Clone Name | rbasd16p24 |
---|---|
Clone Library Name | barley_pub |
>GLTP_MOUSE (Q9JL62) Glycolipid transfer protein (GLTP)| Length = 208 Score = 78.2 bits (191), Expect = 2e-14 Identities = 47/146 (32%), Positives = 75/146 (51%), Gaps = 8/146 (5%) Frame = -2 Query: 618 PFLDVCKQILPVLDKFGAAMAI-VKSDIGGNITRLENKYSSDPAKYEHLYTMVQEEVVKK 442 PFL+ + P D G+ + +K+DI GNIT+++ Y +DPAK++ L +++ E Sbjct: 21 PFLEAVAHLPPFFDCLGSPVFTPIKADISGNITKIKAVYDTDPAKFKTLQNILEVEKGMY 80 Query: 441 TAKGSS-SCTNGLLWLTRAMDFLVELFRNLLD------HPDWTMSQACTDSYTKTLKKWH 283 A+ T LLWL R + F+ +++ D HP+ A +Y LKK+H Sbjct: 81 GAEWPKVGATLALLWLKRGLRFIQVFLQSICDGERDENHPNLIRVNA-NKAYEMALKKYH 139 Query: 282 GWLASSSFTVAMKLAPNKDKFMEVIS 205 GWL F A+ AP K F++ +S Sbjct: 140 GWLVQKIFKAALYAAPYKSDFLKALS 165
>GLTP_HUMAN (Q9NZD2) Glycolipid transfer protein (GLTP)| Length = 208 Score = 77.0 bits (188), Expect = 4e-14 Identities = 45/146 (30%), Positives = 75/146 (51%), Gaps = 8/146 (5%) Frame = -2 Query: 618 PFLDVCKQILPVLDKFGAAMAI-VKSDIGGNITRLENKYSSDPAKYEHLYTMVQEEVVKK 442 PFL+ + P D G+ + +K+DI GNIT+++ Y ++PAK+ L +++ E Sbjct: 21 PFLEAVSHLPPFFDCLGSPVFTPIKADISGNITKIKAVYDTNPAKFRTLQNILEVEKEMY 80 Query: 441 TAKGSS-SCTNGLLWLTRAMDFLVELFRNLLD------HPDWTMSQACTDSYTKTLKKWH 283 A+ T L+WL R + F+ +++ D HP+ A T +Y LKK+H Sbjct: 81 GAEWPKVGATLALMWLKRGLRFIQVFLQSICDGERDENHPNLIRVNA-TKAYEMALKKYH 139 Query: 282 GWLASSSFTVAMKLAPNKDKFMEVIS 205 GW+ F A+ AP K F++ +S Sbjct: 140 GWIVQKIFQAALYAAPYKSDFLKALS 165
>GLTP_PIG (P68266) Glycolipid transfer protein (GLTP)| Length = 208 Score = 75.5 bits (184), Expect = 1e-13 Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 8/146 (5%) Frame = -2 Query: 618 PFLDVCKQILPVLDKFGAAMAI-VKSDIGGNITRLENKYSSDPAKYEHLYTMVQEEVVKK 442 PFL+ + P D G+ + +K+DI GNIT+++ Y ++P K+ L +++ E Sbjct: 21 PFLEAVSHLPPFFDCLGSPVFTPIKADISGNITKIKAVYDTNPTKFRTLQNILEVEKEMY 80 Query: 441 TAKGSS-SCTNGLLWLTRAMDFLVELFRNLLD------HPDWTMSQACTDSYTKTLKKWH 283 A+ T L+WL R + F+ +++ D HP+ A T +Y LKK+H Sbjct: 81 GAEWPKVGATLALMWLKRGLRFIQVFLQSICDGERDENHPNLIRVNA-TKAYEMALKKYH 139 Query: 282 GWLASSSFTVAMKLAPNKDKFMEVIS 205 GW+ F A+ AP K F++ +S Sbjct: 140 GWIVQKIFQAALYAAPYKSDFLKALS 165
