AP004665.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0429B05
          Length = 155024

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 188    aagcagcacagcacagcaca 207
              ||||||||||||||||||||
Sbjct: 133602 aagcagcacagcacagcaca 133621
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>dbj|AP004558.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0409A07
          Length = 146663

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 188   aagcagcacagcacagcaca 207
             ||||||||||||||||||||
Sbjct: 54688 aagcagcacagcacagcaca 54707
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>gb|AC110576.12| Mus musculus chromosome 8, clone RP23-329K17, complete sequence
          Length = 224141

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 220    acaaacgaaagaatgaccta 239
              ||||||||||||||||||||
Sbjct: 113991 acaaacgaaagaatgaccta 113972
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>emb|CR974440.6| Zebrafish DNA sequence from clone CH73-78M16 in linkage group 22,
             complete sequence
          Length = 123466

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 189   agcagcacagcacagcacac 208
             ||||||||||||||||||||
Sbjct: 90010 agcagcacagcacagcacac 90029
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>gb|AC102572.17| Mus musculus chromosome 18, clone RP23-234A9, complete sequence
          Length = 204140

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 415   gcttctgcagctcttgcttc 434
             ||||||||||||||||||||
Sbjct: 70846 gcttctgcagctcttgcttc 70827
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>gb|AC151001.2| Mus musculus BAC clone RP23-45M16 from 7, complete sequence
          Length = 176698

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 188   aagcagcacagcacagcaca 207
             ||||||||||||||||||||
Sbjct: 51600 aagcagcacagcacagcaca 51581
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>dbj|AB066524.1| Macaca fascicularis brain cDNA clone:QmoA-11085, full insert
           sequence
          Length = 1776

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 124 aaccgagaaaaaccatacac 143
           ||||||||||||||||||||
Sbjct: 129 aaccgagaaaaaccatacac 110


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,331,099
Number of Sequences: 3902068
Number of extensions: 4331099
Number of successful extensions: 93312
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 93094
Number of HSP's gapped (non-prelim): 218
length of query: 553
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 530
effective length of database: 17,143,297,704
effective search space: 9085947783120
effective search space used: 9085947783120
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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