ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd17e23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AB027572.1| Triticum aestivum chloroplast DNA, 21.1-kb fragm... 1092 0.0
2dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome 1092 0.0
3gb|AF277721.1| Secale strictum subsp. kuprijanovii chloroplast R... 676 0.0
4gb|AF277720.1| Secale cereale chloroplast RNA polymerase subunit... 676 0.0
5gb|L25377.1|BMUCPRPOC2 Bromus tectorum chloroplast RNA polymeras... 535 e-149
6gb|U90826.1|SDU90826 Stipa dregeana RNA polymerase beta-subunit ... 482 e-133
7gb|L25384.1|PUBCPRPOC2 Phleum pratense chloroplast RNA polymeras... 416 e-113
8emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome 408 e-110
9emb|X17318.1|CLZMRPB Zea mays chloroplast trnC gene, rpoB gene, ... 408 e-110
10gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast,... 408 e-110
11gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome 408 e-110
12dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete ... 408 e-110
13gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar N... 389 e-105
14gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA... 389 e-105
15gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-1... 389 e-105
16emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chlor... 389 e-105
17emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4,... 389 e-105
18dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 389 e-105
19dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome 389 e-105
20gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome... 381 e-102
21gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar N... 381 e-102
22dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 381 e-102
23dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 381 e-102
24dbj|AP005408.2| Oryza sativa (japonica cultivar-group) genomic D... 381 e-102
25dbj|AK058964.1| Oryza sativa (japonica cultivar-group) cDNA clon... 381 e-102
26gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 381 e-102
27gb|AY607072.1| Hordeum vulgare subsp. spontaneum voucher H3139 R... 361 2e-96
28gb|AY607074.1| Hordeum brachyantherum subsp. californicum vouche... 353 5e-94
29gb|AY607073.1| Hordeum erectifolium voucher H1150 RNA polymerase... 353 5e-94
30gb|AY607075.1| Hordeum murinum subsp. glaucum voucher H810 RNA p... 345 1e-91
31gb|AY607088.1| Psathyrostachys rupestris subsp. daghestanica vou... 307 3e-80
32gb|U92263.1|AAU92263 Anisopogon avenaceus RNA polymerase beta-su... 305 1e-79
33gb|AY607089.1| Psathyrostachys caduca voucher H6702 RNA polymera... 297 3e-77
34gb|AY607087.1| Psathyrostachys caduca voucher H6700 RNA polymera... 297 3e-77
35gb|AY607086.1| Psathyrostachys huashanica voucher H3087 RNA poly... 297 3e-77
36gb|AY607085.1| Psathyrostachys fragilis subsp. villosus voucher ... 297 3e-77
37gb|AY607084.1| Psathyrostachys fragilis subsp. villosus voucher ... 297 3e-77
38gb|AY607083.1| Psathyrostachys fragilis subsp. villosus voucher ... 297 3e-77
39gb|AY607082.1| Psathyrostachys fragilis subsp. secaliformis vouc... 297 3e-77
40gb|AY607081.1| Psathyrostachys fragilis subsp. fragilis voucher ... 297 3e-77
41gb|AY607080.1| Psathyrostachys lanuginosa voucher H8803 RNA poly... 297 3e-77
42gb|AY607079.1| Psathyrostachys lanuginosa voucher H8803 RNA poly... 297 3e-77
43gb|AY607078.1| Psathyrostachys lanuginosa voucher H8803 RNA poly... 297 3e-77
44gb|AY607076.1| Psathyrostachys juncea voucher H7544 RNA polymera... 297 3e-77
45emb|Z14983.1|CHSBRPO21 S.bicolor chloroplast rpoC2 gene (C2.1) 291 2e-75
46emb|Z14984.1|CHSBRPO22 S.bicolor chloroplast rpoC2 gene (C2.2) 291 2e-75
47gb|U90824.1|BVU90824 Bambusa vulgaris RNA polymerase beta-subuni... 291 2e-75
48gb|AY607077.1| Psathyrostachys stoloniformis voucher H9182 RNA p... 289 6e-75
49gb|L25376.1|BZACPRPOC2 Briza maxima chloroplast RNA polymerase b... 274 4e-70
50gb|AF372167.1| Danthoniopsis dinteri DNA-directed RNA polymerase... 266 9e-68
51gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 254 4e-64
52gb|AC084831.6| Oryza sativa chromosome 3 BAC OSJNBa0077G22 genom... 254 4e-64
53dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 254 4e-64
54gb|AY174500.1| Tristachya leucothrix DNA-directed RNA polymerase... 250 5e-63
55gb|U92264.1|ADU92264 Arundo donax RNA polymerase beta-subunit (r... 214 3e-52
56gb|U95081.1|MJU95081 Moliniopsis japonica RNA polymerase beta-su... 202 1e-48
57gb|L25381.1|LYURPOC2 Lygeum spartum chloroplast RNA polymerase b... 200 5e-48
58ref|XM_475052.1| Oryza sativa (japonica cultivar-group), predic... 198 2e-47
59gb|L25382.1|NAUCPRPOC2 Nardus stricta chloroplast RNA polymerase... 196 7e-47
60gb|L25385.1|PGICPRPOC2 Phragmites australis RNA polymerase beta-... 194 3e-46
61gb|L25379.1|HKLCPRPOC2 Hakonechloa macra chloroplast RNA polymer... 194 3e-46
62gb|U95130.1|PAU95130 Phragmites australis RNA polymerase beta-su... 194 3e-46
63gb|U94393.1|HMU94393 Hakonechloa macra RNA polymerase beta-subun... 194 3e-46
64gb|U94392.1|GSU94392 Gynerium sagittatum RNA polymerase beta-sub... 194 3e-46
65gb|U96309.1|SSU96309 Spartochloa scirpoidea RNA polymerase beta-... 186 7e-44
66gb|U94824.1|KPU94824 Karroochloa purpurea RNA polymerase beta-su... 186 7e-44
67gb|AF372185.1| Panicum repens DNA-directed RNA polymerase beta' ... 184 3e-43
68gb|AY174499.1| Streptostachys asperifolia DNA-directed RNA polym... 182 1e-42
69gb|AY174487.1| Panicum euprepes DNA-directed RNA polymerase beta... 182 1e-42
70gb|U92265.1|CGU92265 Centropodia glauca RNA polymerase beta-subu... 182 1e-42
71gb|AY174495.1| Setaria macrostachya DNA-directed RNA polymerase ... 178 2e-41
72gb|U94334.1|CLU94334 Chasmanthium latifolium RNA polymerase beta... 178 2e-41
73gb|AY254806.1| Axonopus fissifolius DNA-directed RNA polymerase ... 174 3e-40
74gb|AY174485.1| Oplismenus hirtellus DNA-directed RNA polymerase ... 174 3e-40
75gb|AF372182.1| Otachyrium versicolor DNA-directed RNA polymerase... 174 3e-40
76gb|AF372181.1| Ophiochloa hydrolithica DNA-directed RNA polymera... 174 3e-40
77gb|U96318.1|MLU96318 Micraira lazaridisii RNA polymerase beta-su... 174 3e-40
78gb|U95082.1|MPU95082 Monachather paradoxus RNA polymerase beta-s... 174 3e-40
79gb|AY174498.1| Sorghum halepense DNA-directed RNA polymerase bet... 172 1e-39
80gb|U90828.1|SZU90828 Stipagrostis zeyheri subsp. zeyheri RNA pol... 172 1e-39
81gb|L25380.1|LHHCPRPOC2 Lophatherum gracile chloroplast RNA polym... 170 4e-39
82gb|U95075.1|MGU95075 Merxmuellera guillarmodae RNA polymerase be... 167 6e-38
