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-Barley Genetic Resources Database-
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| Clone Name | rbasd17f08 |
|---|---|
| Clone Library Name | barley_pub |
>EF1A_WHEAT (Q03033) Elongation factor 1-alpha (EF-1-alpha)| Length = 447 Score = 63.2 bits (152), Expect = 2e-10 Identities = 31/34 (91%), Positives = 33/34 (97%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXKK 43 AVRDMRQTVAVGVIKGV+KKDPTGA+VTKAA KK Sbjct: 413 AVRDMRQTVAVGVIKGVEKKDPTGAKVTKAAIKK 446
>EF1A_VICFA (O24534) Elongation factor 1-alpha (EF-1-alpha)| Length = 447 Score = 61.2 bits (147), Expect = 7e-10 Identities = 30/34 (88%), Positives = 32/34 (94%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXKK 43 AVRDMRQTVAVGVIK V+KKDPTGA+VTKAA KK Sbjct: 413 AVRDMRQTVAVGVIKSVEKKDPTGAKVTKAAAKK 446
>EF1A_PEA (Q41011) Elongation factor 1-alpha (EF-1-alpha)| Length = 447 Score = 61.2 bits (147), Expect = 7e-10 Identities = 30/34 (88%), Positives = 32/34 (94%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXKK 43 AVRDMRQTVAVGVIK V+KKDPTGA+VTKAA KK Sbjct: 413 AVRDMRQTVAVGVIKSVEKKDPTGAKVTKAAAKK 446
>EF1A_ORYSA (O64937) Elongation factor 1-alpha (EF-1-alpha)| Length = 447 Score = 61.2 bits (147), Expect = 7e-10 Identities = 30/34 (88%), Positives = 32/34 (94%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXKK 43 AVRDMRQTVAVGVIK V+KKDPTGA+VTKAA KK Sbjct: 413 AVRDMRQTVAVGVIKNVEKKDPTGAKVTKAAAKK 446
>EF1A_MAIZE (Q41803) Elongation factor 1-alpha (EF-1-alpha)| Length = 447 Score = 61.2 bits (147), Expect = 7e-10 Identities = 30/34 (88%), Positives = 32/34 (94%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXKK 43 AVRDMRQTVAVGVIK V+KKDPTGA+VTKAA KK Sbjct: 413 AVRDMRQTVAVGVIKSVEKKDPTGAKVTKAAAKK 446
>EF1A_SOYBN (P25698) Elongation factor 1-alpha (EF-1-alpha)| Length = 447 Score = 60.8 bits (146), Expect = 1e-09 Identities = 30/34 (88%), Positives = 32/34 (94%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXKK 43 AVRDMRQTVAVGVIK V+KKDPTGA+VTKAA KK Sbjct: 413 AVRDMRQTVAVGVIKNVEKKDPTGAKVTKAAQKK 446
>EF1A2_DAUCA (P34823) Elongation factor 1-alpha (EF-1-alpha)| Length = 447 Score = 60.8 bits (146), Expect = 1e-09 Identities = 30/34 (88%), Positives = 32/34 (94%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXKK 43 AVRDMRQTVAVGVIK V+KKDPTGA+VTKAA KK Sbjct: 413 AVRDMRQTVAVGVIKSVEKKDPTGAKVTKAAIKK 446
>EF1A_ARATH (P13905) Elongation factor 1-alpha (EF-1-alpha) (eEF-1A)| Length = 449 Score = 60.1 bits (144), Expect = 2e-09 Identities = 30/34 (88%), Positives = 31/34 (91%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXKK 43 AVRDMRQTVAVGVIK V KKDPTGA+VTKAA KK Sbjct: 413 AVRDMRQTVAVGVIKSVDKKDPTGAKVTKAAVKK 446
>EF1A_TOBAC (P43643) Elongation factor 1-alpha (EF-1-alpha) (Vitronectin-like| adhesion protein 1) (PVN1) Length = 447 Score = 60.1 bits (144), Expect = 2e-09 Identities = 30/34 (88%), Positives = 31/34 (91%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXKK 43 AVRDMRQTVAVGVIK V KKDPTGA+VTKAA KK Sbjct: 413 AVRDMRQTVAVGVIKNVDKKDPTGAKVTKAAQKK 446
>EF1A_LYCES (P17786) Elongation factor 1-alpha (EF-1-alpha)| Length = 448 Score = 59.7 bits (143), Expect = 2e-09 Identities = 29/34 (85%), Positives = 31/34 (91%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXKK 43 AVRDMRQTVAVGV+K V KKDPTGA+VTKAA KK Sbjct: 413 AVRDMRQTVAVGVVKNVDKKDPTGAKVTKAAQKK 446
