ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd17f09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DQ201158.1| Hordeum vulgare subsp. vulgare cultivar Morex phy... 1156 0.0
2gb|DQ201141.1| Hordeum vulgare subsp. vulgare cultivar Kompolti ... 593 e-166
3gb|DQ201140.1| Hordeum vulgare subsp. vulgare cultivar Morex phy... 509 e-141
4gb|DQ201139.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo p... 509 e-141
5emb|X03242.1|ASAP3R Avena sativa mRNA for phytochrome (AP3) 319 6e-84
6emb|AJ313099.1|TAE313099 Triticum aestivum phya1 gene for phytoc... 309 6e-81
7emb|X03243.1|ASAP4R Avena sativa mRNA for phytochrome (AP4) 297 2e-77
8gb|M18822.1|ASTPHT3A Avena sativa type 3 phytochrome gene (phy3)... 270 5e-69
9gb|AY466083.1| Sorghum propinquum phytochrome A (PHYA) gene, com... 135 2e-28
10gb|AY466082.1| Sorghum x drummondii voucher PI302233 phytochrome... 135 2e-28
11gb|AY466078.1| Sorghum arundinaceum voucher PI302105 phytochrome... 135 2e-28
12gb|AY106693.1| Zea mays PCO126085 mRNA sequence 131 3e-27
13gb|AY466081.1| Sorghum arundinaceum voucher PI302233 phytochrome... 127 5e-26
14gb|AY466080.1| Sorghum arundinaceum voucher PI225905 phytochrome... 127 5e-26
15gb|AY466077.1| Sorghum arundinaceum voucher IS14567 phytochrome ... 127 5e-26
16gb|AY466076.1| Sorghum arundinaceum voucher IS14503 phytochrome ... 127 5e-26
17gb|AY466073.1| Sorghum bicolor phytochrome A (PHYA) gene, comple... 127 5e-26
18gb|AY466072.1| Sorghum bicolor isolate PHYA-RTx430 phytochrome A... 127 5e-26
19gb|AF369906.1| Sorghum bicolor clone BAC10J22 Sbb3766 sequence 127 5e-26
20dbj|AB109891.1| Oryza sativa (japonica cultivar-group) PHYA mRNA... 123 7e-25
21dbj|AK072482.1| Oryza sativa (japonica cultivar-group) cDNA clon... 123 7e-25
22gb|AY260865.1| Zea mays phytochrome A2 (phyA2) gene, complete cds 119 1e-23
23gb|AY234826.1| Zea mays cultivar B73 phytochrome A1 apoprotein (... 119 1e-23
24gb|AY466079.1| Sorghum arundinaceum voucher IS14485 phytochrome ... 119 1e-23
25gb|AY466075.1| Sorghum arundinaceum voucher PI213900 phytochrome... 119 1e-23
26gb|AY466074.1| Sorghum arundinaceum voucher IS14569 phytochrome ... 119 1e-23
27gb|AY466071.1| Sorghum bicolor voucher NSL83707 phytochrome A (P... 119 1e-23
28gb|AY466070.1| Sorghum bicolor voucher PI152593 phytochrome A (P... 119 1e-23
29gb|AY466069.1| Sorghum bicolor voucher PI229835 phytochrome A (P... 119 1e-23
30gb|U56729.1|SBU56729 Sorghum bicolor phytochrome A (PHYA) mRNA, ... 115 2e-22
31gb|AF377946.3| Oryza sativa (japonica cultivar-group) chromosome... 105 2e-19
32gb|AC147426.2| Oryza sativa chromosome 3 B1377B10 genomic seque... 105 2e-19
33gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 105 2e-19
34dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 105 2e-19
35emb|X14172.1|OSPHY18 Rice phy 18 gene for phytochrome 105 2e-19
36gb|AY466068.1| Sorghum bicolor voucher PI153800 phytochrome A (P... 103 7e-19
37gb|AY466067.1| Sorghum bicolor voucher PI267380 phytochrome A (P... 103 7e-19
38gb|AY761820.1| Sorghum bicolor clone Rtx430 phytochrome A gene, ... 88 4e-14
39gb|AY761819.1| Sorghum arundinaceum clone LWA88 phytochrome A ge... 88 4e-14
40gb|AY761818.1| Sorghum x drummondii clone LWA71 phytochrome A ge... 88 4e-14
41gb|AY761817.1| Sorghum arundinaceum clone LWA55 phytochrome A ge... 88 4e-14
42gb|AY761816.1| Sorghum arundinaceum clone LWA42 phytochrome A ge... 88 4e-14
43gb|AY761814.1| Sorghum arundinaceum clone LWA22 phytochrome A ge... 88 4e-14
44gb|AY761813.1| Sorghum arundinaceum clone LWA13 phytochrome A ge... 88 4e-14
45gb|AY761811.1| Sorghum x drummondii clone LWA12a phytochrome A g... 88 4e-14
46gb|AY761810.1| Sorghum bicolor clone BTx623 phytochrome A gene, ... 88 4e-14
47gb|AY761809.1| Sorghum bicolor clone 87088 phytochrome A gene, p... 88 4e-14
48gb|AY761806.1| Sorghum bicolor clone 77034a phytochrome A gene, ... 88 4e-14
49gb|AY761805.1| Sorghum bicolor clone 55751b phytochrome A gene, ... 88 4e-14
50gb|AY761804.1| Sorghum bicolor clone 55751a phytochrome A gene, ... 88 4e-14
51gb|AY761801.1| Sorghum bicolor clone 51397a phytochrome A gene, ... 88 4e-14
52gb|AY761799.1| Sorghum bicolor clone 51365a phytochrome A gene, ... 88 4e-14
53gb|AY761797.1| Sorghum bicolor clone 510906b phytochrome A gene,... 88 4e-14
54gb|AY761795.1| Sorghum bicolor clone 51032 phytochrome A gene, p... 88 4e-14
55gb|AY761794.1| Sorghum bicolor clone 50875 phytochrome A gene, p... 88 4e-14
56gb|AY761793.1| Sorghum bicolor clone 50744 phytochrome A gene, p... 88 4e-14
57gb|AY761792.1| Sorghum bicolor clone 287624b phytochrome A gene,... 88 4e-14
58gb|AY761790.1| Sorghum bicolor clone 267525 phytochrome A gene, ... 88 4e-14
59gb|AY761789.1| Sorghum bicolor clone 267523 phytochrome A gene, ... 88 4e-14
60gb|AY761787.1| Sorghum bicolor clone 221655 phytochrome A gene, ... 88 4e-14
61gb|AY761785.1| Sorghum bicolor clone 221607a phytochrome A gene,... 88 4e-14
62gb|AY761784.1| Sorghum bicolor clone 221540 phytochrome A gene, ... 88 4e-14
63gb|AY761783.1| Sorghum bicolor clone 22913 phytochrome A gene, p... 88 4e-14
64gb|AY761782.1| Sorghum bicolor clone 213900 phytochrome A gene, ... 88 4e-14
65gb|AY761781.1| Sorghum bicolor clone 152702 phytochrome A gene, ... 88 4e-14
66gb|AY761815.1| Sorghum arundinaceum clone LWA28 phytochrome A ge... 80 1e-11
67gb|AY761812.1| Sorghum x drummondii clone LWA12b phytochrome A g... 80 1e-11
68gb|AY761808.1| Sorghum bicolor clone 83707 phytochrome A gene, p... 80 1e-11
69gb|AY761807.1| Sorghum bicolor clone 77034b phytochrome A gene, ... 80 1e-11
70gb|AY761803.1| Sorghum bicolor clone 51836 phytochrome A gene, p... 80 1e-11
71gb|AY761802.1| Sorghum bicolor clone 51397b phytochrome A gene, ... 80 1e-11
72gb|AY761800.1| Sorghum bicolor clone 51365b phytochrome A gene, ... 80 1e-11
73gb|AY761798.1| Sorghum bicolor clone 510985 phytochrome A gene, ... 80 1e-11
74gb|AY761796.1| Sorghum bicolor clone 510906a phytochrome A gene,... 80 1e-11
75gb|AY761791.1| Sorghum bicolor clone 287624a phytochrome A gene,... 80 1e-11
76gb|AY761788.1| Sorghum bicolor clone 257595 phytochrome A gene, ... 80 1e-11
77gb|AY761786.1| Sorghum bicolor clone 221607b phytochrome A gene,... 80 1e-11
78ref|XM_592363.2| PREDICTED: Bos taurus similar to epidermal grow... 44 0.55
79gb|AC069133.6| Homo sapiens BAC clone RP11-579E24 from 8, comple... 44 0.55
80gb|AC068863.6| Homo sapiens chromosome 2, clone CTD-2170C4, comp... 44 0.55
81gb|AC132597.3| Mus musculus BAC clone RP24-180D17 from chromosom... 42 2.2
82gb|AC148990.6| Mus musculus BAC clone RP24-466N11 from chromosom... 40 8.6
83gb|AC147708.7| Canis Familiaris, clone XX-25G10, complete sequence 40 8.6
84gb|AC148324.2| Mus musculus BAC clone RP24-454N4 from chromosome... 40 8.6
85gb|CP000262.1| Streptococcus pyogenes MGAS10750, complete genome 40 8.6
86gb|AC102358.5| Mus musculus chromosome 8, clone RP23-451H9, comp... 40 8.6
87gb|AC140055.4| Mus musculus BAC clone RP23-52F4 from chromosome ... 40 8.6
88gb|AC124346.3| Mus musculus BAC clone RP24-460E12 from chromosom... 40 8.6
89gb|AC124731.5| Mus musculus BAC clone RP23-287B7 from 3, complet... 40 8.6
90gb|AC121866.2| Mus musculus BAC clone RP24-114G1 from 8, complet... 40 8.6
91gb|AC122730.27| Medicago truncatula clone mth2-36p5, complete se... 40 8.6
92gb|AY267353.1| Chara vulgaris mitochondrion, complete genome 40 8.6
93emb|AL135786.17| Human DNA sequence from clone RP11-12D24 on chr... 40 8.6
94emb|AL136117.12| Human DNA sequence from clone CTC-1333E1 on chr... 40 8.6
95emb|AL132776.11|HSJ393D12 Human DNA sequence from clone RP3-393D... 40 8.6
96emb|Z47978.1|BSL22RPRT B.subtilis gene for ribosomal protein L22 40 8.6
97gb|AC147843.3| Ovis aries clone CH243-261D1, complete sequence 40 8.6
98emb|BX323843.9| Zebrafish DNA sequence from clone CH211-10A23 in... 40 8.6
99gb|AC091167.19| Homo sapiens chromosome 15, clone RP11-697E2, co... 40 8.6
100emb|AL953844.7| Zebrafish DNA sequence from clone DKEY-29G23 in ... 40 8.6
101gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 40 8.6
102gb|AC140230.3| Mus musculus BAC clone RP24-493E4 from 14, comple... 40 8.6 
>gb|DQ201158.1| Hordeum vulgare subsp. vulgare cultivar Morex phytochrome A mRNA,
            partial cds
          Length = 2485

 Score = 1156 bits (583), Expect = 0.0
 Identities = 621/633 (98%), Gaps = 8/633 (1%)
 Strand = Plus / Minus

                                                                        
Query: 2    acttcttatgacca-gtttgcccaagtacatatcacagccataaaacacttacgacgaag 60
            |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 2431 acttcttatgaccaagtttgcccaagtacatatcacagccataaaacacttatgacgaag 2372

                                                                        
Query: 61   catcaaacttgaaccttacacatacatattacatagtaggacggacgagaagaacacaac 120
            ||||||||||||||||||||||||||||       |||||||||||||||||||||||||
Sbjct: 2371 catcaaacttgaaccttacacatacata-------gtaggacggacgagaagaacacaac 2319

                                                                        
Query: 121  aacacatcacaagtacgtaaccaaaccgtgccacacaaccttcctttaccctagactgat 180
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2318 aacacagcacaagtacgtaaccaaaccgtgccacacaaccttcctttaccctagactgat 2259