83gb|U94335.1|ASU94335 Amphipogon strictus RNA polymerase beta-sub... 163 1e-36
84gb|U94957.1|MDU94957 Merxmuellera dura RNA polymerase beta-subun... 163 1e-36
85gb|U95127.1|PTU95127 Pentameris thuarii RNA polymerase beta-subu... 161 4e-36
86gb|AY174480.1| Homolepis isocalycia DNA-directed RNA polymerase ... 159 2e-35
87gb|AY174473.1| Arthropogon villosus DNA-directed RNA polymerase ... 159 2e-35
88gb|U96314.1|RNU96314 Rytidosperma nudiflora RNA polymerase beta-... 159 2e-35
89gb|U96313.1|NLU96313 Notodanthonia laevis RNA polymerase beta-su... 159 2e-35
90gb|U96311.1|UPU96311 Urochlaena pusilla RNA polymerase beta-subu... 159 2e-35
91gb|U96310.1|TUU96310 Tribolium uniolae RNA polymerase beta-subun... 159 2e-35
92gb|U95076.1|MMU95076 Merxmuellera macowanii RNA polymerase beta-... 159 2e-35
93gb|U94956.1|MDU94956 Merxmuellera disticha RNA polymerase beta-s... 159 2e-35
94gb|U94955.1|MDU94955 Merxmuellera davyi RNA polymerase beta-subu... 159 2e-35
95gb|AY174494.1| Pheidochloa gracilis DNA-directed RNA polymerase ... 157 6e-35
96gb|U94394.1|JPU94394 Joycea pallida RNA polymerase beta-subunit ... 155 2e-34
97gb|AY174490.1| Panicum stoloniferum DNA-directed RNA polymerase ... 151 4e-33
98gb|AF372196.1| Panicum prionitis DNA-directed RNA polymerase bet... 151 4e-33
99gb|AF372161.1| Arthropogon lanceolatus DNA-directed RNA polymera... 151 4e-33
100gb|AF372160.1| Altoparadisium chapadense DNA-directed RNA polyme... 151 4e-33
101gb|U96312.1|RPU96312 Rytidosperma pumila RNA polymerase beta-sub... 151 4e-33
102gb|AY174478.1| Eriachne mucronata DNA-directed RNA polymerase be... 149 1e-32
103gb|AF372205.1| Steinchisma hians DNA-directed RNA polymerase bet... 149 1e-32
104gb|U96315.1|TMU96315 Thysanolaena maxima RNA polymerase beta-sub... 147 6e-32
105gb|AF355984.1| Merxmuellera decora RNA polymerase beta-subunit (... 145 2e-31
106gb|AF355983.1| Merxmuellera lupulina RNA polymerase beta-subunit... 145 2e-31
107gb|AF372184.1| Panicum laxum DNA-directed RNA polymerase beta' s... 145 2e-31
108gb|AF372183.1| Plagiantha tenella DNA-directed RNA polymerase be... 145 2e-31
109gb|U95079.1|MSU95079 Merxmuellera setacea RNA polymerase beta-su... 145 2e-31
110gb|U95078.1|MRU95078 Merxmuellera rufa RNA polymerase beta-subun... 145 2e-31
111gb|U94953.1|MAU94953 Merxmuellera arundinacea RNA polymerase bet... 145 2e-31
112gb|AY174491.1| Paspalum conjugatum DNA-directed RNA polymerase b... 143 9e-31
113gb|AY174479.1| Homolepis glutinosa DNA-directed RNA polymerase b... 143 9e-31
114gb|AY174474.1| Arundinella hirta DNA-directed RNA polymerase bet... 143 9e-31
115gb|U95080.1|MSU95080 Merxmuellera stricta RNA polymerase beta-su... 143 9e-31
116gb|AF372195.1| Panicum ovuliferum DNA-directed RNA polymerase be... 141 4e-30
117gb|AF372191.1| Panicum millegrana DNA-directed RNA polymerase be... 141 4e-30
118gb|AF372176.1| Echinolaena inflexa DNA-directed RNA polymerase b... 141 4e-30
119gb|AF064760.1|AF064760 Streptochaeta angustifolia DNA-directed R... 141 4e-30
120gb|AF355985.1| Merxmuellera cincta subsp. sericea RNA polymerase... 139 1e-29
121gb|U95362.1|U95362 Prionanthium ecklonii RNA polymerase beta-sub... 139 1e-29
122gb|U95129.1|PCU95129 Pentaschistis curvifolia RNA polymerase bet... 139 1e-29
123gb|U95361.1|U95361 Plinthanthesis paradoxa RNA polymerase beta-s... 137 6e-29
124gb|U95126.1|NMU95126 Notochloe microdon RNA polymerase beta-subu... 137 6e-29
125gb|U92701.1|U92701 Chionochloa macra RNA polymerase beta-subunit... 137 6e-29
126gb|AY174493.1| Paspalum malacophyllum DNA-directed RNA polymeras... 135 2e-28
127gb|AY174492.1| Paspalum conspersum DNA-directed RNA polymerase b... 135 2e-28
128gb|AY174472.1| Anthaenantiopsis rojasiana DNA-directed RNA polym... 135 2e-28
129gb|AF372211.1| Thrasya petrosa DNA-directed RNA polymerase beta'... 135 2e-28
130gb|AF372209.1| Tatianyx arnacites DNA-directed RNA polymerase be... 135 2e-28
131gb|AF372197.1| Paspalum quadrifarium DNA-directed RNA polymerase... 135 2e-28
132gb|AF372166.1| Chaetium bromoides DNA-directed RNA polymerase be... 133 9e-28
133gb|AF372206.1| Streptostachys ramosa DNA-directed RNA polymerase... 131 4e-27
134gb|AF372187.1| Paspalum fimbriatum DNA-directed RNA polymerase b... 131 4e-27
135gb|AF372186.1| Paspalum scrobiculatum DNA-directed RNA polymeras... 131 4e-27
136gb|U96308.1|SBU96308 Schismus barbatus RNA polymerase beta-subun... 131 4e-27
137gb|U94954.1|MCU94954 Merxmuellera cincta RNA polymerase beta-sub... 131 4e-27
138gb|U94952.1|LPU94952 Lamprothyrsus peruvianus RNA polymerase bet... 131 4e-27
139gb|AY174481.1| Hymenachne donacifolia DNA-directed RNA polymeras... 129 1e-26
140gb|AF355998.1| Cortaderia archboldii RNA polymerase beta-subunit... 129 1e-26
141gb|AF355993.1| Cortaderia araucana RNA polymerase beta-subunit (... 129 1e-26
142gb|AF355992.1| Cortaderia rudiuscula RNA polymerase beta-subunit... 129 1e-26
143gb|AF355991.1| Cortaderia columbiana RNA polymerase beta-subunit... 129 1e-26
144gb|AF355990.1| Cortaderia nitida RNA polymerase beta-subunit (rp... 129 1e-26
145gb|AF355989.1| Cortaderia hapalotricha RNA polymerase beta-subun... 129 1e-26
146gb|AF355988.1| Cortaderia bifida RNA polymerase beta-subunit (rp... 129 1e-26
147gb|AF355987.1| Cortaderia jubata RNA polymerase beta-subunit (rp... 129 1e-26
148gb|AF355986.1| Cortaderia sericantha RNA polymerase beta-subunit... 129 1e-26
149gb|U95128.1|PAU95128 Pentaschistis aspera RNA polymerase beta-su... 129 1e-26
150gb|U95077.1|MRU95077 Merxmuellera rangei RNA polymerase beta-sub... 129 1e-26
151gb|U93361.1|DSU93361 Danthonia secundiflora RNA polymerase beta-... 129 1e-26
152gb|U93360.1|CSU93360 Cortaderia selloana RNA polymerase beta-sub... 129 1e-26
153gb|AY174482.1| Ichnanthus pallens DNA-directed RNA polymerase be... 127 5e-26
154gb|AF355995.1| Cortaderia turbaria RNA polymerase beta-subunit (... 127 5e-26
155gb|AF372210.1| Thrasya glaziovii DNA-directed RNA polymerase bet... 127 5e-26
156gb|AF372190.1| Paspalidium geminatum DNA-directed RNA polymerase... 127 5e-26
157gb|U94391.1|DPU94391 Dregeochloa pumilla RNA polymerase beta-sub... 127 5e-26
158gb|U93362.1|DSU93362 Danthonia spicata RNA polymerase beta-subun... 127 5e-26
159gb|U90827.1|ACU90827 Aristida congesta subsp. barbicollis RNA po... 127 5e-26
160gb|AY174483.1| Isachne distichophylla DNA-directed RNA polymeras... 123 9e-25
161gb|AF372178.1| Leptocoryphium lanatum DNA-directed RNA polymeras... 123 9e-25
162gb|AF355997.1| Cortaderia toetoe RNA polymerase beta-subunit (rp... 121 3e-24