>EF1A2_HORVU (Q40034) Elongation factor 1-alpha (EF-1-alpha)| Length = 447 Score = 59.3 bits (142), Expect = 3e-09 Identities = 29/34 (85%), Positives = 32/34 (94%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXKK 43 AVRDMRQTVAVGVIK V+KK+PTGA+VTKAA KK Sbjct: 413 AVRDMRQTVAVGVIKSVEKKEPTGAKVTKAAIKK 446
>EF1A1_HORVU (P34824) Elongation factor 1-alpha (EF-1-alpha)| Length = 447 Score = 59.3 bits (142), Expect = 3e-09 Identities = 29/34 (85%), Positives = 32/34 (94%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXKK 43 AVRDMRQTVAVGVIK V+KK+PTGA+VTKAA KK Sbjct: 413 AVRDMRQTVAVGVIKSVEKKEPTGAKVTKAAIKK 446
>EF1A_MANES (O49169) Elongation factor 1-alpha (EF-1-alpha)| Length = 449 Score = 58.5 bits (140), Expect = 5e-09 Identities = 28/34 (82%), Positives = 32/34 (94%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXKK 43 AVRDMRQTVAVGVIK V+KKDP+GA+VTK+A KK Sbjct: 413 AVRDMRQTVAVGVIKSVEKKDPSGAKVTKSAAKK 446
>EF1A1_DAUCA (P29521) Elongation factor 1-alpha (EF-1-alpha)| Length = 449 Score = 57.8 bits (138), Expect = 8e-09 Identities = 29/34 (85%), Positives = 31/34 (91%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXKK 43 AVR MRQTVAVGVIK V+KKDPTGA+VTKAA KK Sbjct: 413 AVRVMRQTVAVGVIKAVEKKDPTGAKVTKAAAKK 446
>EF1A_ARTSA (P02993) Elongation factor 1-alpha (EF-1-alpha)| Length = 461 Score = 51.2 bits (121), Expect = 8e-07 Identities = 26/33 (78%), Positives = 27/33 (81%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVGVIK V KDPT +VTKAA K Sbjct: 424 AVRDMRQTVAVGVIKSVNFKDPTAGKVTKAAEK 456
>EF1A_TRYBB (P41166) Elongation factor 1-alpha (EF-1-alpha)| Length = 449 Score = 50.8 bits (120), Expect = 1e-06 Identities = 25/33 (75%), Positives = 28/33 (84%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVG+IK V KKD +G +VTKAA K Sbjct: 413 AVRDMRQTVAVGIIKAVTKKDGSGGKVTKAAVK 445
>EF1A_COCIM (Q96WZ1) Elongation factor 1-alpha (EF-1-alpha)| Length = 460 Score = 50.8 bits (120), Expect = 1e-06 Identities = 25/33 (75%), Positives = 28/33 (84%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVGVIK V+K + TG +VTKAA K Sbjct: 424 AVRDMRQTVAVGVIKSVEKSEKTGGKVTKAAQK 456
>EF1A_YARLI (O59949) Elongation factor 1-alpha (EF-1-alpha)| Length = 460 Score = 50.4 bits (119), Expect = 1e-06 Identities = 25/33 (75%), Positives = 27/33 (81%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVGVIK V+K D G +VTKAA K Sbjct: 424 AVRDMRQTVAVGVIKSVEKSDKAGGKVTKAAQK 456
>EF1A_RHYAM (P27634) Elongation factor 1-alpha (EF-1-alpha) (Fragment)| Length = 412 Score = 49.3 bits (116), Expect = 3e-06 Identities = 26/33 (78%), Positives = 27/33 (81%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVGVIK V KD TG +VTKAA K Sbjct: 374 AVRDMRQTVAVGVIKSVVFKDATGRKVTKAAEK 406
>EF11_DROME (P08736) Elongation factor 1-alpha (EF-1-alpha) (50 kDa| female-specific protein) Length = 463 Score = 48.9 bits (115), Expect = 4e-06 Identities = 25/33 (75%), Positives = 27/33 (81%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVGVIK V KD +G +VTKAA K Sbjct: 425 AVRDMRQTVAVGVIKAVNFKDASGGKVTKAAEK 457
>EF1A_SCHCO (O42820) Elongation factor 1-alpha (EF-1-alpha)| Length = 460 Score = 48.1 bits (113), Expect = 7e-06 Identities = 23/33 (69%), Positives = 27/33 (81%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVG+IK V K D +G +VTK+A K Sbjct: 423 AVRDMRQTVAVGIIKSVDKTDKSGGKVTKSAEK 455
