>gb|AC155827.10| Mus musculus 10 BAC RP24-408N5 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 149754

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 211    caaaaataaaccaaactgtagacaca 236
              |||||||||| |||||||||||||||
Sbjct: 104950 caaaaataaaacaaactgtagacaca 104925

>gb|U12637.1|SEN11 Hemerocallis hybrid cultivar cysteine proteinase (SEN11) mRNA,
           complete cds
          Length = 1252

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 431 cctttctccctccagtcgacgg 452
           ||||||||||||||||||||||
Sbjct: 420 cctttctccctccagtcgacgg 399

>emb|AL596325.5| Human DNA sequence from clone RP11-359K18 on chromosome 1 Contains
             ubiquinol-cytochrome c reductase binding (UQCRB)
             pseudogene, the UAP1 gene for UDP-N-acteylglucosamine
             pyrophosphorylase 1,  the 5' end of the DDR2 gene for
             discoidin domain receptor family member 2 and a CpG
             island, complete sequence
          Length = 152770

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 21    ttcatctcagtttttgttata 41
             |||||||||||||||||||||
Sbjct: 41544 ttcatctcagtttttgttata 41564

>gb|AC013726.7| Homo sapiens BAC clone RP11-400N9 from 2, complete sequence
          Length = 214647

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 200   acagaaatactcaaaaataaa 220
             |||||||||||||||||||||
Sbjct: 15781 acagaaatactcaaaaataaa 15801

>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica
          Length = 3066374

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 93     atccatctgtgcttcatctct 113
              |||||||||||||||||||||
Sbjct: 260689 atccatctgtgcttcatctct 260709

>gb|AC144926.6| Mus musculus chromosome 8, clone RP23-8E24, complete sequence
          Length = 214694

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 18    attttcatctcagtttttgttata 41
             |||||||||||||| |||||||||
Sbjct: 62239 attttcatctcagtatttgttata 62262

>ref|XM_323064.1| Neurospora crassa OR74A hypothetical protein (NCU03763.1) partial
           mRNA
          Length = 1578

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 446 tcgacggcgggcctgatctt 465
           ||||||||||||||||||||
Sbjct: 194 tcgacggcgggcctgatctt 175

>ref|XM_956017.1| Neurospora crassa OR74A hypothetical protein (NCU03763.1) partial
           mRNA
          Length = 1578

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 446 tcgacggcgggcctgatctt 465
           ||||||||||||||||||||
Sbjct: 194 tcgacggcgggcctgatctt 175

>gb|AC147886.2| Xenopus tropicalis clone CH216-134O16, complete sequence
          Length = 150155

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 200   acagaaatactcaaaaataa 219
             ||||||||||||||||||||
Sbjct: 20869 acagaaatactcaaaaataa 20850

>gb|AC108797.8| Mus musculus chromosome 3, clone RP23-349M18, complete sequence
          Length = 208211

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 328    caccaatgcaatatggaaga 347
              ||||||||||||||||||||
Sbjct: 135895 caccaatgcaatatggaaga 135914

>ref|XM_758654.1| Theileria parva strain Muguga chromosome 4 hypothetical protein
           (TP04_0112) partial mRNA
          Length = 1455

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 207 tactcaaaaataaaccaaac 226
           ||||||||||||||||||||
Sbjct: 809 tactcaaaaataaaccaaac 828

>emb|AL031663.2|HS461P17 Human DNA sequence from clone RP3-461P17 on chromosome 20q12-13.2
             Contains two novel genes, the WFDC2 gene for WAP
             four-disulfide core domain 2, the RPL5P2 gene for
             ribosomal protein L5 pseudogene 2, a COX6C (Cytochrome C
             Oxidase subunit VIC) pseudogene, a pseudogene similar to
             part of heat shock 60kDa protein 1 (chaperonin) (HSPD1),
             the SPINT3 gene for Kunitz type serine protease inhibitor
             3 (HKIB9), the SPINLW1 gene for serine protease
             inhibitor-like with Kunitz and WAP domains 1 (eppin), the
             WFDC6 gene for WAP four-disulfide core domain 6, the 3'
             end for WFDC8 gene for WAP four-disulfide core domain 8
             and a CpG island, complete sequence
          Length = 127027

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 304   ctctccccgccccactcacc 323
             ||||||||||||||||||||
Sbjct: 33631 ctctccccgccccactcacc 33612

>emb|Z68289.1|HSU50F11 Human DNA sequence from clone LL0XNC01-50F11 on chromosome X
           Contains gene FLJ31916, complete sequence
          Length = 37628

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 130 cctccagattttattctggttccagggc 157
           |||||||||||||||| || ||||||||
Sbjct: 76  cctccagattttattcagggtccagggc 103

>emb|AL590787.24| Human DNA sequence from clone RP11-271M24 on chromosome 13 Contains the
             MTMR6 gene for myotubularin related protein 6, the 5' end
             of a novel gene (KIAA0410) and 2 CpG islands, complete
             sequence
          Length = 122589

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 95    ccatctgtgcttcatctcttccaa 118
             |||||||||||||| |||||||||
Sbjct: 67802 ccatctgtgcttcacctcttccaa 67825

>emb|AL355144.16| Human DNA sequence from clone RP5-1027O11 on chromosome 1p22.1-22.3
             Contains a novel gene, complete sequence
          Length = 135311

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 210   tcaaaaataaaccaaactgt 229
             ||||||||||||||||||||
Sbjct: 63500 tcaaaaataaaccaaactgt 63519

>emb|AL162273.13| Human DNA sequence from clone RP11-215N21 on chromosome 10 Contains the
             3' end of a novel gene and a CpG island, complete sequence
          Length = 103011