163gb|AF355996.1| Cortaderia richardii RNA polymerase beta-subunit ... 121 3e-24
164gb|AF355994.1| Cortaderia splendens RNA polymerase beta-subunit ... 121 3e-24
165gb|U96319.1|ESU96319 Enneapogon scaber RNA polymerase beta-subun... 121 3e-24
166gb|U96317.1|ECU96317 Eragrostis capensis RNA polymerase beta-sub... 121 3e-24
167gb|U93359.1|CFU93359 Cortaderia fulvida RNA polymerase beta-subu... 121 3e-24
168gb|AY174489.1| Panicum rudgei DNA-directed RNA polymerase beta' ... 119 1e-23
169gb|AF372180.1| Mesosetum chaseae DNA-directed RNA polymerase bet... 119 1e-23
170gb|AF064761.1|AF064761 Ehrharta dura DNA-directed RNA polymerase... 119 1e-23
171gb|U90825.1|OLU90825 Olyra latifolia RNA polymerase beta-subunit... 117 5e-23
172gb|AF372169.1| Panicum koolauense DNA-directed RNA polymerase be... 115 2e-22
173gb|AY174496.1| Setaria parviflora DNA-directed RNA polymerase be... 113 8e-22
174gb|AF000022.1|TBAF000022 Tristachya biseriata RNA polymerase bet... 113 8e-22
175gb|U92483.2|U92483 Chaetobromus dregeanus RNA polymerase beta-su... 109 1e-20
176gb|AY174497.1| Setaria sphacelata DNA-directed RNA polymerase be... 107 5e-20
177gb|AF372208.1| Setaria palmifolia DNA-directed RNA polymerase be... 107 5e-20
178gb|L25386.1|SRLCPRPOC2 Spartina alterniflora chloroplast RNA pol... 107 5e-20
179gb|AY174477.1| Cymbopogon citratus DNA-directed RNA polymerase b... 105 2e-19
180gb|AY174476.1| Coix lacryma-jobi DNA-directed RNA polymerase bet... 105 2e-19
181gb|AF372179.1| Melinis minutiflora DNA-directed RNA polymerase b... 105 2e-19
182gb|AF372165.1| Cenchrus agrimonioides DNA-directed RNA polymeras... 105 2e-19
183gb|AF064759.1|AF064759 Anomochloa marantoidea DNA-directed RNA p... 105 2e-19
184gb|U96307.1|PMU96307 Pseudopentameris macrantha RNA polymerase b... 105 2e-19
185gb|AF372207.1| Sacciolepis indica DNA-directed RNA polymerase be... 103 8e-19
186gb|L25378.1|EHHCORPOC2 Ehrharta stipoides chloroplast RNA polyme... 103 8e-19
187dbj|AP006955.1| Saccharum spontaneum chloroplast gene for RNA p... 101 3e-18
188dbj|AP006954.1| Saccharum spontaneum chloroplast gene for RNA po... 101 3e-18
189dbj|AP006953.1| Saccharum officinarum chloroplast gene for RNA p... 101 3e-18
190dbj|AP006952.1| Saccharum officinarum chloroplast gene for RNA p... 101 3e-18
191gb|U96321.1|SOU96321 Saccharum officinarum RNA polymerase beta-s... 101 3e-18
192gb|U96316.1|TBU96316 Tragus berteronianus RNA polymerase beta-su... 101 3e-18
193gb|AY174475.1| Chionachne koenigii DNA-directed RNA polymerase b... 98 5e-17
194gb|U96320.1|HHU96320 Hyparrhenia hirta RNA polymerase beta-subun... 98 5e-17
195gb|AY174501.1| Urochloa plantaginea DNA-directed RNA polymerase ... 96 2e-16
196gb|AF372192.1| Panicum mystasipum DNA-directed RNA polymerase be... 96 2e-16
197gb|AF372162.1| Brachiaria mutica DNA-directed RNA polymerase bet... 96 2e-16
198gb|AF000019.1|BSAF000019 Brachiaria serrata RNA polymerase beta-... 96 2e-16
199gb|AF372163.1| Cenchrus echinatus DNA-directed RNA polymerase be... 92 3e-15
200gb|AY174488.1| Panicum miliaceum DNA-directed RNA polymerase bet... 90 1e-14
201gb|AY174484.1| Lasiacis sorghoidea DNA-directed RNA polymerase b... 90 1e-14
202gb|AF372212.1| Urochloa acuminata DNA-directed RNA polymerase be... 90 1e-14
203gb|AF000020.1|RRAF000020 Rhynchelytrum repens subsp. repens RNA ... 90 1e-14
204gb|AF372170.1| Digitaria ciliaris DNA-directed RNA polymerase be... 88 5e-14
205gb|AF372164.1| Cenchrus ciliaris DNA-directed RNA polymerase bet... 84 7e-13
206gb|AY174486.1| Panicum aquaticum DNA-directed RNA polymerase bet... 82 3e-12
207gb|AF372202.1| Pseudechinolaena polystachya DNA-directed RNA pol... 82 3e-12
208gb|AF372194.1| Panicum pedersenii DNA-directed RNA polymerase be... 82 3e-12
209gb|L25383.1|PENCPRPOC2 Pennisetum sp. chloroplast RNA polymerase... 80 1e-11
210gb|AC145388.2| Oryza sativa chromosome 3 BAC OSJNBb0036M02 genom... 78 5e-11
211gb|AC135792.3| Oryza sativa chromosome 3 BAC OSJNBa0056E06 genom... 78 5e-11
212gb|AF372193.1| Panicum elephantipes DNA-directed RNA polymerase ... 78 5e-11
213gb|AF372188.1| Panicum fauriei DNA-directed RNA polymerase beta'... 76 2e-10
214gb|AF372203.1| Stenotaphrum secundatum DNA-directed RNA polymera... 74 7e-10
215gb|AF372175.1| Echinochloa colona DNA-directed RNA polymerase be... 74 7e-10
216gb|AF372174.1| Echinochloa crus-galli DNA-directed RNA polymeras... 74 7e-10
217gb|DQ069545.1| Typha latifolia RNA polymerase beta'' chain (rpoC... 72 3e-09
218gb|AF372189.1| Panicum nephelophilum DNA-directed RNA polymerase... 72 3e-09
219gb|AF039195.1|LCLRPO2 Lathraea clandestina chloroplast RNA polym... 72 3e-09
220gb|AF372173.1| Digitaria insularis DNA-directed RNA polymerase b... 70 1e-08
221gb|AF372168.1| Digitaria radicosa DNA-directed RNA polymerase be... 70 1e-08
222gb|AF000021.1|PMAF000021 Panicum maximum RNA polymerase beta-sub... 70 1e-08
223gb|AF372201.1| Pennisetum clandestinum DNA-directed RNA polymera... 68 4e-08
224gb|AF372199.1| Panicum tenuifolium DNA-directed RNA polymerase b... 68 4e-08
225gb|AF372198.1| Pennisetum setaceum DNA-directed RNA polymerase b... 68 4e-08
226gb|AF372177.1| Eriochloa punctata DNA-directed RNA polymerase be... 68 4e-08
227gb|AF372213.1| Urochloa reptans DNA-directed RNA polymerase beta... 66 2e-07
228gb|AF372204.1| Setaria gracilis DNA-directed RNA polymerase beta... 66 2e-07
229gb|AF372200.1| Pennisetum purpureum DNA-directed RNA polymerase ... 66 2e-07
230gb|AF372171.1| Digitaria setigera DNA-directed RNA polymerase be... 66 2e-07
231gb|DQ069546.1| Yucca schidigera RNA polymerase beta'' chain (rpo... 64 7e-07
232gb|AF372172.1| Digitaria violascens DNA-directed RNA polymerase ... 64 7e-07
233gb|AY521596.1| Cucumis sativus isolate GY-14, chloroplast sequence 62 3e-06
234gb|DQ069544.1| Ranunculus macranthus RNA polymerase beta'' chain... 62 3e-06
235gb|DQ069541.1| Acorus americanus RNA polymerase beta'' chain (rp... 62 3e-06
236emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA 62 3e-06
237emb|AJ970307.1| Cucumis sativus chloroplast complete genome 62 3e-06
238emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complet... 62 3e-06
239gb|AY582139.1| Panax ginseng chloroplast, complete genome 62 3e-06
240gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid... 62 3e-06
241emb|AJ879453.1| Acorus calamus chloroplast, complete genome 62 3e-06
242dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete s... 62 3e-06
243dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, compl... 62 3e-06
244gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, ... 62 3e-06
245gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast... 60 1e-05
246emb|AL606652.4| Oryza sativa genomic DNA, chromosome 4, BAC clon... 56 2e-04
247emb|AJ243754.2|SAL243754 Sinapis alba chloroplast rpoB operon (r... 54 7e-04
248emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast ... 54 7e-04
249gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence 54 7e-04
250gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, comp... 52 0.003
251gb|AY865171.1| Lactuca sativa chloroplast inversion region 52 0.003
252dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome 52 0.003
253gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, ... 50 0.010
254gb|AC007339.8| Homo sapiens chromosome 16 clone RP11-305A7, comp... 48 0.041
255gb|AC107085.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.16
256gb|DQ069543.1| Nuphar advena RNA polymerase beta'' chain (rpoC2)... 46 0.16
257gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, comple... 46 0.16
258gb|AY936355.1| Cuscuta europaea RpoC2 (rpoC2) gene, partial cds;... 46 0.16
259dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.16
260dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, co... 46 0.16
261gb|AC119969.15| Mus musculus chromosome 7, clone RP24-474K16, co... 44 0.63
262emb|AL669822.10| Mouse DNA sequence from clone RP23-47J12 on chr... 44 0.63
263gb|AC152933.2| Xenopus tropicalis clone ISB1-42B12, complete seq... 44 0.63
264dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020 44 0.63
265dbj|AK072361.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.63
266emb|AL731599.2|OSJN00244 Oryza sativa genomic DNA, chromosome 4,... 44 0.63
267gb|AC079021.5| Oryza sativa (japonica cultivar-group) chromosome... 42 2.5
268gb|AC147962.1| Oryza sativa chromosome 3 BAC OSJNBa0083K01 genom... 42 2.5
269gb|AC125222.4| Mus musculus BAC clone RP23-83G5 from 8, complete... 42 2.5
270emb|BX950182.13| Zebrafish DNA sequence from clone CH211-203B8 i... 42 2.5
271gb|AC156608.10| Mus musculus chromosome 8, clone RP23-303A11, co... 42 2.5
272gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, c... 42 2.5
273gb|AC091613.3| Homo sapiens chromosome 1 clone RP1-54E18, comple... 42 2.5
274gb|AC128645.5| Oryza sativa chromosome 3 BAC OSJNBb0016P23 genom... 42 2.5
275gb|AC167669.1| Mus musculus BAC clone RP24-138L8 from chromosome... 42 2.5
276gb|BC090480.1| Danio rerio cDNA clone IMAGE:6907901 42 2.5
277emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome 42 2.5
278gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloropla... 42 2.5
279gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, ... 42 2.5
280emb|CT025639.13| Mouse DNA sequence from clone RP23-233I11 on ch... 42 2.5
281dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome 42 2.5
282gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome 42 2.5
283dbj|AP006646.1| Lotus japonicus genomic DNA, chromosome 1, clone... 42 2.5
284gb|AF109905.1|MMHC213L3 Mus musculus major histocompatibility lo... 40 9.9
285gb|AE008400.1| Streptococcus pneumoniae R6 section 16 of 184 of ... 40 9.9
286gb|AC148991.2| Mus musculus BAC clone RP23-52N2 from chromosome ... 40 9.9
287gb|AC145802.2| Xenopus tropicalis clone CH216-80C17, complete se... 40 9.9
288gb|AC102087.12| Mus musculus chromosome 13, clone RP23-166D15, c... 40 9.9
289gb|AC102435.6| Mus musculus chromosome 12, clone RP24-123B22, co... 40 9.9
290emb|CT009723.4| Mouse DNA sequence from clone RP23-12L5 on chrom... 40 9.9
291gb|AC139886.3| Mus musculus BAC clone RP23-120M10 from chromosom... 40 9.9
292gb|AC129317.3| Mus musculus BAC clone RP23-443L14 from chromosom... 40 9.9
293gb|AC126280.4| Mus musculus BAC clone RP23-10P23 from 16, comple... 40 9.9
294gb|AC098727.3| Mus musculus BAC clone RP23-3H16 from 4, complete... 40 9.9
295gb|DQ249182.1| Homo sapiens isolate 541CLS41 haplotype HLA-B5001... 40 9.9
296gb|DQ249181.1| Homo sapiens isolate 541CLS37 haplotype HLA-B0702... 40 9.9
297gb|DQ249177.1| Homo sapiens isolate 218CLS60 haplotype HLA-B1501... 40 9.9
298gb|AC137845.9| Mus musculus chromosome 1, clone RP23-430H22, com... 40 9.9
299gb|AC163720.2| Mus musculus BAC clone RP23-424C5 from chromosome... 40 9.9
300emb|AL669830.9| Human DNA sequence from clone XXbac-118E17 on ch... 40 9.9
301emb|BX033679.1|CNS08Y5F Single read from an extremity of a full-... 40 9.9
302emb|BX029204.1|CNS08UP4 Single read from an extremity of a full-... 40 9.9
303emb|BX029203.1|CNS08UP3 Single read from an extremity of a full-... 40 9.9
304emb|BX026480.1|CNS08SLG Single read from an extremity of a full-... 40 9.9
305emb|BX026479.1|CNS08SLF Single read from an extremity of a full-... 40 9.9
306emb|BX020247.1|CNS08NSB Single read from an extremity of a full-... 40 9.9
307emb|BX011321.1|CNS08GWD Single read from an extremity of a full-... 40 9.9
308emb|AJ627251.1| Nymphaea alba chloroplast, complete genome 40 9.9
309emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloropl... 40 9.9
310emb|CR759772.4| Human DNA sequence from clone DAMC-192G6 on chro... 40 9.9
311emb|BX927139.8| Human DNA sequence from clone DAMA-72F24 on chro... 40 9.9
312gb|AC087117.9| Mus Musculus Strain C57BL6/J chromosome 17 BAC, R... 40 9.9
313gb|AC145457.1| Cicer arietinum strain FLIP84-92C clone gl1-40c9,... 40 9.9
314gb|AC079015.8| Homo sapiens chromosome 8, clone RP11-489O18, com... 40 9.9
315gb|AC091060.10| Homo sapiens chromosome 18, clone RP11-723J4, co... 40 9.9
316gb|AC134466.4| Mus musculus BAC clone RP23-463E4 from chromosome... 40 9.9
317gb|AC123690.19| Mus musculus chromosome 1, clone RP23-322M7, com... 40 9.9
318gb|AC010675.6|AC010675 Arabidopsis thaliana chromosome 1 BAC T17... 40 9.9
319gb|AE005672.2| Streptococcus pneumoniae TIGR4, complete genome 40 9.9
320dbj|BA000025.2| Homo sapiens genomic DNA, chromosome 6p21.3, HLA... 40 9.9
321dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete ge... 40 9.9
322emb|CR974444.18| Mouse DNA sequence from clone RP23-115O3 on chr... 40 9.9
323emb|CT009704.12| Mouse DNA sequence from clone RP23-115B21 on ch... 40 9.9
324emb|AL691475.18| Mouse DNA sequence from clone RP23-264P11 on ch... 40 9.9
325gb|AC148321.7| Mus musculus BAC clone RP24-512H17 from 19, compl... 40 9.9
326dbj|AB023048.1| Homo sapiens genomic DNA, chromosome 6p21.3, HLA... 40 9.9
327dbj|AB028630.1| Clostridium perfringens hyp27, bacH, ptp, cpd ge... 40 9.9 
>dbj|AB027572.1| Triticum aestivum chloroplast DNA, 21.1-kb fragment bearing RNA
             polymerase subunit (rpo) genes
          Length = 21245