>EF1A_AJECA (P40911) Elongation factor 1-alpha (EF-1-alpha)| Length = 460 Score = 48.1 bits (113), Expect = 7e-06 Identities = 25/33 (75%), Positives = 26/33 (78%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVGVIK V K D T +VTKAA K Sbjct: 424 AVRDMRQTVAVGVIKSVIKSDKTAGKVTKAAQK 456
>EF1A2_SCHPO (Q10119) Elongation factor 1-alpha-B/C (EF-1-alpha-B/C)| Length = 460 Score = 48.1 bits (113), Expect = 7e-06 Identities = 25/33 (75%), Positives = 27/33 (81%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVGVIK V+K P A+VTKAA K Sbjct: 423 AVRDMRQTVAVGVIKAVEKVAPGAAKVTKAAVK 455
>EF1A1_SCHPO (P50522) Elongation factor 1-alpha-A (EF-1-alpha-A)| Length = 460 Score = 48.1 bits (113), Expect = 7e-06 Identities = 25/33 (75%), Positives = 27/33 (81%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVGVIK V+K P A+VTKAA K Sbjct: 423 AVRDMRQTVAVGVIKAVEKVAPGAAKVTKAAVK 455
>EF1A2_XENLA (P17507) Elongation factor 1-alpha, oocyte form (EF-1-alpha-O)| (EF-1AO) (42S p48) Length = 461 Score = 47.8 bits (112), Expect = 9e-06 Identities = 24/33 (72%), Positives = 27/33 (81%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVGVIKGV KK + +VTK+A K Sbjct: 425 AVRDMRQTVAVGVIKGVDKKAASSGKVTKSAVK 457
>EF1A_ARXAD (P41745) Elongation factor 1-alpha (EF-1-alpha)| Length = 459 Score = 47.4 bits (111), Expect = 1e-05 Identities = 24/33 (72%), Positives = 26/33 (78%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVGVIK V+K D +VTKAA K Sbjct: 423 AVRDMRQTVAVGVIKSVEKSDKGAGKVTKAAQK 455
>EF1A3_XENLA (P17508) Elongation factor 1-alpha, oocyte form (EF-1-alpha-O1)| (EF-1AO1) Length = 461 Score = 47.4 bits (111), Expect = 1e-05 Identities = 24/33 (72%), Positives = 27/33 (81%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVGVIKGV KK + +VTK+A K Sbjct: 425 AVRDMRQTVAVGVIKGVDKKLASSGKVTKSAAK 457
>EF1A_PUCGR (P32186) Elongation factor 1-alpha (EF-1-alpha)| Length = 463 Score = 47.0 bits (110), Expect = 1e-05 Identities = 24/33 (72%), Positives = 26/33 (78%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVGVIK V+K D +VTKAA K Sbjct: 422 AVRDMRQTVAVGVIKSVEKTDGKAGKVTKAAVK 454
>EF1A_CAEEL (P53013) Elongation factor 1-alpha (EF-1-alpha)| Length = 463 Score = 47.0 bits (110), Expect = 1e-05 Identities = 23/33 (69%), Positives = 27/33 (81%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVGVIK V+K D + +VTK+A K Sbjct: 425 AVRDMRQTVAVGVIKSVEKSDGSSGKVTKSAQK 457
>EF1A_PIRIN (Q9HDF6) Elongation factor 1-alpha (EF-1-alpha)| Length = 462 Score = 46.6 bits (109), Expect = 2e-05 Identities = 23/33 (69%), Positives = 27/33 (81%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVGVIK V+K + G +VTK+A K Sbjct: 425 AVRDMRQTVAVGVIKSVEKTEGKGGKVTKSAEK 457
>EF12_DROME (P05303) Elongation factor 1-alpha (EF-1-alpha)| Length = 462 Score = 46.6 bits (109), Expect = 2e-05 Identities = 24/33 (72%), Positives = 26/33 (78%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVGVIK V K+ T +VTKAA K Sbjct: 425 AVRDMRQTVAVGVIKSVNFKETTSGKVTKAAEK 457
>EF1A_EIMBO (Q07051) Elongation factor 1-alpha (EF-1-alpha) (Fragment)| Length = 346 Score = 46.6 bits (109), Expect = 2e-05 Identities = 24/33 (72%), Positives = 29/33 (87%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDM+QTVAVGVIKGV+KK+ G +VTK+A K Sbjct: 310 AVRDMKQTVAVGVIKGVEKKE-AGGKVTKSAQK 341