                                                                        
Query: 181  aactgatcctacaggccaacctttgcttcttcctttctgcattcacttaacactctacca 240
            ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 2258 aactgatcctacaggccaacctttgcttctttctttctgcattcacttaacactctacca 2199

                                                                        
Query: 241  cagcctgctgcaaccgcgtcgcatcttccccgcaagtcatcaccgtcgttcgctcatggt 300
            |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 2198 cagcctgctgcaaccgcgccgcatcttccccgcaagtcatcaccgtcgttcgctcatggt 2139

                                                                        
Query: 301  tctttcgaaatgaagcatctgatgaccatgtgttgcacttgcttcttcatcactgcctca 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2138 tctttcgaaatgaagcatctgatgaccatgtgttgcacttgcttcttcatcactgcctca 2079

                                                                        
Query: 361  ttgccgttggagcacaagcaagttcggcggtgaggatgaagattgacataccggcttccc 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2078 ttgccgttggagcacaagcaagttcggcggtgaggatgaagattgacataccggcttccc 2019

                                                                        
Query: 421  ttaggtgacgaacatcgccgttcatgagcctcaacaggtttctagaaactaggaggccca 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2018 ttaggtgacgaacatcgccgttcatgagcctcaacaggtttctagaaactaggaggccca 1959

                                                                        
Query: 481  agccctcctctgactgctccgtgttctcctcctcaaacatttgcgccatcagctctgctg 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1958 agccctcctctgactgctccgtgttctcctcctcaaacatttgcgccatcagctctgctg 1899

                                                                        
Query: 541  ggactcctaatccccggtgcttgatcctaagttcaagatcaataaggtgaagattctctc 600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1898 ggactcctaatccccggtgcttgatcctaagttcaagatcaataaggtgaagattctctc 1839

                                             
Query: 601  cgatgctgttcttcgtcgcctgggctgaaatct 633
            |||||||||||||||||||||||||||||||||
Sbjct: 1838 cgatgctgttcttcgtcgcctgggctgaaatct 1806
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>gb|DQ201141.1| Hordeum vulgare subsp. vulgare cultivar Kompolti korai phytochrome A
            (PhyA) gene, complete cds
          Length = 6659

 Score =  593 bits (299), Expect = e-166
 Identities = 299/299 (100%)
 Strand = Plus / Minus

                                                                        
Query: 18   ttgcccaagtacatatcacagccataaaacacttacgacgaagcatcaaacttgaacctt 77
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6659 ttgcccaagtacatatcacagccataaaacacttacgacgaagcatcaaacttgaacctt 6600

                                                                        
Query: 78   acacatacatattacatagtaggacggacgagaagaacacaacaacacatcacaagtacg 137
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6599 acacatacatattacatagtaggacggacgagaagaacacaacaacacatcacaagtacg 6540

                                                                        
Query: 138  taaccaaaccgtgccacacaaccttcctttaccctagactgataactgatcctacaggcc 197
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6539 taaccaaaccgtgccacacaaccttcctttaccctagactgataactgatcctacaggcc 6480

                                                                        
Query: 198  aacctttgcttcttcctttctgcattcacttaacactctaccacagcctgctgcaaccgc 257
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6479 aacctttgcttcttcctttctgcattcacttaacactctaccacagcctgctgcaaccgc 6420

                                                                       
Query: 258  gtcgcatcttccccgcaagtcatcaccgtcgttcgctcatggttctttcgaaatgaagc 316
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6419 gtcgcatcttccccgcaagtcatcaccgtcgttcgctcatggttctttcgaaatgaagc 6361



 Score =  502 bits (253), Expect = e-139
 Identities = 253/253 (100%)
 Strand = Plus / Minus

                                                                        
Query: 316  catctgatgaccatgtgttgcacttgcttcttcatcactgcctcattgccgttggagcac 375
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5870 catctgatgaccatgtgttgcacttgcttcttcatcactgcctcattgccgttggagcac 5811

                                                                        
Query: 376  aagcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacat 435
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5810 aagcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacat 5751

                                                                        
Query: 436  cgccgttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgact 495
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5750 cgccgttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgact 5691

                                                                        
Query: 496  gctccgtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatcccc 555
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5690 gctccgtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatcccc 5631

                         
Query: 556  ggtgcttgatcct 568
            |||||||||||||
Sbjct: 5630 ggtgcttgatcct 5618



 Score =  135 bits (68), Expect = 2e-28
 Identities = 68/68 (100%)
 Strand = Plus / Minus

                                                                        
Query: 566  cctaagttcaagatcaataaggtgaagattctctccgatgctgttcttcgtcgcctgggc 625
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5515 cctaagttcaagatcaataaggtgaagattctctccgatgctgttcttcgtcgcctgggc 5456

                    
Query: 626  tgaaatct 633
            ||||||||
Sbjct: 5455 tgaaatct 5448
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>gb|DQ201140.1| Hordeum vulgare subsp. vulgare cultivar Morex phytochrome A (PhyA)
            gene, complete cds
          Length = 6652

 Score =  509 bits (257), Expect = e-141
 Identities = 288/299 (96%), Gaps = 7/299 (2%)
 Strand = Plus / Minus

                                                                        
Query: 18   ttgcccaagtacatatcacagccataaaacacttacgacgaagcatcaaacttgaacctt 77
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 6652 ttgcccaagtacatatcacagccataaaacacttatgacgaagcatcaaacttgaacctt 6593

                                                                        
Query: 78   acacatacatattacatagtaggacggacgagaagaacacaacaacacatcacaagtacg 137
            |||||||||||       ||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 6592 acacatacata-------gtaggacggacgagaagaacacaacaacacagcacaagtacg 6540

                                                                        
Query: 138  taaccaaaccgtgccacacaaccttcctttaccctagactgataactgatcctacaggcc 197
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6539 taaccaaaccgtgccacacaaccttcctttaccctagactgataactgatcctacaggcc 6480

                                                                        
Query: 198  aacctttgcttcttcctttctgcattcacttaacactctaccacagcctgctgcaaccgc 257
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6479 aacctttgcttctttctttctgcattcacttaacactctaccacagcctgctgcaaccgc 6420

                                                                       
Query: 258  gtcgcatcttccccgcaagtcatcaccgtcgttcgctcatggttctttcgaaatgaagc 316
            | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6419 gccgcatcttccccgcaagtcatcaccgtcgttcgctcatggttctttcgaaatgaagc 6361



 Score =  502 bits (253), Expect = e-139
 Identities = 253/253 (100%)
 Strand = Plus / Minus

                                                                        
Query: 316  catctgatgaccatgtgttgcacttgcttcttcatcactgcctcattgccgttggagcac 375
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5870 catctgatgaccatgtgttgcacttgcttcttcatcactgcctcattgccgttggagcac 5811

                                                                        
Query: 376  aagcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacat 435
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5810 aagcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacat 5751

                                                                        
Query: 436  cgccgttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgact 495
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5750 cgccgttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgact 5691

                                                                        
Query: 496  gctccgtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatcccc 555
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5690 gctccgtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatcccc 5631

                         
Query: 556  ggtgcttgatcct 568
            |||||||||||||
Sbjct: 5630 ggtgcttgatcct 5618



 Score =  135 bits (68), Expect = 2e-28
 Identities = 68/68 (100%)
 Strand = Plus / Minus

                                                                        
Query: 566  cctaagttcaagatcaataaggtgaagattctctccgatgctgttcttcgtcgcctgggc 625
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5515 cctaagttcaagatcaataaggtgaagattctctccgatgctgttcttcgtcgcctgggc 5456

                    
Query: 626  tgaaatct 633
            ||||||||
Sbjct: 5455 tgaaatct 5448
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>gb|DQ201139.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo phytochrome A (PhyA)
            gene, complete cds
          Length = 6652

 Score =  509 bits (257), Expect = e-141
 Identities = 288/299 (96%), Gaps = 7/299 (2%)
 Strand = Plus / Minus

                                                                        
Query: 18   ttgcccaagtacatatcacagccataaaacacttacgacgaagcatcaaacttgaacctt 77
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 6652 ttgcccaagtacatatcacagccataaaacacttatgacgaagcatcaaacttgaacctt 6593

                                                                        
Query: 78   acacatacatattacatagtaggacggacgagaagaacacaacaacacatcacaagtacg 137
            |||||||||||       ||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 6592 acacatacata-------gtaggacggacgagaagaacacaacaacacagcacaagtacg 6540

                                                                        
Query: 138  taaccaaaccgtgccacacaaccttcctttaccctagactgataactgatcctacaggcc 197
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6539 taaccaaaccgtgccacacaaccttcctttaccctagactgataactgatcctacaggcc 6480

                                                                        
Query: 198  aacctttgcttcttcctttctgcattcacttaacactctaccacagcctgctgcaaccgc 257
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6479 aacctttgcttctttctttctgcattcacttaacactctaccacagcctgctgcaaccgc 6420

                                                                       
Query: 258  gtcgcatcttccccgcaagtcatcaccgtcgttcgctcatggttctttcgaaatgaagc 316
            | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6419 gccgcatcttccccgcaagtcatcaccgtcgttcgctcatggttctttcgaaatgaagc 6361



 Score =  502 bits (253), Expect = e-139
 Identities = 253/253 (100%)
 Strand = Plus / Minus

                                                                        
Query: 316  catctgatgaccatgtgttgcacttgcttcttcatcactgcctcattgccgttggagcac 375
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5870 catctgatgaccatgtgttgcacttgcttcttcatcactgcctcattgccgttggagcac 5811

                                                                        
Query: 376  aagcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacat 435
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5810 aagcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacat 5751

                                                                        
Query: 436  cgccgttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgact 495
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5750 cgccgttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgact 5691

                                                                        
Query: 496  gctccgtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatcccc 555
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5690 gctccgtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatcccc 5631

                         
Query: 556  ggtgcttgatcct 568
            |||||||||||||
Sbjct: 5630 ggtgcttgatcct 5618



 Score =  135 bits (68), Expect = 2e-28
 Identities = 68/68 (100%)
 Strand = Plus / Minus

                                                                        
Query: 566  cctaagttcaagatcaataaggtgaagattctctccgatgctgttcttcgtcgcctgggc 625
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5515 cctaagttcaagatcaataaggtgaagattctctccgatgctgttcttcgtcgcctgggc 5456

                    
Query: 626  tgaaatct 633
            ||||||||
Sbjct: 5455 tgaaatct 5448
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>emb|X03242.1|ASAP3R Avena sativa mRNA for phytochrome (AP3)
          Length = 3696

 Score =  319 bits (161), Expect = 6e-84
 Identities = 242/269 (89%)
 Strand = Plus / Minus

                                                                        
Query: 345  cttcatcactgcctcattgccgttggagcacaagcaagttcggcggtgaggatgaagatt 404
            |||||||| || | |||||| ||||||||  |||||||||| ||||||| ||||||| ||
Sbjct: 3452 cttcatcattgtcccattgctgttggagcggaagcaagttcagcggtgatgatgaaggtt 3393

                                                                        
Query: 405  gacataccggcttcccttaggtgacgaacatcgccgttcatgagcctcaacaggtttcta 464
            |||| ||| ||||||||||| || |||||||| || ||||||||||||| ||||||||||
Sbjct: 3392 gacacaccagcttcccttagatgccgaacatcaccattcatgagcctcagcaggtttcta 3333

                                                                        
Query: 465  gaaactaggaggcccaagccctcctctgactgctccgtgttctcctcctcaaacatttgc 524
            ||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||| 
Sbjct: 3332 gaaactaggaggctcaagccctcctctgactgctccttgttgtcctcctcaaacatttgt 3273

                                                                        
Query: 525  gccatcagctctgctgggactcctaatccccggtgcttgatcctaagttcaagatcaata 584
            ||||| |||||||||||||||||||||||  |||||||||||||||||||||| ||||||
Sbjct: 3272 gccatgagctctgctgggactcctaatccttggtgcttgatcctaagttcaaggtcaata 3213