 Score = 1092 bits (551), Expect = 0.0
 Identities = 680/728 (93%), Gaps = 9/728 (1%)
 Strand = Plus / Minus

                                                                         
Query: 1     tctttctggcggtatnaa-cacccacctaatatcttatctgcctcttcaggaaaatgaat 59
             ||||||||||||||| || || ||||||||||||||||| ||||||||||||||||||||
Sbjct: 16653 tctttctggcggtatcaaacagccacctaatatcttatccgcctcttcaggaaaatgaat 16594

                                                                         
Query: 60    atctccggaaaatattttgagttccgtatggcnnnnnnnnctcttcactcggaccagtcc 119
             ||||||||||||||||||||||||||||||||        ||||||||||||||||||||
Sbjct: 16593 atctccggaaaatattttgagttccgtatggcttttttttctcttcactcggaccagtcc 16534

                                                                         
Query: 120   gcctagtccacttcttgtattttttgtgagttgtgtatccactccaataatactattgtc 179
             |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16533 gcctagtcgacttcttgtattttttgtgagttgtgtatccactccaataatactattgtc 16474

                                                                         
Query: 180   aagtatctttagggatgaagatctcggcaagatatgaagttcttgaagaatgnnnnnnnn 239
             ||||||||||||||||||||||||||||||||||||||||||||||||||||        
Sbjct: 16473 aagtatctttagggatgaagatctcggcaagatatgaagttcttgaagaatgaaaaaaaa 16414

                                                                         
Query: 240   nccgatctacttctttttggtattttagactaaattcttttgttcctcgatgctcaatca 299
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16413 -ccgatctacttctttttggtattttagactaaattcttttgttcctcgatgctcaatca 16355

                                                                         
Query: 300   aaccctcnnnnnnnaagatggaatcttcctctgggctctcgtattcgtcctctgagtctt 359
             |||||||       |||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 16354 aaccctctttttttaagatggaatcttcctctgggctctcgtattcatcctctgaatctt 16295

                                                                         
Query: 360   cttctgagtcttcctctaaagtaccatatttttcctcgccgctttccccggggctgccat 419
             |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||
Sbjct: 16294 cttctgagtcttcctctaaagtaccatatttttcctctgcgctttccccggggctgccat 16235

                                                                         
Query: 420   attcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatttgc 479
             ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct: 16234 attcgtcttctgagtcttcctctatagttccatattcgtcctcttgggtcctatatttgc 16175

                                                                         
Query: 480   tctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttctctg 539
             |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16174 tctctgggctcccatattcctcttctgagtctttctctaaagtcctatattcgttctctg 16115

                                                                         
Query: 540   ggttcccatatttgttttctgggctcccatattcgttttctagggtttcatattcgtatt 599
             |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 16114 ggttcccatattcgttttctgggctcccatattcgtcttctagggtttcatattcgtatt 16055

                                                                         
Query: 600   cgtcttctaggattccatatttagattcttctanggtt------tcatattcgtcctctc 653
             ||||||||||||||||||||||||||||||||| ||||      ||||||||||||||||
Sbjct: 16054 cgtcttctaggattccatatttagattcttctagggtttcatattcatattcgtcctctc 15995

                                                                         
Query: 654   gggtcctgtattccgtgttctanggtctcatattcctcttctgagtcttccgctcgagtc 713
             |||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 15994 gggtcctgtatt-cgtcttctagggtctcatattcctcttctgagtcttccgctcgagtc 15936

                     
Query: 714   ctatattc 721
             ||||||||
Sbjct: 15935 ctatattc 15928
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>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome
          Length = 134545

 Score = 1092 bits (551), Expect = 0.0
 Identities = 680/728 (93%), Gaps = 9/728 (1%)
 Strand = Plus / Minus

                                                                         
Query: 1     tctttctggcggtatnaa-cacccacctaatatcttatctgcctcttcaggaaaatgaat 59
             ||||||||||||||| || || ||||||||||||||||| ||||||||||||||||||||
Sbjct: 28007 tctttctggcggtatcaaacagccacctaatatcttatccgcctcttcaggaaaatgaat 27948

                                                                         
Query: 60    atctccggaaaatattttgagttccgtatggcnnnnnnnnctcttcactcggaccagtcc 119
             ||||||||||||||||||||||||||||||||        ||||||||||||||||||||
Sbjct: 27947 atctccggaaaatattttgagttccgtatggcttttttttctcttcactcggaccagtcc 27888

                                                                         
Query: 120   gcctagtccacttcttgtattttttgtgagttgtgtatccactccaataatactattgtc 179
             |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27887 gcctagtcgacttcttgtattttttgtgagttgtgtatccactccaataatactattgtc 27828

                                                                         
Query: 180   aagtatctttagggatgaagatctcggcaagatatgaagttcttgaagaatgnnnnnnnn 239
             ||||||||||||||||||||||||||||||||||||||||||||||||||||        
Sbjct: 27827 aagtatctttagggatgaagatctcggcaagatatgaagttcttgaagaatgaaaaaaaa 27768

                                                                         
Query: 240   nccgatctacttctttttggtattttagactaaattcttttgttcctcgatgctcaatca 299
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27767 -ccgatctacttctttttggtattttagactaaattcttttgttcctcgatgctcaatca 27709

                                                                         
Query: 300   aaccctcnnnnnnnaagatggaatcttcctctgggctctcgtattcgtcctctgagtctt 359
             |||||||       |||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 27708 aaccctctttttttaagatggaatcttcctctgggctctcgtattcatcctctgaatctt 27649

                                                                         
Query: 360   cttctgagtcttcctctaaagtaccatatttttcctcgccgctttccccggggctgccat 419
             |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||
Sbjct: 27648 cttctgagtcttcctctaaagtaccatatttttcctctgcgctttccccggggctgccat 27589

                                                                         
Query: 420   attcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatttgc 479
             ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct: 27588 attcgtcttctgagtcttcctctatagttccatattcgtcctcttgggtcctatatttgc 27529

                                                                         
Query: 480   tctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttctctg 539
             |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27528 tctctgggctcccatattcctcttctgagtctttctctaaagtcctatattcgttctctg 27469

                                                                         
Query: 540   ggttcccatatttgttttctgggctcccatattcgttttctagggtttcatattcgtatt 599
             |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 27468 ggttcccatattcgttttctgggctcccatattcgtcttctagggtttcatattcgtatt 27409

                                                                         
Query: 600   cgtcttctaggattccatatttagattcttctanggt------ttcatattcgtcctctc 653
             ||||||||||||||||||||||||||||||||| |||      |||||||||||||||||
Sbjct: 27408 cgtcttctaggattccatatttagattcttctagggtttcatattcatattcgtcctctc 27349

                                                                         
Query: 654   gggtcctgtattccgtgttctanggtctcatattcctcttctgagtcttccgctcgagtc 713
             |||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 27348 gggtcctgtatt-cgtcttctagggtctcatattcctcttctgagtcttccgctcgagtc 27290