>EF1A_TRIRE (P34825) Elongation factor 1-alpha (EF-1-alpha)| Length = 460 Score = 46.6 bits (109), Expect = 2e-05 Identities = 23/33 (69%), Positives = 26/33 (78%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVGVIK V+K A+VTK+A K Sbjct: 424 AVRDMRQTVAVGVIKAVEKSSAAAAKVTKSAAK 456
>EF1A_BOMMO (P29520) Elongation factor 1-alpha (EF-1-alpha)| Length = 463 Score = 46.2 bits (108), Expect = 2e-05 Identities = 24/33 (72%), Positives = 26/33 (78%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVGVIK V K+ G +VTKAA K Sbjct: 425 AVRDMRQTVAVGVIKAVNFKEAGGGKVTKAAEK 457
>EF1A_AURPU (Q00251) Elongation factor 1-alpha (EF-1-alpha)| Length = 459 Score = 45.8 bits (107), Expect = 3e-05 Identities = 26/34 (76%), Positives = 27/34 (79%), Gaps = 1/34 (2%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGA-QVTKAAXK 46 AVRDMRQTVAVGVIK V K D GA +VTKAA K Sbjct: 422 AVRDMRQTVAVGVIKSVAKSDKQGAGKVTKAAVK 455
>EF1A_CANAL (P16017) Elongation factor 1-alpha (EF-1-alpha)| Length = 458 Score = 45.8 bits (107), Expect = 3e-05 Identities = 25/33 (75%), Positives = 27/33 (81%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVGVIK V+K D G +VTKAA K Sbjct: 423 AVRDMRQTVAVGVIKSVEKSDKAG-KVTKAAQK 454
>EF1A2_RAT (P62632) Elongation factor 1-alpha 2 (EF-1-alpha-2) (Elongation| factor 1 A-2) (eEF1A-2) (Statin S1) Length = 463 Score = 45.4 bits (106), Expect = 4e-05 Identities = 23/33 (69%), Positives = 26/33 (78%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVGVIK V+KK +VTK+A K Sbjct: 425 AVRDMRQTVAVGVIKNVEKKSGGAGKVTKSAQK 457
>EF1A2_RABIT (Q71V39) Elongation factor 1-alpha 2 (EF-1-alpha-2) (Elongation| factor 1 A-2) (eEF1A-2) (Statin S1) Length = 463 Score = 45.4 bits (106), Expect = 4e-05 Identities = 23/33 (69%), Positives = 26/33 (78%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVGVIK V+KK +VTK+A K Sbjct: 425 AVRDMRQTVAVGVIKNVEKKSGGAGKVTKSAQK 457
>EF1A2_MOUSE (P62631) Elongation factor 1-alpha 2 (EF-1-alpha-2) (Elongation| factor 1 A-2) (eEF1A-2) (Statin S1) Length = 463 Score = 45.4 bits (106), Expect = 4e-05 Identities = 23/33 (69%), Positives = 26/33 (78%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVGVIK V+KK +VTK+A K Sbjct: 425 AVRDMRQTVAVGVIKNVEKKSGGAGKVTKSAQK 457
>EF1A2_HUMAN (Q05639) Elongation factor 1-alpha 2 (EF-1-alpha-2) (Elongation| factor 1 A-2) (eEF1A-2) (Statin S1) Length = 463 Score = 45.4 bits (106), Expect = 4e-05 Identities = 23/33 (69%), Positives = 26/33 (78%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVGVIK V+KK +VTK+A K Sbjct: 425 AVRDMRQTVAVGVIKNVEKKSGGAGKVTKSAQK 457
>EF1A_ABSGL (P28295) Elongation factor 1-alpha (EF-1-alpha)| Length = 458 Score = 45.4 bits (106), Expect = 4e-05 Identities = 25/33 (75%), Positives = 27/33 (81%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVGVIK V+K D G +VTKAA K Sbjct: 423 AVRDMRQTVAVGVIKAVEKVDKAG-KVTKAAAK 454
>EF1A2_RHIRA (P14864) Elongation factor 1-alpha (EF-1-alpha)| Length = 458 Score = 45.4 bits (106), Expect = 4e-05 Identities = 25/33 (75%), Positives = 27/33 (81%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVGVIK V+K D G +VTKAA K Sbjct: 423 AVRDMRQTVAVGVIKAVEKVDKAG-KVTKAAAK 454
>EF1A1_RHIRA (P06805) Elongation factor 1-alpha (EF-1-alpha)| Length = 458 Score = 45.4 bits (106), Expect = 4e-05 Identities = 25/33 (75%), Positives = 27/33 (81%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVGVIK V+K D G +VTKAA K Sbjct: 423 AVRDMRQTVAVGVIKAVEKVDKAG-KVTKAAAK 454