                                         
Query: 585  aggtgaagattctctccgatgctgttctt 613
            || ||||| || |||||||||||||||||
Sbjct: 3212 agatgaaggttttctccgatgctgttctt 3184



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 63   tcaaacttgaaccttacaca 82
            ||||||||||||||||||||
Sbjct: 3651 tcaaacttgaaccttacaca 3632
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>emb|AJ313099.1|TAE313099 Triticum aestivum phya1 gene for phytochrome A, exons 1-4
          Length = 6323

 Score =  309 bits (156), Expect = 6e-81
 Identities = 216/236 (91%)
 Strand = Plus / Minus

                                                                        
Query: 333  ttgcacttgcttcttcatcactgcctcattgccgttggagcacaagcaagttcggcggtg 392
            ||||||| |||||||||||| |||  ||| ||||||||||||||||||||||||||||||
Sbjct: 6000 ttgcactggcttcttcatcagtgctccatggccgttggagcacaagcaagttcggcggtg 5941

                                                                        
Query: 393  aggatgaagattgacataccggcttcccttaggtgacgaacatcgccgttcatgagcctc 452
            |||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 5940 aggatgaagattgacacaccagcttcccttaggtgacgaacatcgccattcatgagcctc 5881

                                                                        
Query: 453  aacaggtttctagaaactaggaggcccaagccctcctctgactgctccgtgttctcctcc 512
            ||||||||||| || || |||||||||||||||||||||||||||| ||  |  ||||||
Sbjct: 5880 aacaggtttctggagaccaggaggcccaagccctcctctgactgctgcggctcgtcctcc 5821

                                                                    
Query: 513  tcaaacatttgcgccatcagctctgctgggactcctaatccccggtgcttgatcct 568
            |||||||| |||||||| |||||||| ||||||||||||||| |||||||||||||
Sbjct: 5820 tcaaacatctgcgccattagctctgcagggactcctaatccctggtgcttgatcct 5765



 Score =  111 bits (56), Expect = 3e-21
 Identities = 65/68 (95%)
 Strand = Plus / Minus

                                                                        
Query: 566  cctaagttcaagatcaataaggtgaagattctctccgatgctgttcttcgtcgcctgggc 625
            |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct: 5662 cctaagttcaaggtcaataaggtgaagattctctccgatgctgttctttgtcgccttggc 5603

                    
Query: 626  tgaaatct 633
            ||||||||
Sbjct: 5602 tgaaatct 5595
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>emb|X03243.1|ASAP4R Avena sativa mRNA for phytochrome (AP4)
          Length = 3705

 Score =  297 bits (150), Expect = 2e-77
 Identities = 263/300 (87%), Gaps = 3/300 (1%)
 Strand = Plus / Minus

                                                                        
Query: 318  tctgatgaccatgtgttgcacttgcttcttcatcactgcctcattgccgttggagcacaa 377
            |||||||||||| ||||||||| ||||| ||||   || |  ||||| ||||||||  ||
Sbjct: 3476 tctgatgaccatatgttgcactggcttcatcat---tgtccgattgctgttggagccgaa 3420

                                                                        
Query: 378  gcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacatcg 437
            |||||||| ||||||||||||||| ||||||  || ||||||||||| || |||||||| 
Sbjct: 3419 gcaagttcagcggtgaggatgaaggttgacacgccagcttcccttagatgccgaacatcc 3360

                                                                        
Query: 438  ccgttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactgc 497
            || ||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 3359 ccattcatgagcctcagcagctttctagaaactaggaggcccaagccctcatctgactgc 3300

                                                                        
Query: 498  tccgtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccgg 557
            ||| |||| |||||||||||||| ||  |||| || ||||||||||||||||||||| ||
Sbjct: 3299 tccttgttgtcctcctcaaacatctgttccatgagttctgctgggactcctaatccctgg 3240

                                                                        
Query: 558  tgcttgatcctaagttcaagatcaataaggtgaagattctctccgatgctgttcttcgtc 617
            ||||||||||||||||| || |||||||| ||||| || |||||||||||||||||||||
Sbjct: 3239 tgcttgatcctaagttctaggtcaataagatgaaggttttctccgatgctgttcttcgtc 3180
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>gb|M18822.1|ASTPHT3A Avena sativa type 3 phytochrome gene (phy3), complete cds
          Length = 6746

 Score =  270 bits (136), Expect = 5e-69
 Identities = 202/224 (90%)
 Strand = Plus / Minus

                                                                        
Query: 345  cttcatcactgcctcattgccgttggagcacaagcaagttcggcggtgaggatgaagatt 404
            |||||||| || | |||||| ||||||||  |||||||||| ||||||| ||||||| ||
Sbjct: 6434 cttcatcattgtcccattgctgttggagcggaagcaagttcagcggtgatgatgaaggtt 6375

                                                                        
Query: 405  gacataccggcttcccttaggtgacgaacatcgccgttcatgagcctcaacaggtttcta 464
            |||| ||| ||||||||||| || |||||||| || ||||||||||||| ||||||||||
Sbjct: 6374 gacacaccagcttcccttagatgccgaacatcaccattcatgagcctcagcaggtttcta 6315

                                                                        
Query: 465  gaaactaggaggcccaagccctcctctgactgctccgtgttctcctcctcaaacatttgc 524
            ||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||| 
Sbjct: 6314 gaaactaggaggctcaagccctcctctgactgctccttgttgtcctcctcaaacatttgt 6255

                                                        
Query: 525  gccatcagctctgctgggactcctaatccccggtgcttgatcct 568
            ||||| |||||||||||||||||||||||| |||||||||||||
Sbjct: 6254 gccatgagctctgctgggactcctaatccctggtgcttgatcct 6211



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                            
Query: 566  cctaagttcaagatcaataaggtgaagattctctccgatgctgttctt 613
            |||||||||||| |||||||| ||||| || |||||||||||||||||
Sbjct: 6075 cctaagttcaaggtcaataagatgaaggttttctccgatgctgttctt 6028
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>gb|AY466083.1| Sorghum propinquum phytochrome A (PHYA) gene, complete cds
          Length = 3834

 Score =  135 bits (68), Expect = 2e-28
 Identities = 161/192 (83%)
 Strand = Plus / Minus

                                                                        
Query: 377  agcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacatc 436
            ||||||||| || |||||||||||| ||||||| || |||||||| ||||||||||  ||
Sbjct: 3807 agcaagttcagcagtgaggatgaaggttgacatgccagcttccctgaggtgacgaatgtc 3748

                                                                        
Query: 437  gccgttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactg 496
             || |||||||||||||  |||||||||||||| || |||| ||| ||||||||||||||
Sbjct: 3747 accattcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgactg 3688

                                                                        
Query: 497  ctccgtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccg 556
            |||  | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |
Sbjct: 3687 ctctttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttg 3628

                        
Query: 557  gtgcttgatcct 568
            ||||||||||||
Sbjct: 3627 gtgcttgatcct 3616
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>gb|AY466082.1| Sorghum x drummondii voucher PI302233 phytochrome A (PHYA) gene,
            complete cds
          Length = 3834

 Score =  135 bits (68), Expect = 2e-28
 Identities = 161/192 (83%)
 Strand = Plus / Minus

                                                                        
Query: 377  agcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacatc 436
            ||||||||| || |||||||||||| ||||||| || |||||||| ||||||||||  ||
Sbjct: 3807 agcaagttcagcagtgaggatgaaggttgacatgccagcttccctgaggtgacgaatgtc 3748

                                                                        
Query: 437  gccgttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactg 496
             || |||||||||||||  |||||||||||||| || |||| ||| ||||||||||||||
Sbjct: 3747 accattcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgactg 3688

                                                                        
Query: 497  ctccgtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccg 556
            |||  | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |
Sbjct: 3687 ctctttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttg 3628

                        
Query: 557  gtgcttgatcct 568
            ||||||||||||
Sbjct: 3627 gtgcttgatcct 3616
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>gb|AY466078.1| Sorghum arundinaceum voucher PI302105 phytochrome A (PHYA) gene,
            complete cds
          Length = 3834

 Score =  135 bits (68), Expect = 2e-28
 Identities = 161/192 (83%)
 Strand = Plus / Minus

                                                                        
Query: 377  agcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacatc 436
            ||||||||| || |||||||||||| ||||||| || |||||||| ||||||||||  ||
Sbjct: 3807 agcaagttcagcagtgaggatgaaggttgacatgccagcttccctgaggtgacgaatgtc 3748

                                                                        
Query: 437  gccgttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactg 496
             || |||||||||||||  |||||||||||||| || |||| ||| ||||||||||||||
Sbjct: 3747 accattcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgactg 3688

                                                                        
Query: 497  ctccgtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccg 556
            |||  | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |
Sbjct: 3687 ctctttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttg 3628

                        
Query: 557  gtgcttgatcct 568
            ||||||||||||
Sbjct: 3627 gtgcttgatcct 3616
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>gb|AY106693.1| Zea mays PCO126085 mRNA sequence
          Length = 907

 Score =  131 bits (66), Expect = 3e-27
 Identities = 162/194 (83%)
 Strand = Plus / Minus

                                                                       
Query: 381 agttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacatcgccg 440
           ||||| || |||||||||||| ||||||| || |||||||| ||||||||||  ||||| 
Sbjct: 353 agttcagcagtgaggatgaaggttgacatgccagcttccctgaggtgacgaatgtcgcca 294

                                                                       
Query: 441 ttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactgctcc 500
           |||||||||||||  |||||||||||||| ||||||| |||||||||||| ||||| || 
Sbjct: 293 ttcatgagcctcagaaggtttctagaaacaaggaggctcaagccctcctccgactgttct 234

                                                                       
Query: 501 gtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccggtgc 560
            | || |||||| || |||| || | ||  |  |||||||||||||||  |||  |||||
Sbjct: 233 ctattgtcctccccatacatctgtgacagtatttctgctgggactcctgctccttggtgc 174

                         
Query: 561 ttgatcctaagttc 574
           ||||||||||||||
Sbjct: 173 ttgatcctaagttc 160
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>gb|AY466081.1| Sorghum arundinaceum voucher PI302233 phytochrome A (PHYA) gene,
            complete cds
          Length = 3834

 Score =  127 bits (64), Expect = 5e-26
 Identities = 160/192 (83%)
 Strand = Plus / Minus

                                                                        
Query: 377  agcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacatc 436
            ||||||||| || |||||||||||| ||||||| || |||||||| ||||||||||  | 
Sbjct: 3807 agcaagttcagcagtgaggatgaaggttgacatgccagcttccctgaggtgacgaatgtt 3748

                                                                        
Query: 437  gccgttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactg 496
             || |||||||||||||  |||||||||||||| || |||| ||| ||||||||||||||
Sbjct: 3747 accattcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgactg 3688

                                                                        
Query: 497  ctccgtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccg 556
            |||  | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |
Sbjct: 3687 ctctttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttg 3628

                        
Query: 557  gtgcttgatcct 568
            ||||||||||||
Sbjct: 3627 gtgcttgatcct 3616
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>gb|AY466080.1| Sorghum arundinaceum voucher PI225905 phytochrome A (PHYA) gene,
            complete cds
          Length = 3834

 Score =  127 bits (64), Expect = 5e-26
 Identities = 160/192 (83%)
 Strand = Plus / Minus

                                                                        
Query: 377  agcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacatc 436
            ||||||||| || |||||||||||| ||||||| || |||||||| ||||||||||  | 
Sbjct: 3807 agcaagttcagcagtgaggatgaaggttgacatgccagcttccctgaggtgacgaatgtt 3748

                                                                        
Query: 437  gccgttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactg 496
             || |||||||||||||  |||||||||||||| || |||| ||| ||||||||||||||
Sbjct: 3747 accattcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgactg 3688

                                                                        
Query: 497  ctccgtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccg 556
            |||  | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |
Sbjct: 3687 ctctttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttg 3628