>GLTP_BOVIN (P68265) Glycolipid transfer protein (GLTP)| Length = 208 Score = 75.5 bits (184), Expect = 1e-13 Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 8/146 (5%) Frame = -2 Query: 618 PFLDVCKQILPVLDKFGAAMAI-VKSDIGGNITRLENKYSSDPAKYEHLYTMVQEEVVKK 442 PFL+ + P D G+ + +K+DI GNIT+++ Y ++P K+ L +++ E Sbjct: 21 PFLEAVSHLPPFFDCLGSPVFTPIKADISGNITKIKAVYDTNPTKFRTLQNILEVEKEMY 80 Query: 441 TAKGSS-SCTNGLLWLTRAMDFLVELFRNLLD------HPDWTMSQACTDSYTKTLKKWH 283 A+ T L+WL R + F+ +++ D HP+ A T +Y LKK+H Sbjct: 81 GAEWPKVGATLALMWLKRGLRFIQVFLQSICDGERDENHPNLIRVNA-TKAYEMALKKYH 139 Query: 282 GWLASSSFTVAMKLAPNKDKFMEVIS 205 GW+ F A+ AP K F++ +S Sbjct: 140 GWIVQKIFQAALYAAPYKSDFLKALS 165
>CP19A_ORYLA (Q92087) Cytochrome P450 19A1 (EC 1.14.14.1) (Aromatase) (CYPXIX)| (Estrogen synthetase) (P-450AROM) Length = 518 Score = 31.2 bits (69), Expect = 2.8 Identities = 14/44 (31%), Positives = 30/44 (68%), Gaps = 1/44 (2%) Frame = +2 Query: 515 SNLVIFPPI-SLFTIAIAAPNLSKTGKICLQTSRKGLDSMTPLS 643 +N+ ++ I + FT A+ PNL +T ++C+ +++ LD+++ LS Sbjct: 150 NNVALWKKIRTYFTKALTGPNLQQTVEVCVTSTQTHLDNLSSLS 193
>GUTA_BACSU (O34368) Probable glucitol transport protein gutA| Length = 463 Score = 30.4 bits (67), Expect = 4.8 Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 3/60 (5%) Frame = +2 Query: 362 RNSSTRKSMALVSHRSPLVQLDEPFAVF---FTTSSWTMVYKCSYFAGSEEYLFSNLVIF 532 + +K+++++ PL+ L F F F TMVY +Y +E++F V+F Sbjct: 230 KKQGIKKTLSVLFKNKPLLMLISSFLAFAIGFNIKLSTMVYYFTYNVNHKEFVFMGTVLF 289
>UBC3_YEAST (P14682) Ubiquitin-conjugating enzyme E2-34 kDa (EC 6.3.2.19)| (Ubiquitin-protein ligase) (Ubiquitin carrier protein) (Cell division control protein 34) (E3 ubiquitin ligase complex SCF subunit CDC34) Length = 295 Score = 30.4 bits (67), Expect = 4.8 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Frame = +2 Query: 500 EEYLFSNLVIFPPISLFTIAIAAPNLSKTGKICLQTSRKGLDSMTPLSDL-TW 655 E++ FS PP FT AI PN+ + G++C+ + D MT D TW Sbjct: 68 EDFPFS-----PPQFRFTPAIYHPNVYRDGRLCISILHQSGDPMTDEPDAETW 115
>UBC13_SCHPO (O13685) Ubiquitin-conjugating enzyme E2 13 (EC 6.3.2.19)| (Ubiquitin-protein ligase 13) (Ubiquitin carrier protein 13) Length = 148 Score = 30.0 bits (66), Expect = 6.3 Identities = 15/39 (38%), Positives = 20/39 (51%) Frame = +2 Query: 500 EEYLFSNLVIFPPISLFTIAIAAPNLSKTGKICLQTSRK 616 E +L + PP F I PN+ K G+ICL T +K Sbjct: 54 ELFLPDEYPMMPPNVRFLTKIYHPNVDKLGRICLSTLKK 92 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 96,649,539 Number of Sequences: 219361 Number of extensions: 1992620 Number of successful extensions: 5822 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 5677 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5818 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6200242422 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)