>EF1C_PORPU (P50256) Elongation factor 1-alpha C (EF-1-alpha)| Length = 449 Score = 45.4 bits (106), Expect = 4e-05 Identities = 24/34 (70%), Positives = 29/34 (85%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXKK 43 AVRDMRQTVAVGVIK V+KK+ G ++TK+A KK Sbjct: 417 AVRDMRQTVAVGVIKSVEKKEVEG-KMTKSAAKK 449
>EF1A3_RHIRA (P14865) Elongation factor 1-alpha (EF-1-alpha)| Length = 457 Score = 45.4 bits (106), Expect = 4e-05 Identities = 25/33 (75%), Positives = 27/33 (81%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVGVIK V+K D G +VTKAA K Sbjct: 422 AVRDMRQTVAVGVIKAVEKVDKAG-KVTKAAAK 453
>EF1A0_XENLA (P13549) Elongation factor 1-alpha, somatic form (EF-1-alpha-S)| Length = 462 Score = 45.1 bits (105), Expect = 6e-05 Identities = 23/33 (69%), Positives = 26/33 (78%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVGVIK V+KK +VTK+A K Sbjct: 425 AVRDMRQTVAVGVIKAVEKKAAGSGKVTKSAQK 457
>EF1A_ASPOR (Q9Y713) Elongation factor 1-alpha (EF-1-alpha)| Length = 460 Score = 44.3 bits (103), Expect = 9e-05 Identities = 23/33 (69%), Positives = 25/33 (75%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVGVIK V+K +VTKAA K Sbjct: 424 AVRDMRQTVAVGVIKSVEKNTGGSGKVTKAAQK 456
>EF1A_BRARE (Q92005) Elongation factor 1-alpha (EF-1-alpha)| Length = 462 Score = 44.3 bits (103), Expect = 9e-05 Identities = 23/33 (69%), Positives = 26/33 (78%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVGVIK V+KK +VTK+A K Sbjct: 425 AVRDMRQTVAVGVIKSVEKKIGGAGKVTKSAQK 457
>EF1A1_RAT (P62630) Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation| factor 1 A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu) Length = 462 Score = 44.3 bits (103), Expect = 9e-05 Identities = 23/33 (69%), Positives = 25/33 (75%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVGVIK V KK +VTK+A K Sbjct: 425 AVRDMRQTVAVGVIKAVDKKAAGAGKVTKSAQK 457
>EF1A1_RABIT (P68105) Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation| factor 1 A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu) Length = 462 Score = 44.3 bits (103), Expect = 9e-05 Identities = 23/33 (69%), Positives = 25/33 (75%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVGVIK V KK +VTK+A K Sbjct: 425 AVRDMRQTVAVGVIKAVDKKAAGAGKVTKSAQK 457
>EF1A1_PONPY (Q5R4R8) Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation| factor 1 A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu) Length = 462 Score = 44.3 bits (103), Expect = 9e-05 Identities = 23/33 (69%), Positives = 25/33 (75%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVGVIK V KK +VTK+A K Sbjct: 425 AVRDMRQTVAVGVIKAVDKKAAGAGKVTKSAQK 457
>EF1A1_PANTR (Q5R1X2) Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation| factor 1 A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu) Length = 462 Score = 44.3 bits (103), Expect = 9e-05 Identities = 23/33 (69%), Positives = 25/33 (75%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVGVIK V KK +VTK+A K Sbjct: 425 AVRDMRQTVAVGVIKAVDKKAAGAGKVTKSAQK 457
>EF1A1_MOUSE (P10126) Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation| factor 1 A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu) Length = 462 Score = 44.3 bits (103), Expect = 9e-05 Identities = 23/33 (69%), Positives = 25/33 (75%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVGVIK V KK +VTK+A K Sbjct: 425 AVRDMRQTVAVGVIKAVDKKAAGAGKVTKSAQK 457