                        
Query: 557  gtgcttgatcct 568
            ||||||||||||
Sbjct: 3627 gtgcttgatcct 3616
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>gb|AY466077.1| Sorghum arundinaceum voucher IS14567 phytochrome A (PHYA) gene,
            complete cds
          Length = 3834

 Score =  127 bits (64), Expect = 5e-26
 Identities = 160/192 (83%)
 Strand = Plus / Minus

                                                                        
Query: 377  agcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacatc 436
            ||||||||| || |||||||||||| ||||||| || |||||||| ||||||||||  ||
Sbjct: 3807 agcaagttcagcagtgaggatgaaggttgacatgccagcttccctgaggtgacgaatgtc 3748

                                                                        
Query: 437  gccgttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactg 496
             || |||||||||||||  |||||||||||||| || |||| ||| ||||||||||||||
Sbjct: 3747 accattcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgactg 3688

                                                                        
Query: 497  ctccgtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccg 556
            |||  | || ||||||||| ||||||| | ||  |  ||||| |||||||||  |||  |
Sbjct: 3687 ctctttattgtcctcctcatacatttgtgacaatatttctgcggggactcctgctccttg 3628

                        
Query: 557  gtgcttgatcct 568
            ||||||||||||
Sbjct: 3627 gtgcttgatcct 3616
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>gb|AY466076.1| Sorghum arundinaceum voucher IS14503 phytochrome A (PHYA) gene,
            complete cds
          Length = 3834

 Score =  127 bits (64), Expect = 5e-26
 Identities = 160/192 (83%)
 Strand = Plus / Minus

                                                                        
Query: 377  agcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacatc 436
            ||||||||| || |||||||||||| ||||||| || |||||||| ||||||||||  | 
Sbjct: 3807 agcaagttcagcagtgaggatgaaggttgacatgccagcttccctgaggtgacgaatgtt 3748

                                                                        
Query: 437  gccgttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactg 496
             || |||||||||||||  |||||||||||||| || |||| ||| ||||||||||||||
Sbjct: 3747 accattcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgactg 3688

                                                                        
Query: 497  ctccgtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccg 556
            |||  | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |
Sbjct: 3687 ctctttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttg 3628

                        
Query: 557  gtgcttgatcct 568
            ||||||||||||
Sbjct: 3627 gtgcttgatcct 3616
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>gb|AY466073.1| Sorghum bicolor phytochrome A (PHYA) gene, complete cds
          Length = 3834

 Score =  127 bits (64), Expect = 5e-26
 Identities = 160/192 (83%)
 Strand = Plus / Minus

                                                                        
Query: 377  agcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacatc 436
            ||||||||| || |||||||||||| ||||||| || |||||||| ||||||||||  | 
Sbjct: 3807 agcaagttcagcagtgaggatgaaggttgacatgccagcttccctgaggtgacgaatgtt 3748

                                                                        
Query: 437  gccgttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactg 496
             || |||||||||||||  |||||||||||||| || |||| ||| ||||||||||||||
Sbjct: 3747 accattcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgactg 3688

                                                                        
Query: 497  ctccgtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccg 556
            |||  | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |
Sbjct: 3687 ctctttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttg 3628

                        
Query: 557  gtgcttgatcct 568
            ||||||||||||
Sbjct: 3627 gtgcttgatcct 3616
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>gb|AY466072.1| Sorghum bicolor isolate PHYA-RTx430 phytochrome A (PHYA) gene,
            complete cds
          Length = 3834

 Score =  127 bits (64), Expect = 5e-26
 Identities = 160/192 (83%)
 Strand = Plus / Minus

                                                                        
Query: 377  agcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacatc 436
            ||||||||| || |||||||||||| ||||||| || |||||||| ||||||||||  | 
Sbjct: 3807 agcaagttcagcagtgaggatgaaggttgacatgccagcttccctgaggtgacgaatgtt 3748

                                                                        
Query: 437  gccgttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactg 496
             || |||||||||||||  |||||||||||||| || |||| ||| ||||||||||||||
Sbjct: 3747 accattcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgactg 3688

                                                                        
Query: 497  ctccgtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccg 556
            |||  | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |
Sbjct: 3687 ctctttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttg 3628

                        
Query: 557  gtgcttgatcct 568
            ||||||||||||
Sbjct: 3627 gtgcttgatcct 3616
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>gb|AF369906.1| Sorghum bicolor clone BAC10J22 Sbb3766 sequence
          Length = 152439

 Score =  127 bits (64), Expect = 5e-26
 Identities = 160/192 (83%)
 Strand = Plus / Plus

                                                                          
Query: 377    agcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacatc 436
              ||||||||| || |||||||||||| ||||||| || |||||||| ||||||||||  | 
Sbjct: 134104 agcaagttcagcagtgaggatgaaggttgacatgccagcttccctgaggtgacgaatgtt 134163

                                                                          
Query: 437    gccgttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactg 496
               || |||||||||||||  |||||||||||||| || |||| ||| ||||||||||||||
Sbjct: 134164 accattcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgactg 134223

                                                                          
Query: 497    ctccgtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccg 556
              |||  | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |
Sbjct: 134224 ctctttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttg 134283

                          
Query: 557    gtgcttgatcct 568
              ||||||||||||
Sbjct: 134284 gtgcttgatcct 134295
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>dbj|AB109891.1| Oryza sativa (japonica cultivar-group) PHYA mRNA for phytochrome A,
            complete cds
          Length = 3866

 Score =  123 bits (62), Expect = 7e-25
 Identities = 200/246 (81%)
 Strand = Plus / Minus

                                                                        
Query: 368  tggagcacaagcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtg 427
            ||||||| ||||||||||| || ||||||||||| ||||||| || |||||||| |  ||
Sbjct: 3522 tggagcagaagcaagttcgacgctgaggatgaaggttgacatgccagcttccctcatatg 3463

                                                                        
Query: 428  acgaacatcgccgttcatgagcctcaacaggtttctagaaactaggaggcccaagccctc 487
             || |||||||| ||||||||||||| |||||||||||||||    || | || ||| ||
Sbjct: 3462 tcggacatcgccattcatgagcctcagcaggtttctagaaaccgcaagactcatgccttc 3403

                                                                        
Query: 488  ctctgactgctccgtgttctcctcctcaaacatttgcgccatcagctctgctgggactcc 547
             || ||||||||| | || || |||||  ||||||| | || ||| ||||||||||||||
Sbjct: 3402 atccgactgctccttattgtcatcctcgtacatttgtgacagcagatctgctgggactcc 3343

                                                                        
Query: 548  taatccccggtgcttgatcctaagttcaagatcaataaggtgaagattctctccgatgct 607
            |   ||| ||||||||||||||||||| || || || || ||||| || || || |||||
Sbjct: 3342 tttgccctggtgcttgatcctaagttctaggtctatgagatgaaggttttccccaatgct 3283

                  
Query: 608  gttctt 613
            ||||||
Sbjct: 3282 gttctt 3277
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>dbj|AK072482.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125J06, full
            insert sequence
          Length = 3903

 Score =  123 bits (62), Expect = 7e-25
 Identities = 200/246 (81%)
 Strand = Plus / Minus

                                                                        
Query: 368  tggagcacaagcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtg 427
            ||||||| ||||||||||| || ||||||||||| ||||||| || |||||||| |  ||
Sbjct: 3570 tggagcagaagcaagttcgacgctgaggatgaaggttgacatgccagcttccctcatatg 3511

                                                                        
Query: 428  acgaacatcgccgttcatgagcctcaacaggtttctagaaactaggaggcccaagccctc 487
             || |||||||| ||||||||||||| |||||||||||||||    || | || ||| ||
Sbjct: 3510 tcggacatcgccattcatgagcctcagcaggtttctagaaaccgcaagactcatgccttc 3451

                                                                        
Query: 488  ctctgactgctccgtgttctcctcctcaaacatttgcgccatcagctctgctgggactcc 547
             || ||||||||| | || || |||||  ||||||| | || ||| ||||||||||||||
Sbjct: 3450 atccgactgctccttattgtcatcctcgtacatttgtgacagcagatctgctgggactcc 3391

                                                                        
Query: 548  taatccccggtgcttgatcctaagttcaagatcaataaggtgaagattctctccgatgct 607
            |   ||| ||||||||||||||||||| || || || || ||||| || || || |||||
Sbjct: 3390 tttgccctggtgcttgatcctaagttctaggtctatgagatgaaggttttccccaatgct 3331

                  
Query: 608  gttctt 613
            ||||||
Sbjct: 3330 gttctt 3325
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>gb|AY260865.1| Zea mays phytochrome A2 (phyA2) gene, complete cds
          Length = 6700

 Score =  119 bits (60), Expect = 1e-23
 Identities = 159/192 (82%)
 Strand = Plus / Minus

                                                                        
Query: 377  agcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacatc 436
            ||||||||| || ||||| |||||| ||||||| || |||||||| ||||||||||  ||
Sbjct: 5774 agcaagttcagcagtgagaatgaaggttgacatgccagcttccctgaggtgacgaatgtc 5715

                                                                        
Query: 437  gccgttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactg 496
             || |||||||||||||  ||||||||||||||    ||||  |||||||||||||||||
Sbjct: 5714 accattcatgagcctcagaaggtttctagaaacagcaaggctgaagccctcctctgactg 5655

                                                                        
Query: 497  ctccgtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccg 556
            |||  | || ||||||||| ||||||||| ||  |  || ||||||||||||  ||| ||
Sbjct: 5654 ctctttattgtcctcctcatacatttgcgacaatatttccgctgggactcctgctcctcg 5595

                        
Query: 557  gtgcttgatcct 568
            ||||||||||||
Sbjct: 5594 gtgcttgatcct 5583
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>gb|AY234826.1| Zea mays cultivar B73 phytochrome A1 apoprotein (phyA1) gene,
            complete cds
          Length = 8510

 Score =  119 bits (60), Expect = 1e-23
 Identities = 102/116 (87%)
 Strand = Plus / Minus

                                                                        
Query: 381  agttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacatcgccg 440
            ||||| || |||||||||||| ||||||| || |||||||| ||||||||||  ||||| 
Sbjct: 7028 agttcagcagtgaggatgaaggttgacatgccagcttccctgaggtgacgaatgtcgcca 6969

                                                                    
Query: 441  ttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactg 496
            |||||||||||||  |||||||||||||| ||||||| |||||||||||| |||||
Sbjct: 6968 ttcatgagcctcagaaggtttctagaaacaaggaggctcaagccctcctccgactg 6913
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>gb|AY466079.1| Sorghum arundinaceum voucher IS14485 phytochrome A (PHYA) gene,
            complete cds
          Length = 3834

 Score =  119 bits (60), Expect = 1e-23
 Identities = 159/192 (82%)
 Strand = Plus / Minus

                                                                        
Query: 377  agcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacatc 436
            ||||||||| || |||||||||||| ||||||| || |||||||| | ||||||||  ||
Sbjct: 3807 agcaagttcagcagtgaggatgaaggttgacatgccagcttccctgatgtgacgaatgtc 3748

                                                                        
Query: 437  gccgttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactg 496
             || |||||||||||||  |||||||||||||| || |||| ||| ||||||||||||||
Sbjct: 3747 accattcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgactg 3688

                                                                        
Query: 497  ctccgtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccg 556
            |||  | || ||||||||| ||||||| | ||  |  ||||| |||||||||  |||  |
Sbjct: 3687 ctctttattgtcctcctcatacatttgtgacaatatttctgcggggactcctgctccttg 3628

                        
Query: 557  gtgcttgatcct 568
            ||||||||||||
Sbjct: 3627 gtgcttgatcct 3616
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>gb|AY466075.1| Sorghum arundinaceum voucher PI213900 phytochrome A (PHYA) gene,
            complete cds
          Length = 3834

 Score =  119 bits (60), Expect = 1e-23
 Identities = 159/192 (82%)
 Strand = Plus / Minus