                     
Query: 714   ctatattc 721
             ||||||||
Sbjct: 27289 ctatattc 27282
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>gb|AF277721.1| Secale strictum subsp. kuprijanovii chloroplast RNA polymerase
            subunit beta-like gene, partial sequence
          Length = 1397

 Score =  676 bits (341), Expect = 0.0
 Identities = 410/435 (94%), Gaps = 7/435 (1%)
 Strand = Plus / Minus

                                                                        
Query: 293  tcaatcaaaccctcnnnnnnnaagatggaatcttcctctgggctctcgtattcgtcctct 352
            ||||||||||||||       |||||||||||||||||||||||||||||||||||||||
Sbjct: 1370 tcaatcaaaccctctttttttaagatggaatcttcctctgggctctcgtattcgtcctct 1311

                                                                        
Query: 353  gagtcttcttctgagtcttcctctaaagtaccatatttttcctcgccgctttccccgggg 412
            || |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||
Sbjct: 1310 gaatcttcttctgagtcttcctctaaagtaccatatttttcctctgcgctttccccgggg 1251

                                                                        
Query: 413  ctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtccta 472
            |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 1250 ctgccatattcgtcttctgagtcttcctctagagttccatattcgtcctcttgggtccta 1191

                                                                        
Query: 473  tatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcg 532
            ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1190 tatttgctctctgggctcccatattcctcttctgagtctttctctaaagtcctatattcg 1131

                                                                        
Query: 533  ttctctgggttcccatatttgttttctgggctcccatattcgttttctagggtttcatat 592
            ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1130 ttctctgggttcccatattcgttttctgggctcccatattcgtcttctagggtttcatat 1071

                                                                        
Query: 593  tcgtattcgtcttctaggattccatatttagattcttctanggt------ttcatattcg 646
            |||||||||||||||||||||||||||||||||||||||| |||      ||||||||||
Sbjct: 1070 tcgtattcgtcttctaggattccatatttagattcttctagggtttcatattcatattcg 1011

                                                                        
Query: 647  tcctctcgggtcctgtattccgtgttctanggtctcatattcctcttctgagtcttccgc 706
            ||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 1010 tcctctcgggtcctgtatt-cgtcttctagggtctcatattcctcttctgagtcttccgc 952

                           
Query: 707  tcgagtcctatattc 721
            |||||||||||||||
Sbjct: 951  tcgagtcctatattc 937
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>gb|AF277720.1| Secale cereale chloroplast RNA polymerase subunit beta-like gene,
            partial sequence
          Length = 1397

 Score =  676 bits (341), Expect = 0.0
 Identities = 410/435 (94%), Gaps = 7/435 (1%)
 Strand = Plus / Minus

                                                                        
Query: 293  tcaatcaaaccctcnnnnnnnaagatggaatcttcctctgggctctcgtattcgtcctct 352
            ||||||||||||||       |||||||||||||||||||||||||||||||||||||||
Sbjct: 1370 tcaatcaaaccctctttttttaagatggaatcttcctctgggctctcgtattcgtcctct 1311

                                                                        
Query: 353  gagtcttcttctgagtcttcctctaaagtaccatatttttcctcgccgctttccccgggg 412
            || |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||
Sbjct: 1310 gaatcttcttctgagtcttcctctaaagtaccatatttttcctctgcgctttccccgggg 1251

                                                                        
Query: 413  ctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtccta 472
            |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 1250 ctgccatattcgtcttctgagtcttcctctagagttccatattcgtcctcttgggtccta 1191

                                                                        
Query: 473  tatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcg 532
            ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1190 tatttgctctctgggctcccatattcctcttctgagtctttctctaaagtcctatattcg 1131

                                                                        
Query: 533  ttctctgggttcccatatttgttttctgggctcccatattcgttttctagggtttcatat 592
            ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1130 ttctctgggttcccatattcgttttctgggctcccatattcgtcttctagggtttcatat 1071

                                                                        
Query: 593  tcgtattcgtcttctaggattccatatttagattcttctanggt------ttcatattcg 646
            |||||||||||||||||||||||||||||||||||||||| |||      ||||||||||
Sbjct: 1070 tcgtattcgtcttctaggattccatatttagattcttctagggtttcatattcatattcg 1011

                                                                        
Query: 647  tcctctcgggtcctgtattccgtgttctanggtctcatattcctcttctgagtcttccgc 706
            ||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 1010 tcctctcgggtcctgtatt-cgtcttctagggtctcatattcctcttctgagtcttccgc 952

                           
Query: 707  tcgagtcctatattc 721
            |||||||||||||||
Sbjct: 951  tcgagtcctatattc 937
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>gb|L25377.1|BMUCPRPOC2 Bromus tectorum chloroplast RNA polymerase beta-subunit (rpoC2)
           gene, partial cds
          Length = 495

 Score =  535 bits (270), Expect = e-149
 Identities = 373/408 (91%), Gaps = 16/408 (3%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 aagatagaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 419

                                                                       
Query: 374 tctaaagtaccatatttttcctcgccgctttccccggggctgccatattcgtcttctgag 433
           |||||||| |||||||| |||||  ||||||||||||||||||| |||||||||||||||
Sbjct: 418 tctaaagtcccatatttgtcctctgcgctttccccggggctgccgtattcgtcttctgag 359

                                                                       
Query: 434 tcttcttctaaagttccatattcgtcctcttgggtcctatatttgctctctgggttccca 493
           ||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 358 tcttcctctagagttccatattcgtcctcttgggtcctatatttgctctctgggctccca 299

                                                                       
Query: 494 tattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccatatttg 553
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 298 tattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccatattcg 239

                                                                       
Query: 554 ttttctgggctcccatattcgttttctagggtttcatattcgtattcgtcttctaggatt 613
           |||||||||||||||||||||| ||||| |||||||||      | |||| ||| |||||
Sbjct: 238 ttttctgggctcccatattcgtcttctaaggtttcata------tccgtcgtctcggatt 185

                                                                       
Query: 614 ccatatttagattcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttc 673
           |||||||||||         ||||||||||||||||||||||||||||||| |||| |||
Sbjct: 184 ccatatttaga---------ggtttcatattcgtcctctcgggtcctgtat-ccgtcttc 135

                                                           
Query: 674 tanggtctcatattcctcttctgagtcttccgctcgagtcctatattc 721
           || |||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 134 tagggtctcatattcctcttctgagtcttcctctcgcgtcctatattc 87
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>gb|U90826.1|SDU90826 Stipa dregeana RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 454

 Score =  482 bits (243), Expect = e-133
 Identities = 367/408 (89%), Gaps = 7/408 (1%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 454 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttcggagtcttcc 395

                                                                       
Query: 374 tctaaagtaccatatttttcctcgccgctttccccggggctgccatattcgtcttctgag 433
           |||||||| || ||||| |||||   || |||||| ||||| ||||||||||||||||||
Sbjct: 394 tctaaagtcccgtatttgtcctctgagccttcccccgggctcccatattcgtcttctgag 335

                                                                       
Query: 434 tcttcttctaaagttccatattcgtcctcttgggtcctatatttgctctctgggttccca 493
           ||||| ||||  |||||||||||||||||| |||||||||||| |||||| ||| |||||
Sbjct: 334 tcttcctctagcgttccatattcgtcctctcgggtcctatattggctctccgggctccca 275

                                                                       
Query: 494 tattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccatatttg 553
           ||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||| |
Sbjct: 274 tattcgtcttctgagtctttctctaaaatcctatattcgttctctgggctcccatattcg 215

                                                                       
Query: 554 ttttctgggctcccatattcgttttctagggtttcatattcgtattcgtcttctaggatt 613
           || ||||||||||||||||||| |||||||||||||      |||||||| |||||||| 
Sbjct: 214 ttctctgggctcccatattcgtcttctagggtttca------tattcgtcctctaggatc 161