>EF1A1_HUMAN (P68104) Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation| factor 1 A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu) Length = 462 Score = 44.3 bits (103), Expect = 9e-05 Identities = 23/33 (69%), Positives = 25/33 (75%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVGVIK V KK +VTK+A K Sbjct: 425 AVRDMRQTVAVGVIKAVDKKAAGAGKVTKSAQK 457
>EF1A1_FELCA (Q66RN5) Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation| factor 1 A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu) Length = 462 Score = 44.3 bits (103), Expect = 9e-05 Identities = 23/33 (69%), Positives = 25/33 (75%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVGVIK V KK +VTK+A K Sbjct: 425 AVRDMRQTVAVGVIKAVDKKAAGAGKVTKSAQK 457
>EF1A1_CRIGR (P62629) Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation| factor 1 A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu) Length = 462 Score = 44.3 bits (103), Expect = 9e-05 Identities = 23/33 (69%), Positives = 25/33 (75%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVGVIK V KK +VTK+A K Sbjct: 425 AVRDMRQTVAVGVIKAVDKKAAGAGKVTKSAQK 457
>EF1A1_BOVIN (P68103) Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation| factor 1 A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu) Length = 462 Score = 44.3 bits (103), Expect = 9e-05 Identities = 23/33 (69%), Positives = 25/33 (75%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVGVIK V KK +VTK+A K Sbjct: 425 AVRDMRQTVAVGVIKAVDKKAAGAGKVTKSAQK 457
>EF1A_ASHGO (P41752) Elongation factor 1-alpha (EF-1-alpha)| Length = 458 Score = 44.3 bits (103), Expect = 9e-05 Identities = 25/33 (75%), Positives = 26/33 (78%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVGVIK V K D G +VTKAA K Sbjct: 423 AVRDMRQTVAVGVIKSVVKSDKAG-KVTKAAQK 454
>EF1A_EUGGR (P14963) Elongation factor 1-alpha (EF-1-alpha)| Length = 445 Score = 43.9 bits (102), Expect = 1e-04 Identities = 24/31 (77%), Positives = 26/31 (83%) Frame = -1 Query: 135 DMRQTVAVGVIKGVQKKDPTGAQVTKAAXKK 43 DMRQTVAVGVIK V KK+ TG +VTKAA KK Sbjct: 415 DMRQTVAVGVIKSVNKKENTG-KVTKAAQKK 444
>EF1A_STYLE (P25166) Elongation factor 1-alpha (EF-1-alpha)| Length = 446 Score = 43.9 bits (102), Expect = 1e-04 Identities = 25/34 (73%), Positives = 27/34 (79%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXKK 43 AVRDM+QTVAVGVIK V KK+ G VTKAA KK Sbjct: 413 AVRDMKQTVAVGVIKEVVKKEQKG-MVTKAAQKK 445
>EF1A_CHICK (Q90835) Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation| factor Tu) (EF-Tu) Length = 462 Score = 43.9 bits (102), Expect = 1e-04 Identities = 23/33 (69%), Positives = 25/33 (75%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVGVIK V KK +VTK+A K Sbjct: 425 AVRDMRQTVAVGVIKAVDKKAGGAGKVTKSAQK 457
>EF1A_SORMA (Q09069) Elongation factor 1-alpha (EF-1-alpha)| Length = 460 Score = 43.9 bits (102), Expect = 1e-04 Identities = 22/33 (66%), Positives = 24/33 (72%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVGVIK V K +VTK+A K Sbjct: 424 AVRDMRQTVAVGVIKAVDKTQAVAGKVTKSAAK 456
>EF1A_NEUCR (Q01372) Elongation factor 1-alpha (EF-1-alpha)| Length = 460 Score = 43.9 bits (102), Expect = 1e-04 Identities = 22/33 (66%), Positives = 24/33 (72%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVGVIK V K +VTK+A K Sbjct: 424 AVRDMRQTVAVGVIKAVDKSTAAAGKVTKSAAK 456