                                                                        
Query: 377  agcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacatc 436
            ||||||||| || |||||||||||| ||||||| || |||||||| | ||||||||  | 
Sbjct: 3807 agcaagttcagcagtgaggatgaaggttgacatgccagcttccctgatgtgacgaatgtt 3748

                                                                        
Query: 437  gccgttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactg 496
             || |||||||||||||  |||||||||||||| || |||| ||| ||||||||||||||
Sbjct: 3747 accattcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgactg 3688

                                                                        
Query: 497  ctccgtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccg 556
            |||  | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |
Sbjct: 3687 ctctttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttg 3628

                        
Query: 557  gtgcttgatcct 568
            ||||||||||||
Sbjct: 3627 gtgcttgatcct 3616
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>gb|AY466074.1| Sorghum arundinaceum voucher IS14569 phytochrome A (PHYA) gene,
            complete cds
          Length = 3834

 Score =  119 bits (60), Expect = 1e-23
 Identities = 159/192 (82%)
 Strand = Plus / Minus

                                                                        
Query: 377  agcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacatc 436
            ||||||||| || |||||||||||| ||||||| || |||||||| | ||||||||  | 
Sbjct: 3807 agcaagttcagcagtgaggatgaaggttgacatgccagcttccctgatgtgacgaatgtt 3748

                                                                        
Query: 437  gccgttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactg 496
             || |||||||||||||  |||||||||||||| || |||| ||| ||||||||||||||
Sbjct: 3747 accattcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgactg 3688

                                                                        
Query: 497  ctccgtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccg 556
            |||  | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |
Sbjct: 3687 ctctttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttg 3628

                        
Query: 557  gtgcttgatcct 568
            ||||||||||||
Sbjct: 3627 gtgcttgatcct 3616
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>gb|AY466071.1| Sorghum bicolor voucher NSL83707 phytochrome A (PHYA) gene, complete
            cds
          Length = 3834

 Score =  119 bits (60), Expect = 1e-23
 Identities = 159/192 (82%)
 Strand = Plus / Minus

                                                                        
Query: 377  agcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacatc 436
            ||||||||| || |||||||||||| ||||||| || |||||||| ||||||||||  | 
Sbjct: 3807 agcaagttcagcagtgaggatgaaggttgacatgccagcttccctgaggtgacgaatgtt 3748

                                                                        
Query: 437  gccgttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactg 496
             || |||||||||||||  |||||||||||||| || |||| ||| |||||||||||| |
Sbjct: 3747 accattcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgacgg 3688

                                                                        
Query: 497  ctccgtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccg 556
            |||  | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |
Sbjct: 3687 ctctttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttg 3628

                        
Query: 557  gtgcttgatcct 568
            ||||||||||||
Sbjct: 3627 gtgcttgatcct 3616
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>gb|AY466070.1| Sorghum bicolor voucher PI152593 phytochrome A (PHYA) gene, complete
            cds
          Length = 3834

 Score =  119 bits (60), Expect = 1e-23
 Identities = 159/192 (82%)
 Strand = Plus / Minus

                                                                        
Query: 377  agcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacatc 436
            ||||||||| || |||||||||||| ||||||| || |||||||| ||||||||||  | 
Sbjct: 3807 agcaagttcagcagtgaggatgaaggttgacatgccagcttccctgaggtgacgaatgtt 3748

                                                                        
Query: 437  gccgttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactg 496
             || |||||||||||||  |||||||||||||| || |||| ||| |||||||||||| |
Sbjct: 3747 accattcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgacgg 3688

                                                                        
Query: 497  ctccgtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccg 556
            |||  | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |
Sbjct: 3687 ctctttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttg 3628

                        
Query: 557  gtgcttgatcct 568
            ||||||||||||
Sbjct: 3627 gtgcttgatcct 3616
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>gb|AY466069.1| Sorghum bicolor voucher PI229835 phytochrome A (PHYA) gene, complete
            cds
          Length = 3834

 Score =  119 bits (60), Expect = 1e-23
 Identities = 159/192 (82%)
 Strand = Plus / Minus

                                                                        
Query: 377  agcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacatc 436
            ||||||||| || |||||||||||| ||||||| || |||||||| ||||||||||  | 
Sbjct: 3807 agcaagttcagcagtgaggatgaaggttgacatgccagcttccctgaggtgacgaatgtt 3748

                                                                        
Query: 437  gccgttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactg 496
             || |||||||||||||  |||||||||||||| || |||| ||| |||||||||||| |
Sbjct: 3747 accattcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgacgg 3688

                                                                        
Query: 497  ctccgtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccg 556
            |||  | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |
Sbjct: 3687 ctctttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttg 3628

                        
Query: 557  gtgcttgatcct 568
            ||||||||||||
Sbjct: 3627 gtgcttgatcct 3616
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>gb|U56729.1|SBU56729 Sorghum bicolor phytochrome A (PHYA) mRNA, complete cds
          Length = 3805

 Score =  115 bits (58), Expect = 2e-22
 Identities = 163/198 (82%)
 Strand = Plus / Minus

                                                                        
Query: 377  agcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacatc 436
            ||||||||| || |||||||||||| ||||||| || |||||||| | ||| ||||  | 
Sbjct: 3606 agcaagttcagcagtgaggatgaaggttgacatgccagcttccctgatgtggcgaatgtt 3547

                                                                        
Query: 437  gccgttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactg 496
             || |||||||||||||  |||||||||||||| || |||| ||| |||||||||||| |
Sbjct: 3546 accattcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgacgg 3487

                                                                        
Query: 497  ctccgtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccg 556
            |||  | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |
Sbjct: 3486 ctctttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttg 3427

                              
Query: 557  gtgcttgatcctaagttc 574
            ||||||||||||||||||
Sbjct: 3426 gtgcttgatcctaagttc 3409
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>gb|AF377946.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone
              OSJNBa0031O09, complete sequence
          Length = 161339

 Score =  105 bits (53), Expect = 2e-19
 Identities = 164/201 (81%)
 Strand = Plus / Plus

                                                                          
Query: 368    tggagcacaagcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtg 427
              ||||||| ||||||||||| || ||||||||||| ||||||| || |||||||| |  ||
Sbjct: 140937 tggagcagaagcaagttcgacgctgaggatgaaggttgacatgccagcttccctcatatg 140996

                                                                          
Query: 428    acgaacatcgccgttcatgagcctcaacaggtttctagaaactaggaggcccaagccctc 487
               || |||||||| ||||||||||||| |||||||||||||||    || | || ||| ||
Sbjct: 140997 tcggacatcgccattcatgagcctcagcaggtttctagaaaccgcaagactcatgccttc 141056

                                                                          
Query: 488    ctctgactgctccgtgttctcctcctcaaacatttgcgccatcagctctgctgggactcc 547
               || ||||||||| | || || |||||  ||||||| | || ||| ||||||||||||||
Sbjct: 141057 atccgactgctccttattgtcatcctcgtacatttgtgacagcagatctgctgggactcc 141116

                                   
Query: 548    taatccccggtgcttgatcct 568
              |   ||| |||||||||||||
Sbjct: 141117 tttgccctggtgcttgatcct 141137
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>gb|AC147426.2| Oryza sativa chromosome 3  B1377B10 genomic sequence, complete sequence
          Length = 184366

 Score =  105 bits (53), Expect = 2e-19
 Identities = 164/201 (81%)
 Strand = Plus / Plus

                                                                         
Query: 368   tggagcacaagcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtg 427
             ||||||| ||||||||||| || ||||||||||| ||||||| || |||||||| |  ||
Sbjct: 58920 tggagcagaagcaagttcgacgctgaggatgaaggttgacatgccagcttccctcatatg 58979

                                                                         
Query: 428   acgaacatcgccgttcatgagcctcaacaggtttctagaaactaggaggcccaagccctc 487
              || |||||||| ||||||||||||| |||||||||||||||    || | || ||| ||
Sbjct: 58980 tcggacatcgccattcatgagcctcagcaggtttctagaaaccgcaagactcatgccttc 59039

                                                                         
Query: 488   ctctgactgctccgtgttctcctcctcaaacatttgcgccatcagctctgctgggactcc 547
              || ||||||||| | || || |||||  ||||||| | || ||| ||||||||||||||
Sbjct: 59040 atccgactgctccttattgtcatcctcgtacatttgtgacagcagatctgctgggactcc 59099

                                  
Query: 548   taatccccggtgcttgatcct 568
             |   ||| |||||||||||||
Sbjct: 59100 tttgccctggtgcttgatcct 59120
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  105 bits (53), Expect = 2e-19
 Identities = 164/201 (81%)
 Strand = Plus / Plus

                                                                            
Query: 368      tggagcacaagcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtg 427
                ||||||| ||||||||||| || ||||||||||| ||||||| || |||||||| |  ||
Sbjct: 28875625 tggagcagaagcaagttcgacgctgaggatgaaggttgacatgccagcttccctcatatg 28875684

                                                                            
Query: 428      acgaacatcgccgttcatgagcctcaacaggtttctagaaactaggaggcccaagccctc 487
                 || |||||||| ||||||||||||| |||||||||||||||    || | || ||| ||
Sbjct: 28875685 tcggacatcgccattcatgagcctcagcaggtttctagaaaccgcaagactcatgccttc 28875744

                                                                            
Query: 488      ctctgactgctccgtgttctcctcctcaaacatttgcgccatcagctctgctgggactcc 547
                 || ||||||||| | || || |||||  ||||||| | || ||| ||||||||||||||
Sbjct: 28875745 atccgactgctccttattgtcatcctcgtacatttgtgacagcagatctgctgggactcc 28875804

                                     
Query: 548      taatccccggtgcttgatcct 568
                |   ||| |||||||||||||
Sbjct: 28875805 tttgccctggtgcttgatcct 28875825
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  105 bits (53), Expect = 2e-19
 Identities = 164/201 (81%)
 Strand = Plus / Plus

                                                                            
Query: 368      tggagcacaagcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtg 427
                ||||||| ||||||||||| || ||||||||||| ||||||| || |||||||| |  ||
Sbjct: 28967047 tggagcagaagcaagttcgacgctgaggatgaaggttgacatgccagcttccctcatatg 28967106

                                                                            
Query: 428      acgaacatcgccgttcatgagcctcaacaggtttctagaaactaggaggcccaagccctc 487
                 || |||||||| ||||||||||||| |||||||||||||||    || | || ||| ||
Sbjct: 28967107 tcggacatcgccattcatgagcctcagcaggtttctagaaaccgcaagactcatgccttc 28967166

                                                                            
Query: 488      ctctgactgctccgtgttctcctcctcaaacatttgcgccatcagctctgctgggactcc 547
                 || ||||||||| | || || |||||  ||||||| | || ||| ||||||||||||||
Sbjct: 28967167 atccgactgctccttattgtcatcctcgtacatttgtgacagcagatctgctgggactcc 28967226

                                     
Query: 548      taatccccggtgcttgatcct 568
                |   ||| |||||||||||||
Sbjct: 28967227 tttgccctggtgcttgatcct 28967247
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>emb|X14172.1|OSPHY18 Rice phy 18 gene for phytochrome
          Length = 9979

 Score =  105 bits (53), Expect = 2e-19
 Identities = 164/201 (81%)
 Strand = Plus / Minus

                                                                        
Query: 368  tggagcacaagcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtg 427
            ||||||| ||||||||||| || ||||||||||| ||||||| || |||||||| |  ||
Sbjct: 8608 tggagcagaagcaagttcgacgctgaggatgaaggttgacatgccagcttccctcatatg 8549

                                                                        
Query: 428  acgaacatcgccgttcatgagcctcaacaggtttctagaaactaggaggcccaagccctc 487
             || |||||||| ||||||||||||| |||||||||||||||    || | || ||| ||
Sbjct: 8548 tcggacatcgccattcatgagcctcagcaggtttctagaaaccgcaagactcatgccttc 8489