                                                                       
Query: 614 ccatatttagattcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttc 673
           |||||||||  |||||||| ||||||||||||||||||||||||||| |||| ||| |||
Sbjct: 160 ccatatttatcttcttctagggtttcatattcgtcctctcgggtcctatatt-cgtcttc 102

                                                           
Query: 674 tanggtctcatattcctcttctgagtcttccgctcgagtcctatattc 721
           || |||||||||||| || |||||||||||| ||||||||||||||||
Sbjct: 101 tagggtctcatattcgtcctctgagtcttcctctcgagtcctatattc 54



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 88/105 (83%)
 Strand = Plus / Minus

                                                                       
Query: 434 tcttcttctaaagttccatattcgtcctcttgggtcctatatttgctctctgggttccca 493
           ||||||||||  ||| |||||||||||||| |||||||||||| |   ||| || || ||
Sbjct: 151 tcttcttctagggtttcatattcgtcctctcgggtcctatattcgtcttctagggtctca 92

                                                        
Query: 494 tattcctcttctgagtctttctctaaagtcctatattcgttctct 538
           ||||| || |||||||||| ||||  |||||||||||||| ||||
Sbjct: 91  tattcgtcctctgagtcttcctctcgagtcctatattcgtcctct 47



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                  
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcct 471
           |||||||||| ||||||||||| |||  ||| | ||||||||||||| |||||||
Sbjct: 93  catattcgtcctctgagtcttcctctcgagtcctatattcgtcctctagggtcct 39



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 640 atattcgtcctctcgggtcctgtat 664
           ||||||||||||| |||||||||||
Sbjct: 59  atattcgtcctctagggtcctgtat 35
to top
>gb|L25384.1|PUBCPRPOC2 Phleum pratense chloroplast RNA polymerase beta-subunit (rpoC2)
           gene, partial cds
          Length = 465

 Score =  416 bits (210), Expect = e-113
 Identities = 270/290 (93%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           ||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 448 aagatagaatcttcctctgggctctcgtattcgtcctcggagtcttcttctaagtcttcc 389

                                                                       
Query: 374 tctaaagtaccatatttttcctcgccgctttccccggggctgccatattcgtcttctgag 433
           |||||||| |||||||| |||||   ||||||||| ||||| ||||||||||||||||||
Sbjct: 388 tctaaagtcccatatttgtcctctgagctttcccccgggctcccatattcgtcttctgag 329

                                                                       
Query: 434 tcttcttctaaagttccatattcgtcctcttgggtcctatatttgctctctgggttccca 493
           ||||| |||| ||||||||||| | ||||| ||||||||||||||||||||||| |||||
Sbjct: 328 tcttcctctagagttccatatttgccctctcgggtcctatatttgctctctgggctccca 269

                                                                       
Query: 494 tattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccatatttg 553
           ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 268 tattcgtcttctgagtctttctctaaagtcctatattcgttctctgggttcccatattcg 209

                                                             
Query: 554 ttttctgggctcccatattcgttttctagggtttcatattcgtattcgtc 603
           || ||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 208 ttctctgggctcccatattcgtcttctagggtttcatattcgtattcgtc 159



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 74/81 (91%), Gaps = 1/81 (1%)
 Strand = Plus / Minus

                                                                       
Query: 641 tattcgtcctctcgggtcctgtattccgtgttctanggtctcatattcctcttctgagtc 700
           |||||||||||||||||||| ||||| || ||||| |||||||||||| |||||||||||
Sbjct: 166 tattcgtcctctcgggtcctatattc-gtcttctagggtctcatattcgtcttctgagtc 108

                                
Query: 701 ttccgctcgagtcctatattc 721
           |||  ||||||||||||||||
Sbjct: 107 ttcttctcgagtcctatattc 87



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                      
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           ||||||||||||||||||||||||||  ||| | |||||| |||||| |||||||||||
Sbjct: 126 catattcgtcttctgagtcttcttctcgagtcctatattcttcctctagggtcctatat 68



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 67/80 (83%)
 Strand = Plus / Minus

                                                                       
Query: 452 tattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtct 511
           |||||||||||| |||||||||||| |   ||| || || ||||||| ||||||||||||
Sbjct: 166 tattcgtcctctcgggtcctatattcgtcttctagggtctcatattcgtcttctgagtct 107

                               
Query: 512 ttctctaaagtcctatattc 531
           |  |||  ||||||||||||
Sbjct: 106 tcttctcgagtcctatattc 87



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 336 tctcgtattcgtcctctgagtcttcttct 364
           |||| |||||||| |||||||||||||||
Sbjct: 129 tctcatattcgtcttctgagtcttcttct 101



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| ||||||||||||| | ||  ||||||||||||
Sbjct: 270 catattcgtcttctgagtctttctctaaagtcctatattc 231
to top
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome
          Length = 140384

 Score =  408 bits (206), Expect = e-110
 Identities = 310/351 (88%), Gaps = 1/351 (0%)
 Strand = Plus / Minus

                                                                         
Query: 22    ccacctaatatcttatctgcctcttcaggaaaatgaatatctccggaaaatattttgagt 81
             ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 29639 ccacctaatatcttatccgcctcttcaggaaaatgaatatctccggaaaagattttgagt 29580

                                                                         
Query: 82    tccgtatggcnnnnnnnnctcttcactcggaccagtccgcctagtccacttcttgtattt 141
             || |||||||        |||||||||||||||| ||| ||||||| |||||||||||||
Sbjct: 29579 tctgtatggcttttttttctcttcactcggaccaatccacctagtcgacttcttgtattt 29520

                                                                         
Query: 142   tttgtgagttgtgtatccactccaataatactattgtcaagtatctttagggatgaagat 201
             ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 29519 tttgtgagttgtgtatcgactccaataatactattgtcaagtacctttagggatgaggat 29460

                                                                         
Query: 202   ctcggcaagatatgaagttcttgaagaatgnnnnnnnnnccgatctacttctttttggta 261
             |||||||||||||| |||||||||||||||         |||||||||||||||||||||
Sbjct: 29459 ctcggcaagatatgcagttcttgaagaatg-aaaaaaaaccgatctacttctttttggta 29401

                                                                         
Query: 262   ttttagactaaattcttttgttcctcgatgctcaatcaaaccctcnnnnnnnaagatgga 321
             |||||||||||||||||||||||||||||||||||| ||||||||       ||||| ||
Sbjct: 29400 ttttagactaaattcttttgttcctcgatgctcaataaaaccctctttttttaagataga 29341

                                                                
Query: 322   atcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttc 372
             ||||||||| |||||| | |||||||| ||||||||||| |||||||||||
Sbjct: 29340 atcttcctccgggctcccatattcgtcttctgagtcttcctctgagtcttc 29290



 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 76/85 (89%)
 Strand = Plus / Minus

                                                                         
Query: 467   gtcctatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtccta 526
             |||||||||||| ||||| || |||||||||| || |||||||||||||||| |||||||
Sbjct: 29177 gtcctatatttgttctctaggctcccatattcttcctctgagtctttctctagagtccta 29118

                                      
Query: 527   tattcgttctctgggttcccatatt 551
             ||||||| |||| || |||||||||
Sbjct: 29117 tattcgtcctctaggatcccatatt 29093



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 64/73 (87%)
 Strand = Plus / Minus

                                                                         
Query: 459   cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
             ||||| |||||||||||||| |||||||| || ||||||| ||||||||||||| |||| 
Sbjct: 29020 cctctcgggtcctatatttgttctctgggctctcatattcgtcttctgagtcttcctctc 28961

                          
Query: 519   aagtcctatattc 531
              ||||| ||||||
Sbjct: 28960 gagtccgatattc 28948



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 41/43 (95%)
 Strand = Plus / Minus

                                                        
Query: 347   tcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
             |||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 29303 tcctctgagtcttcttctgagtcttcttctaaagtcccatatt 29261