>EF1A_CRYNE (O42671) Elongation factor 1-alpha (EF-1-alpha)| Length = 459 Score = 43.1 bits (100), Expect = 2e-04 Identities = 24/33 (72%), Positives = 26/33 (78%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVGVIK V K + G +VTKAA K Sbjct: 423 AVRDMRQTVAVGVIKSVDKTE-KGGKVTKAAEK 454
>EF1A_APIME (P19039) Elongation factor 1-alpha (EF-1-alpha)| Length = 461 Score = 43.1 bits (100), Expect = 2e-04 Identities = 25/33 (75%), Positives = 26/33 (78%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVGVIK V KD G +VTKAA K Sbjct: 425 AVRDMRQTVAVGVIKSVTFKDTQG-KVTKAAEK 456
>EF1A_PODAN (Q01520) Elongation factor 1-alpha (EF-1-alpha)| Length = 460 Score = 42.4 bits (98), Expect = 4e-04 Identities = 22/33 (66%), Positives = 25/33 (75%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVGVIK V+K +VTK+A K Sbjct: 424 AVRDMRQTVAVGVIKKVEKAAAGSGKVTKSAAK 456
>EF1A_YEAST (P02994) Elongation factor 1-alpha (EF-1-alpha) (Translation| elongation factor 1A) (Eukaryotic elongation factor 1A) (eEF1A) Length = 458 Score = 42.4 bits (98), Expect = 4e-04 Identities = 24/33 (72%), Positives = 26/33 (78%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVGVIK V K + A+VTKAA K Sbjct: 423 AVRDMRQTVAVGVIKSVDKTE-KAAKVTKAAQK 454
>EF1A_PODCU (Q01765) Elongation factor 1-alpha (EF-1-alpha)| Length = 461 Score = 42.4 bits (98), Expect = 4e-04 Identities = 22/33 (66%), Positives = 25/33 (75%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVGVIK V+K +VTK+A K Sbjct: 424 AVRDMRQTVAVGVIKKVEKAAAGSGKVTKSAAK 456
>EF1A_HYDAT (P51554) Elongation factor 1-alpha (EF-1-alpha)| Length = 468 Score = 41.6 bits (96), Expect = 6e-04 Identities = 22/33 (66%), Positives = 24/33 (72%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVGVIK V K +VTK+A K Sbjct: 427 AVRDMRQTVAVGVIKEVDKTVAVAGKVTKSAQK 459
>EF1A_ORYLA (Q9YIC0) Elongation factor 1-alpha (EF-1-alpha)| Length = 461 Score = 41.2 bits (95), Expect = 8e-04 Identities = 23/33 (69%), Positives = 26/33 (78%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVGVIK V K+ +G + TKAA K Sbjct: 425 AVRDMRQTVAVGVIKAVDTKEISG-KTTKAAEK 456
>EF1A_ONCVO (P27592) Elongation factor 1-alpha (EF-1-alpha)| Length = 464 Score = 40.8 bits (94), Expect = 0.001 Identities = 23/33 (69%), Positives = 25/33 (75%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXK 46 AVRDMRQTVAVGVIK V K + G +V KAA K Sbjct: 425 AVRDMRQTVAVGVIKNVDKSEGVG-KVQKAAQK 456
>EF1A_TETPY (Q04634) Elongation factor 1-alpha (EF-1-alpha) (14-nm| filament-associated protein) Length = 435 Score = 38.1 bits (87), Expect = 0.007 Identities = 18/21 (85%), Positives = 20/21 (95%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKD 82 AVRDM+QTVAVGVIK V+KKD Sbjct: 414 AVRDMKQTVAVGVIKKVEKKD 434
>EF1A_DICDI (P18624) Elongation factor 1-alpha (EF-1-alpha) (50 kDa| actin-binding protein) (ABP-50) Length = 456 Score = 37.7 bits (86), Expect = 0.009 Identities = 21/31 (67%), Positives = 21/31 (67%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAA 52 AVRDMRQTVAVGVIK KK P A K A Sbjct: 419 AVRDMRQTVAVGVIKSTVKKAPGKAGDKKGA 449