                                                                        
Query: 488  ctctgactgctccgtgttctcctcctcaaacatttgcgccatcagctctgctgggactcc 547
             || ||||||||| | || || |||||  ||||||| | || ||| ||||||||||||||
Sbjct: 8488 atccgactgctccttattgtcatcctcgtacatttgtgacagcagatctgctgggactcc 8429

                                 
Query: 548  taatccccggtgcttgatcct 568
            |   ||| |||||||||||||
Sbjct: 8428 tttgccctggtgcttgatcct 8408
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>gb|AY466068.1| Sorghum bicolor voucher PI153800 phytochrome A (PHYA) gene, complete
            cds
          Length = 3834

 Score =  103 bits (52), Expect = 7e-19
 Identities = 157/192 (81%)
 Strand = Plus / Minus

                                                                        
Query: 377  agcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacatc 436
            ||||||||| || |||||||||||| ||||||| || |||||||| | ||| ||||  | 
Sbjct: 3807 agcaagttcagcagtgaggatgaaggttgacatgccagcttccctgatgtggcgaatgtt 3748

                                                                        
Query: 437  gccgttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactg 496
             || |||||||||||||  |||||||||||||| || |||| ||| |||||||||||| |
Sbjct: 3747 accattcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgacgg 3688

                                                                        
Query: 497  ctccgtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccg 556
            |||  | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |
Sbjct: 3687 ctctttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttg 3628

                        
Query: 557  gtgcttgatcct 568
            ||||||||||||
Sbjct: 3627 gtgcttgatcct 3616
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>gb|AY466067.1| Sorghum bicolor voucher PI267380 phytochrome A (PHYA) gene, complete
            cds
          Length = 3834

 Score =  103 bits (52), Expect = 7e-19
 Identities = 157/192 (81%)
 Strand = Plus / Minus

                                                                        
Query: 377  agcaagttcggcggtgaggatgaagattgacataccggcttcccttaggtgacgaacatc 436
            ||||||||| || |||||||||||| ||||||| || |||||||| | ||| ||||  | 
Sbjct: 3807 agcaagttcagcagtgaggatgaaggttgacatgccagcttccctgatgtggcgaatgtt 3748

                                                                        
Query: 437  gccgttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactg 496
             || |||||||||||||  |||||||||||||| || |||| ||| |||||||||||| |
Sbjct: 3747 accattcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgacgg 3688

                                                                        
Query: 497  ctccgtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccg 556
            |||  | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |
Sbjct: 3687 ctctttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttg 3628

                        
Query: 557  gtgcttgatcct 568
            ||||||||||||
Sbjct: 3627 gtgcttgatcct 3616
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>gb|AY761820.1| Sorghum bicolor clone Rtx430 phytochrome A gene, partial sequence
          Length = 1442

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 107/128 (83%)
 Strand = Plus / Minus

                                                                        
Query: 441  ttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactgctcc 500
            |||||||||||||  |||||||||||||| || |||| ||| ||||||||||||||||| 
Sbjct: 1435 ttcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgactgctct 1376

                                                                        
Query: 501  gtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccggtgc 560
             | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |||||
Sbjct: 1375 ttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttggtgc 1316

                    
Query: 561  ttgatcct 568
            ||||||||
Sbjct: 1315 ttgatcct 1308
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>gb|AY761819.1| Sorghum arundinaceum clone LWA88 phytochrome A gene, partial sequence
          Length = 1442

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 107/128 (83%)
 Strand = Plus / Minus

                                                                        
Query: 441  ttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactgctcc 500
            |||||||||||||  |||||||||||||| || |||| ||| ||||||||||||||||| 
Sbjct: 1435 ttcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgactgctct 1376

                                                                        
Query: 501  gtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccggtgc 560
             | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |||||
Sbjct: 1375 ttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttggtgc 1316

                    
Query: 561  ttgatcct 568
            ||||||||
Sbjct: 1315 ttgatcct 1308
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>gb|AY761818.1| Sorghum x drummondii clone LWA71 phytochrome A gene, partial sequence
          Length = 1442

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 107/128 (83%)
 Strand = Plus / Minus

                                                                        
Query: 441  ttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactgctcc 500
            |||||||||||||  |||||||||||||| || |||| ||| ||||||||||||||||| 
Sbjct: 1435 ttcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgactgctct 1376

                                                                        
Query: 501  gtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccggtgc 560
             | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |||||
Sbjct: 1375 ttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttggtgc 1316

                    
Query: 561  ttgatcct 568
            ||||||||
Sbjct: 1315 ttgatcct 1308
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>gb|AY761817.1| Sorghum arundinaceum clone LWA55 phytochrome A gene, partial sequence
          Length = 1442

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 107/128 (83%)
 Strand = Plus / Minus

                                                                        
Query: 441  ttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactgctcc 500
            |||||||||||||  |||||||||||||| || |||| ||| ||||||||||||||||| 
Sbjct: 1435 ttcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgactgctct 1376

                                                                        
Query: 501  gtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccggtgc 560
             | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |||||
Sbjct: 1375 ttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttggtgc 1316

                    
Query: 561  ttgatcct 568
            ||||||||
Sbjct: 1315 ttgatcct 1308
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>gb|AY761816.1| Sorghum arundinaceum clone LWA42 phytochrome A gene, partial sequence
          Length = 1442

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 107/128 (83%)
 Strand = Plus / Minus

                                                                        
Query: 441  ttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactgctcc 500
            |||||||||||||  |||||||||||||| || |||| ||| ||||||||||||||||| 
Sbjct: 1435 ttcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgactgctct 1376

                                                                        
Query: 501  gtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccggtgc 560
             | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |||||
Sbjct: 1375 ttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttggtgc 1316

                    
Query: 561  ttgatcct 568
            ||||||||
Sbjct: 1315 ttgatcct 1308
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>gb|AY761814.1| Sorghum arundinaceum clone LWA22 phytochrome A gene, partial sequence
          Length = 1442

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 107/128 (83%)
 Strand = Plus / Minus

                                                                        
Query: 441  ttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactgctcc 500
            |||||||||||||  |||||||||||||| || |||| ||| ||||||||||||||||| 
Sbjct: 1435 ttcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgactgctct 1376

                                                                        
Query: 501  gtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccggtgc 560
             | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |||||
Sbjct: 1375 ttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttggtgc 1316

                    
Query: 561  ttgatcct 568
            ||||||||
Sbjct: 1315 ttgatcct 1308
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>gb|AY761813.1| Sorghum arundinaceum clone LWA13 phytochrome A gene, partial sequence
          Length = 1442

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 107/128 (83%)
 Strand = Plus / Minus

                                                                        
Query: 441  ttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactgctcc 500
            |||||||||||||  |||||||||||||| || |||| ||| ||||||||||||||||| 
Sbjct: 1435 ttcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgactgctct 1376

                                                                        
Query: 501  gtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccggtgc 560
             | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |||||
Sbjct: 1375 ttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttggtgc 1316

                    
Query: 561  ttgatcct 568
            ||||||||
Sbjct: 1315 ttgatcct 1308
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>gb|AY761811.1| Sorghum x drummondii clone LWA12a phytochrome A gene, partial
            sequence
          Length = 1442

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 107/128 (83%)
 Strand = Plus / Minus

                                                                        
Query: 441  ttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactgctcc 500
            |||||||||||||  |||||||||||||| || |||| ||| ||||||||||||||||| 
Sbjct: 1435 ttcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgactgctct 1376

                                                                        
Query: 501  gtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccggtgc 560
             | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |||||
Sbjct: 1375 ttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttggtgc 1316

                    
Query: 561  ttgatcct 568
            ||||||||
Sbjct: 1315 ttgatcct 1308
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>gb|AY761810.1| Sorghum bicolor clone BTx623 phytochrome A gene, partial sequence
          Length = 1442

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 107/128 (83%)
 Strand = Plus / Minus

                                                                        
Query: 441  ttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactgctcc 500
            |||||||||||||  |||||||||||||| || |||| ||| ||||||||||||||||| 
Sbjct: 1435 ttcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgactgctct 1376

                                                                        
Query: 501  gtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccggtgc 560
             | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |||||
Sbjct: 1375 ttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttggtgc 1316

                    
Query: 561  ttgatcct 568
            ||||||||
Sbjct: 1315 ttgatcct 1308
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>gb|AY761809.1| Sorghum bicolor clone 87088 phytochrome A gene, partial sequence
          Length = 1442

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 107/128 (83%)
 Strand = Plus / Minus

                                                                        
Query: 441  ttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactgctcc 500
            |||||||||||||  |||||||||||||| || |||| ||| ||||||||||||||||| 
Sbjct: 1435 ttcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgactgctct 1376

                                                                        
Query: 501  gtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccggtgc 560
             | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |||||
Sbjct: 1375 ttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttggtgc 1316

                    
Query: 561  ttgatcct 568
            ||||||||
Sbjct: 1315 ttgatcct 1308
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>gb|AY761806.1| Sorghum bicolor clone 77034a phytochrome A gene, partial sequence
          Length = 1442

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 107/128 (83%)
 Strand = Plus / Minus

                                                                        
Query: 441  ttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactgctcc 500
            |||||||||||||  |||||||||||||| || |||| ||| ||||||||||||||||| 
Sbjct: 1435 ttcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgactgctct 1376

                                                                        
Query: 501  gtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccggtgc 560
             | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |||||
Sbjct: 1375 ttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttggtgc 1316

                    
Query: 561  ttgatcct 568
            ||||||||
Sbjct: 1315 ttgatcct 1308
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>gb|AY761805.1| Sorghum bicolor clone 55751b phytochrome A gene, partial sequence
          Length = 1442

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 107/128 (83%)
 Strand = Plus / Minus

                                                                        
Query: 441  ttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactgctcc 500
            |||||||||||||  |||||||||||||| || |||| ||| ||||||||||||||||| 
Sbjct: 1435 ttcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgactgctct 1376

                                                                        
Query: 501  gtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccggtgc 560
             | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |||||
Sbjct: 1375 ttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttggtgc 1316

                    
Query: 561  ttgatcct 568
            ||||||||
Sbjct: 1315 ttgatcct 1308
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>gb|AY761804.1| Sorghum bicolor clone 55751a phytochrome A gene, partial sequence
          Length = 1442

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 107/128 (83%)
 Strand = Plus / Minus

                                                                        
Query: 441  ttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactgctcc 500
            |||||||||||||  |||||||||||||| || |||| ||| ||||||||||||||||| 
Sbjct: 1435 ttcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgactgctct 1376

                                                                        
Query: 501  gtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccggtgc 560
             | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |||||
Sbjct: 1375 ttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttggtgc 1316

                    
Query: 561  ttgatcct 568
            ||||||||
Sbjct: 1315 ttgatcct 1308
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>gb|AY761801.1| Sorghum bicolor clone 51397a phytochrome A gene, partial sequence
          Length = 1442

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 107/128 (83%)
 Strand = Plus / Minus

                                                                        
Query: 441  ttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactgctcc 500
            |||||||||||||  |||||||||||||| || |||| ||| ||||||||||||||||| 
Sbjct: 1435 ttcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgactgctct 1376

                                                                        
Query: 501  gtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccggtgc 560
             | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |||||
Sbjct: 1375 ttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttggtgc 1316

                    
Query: 561  ttgatcct 568
            ||||||||
Sbjct: 1315 ttgatcct 1308
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>gb|AY761799.1| Sorghum bicolor clone 51365a phytochrome A gene, partial sequence
          Length = 1442

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 107/128 (83%)
 Strand = Plus / Minus

                                                                        
Query: 441  ttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactgctcc 500
            |||||||||||||  |||||||||||||| || |||| ||| ||||||||||||||||| 
Sbjct: 1435 ttcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgactgctct 1376

                                                                        
Query: 501  gtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccggtgc 560
             | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |||||
Sbjct: 1375 ttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttggtgc 1316

                    
Query: 561  ttgatcct 568
            ||||||||
Sbjct: 1315 ttgatcct 1308
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>gb|AY761797.1| Sorghum bicolor clone 510906b phytochrome A gene, partial sequence
          Length = 1442