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 94    tccatctgtgcttcatctct 113
             ||||||||||||||||||||
Sbjct: 32891 tccatctgtgcttcatctct 32872

>emb|Z97023.1|HVZ97023 Hordeum vulgare mRNA encoding cysteine endopeptidase EP-A
          Length = 1299

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 491 actcctccgtggtcatgtcggcga 514
           |||| |||||||||||||||||||
Sbjct: 337 actcgtccgtggtcatgtcggcga 314

>emb|Z97021.1|HVZ97021 Hordeum vulgare gene encoding cysteine endopeptidase EP-A
          Length = 2752

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 491  actcctccgtggtcatgtcggcga 514
            |||| |||||||||||||||||||
Sbjct: 1401 actcgtccgtggtcatgtcggcga 1378

>emb|AL513443.1|NC93G11 Neurospora crassa DNA linkage group V Cosmid contig 93G11
          Length = 86075

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 446   tcgacggcgggcctgatctt 465
             ||||||||||||||||||||
Sbjct: 20871 tcgacggcgggcctgatctt 20852

>gb|AC009386.14| Homo sapiens 12 BAC RP11-447I10 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 164012

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 94    tccatctgtgcttcatctct 113
             ||||||||||||||||||||
Sbjct: 69468 tccatctgtgcttcatctct 69449

>gb|DP000045.1| Pongo pygmaeus target 106 genomic scaffold
          Length = 644818

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 304    ctctccccgccccactcacc 323
              ||||||||||||||||||||
Sbjct: 639655 ctctccccgccccactcacc 639636

>gb|AC158222.6| Mus musculus chromosome 8, clone RP23-117M15, complete sequence
          Length = 207233

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 18    attttcatctcagtttttgttata 41
             |||||||||||||| |||||||||
Sbjct: 65414 attttcatctcagtatttgttata 65391

>gb|AY028080.1| Mus musculus pericentriolar material gene 1 protein (Pcm1) gene,
             partial cds; and acid ceramidase (Asah1) and FSHD Region
             Gene 1 protein (Frg1) genes, complete cds
          Length = 183135

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 18    attttcatctcagtttttgttata 41
             |||||||||||||| |||||||||
Sbjct: 37702 attttcatctcagtatttgttata 37679

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 351      agctgcctggtatgctccat 370
                ||||||||||||||||||||
Sbjct: 20072686 agctgcctggtatgctccat 20072705

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 356      cctggtatgctccatataga 375
                ||||||||||||||||||||
Sbjct: 14225342 cctggtatgctccatataga 14225361

>gb|AF314058.1|AF314058 Homo sapiens chromosome 20 clone GS1-430E01 map 20q12-q13.12,
            complete sequence
          Length = 189656

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 304  ctctccccgccccactcacc 323
            ||||||||||||||||||||
Sbjct: 4673 ctctccccgccccactcacc 4692

>gb|AC018799.8| Homo sapiens BAC clone RP11-125N8 from 2, complete sequence
          Length = 151107

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     ttctggaaatgcatacattt 21
             ||||||||||||||||||||
Sbjct: 11192 ttctggaaatgcatacattt 11173

>dbj|BA000026.2| Mycoplasma penetrans HF-2 DNA, complete genome
          Length = 1358633

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 21     ttcatctcagtttttgttat 40
              ||||||||||||||||||||
Sbjct: 849977 ttcatctcagtttttgttat 849996

>dbj|AP004856.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1570_H12
          Length = 129767

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 356    cctggtatgctccatataga 375
              ||||||||||||||||||||
Sbjct: 125362 cctggtatgctccatataga 125381

>dbj|AP004151.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1008_E02
          Length = 125860

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 356   cctggtatgctccatataga 375
             ||||||||||||||||||||
Sbjct: 30492 cctggtatgctccatataga 30511

>dbj|AP004005.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1188_F05
          Length = 117045

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 351   agctgcctggtatgctccat 370
             ||||||||||||||||||||
Sbjct: 19232 agctgcctggtatgctccat 19251

>dbj|AP005521.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0477F03
          Length = 176120

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 351    agctgcctggtatgctccat 370
              ||||||||||||||||||||
Sbjct: 144537 agctgcctggtatgctccat 144556

>gb|U94591.1|HVU94591 Hordeum vulgare cysteine proteinase precursor, mRNA, complete cds
          Length = 1328

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 491 actcctccgtggtcatgtcggcga 514
           |||| |||||||||||||||||||
Sbjct: 345 actcgtccgtggtcatgtcggcga 322

>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome
          Length = 1751080

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 135     agattttattctggttccagggca 158
               ||||||| ||||||||||||||||
Sbjct: 1381407 agatttttttctggttccagggca 1381384

>emb|AL671733.6| Mouse DNA sequence from clone RP23-83I22 on chromosome 4, complete
              sequence
          Length = 186686

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 3      tctggaaatgcatacatttt 22
              ||||||||||||||||||||
Sbjct: 170140 tctggaaatgcatacatttt 170121

>emb|AL772259.7| Mouse DNA sequence from clone RP23-408D7 on chromosome 4, complete
             sequence
          Length = 48500

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 213   aaaataaaccaaactgtagacaca 236
             |||||||| |||||||||||||||
Sbjct: 17736 aaaataaaacaaactgtagacaca 17759


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,767,237
Number of Sequences: 3902068
Number of extensions: 4767237
Number of successful extensions: 107459
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 107313
Number of HSP's gapped (non-prelim): 146
length of query: 549
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 526
effective length of database: 17,143,297,704
effective search space: 9017374592304
effective search space used: 9017374592304
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)