>EF1A_CRYPV (P90519) Elongation factor 1-alpha (EF-1-alpha)| Length = 435 Score = 37.7 bits (86), Expect = 0.009 Identities = 18/23 (78%), Positives = 20/23 (86%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPT 76 AVRDM+QTVAVGVIK V KK+ T Sbjct: 409 AVRDMKQTVAVGVIKSVTKKEAT 431
>EF1A_PLAFK (Q00080) Elongation factor 1-alpha (EF-1-alpha)| Length = 443 Score = 36.6 bits (83), Expect = 0.020 Identities = 18/34 (52%), Positives = 25/34 (73%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQVTKAAXKK 43 A+RDMRQT+AVG+I +++K+ GA KA KK Sbjct: 411 AIRDMRQTIAVGIINQLKRKN-LGAVTAKAPAKK 443
>EF11_EUPCR (Q27139) Elongation factor 1-alpha 1 (EF-1-alpha-1)| Length = 442 Score = 34.7 bits (78), Expect = 0.075 Identities = 16/20 (80%), Positives = 19/20 (95%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKK 85 AVRDMRQTVAVGVI+ ++KK Sbjct: 413 AVRDMRQTVAVGVIQEIKKK 432
>EF1A_ENTHI (P31018) Elongation factor 1-alpha (EF-1-alpha)| Length = 430 Score = 31.6 bits (70), Expect = 0.63 Identities = 14/17 (82%), Positives = 16/17 (94%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGV 94 AVRDM+QTVAVGV+K V Sbjct: 412 AVRDMKQTVAVGVVKAV 428
>EF1A1_XENLA (P17506) Elongation factor 1-alpha (EF-1-alpha) (42Sp50) (Thesaurin| A) Length = 463 Score = 31.6 bits (70), Expect = 0.63 Identities = 14/26 (53%), Positives = 19/26 (73%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKDPTGAQ 67 A RD++QTVAVGV+K V+ K A+ Sbjct: 428 AARDLKQTVAVGVVKSVEHKAGAAAR 453
>EF1A_BLAHO (P54959) Elongation factor 1-alpha (EF-1-alpha)| Length = 434 Score = 31.2 bits (69), Expect = 0.82 Identities = 14/15 (93%), Positives = 15/15 (100%) Frame = -1 Query: 144 AVRDMRQTVAVGVIK 100 AVRDMRQTVAVG+IK Sbjct: 414 AVRDMRQTVAVGIIK 428
>EF1S_PORPU (P50257) Elongation factor 1-alpha S (EF-1-alpha S)| (Sporophyte-specific EF-1-alpha) Length = 515 Score = 30.4 bits (67), Expect = 1.4 Identities = 14/21 (66%), Positives = 19/21 (90%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKD 82 AVRDM++TVAVGVI+ VQ ++ Sbjct: 458 AVRDMKKTVAVGVIQCVQPRN 478
>EF12_EUPCR (Q27140) Elongation factor 1-alpha 2 (EF-1-alpha-2)| Length = 439 Score = 29.3 bits (64), Expect = 3.1 Identities = 14/28 (50%), Positives = 20/28 (71%) Frame = -1 Query: 141 VRDMRQTVAVGVIKGVQKKDPTGAQVTK 58 +RDM++TVAVGVI+ V K T + +K Sbjct: 411 IRDMKRTVAVGVIQEVIHKKETKKKASK 438
>EF1A_PYRKO (Q5JFZ4) Elongation factor 1-alpha (EF-1-alpha) (Elongation factor| Tu) (EF-Tu) Length = 428 Score = 29.3 bits (64), Expect = 3.1 Identities = 12/21 (57%), Positives = 16/21 (76%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKD 82 A+RDM QTVA G++ +QK D Sbjct: 408 AIRDMGQTVAAGMVISIQKAD 428
>EF1A_THECE (P17197) Elongation factor 1-alpha (EF-1-alpha) (Elongation factor| Tu) (EF-Tu) Length = 428 Score = 27.7 bits (60), Expect = 9.1 Identities = 11/21 (52%), Positives = 16/21 (76%) Frame = -1 Query: 144 AVRDMRQTVAVGVIKGVQKKD 82 A+RDM QTVA G++ +QK + Sbjct: 408 AIRDMGQTVAAGMVISIQKAE 428 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 15,701,370 Number of Sequences: 219361 Number of extensions: 173115 Number of successful extensions: 570 Number of sequences better than 10.0: 83 Number of HSP's better than 10.0 without gapping: 568 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 570 length of database: 80,573,946 effective HSP length: 23 effective length of database: 75,528,643 effective search space used: 1812687432 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