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 107/128 (83%)
 Strand = Plus / Minus

                                                                        
Query: 441  ttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactgctcc 500
            |||||||||||||  |||||||||||||| || |||| ||| ||||||||||||||||| 
Sbjct: 1435 ttcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgactgctct 1376

                                                                        
Query: 501  gtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccggtgc 560
             | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |||||
Sbjct: 1375 ttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttggtgc 1316

                    
Query: 561  ttgatcct 568
            ||||||||
Sbjct: 1315 ttgatcct 1308
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>gb|AY761795.1| Sorghum bicolor clone 51032 phytochrome A gene, partial sequence
          Length = 1442

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 107/128 (83%)
 Strand = Plus / Minus

                                                                        
Query: 441  ttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactgctcc 500
            |||||||||||||  |||||||||||||| || |||| ||| ||||||||||||||||| 
Sbjct: 1435 ttcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgactgctct 1376

                                                                        
Query: 501  gtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccggtgc 560
             | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |||||
Sbjct: 1375 ttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttggtgc 1316

                    
Query: 561  ttgatcct 568
            ||||||||
Sbjct: 1315 ttgatcct 1308
to top
>gb|AY761794.1| Sorghum bicolor clone 50875 phytochrome A gene, partial sequence
          Length = 1442

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 107/128 (83%)
 Strand = Plus / Minus

                                                                        
Query: 441  ttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactgctcc 500
            |||||||||||||  |||||||||||||| || |||| ||| ||||||||||||||||| 
Sbjct: 1435 ttcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgactgctct 1376

                                                                        
Query: 501  gtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccggtgc 560
             | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |||||
Sbjct: 1375 ttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttggtgc 1316

                    
Query: 561  ttgatcct 568
            ||||||||
Sbjct: 1315 ttgatcct 1308
to top
>gb|AY761793.1| Sorghum bicolor clone 50744 phytochrome A gene, partial sequence
          Length = 1442

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 107/128 (83%)
 Strand = Plus / Minus

                                                                        
Query: 441  ttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactgctcc 500
            |||||||||||||  |||||||||||||| || |||| ||| ||||||||||||||||| 
Sbjct: 1435 ttcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgactgctct 1376

                                                                        
Query: 501  gtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccggtgc 560
             | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |||||
Sbjct: 1375 ttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttggtgc 1316

                    
Query: 561  ttgatcct 568
            ||||||||
Sbjct: 1315 ttgatcct 1308
to top
>gb|AY761792.1| Sorghum bicolor clone 287624b phytochrome A gene, partial sequence
          Length = 1442

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 107/128 (83%)
 Strand = Plus / Minus

                                                                        
Query: 441  ttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactgctcc 500
            |||||||||||||  |||||||||||||| || |||| ||| ||||||||||||||||| 
Sbjct: 1435 ttcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgactgctct 1376

                                                                        
Query: 501  gtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccggtgc 560
             | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |||||
Sbjct: 1375 ttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttggtgc 1316

                    
Query: 561  ttgatcct 568
            ||||||||
Sbjct: 1315 ttgatcct 1308
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>gb|AY761790.1| Sorghum bicolor clone 267525 phytochrome A gene, partial sequence
          Length = 1442

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 107/128 (83%)
 Strand = Plus / Minus

                                                                        
Query: 441  ttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactgctcc 500
            |||||||||||||  |||||||||||||| || |||| ||| ||||||||||||||||| 
Sbjct: 1435 ttcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgactgctct 1376

                                                                        
Query: 501  gtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccggtgc 560
             | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |||||
Sbjct: 1375 ttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttggtgc 1316

                    
Query: 561  ttgatcct 568
            ||||||||
Sbjct: 1315 ttgatcct 1308
to top
>gb|AY761789.1| Sorghum bicolor clone 267523 phytochrome A gene, partial sequence
          Length = 1442

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 107/128 (83%)
 Strand = Plus / Minus

                                                                        
Query: 441  ttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactgctcc 500
            |||||||||||||  |||||||||||||| || |||| ||| ||||||||||||||||| 
Sbjct: 1435 ttcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgactgctct 1376

                                                                        
Query: 501  gtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccggtgc 560
             | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |||||
Sbjct: 1375 ttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttggtgc 1316

                    
Query: 561  ttgatcct 568
            ||||||||
Sbjct: 1315 ttgatcct 1308
to top
>gb|AY761787.1| Sorghum bicolor clone 221655 phytochrome A gene, partial sequence
          Length = 1442

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 107/128 (83%)
 Strand = Plus / Minus

                                                                        
Query: 441  ttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactgctcc 500
            |||||||||||||  |||||||||||||| || |||| ||| ||||||||||||||||| 
Sbjct: 1435 ttcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgactgctct 1376

                                                                        
Query: 501  gtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccggtgc 560
             | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |||||
Sbjct: 1375 ttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttggtgc 1316

                    
Query: 561  ttgatcct 568
            ||||||||
Sbjct: 1315 ttgatcct 1308
to top
>gb|AY761785.1| Sorghum bicolor clone 221607a phytochrome A gene, partial sequence
          Length = 1442

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 107/128 (83%)
 Strand = Plus / Minus

                                                                        
Query: 441  ttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactgctcc 500
            |||||||||||||  |||||||||||||| || |||| ||| ||||||||||||||||| 
Sbjct: 1435 ttcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgactgctct 1376

                                                                        
Query: 501  gtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccggtgc 560
             | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |||||
Sbjct: 1375 ttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttggtgc 1316

                    
Query: 561  ttgatcct 568
            ||||||||
Sbjct: 1315 ttgatcct 1308
to top
>gb|AY761784.1| Sorghum bicolor clone 221540 phytochrome A gene, partial sequence
          Length = 1442

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 107/128 (83%)
 Strand = Plus / Minus

                                                                        
Query: 441  ttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactgctcc 500
            |||||||||||||  |||||||||||||| || |||| ||| ||||||||||||||||| 
Sbjct: 1435 ttcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgactgctct 1376

                                                                        
Query: 501  gtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccggtgc 560
             | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |||||
Sbjct: 1375 ttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttggtgc 1316

                    
Query: 561  ttgatcct 568
            ||||||||
Sbjct: 1315 ttgatcct 1308
to top
>gb|AY761783.1| Sorghum bicolor clone 22913 phytochrome A gene, partial sequence
          Length = 1442

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 107/128 (83%)
 Strand = Plus / Minus

                                                                        
Query: 441  ttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactgctcc 500
            |||||||||||||  |||||||||||||| || |||| ||| ||||||||||||||||| 
Sbjct: 1435 ttcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgactgctct 1376

                                                                        
Query: 501  gtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccggtgc 560
             | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |||||
Sbjct: 1375 ttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttggtgc 1316

                    
Query: 561  ttgatcct 568
            ||||||||
Sbjct: 1315 ttgatcct 1308
to top
>gb|AY761782.1| Sorghum bicolor clone 213900 phytochrome A gene, partial sequence
          Length = 1442

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 107/128 (83%)
 Strand = Plus / Minus

                                                                        
Query: 441  ttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactgctcc 500
            |||||||||||||  |||||||||||||| || |||| ||| ||||||||||||||||| 
Sbjct: 1435 ttcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgactgctct 1376

                                                                        
Query: 501  gtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccggtgc 560
             | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |||||
Sbjct: 1375 ttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttggtgc 1316

                    
Query: 561  ttgatcct 568
            ||||||||
Sbjct: 1315 ttgatcct 1308
to top
>gb|AY761781.1| Sorghum bicolor clone 152702 phytochrome A gene, partial sequence
          Length = 1442

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 107/128 (83%)
 Strand = Plus / Minus

                                                                        
Query: 441  ttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactgctcc 500
            |||||||||||||  |||||||||||||| || |||| ||| ||||||||||||||||| 
Sbjct: 1435 ttcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgactgctct 1376

                                                                        
Query: 501  gtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccggtgc 560
             | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |||||
Sbjct: 1375 ttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttggtgc 1316

                    
Query: 561  ttgatcct 568
            ||||||||
Sbjct: 1315 ttgatcct 1308
to top
>gb|AY761815.1| Sorghum arundinaceum clone LWA28 phytochrome A gene, partial sequence
          Length = 1442

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 106/128 (82%)
 Strand = Plus / Minus

                                                                        
Query: 441  ttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactgctcc 500
            ||||||||||| |  |||||||||||||| || |||| ||| ||||||||||||||||| 
Sbjct: 1435 ttcatgagcctaagaaggtttctagaaacaagaaggctcaaaccctcctctgactgctct 1376

                                                                        
Query: 501  gtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccggtgc 560
             | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |||||
Sbjct: 1375 ttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttggtgc 1316

                    
Query: 561  ttgatcct 568
            ||||||||
Sbjct: 1315 ttgatcct 1308
to top
>gb|AY761812.1| Sorghum x drummondii clone LWA12b phytochrome A gene, partial
            sequence
          Length = 1442

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 106/128 (82%)
 Strand = Plus / Minus

                                                                        
Query: 441  ttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactgctcc 500
            |||||||||||||  |||||||||||||| || |||| ||| |||||||||||| |||| 
Sbjct: 1435 ttcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgacggctct 1376

                                                                        
Query: 501  gtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccggtgc 560
             | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |||||
Sbjct: 1375 ttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttggtgc 1316

                    
Query: 561  ttgatcct 568
            ||||||||
Sbjct: 1315 ttgatcct 1308
to top
>gb|AY761808.1| Sorghum bicolor clone 83707 phytochrome A gene, partial sequence
          Length = 1442

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 106/128 (82%)
 Strand = Plus / Minus

                                                                        
Query: 441  ttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactgctcc 500
            |||||||||||||  |||||||||||||| || |||| ||| |||||||||||| |||| 
Sbjct: 1435 ttcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgacggctct 1376

                                                                        
Query: 501  gtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccggtgc 560
             | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |||||
Sbjct: 1375 ttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttggtgc 1316

                    
Query: 561  ttgatcct 568
            ||||||||
Sbjct: 1315 ttgatcct 1308
to top
>gb|AY761807.1| Sorghum bicolor clone 77034b phytochrome A gene, partial sequence
          Length = 1442

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 106/128 (82%)
 Strand = Plus / Minus

                                                                        
Query: 441  ttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactgctcc 500
            |||||||||||||  |||||||||||||| || |||| ||| |||||||||||| |||| 
Sbjct: 1435 ttcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgacggctct 1376

                                                                        
Query: 501  gtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccggtgc 560
             | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |||||
Sbjct: 1375 ttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttggtgc 1316

                    
Query: 561  ttgatcct 568
            ||||||||
Sbjct: 1315 ttgatcct 1308
to top
>gb|AY761803.1| Sorghum bicolor clone 51836 phytochrome A gene, partial sequence
          Length = 1442

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 106/128 (82%)
 Strand = Plus / Minus

                                                                        
Query: 441  ttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactgctcc 500
            |||||||||||||  |||||||||||||| || |||| ||| |||||||||||| |||| 
Sbjct: 1435 ttcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgacggctct 1376

                                                                        
Query: 501  gtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccggtgc 560
             | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |||||
Sbjct: 1375 ttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttggtgc 1316

                    
Query: 561  ttgatcct 568
            ||||||||
Sbjct: 1315 ttgatcct 1308
to top
>gb|AY761802.1| Sorghum bicolor clone 51397b phytochrome A gene, partial sequence
          Length = 1442

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 106/128 (82%)
 Strand = Plus / Minus

                                                                        
Query: 441  ttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactgctcc 500
            |||||||||||||  |||||||||||||| || |||| ||| |||||||||||| |||| 
Sbjct: 1435 ttcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgacggctct 1376

                                                                        
Query: 501  gtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccggtgc 560
             | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |||||
Sbjct: 1375 ttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttggtgc 1316

                    
Query: 561  ttgatcct 568
            ||||||||
Sbjct: 1315 ttgatcct 1308
to top
>gb|AY761800.1| Sorghum bicolor clone 51365b phytochrome A gene, partial sequence
          Length = 1442

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 106/128 (82%)
 Strand = Plus / Minus

                                                                        
Query: 441  ttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactgctcc 500
            |||||||||||||  |||||||||||||| || |||| ||| |||||||||||| |||| 
Sbjct: 1435 ttcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgacggctct 1376

                                                                        
Query: 501  gtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccggtgc 560
             | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |||||
Sbjct: 1375 ttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttggtgc 1316

                    
Query: 561  ttgatcct 568
            ||||||||
Sbjct: 1315 ttgatcct 1308
to top
>gb|AY761798.1| Sorghum bicolor clone 510985 phytochrome A gene, partial sequence
          Length = 1442

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 106/128 (82%)
 Strand = Plus / Minus

                                                                        
Query: 441  ttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactgctcc 500
            |||||||||||||  |||||||||||||| || |||| ||| |||||||||||| |||| 
Sbjct: 1435 ttcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgacggctct 1376

                                                                        
Query: 501  gtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccggtgc 560
             | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |||||
Sbjct: 1375 ttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttggtgc 1316

                    
Query: 561  ttgatcct 568
            ||||||||
Sbjct: 1315 ttgatcct 1308
to top
>gb|AY761796.1| Sorghum bicolor clone 510906a phytochrome A gene, partial sequence
          Length = 1442

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 106/128 (82%)
 Strand = Plus / Minus

                                                                        
Query: 441  ttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactgctcc 500
            |||||||||||||  |||||||||||||| || |||| ||| |||||||||||| |||| 
Sbjct: 1435 ttcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgacggctct 1376

                                                                        
Query: 501  gtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccggtgc 560
             | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |||||
Sbjct: 1375 ttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttggtgc 1316

                    
Query: 561  ttgatcct 568
            ||||||||
Sbjct: 1315 ttgatcct 1308
to top
>gb|AY761791.1| Sorghum bicolor clone 287624a phytochrome A gene, partial sequence
          Length = 1442

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 106/128 (82%)
 Strand = Plus / Minus

                                                                        
Query: 441  ttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactgctcc 500
            |||||||||||||  |||||||||||||| || |||| ||| |||||||||||| |||| 
Sbjct: 1435 ttcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgacggctct 1376

                                                                        
Query: 501  gtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccggtgc 560
             | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |||||
Sbjct: 1375 ttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttggtgc 1316

                    
Query: 561  ttgatcct 568
            ||||||||
Sbjct: 1315 ttgatcct 1308
to top
>gb|AY761788.1| Sorghum bicolor clone 257595 phytochrome A gene, partial sequence
          Length = 1442

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 106/128 (82%)
 Strand = Plus / Minus

                                                                        
Query: 441  ttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactgctcc 500
            |||||||||||||  |||||||||||||| || |||| ||| |||||||||||| |||| 
Sbjct: 1435 ttcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgacggctct 1376

                                                                        
Query: 501  gtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccggtgc 560
             | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |||||
Sbjct: 1375 ttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttggtgc 1316

                    
Query: 561  ttgatcct 568
            ||||||||
Sbjct: 1315 ttgatcct 1308
to top
>gb|AY761786.1| Sorghum bicolor clone 221607b phytochrome A gene, partial sequence
          Length = 1442

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 106/128 (82%)
 Strand = Plus / Minus

                                                                        
Query: 441  ttcatgagcctcaacaggtttctagaaactaggaggcccaagccctcctctgactgctcc 500
            |||||||||||||  |||||||||||||| || |||| ||| |||||||||||| |||| 
Sbjct: 1435 ttcatgagcctcagaaggtttctagaaacaagaaggctcaaaccctcctctgacggctct 1376

                                                                        
Query: 501  gtgttctcctcctcaaacatttgcgccatcagctctgctgggactcctaatccccggtgc 560
             | || ||||||||| ||||||| | ||  |  |||||||||||||||  |||  |||||
Sbjct: 1375 ttattgtcctcctcatacatttgtgacaatatttctgctgggactcctgctccttggtgc 1316

                    
Query: 561  ttgatcct 568
            ||||||||
Sbjct: 1315 ttgatcct 1308
to top
>ref|XM_592363.2| PREDICTED: Bos taurus similar to epidermal growth factor receptor
            pathway substrate 8-like protein 1 isoform a (LOC514504),
            mRNA
          Length = 2549

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 339  ttgcttcttcatcactgcctca 360
            ||||||||||||||||||||||
Sbjct: 2214 ttgcttcttcatcactgcctca 2193
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>gb|AC069133.6| Homo sapiens BAC clone RP11-579E24 from 8, complete sequence
          Length = 201146

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 215    ttctgcattcacttaacactct 236
              ||||||||||||||||||||||
Sbjct: 138696 ttctgcattcacttaacactct 138717
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>gb|AC068863.6| Homo sapiens chromosome 2, clone CTD-2170C4, complete sequence
          Length = 101618

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 215   ttctgcattcacttaacactct 236
             ||||||||||||||||||||||
Sbjct: 83287 ttctgcattcacttaacactct 83266
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>gb|AC132597.3| Mus musculus BAC clone RP24-180D17 from chromosome 5, complete sequence
          Length = 162871

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 75    cttacacatacatattacata 95
             |||||||||||||||||||||
Sbjct: 88024 cttacacatacatattacata 88044
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>gb|AC148990.6| Mus musculus BAC clone RP24-466N11 from chromosome 7, complete sequence
          Length = 198504

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 557    gtgcttgatcctaagttcaa 576
              ||||||||||||||||||||
Sbjct: 107049 gtgcttgatcctaagttcaa 107030
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>gb|AC147708.7| Canis Familiaris, clone XX-25G10, complete sequence
          Length = 185084

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 208   tcttcctttctgcattcact 227
             ||||||||||||||||||||
Sbjct: 22502 tcttcctttctgcattcact 22483
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>gb|AC148324.2| Mus musculus BAC clone RP24-454N4 from chromosome 12, complete sequence
          Length = 183478

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 563    gatcctaagttcaagatcaa 582
              ||||||||||||||||||||
Sbjct: 176842 gatcctaagttcaagatcaa 176823
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>gb|CP000262.1| Streptococcus pyogenes MGAS10750, complete genome
          Length = 1937111

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 197     caacctttgcttcttccttt 216
               ||||||||||||||||||||
Sbjct: 1417000 caacctttgcttcttccttt 1417019
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>gb|AC102358.5| Mus musculus chromosome 8, clone RP23-451H9, complete sequence
          Length = 202151

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 198   aacctttgcttcttcctttc 217
             ||||||||||||||||||||
Sbjct: 76548 aacctttgcttcttcctttc 76567
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>gb|AC140055.4| Mus musculus BAC clone RP23-52F4 from chromosome 7, complete sequence
          Length = 192288

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 201   ctttgcttcttcctttctgc 220
             ||||||||||||||||||||
Sbjct: 35865 ctttgcttcttcctttctgc 35884
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>gb|AC124346.3| Mus musculus BAC clone RP24-460E12 from chromosome 12, complete
             sequence
          Length = 203150

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 563   gatcctaagttcaagatcaa 582
             ||||||||||||||||||||
Sbjct: 48337 gatcctaagttcaagatcaa 48318
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>gb|AC124731.5| Mus musculus BAC clone RP23-287B7 from 3, complete sequence
          Length = 201529

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 216    tctgcattcacttaacactc 235
              ||||||||||||||||||||
Sbjct: 103698 tctgcattcacttaacactc 103679
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>gb|AC121866.2| Mus musculus BAC clone RP24-114G1 from 8, complete sequence
          Length = 162835

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 198    aacctttgcttcttcctttc 217
              ||||||||||||||||||||
Sbjct: 122112 aacctttgcttcttcctttc 122131
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>gb|AC122730.27| Medicago truncatula clone mth2-36p5, complete sequence
          Length = 127163

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 199   acctttgcttcttcctttct 218
             ||||||||||||||||||||
Sbjct: 81280 acctttgcttcttcctttct 81261
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>gb|AY267353.1| Chara vulgaris mitochondrion, complete genome
          Length = 67737

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 200   cctttgcttcttcctttctg 219
             ||||||||||||||||||||
Sbjct: 17158 cctttgcttcttcctttctg 17177
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>emb|AL135786.17| Human DNA sequence from clone RP11-12D24 on chromosome 9p23-24.3 Contains
              the RLN1 gene for relaxin 1(H1) (RLXH1),the RLN2 gene for
              relaxin 2 (H2) (RLXH2), a  high-mobility group nucleosomal
              binding domain 2 (HMGN2) pseudogene, a  novel pseudogene,
              the gene for uncharacterized hematopoietic stem/progenitor
              cells protein (MDS030), a novel pseudogene (FLJ39176) and
              four CpG islands, complete sequence
          Length = 156592

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 76     ttacacatacatattacata 95
              ||||||||||||||||||||
Sbjct: 126048 ttacacatacatattacata 126029
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>emb|AL136117.12| Human DNA sequence from clone CTC-1333E1 on chromosome 6, complete
             sequence
          Length = 86514

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 440   gttcatgagcctcaacaggtttct 463
             ||||||||||||||| ||||||||
Sbjct: 83324 gttcatgagcctcaagaggtttct 83347
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>emb|AL132776.11|HSJ393D12 Human DNA sequence from clone RP3-393D12 on chromosome 6q16.1-16.3
             Contains the 3' end of gene KIAA0776 and the gene for a
             LIM domains containing protein (activator of CREM in
             testis), complete sequence
          Length = 92817

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 206   cttcttcctttctgcattca 225
             ||||||||||||||||||||
Sbjct: 39209 cttcttcctttctgcattca 39228
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>emb|Z47978.1|BSL22RPRT B.subtilis gene for ribosomal protein L22
          Length = 342

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 62  atcaaacttgaaccttacac 81
           ||||||||||||||||||||
Sbjct: 99  atcaaacttgaaccttacac 118
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>gb|AC147843.3| Ovis aries clone CH243-261D1, complete sequence
          Length = 151538

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 529    tcagctctgctgggactcct 548
              ||||||||||||||||||||
Sbjct: 113047 tcagctctgctgggactcct 113028
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>emb|BX323843.9| Zebrafish DNA sequence from clone CH211-10A23 in linkage group 19,
             complete sequence
          Length = 128245

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 76    ttacacatacatattacata 95
             ||||||||||||||||||||
Sbjct: 71981 ttacacatacatattacata 71962
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>gb|AC091167.19| Homo sapiens chromosome 15, clone RP11-697E2, complete sequence
          Length = 202381

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 115   cacaacaacacatcacaagt 134
             ||||||||||||||||||||
Sbjct: 32567 cacaacaacacatcacaagt 32586
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>emb|AL953844.7| Zebrafish DNA sequence from clone DKEY-29G23 in linkage group 15,
             complete sequence
          Length = 194120

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 587   gtgaagattctctccgatgc 606
             ||||||||||||||||||||
Sbjct: 55671 gtgaagattctctccgatgc 55652
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>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 613     tcgtcgcctgggctgaaatc 632
               ||||||||||||||||||||
Sbjct: 7028023 tcgtcgcctgggctgaaatc 7028042
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>gb|AC140230.3| Mus musculus BAC clone RP24-493E4 from 14, complete sequence
          Length = 154085

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 480   aagccctcctctgactgctc 499
             ||||||||||||||||||||
Sbjct: 56803 aagccctcctctgactgctc 56784


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,321,097
Number of Sequences: 3902068
Number of extensions: 5321097
Number of successful extensions: 100068
Number of sequences better than 10.0: 102
Number of HSP's better than 10.0 without gapping: 102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 99770
Number of HSP's gapped (non-prelim): 220
length of query: 633
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 610
effective length of database: 17,143,297,704
effective search space: 10457411599440
effective search space used: 10457411599440
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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