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                        
Query: 679   tctcatattcctcttctgagtcttccgctcgagtcctatattc 721
             |||||||||| ||||||||||||||| ||||||||| ||||||
Sbjct: 28990 tctcatattcgtcttctgagtcttcctctcgagtccgatattc 28948



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 61/71 (85%), Gaps = 3/71 (4%)
 Strand = Plus / Minus

                                                                         
Query: 596   tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
             |||||||| |||||||| ||||||| |   ||||||| ||||||||||||||||||| | 
Sbjct: 29117 tattcgtcctctaggatcccatattca---tcttctagggtttcatattcgtcctctaga 29061

                        
Query: 656   gtcctgtattc 666
             ||||| |||||
Sbjct: 29060 gtcctatattc 29050



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                             
Query: 425   tcttctgagtcttcttctaaagttccatattc 456
             ||||||||||||||||||||||| ||||||||
Sbjct: 29291 tcttctgagtcttcttctaaagtcccatattc 29260



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                       
Query: 417   catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctata 474
             |||||||||||||||||||||| |||  ||| | |||||| |||||| | ||||||||
Sbjct: 28987 catattcgtcttctgagtcttcctctcgagtccgatattcttcctctcgagtcctata 28930



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 410   gggctgccatattcgtcttctgagtcttc 438
             ||||| |||||||||||||||||||||||
Sbjct: 29330 gggctcccatattcgtcttctgagtcttc 29302



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                              
Query: 564   tcccatattcgttttctagggtttcatattcgt 596
             |||||||||| | ||||||||||||||||||||
Sbjct: 29101 tcccatattcatcttctagggtttcatattcgt 29069



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                              
Query: 328   ctctgggctctcgtattcgtcctctgagtcttc 360
             |||||||||||| |||||||| |||||||||||
Sbjct: 28998 ctctgggctctcatattcgtcttctgagtcttc 28966



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                     
Query: 500   tcttctgagtctttctctaaagtcctatattcgttctctg 539
             |||||||||||||  |||||||||| |||||| |||||||
Sbjct: 29291 tcttctgagtcttcttctaaagtcccatattccttctctg 29252



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                         
Query: 411   ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcc 470
             |||| |||||||| || ||||||||||  |||| ||| | ||||||||||||| || |||
Sbjct: 29158 ggctcccatattcttcctctgagtctttctctagagtcctatattcgtcctctaggatcc 29099

                   
Query: 471   tatatt 476
              |||||
Sbjct: 29098 catatt 29093



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 489   tcccatattcctcttctgagtctttctct 517
             |||||||||| ||||||||||||| ||||
Sbjct: 29326 tcccatattcgtcttctgagtcttcctct 29298



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 520   agtcctatattcgttctctgggttcccatatt 551
             ||||||||||| ||||||| || |||||||||
Sbjct: 29178 agtcctatatttgttctctaggctcccatatt 29147



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 682   catattcctcttctgagtcttccgctcgagtcctatattc 721
             ||||||| || |||||||||| | || |||||||||||||
Sbjct: 29152 catattcttcctctgagtctttctctagagtcctatattc 29113



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 437   tcttctaaagttccatattcgtcctcttgggtcctatatt 476
             |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 29090 tcttctagggtttcatattcgtcctctagagtcctatatt 29051
to top
>emb|X17318.1|CLZMRPB Zea mays chloroplast trnC gene, rpoB gene, rpoC1 gene, rpoC2 gene and
            rps2 gene for transfer RNA-Cys, RNA polymerase subunits
            beta, beta-1, beta-2 and ribosomal protein S2
            respectively
          Length = 12503

 Score =  408 bits (206), Expect = e-110
 Identities = 310/351 (88%), Gaps = 1/351 (0%)
 Strand = Plus / Minus

                                                                        
Query: 22   ccacctaatatcttatctgcctcttcaggaaaatgaatatctccggaaaatattttgagt 81
            ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 9553 ccacctaatatcttatccgcctcttcaggaaaatgaatatctccggaaaagattttgagt 9494

                                                                        
Query: 82   tccgtatggcnnnnnnnnctcttcactcggaccagtccgcctagtccacttcttgtattt 141
            || |||||||        |||||||||||||||| ||| ||||||| |||||||||||||
Sbjct: 9493 tctgtatggcttttttttctcttcactcggaccaatccacctagtcgacttcttgtattt 9434

                                                                        
Query: 142  tttgtgagttgtgtatccactccaataatactattgtcaagtatctttagggatgaagat 201
            ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 9433 tttgtgagttgtgtatcgactccaataatactattgtcaagtacctttagggatgaggat 9374

                                                                        
Query: 202  ctcggcaagatatgaagttcttgaagaatgnnnnnnnnnccgatctacttctttttggta 261
            |||||||||||||| |||||||||||||||         |||||||||||||||||||||
Sbjct: 9373 ctcggcaagatatgcagttcttgaagaatg-aaaaaaaaccgatctacttctttttggta 9315

                                                                        
Query: 262  ttttagactaaattcttttgttcctcgatgctcaatcaaaccctcnnnnnnnaagatgga 321
            |||||||||||||||||||||||||||||||||||| ||||||||       ||||| ||
Sbjct: 9314 ttttagactaaattcttttgttcctcgatgctcaataaaaccctctttttttaagataga 9255

                                                               
Query: 322  atcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttc 372
            ||||||||| |||||| | |||||||| ||||||||||| |||||||||||
Sbjct: 9254 atcttcctccgggctcccatattcgtcttctgagtcttcctctgagtcttc 9204



 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 76/85 (89%)
 Strand = Plus / Minus

                                                                        
Query: 467  gtcctatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtccta 526
            |||||||||||| ||||| || |||||||||| || |||||||||||||||| |||||||
Sbjct: 9091 gtcctatatttgttctctaggctcccatattcttcctctgagtctttctctagagtccta 9032

                                     
Query: 527  tattcgttctctgggttcccatatt 551
            ||||||| |||| || |||||||||
Sbjct: 9031 tattcgtcctctaggatcccatatt 9007



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 64/73 (87%)
 Strand = Plus / Minus

                                                                        
Query: 459  cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
            ||||| |||||||||||||| |||||||| || ||||||| ||||||||||||| |||| 
Sbjct: 8934 cctctcgggtcctatatttgttctctgggctctcatattcgtcttctgagtcttcctctc 8875

                         
Query: 519  aagtcctatattc 531
             ||||| ||||||
Sbjct: 8874 gagtccgatattc 8862



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 41/43 (95%)
 Strand = Plus / Minus

                                                       
Query: 347  tcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
            |||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 9217 tcctctgagtcttcttctgagtcttcttctaaagtcccatatt 9175



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                       
Query: 679  tctcatattcctcttctgagtcttccgctcgagtcctatattc 721
            |||||||||| ||||||||||||||| ||||||||| ||||||
Sbjct: 8904 tctcatattcgtcttctgagtcttcctctcgagtccgatattc 8862



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 61/71 (85%), Gaps = 3/71 (4%)
 Strand = Plus / Minus

                                                                        
Query: 596  tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
            |||||||| |||||||| ||||||| |   ||||||| ||||||||||||||||||| | 
Sbjct: 9031 tattcgtcctctaggatcccatattca---tcttctagggtttcatattcgtcctctaga 8975

                       
Query: 656  gtcctgtattc 666
            ||||| |||||
Sbjct: 8974 gtcctatattc 8964



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 425  tcttctgagtcttcttctaaagttccatattc 456
            ||||||||||||||||||||||| ||||||||
Sbjct: 9205 tcttctgagtcttcttctaaagtcccatattc 9174



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                      
Query: 417  catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctata 474
            |||||||||||||||||||||| |||  ||| | |||||| |||||| | ||||||||
Sbjct: 8901 catattcgtcttctgagtcttcctctcgagtccgatattcttcctctcgagtcctata 8844



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 410  gggctgccatattcgtcttctgagtcttc 438
            ||||| |||||||||||||||||||||||
Sbjct: 9244 gggctcccatattcgtcttctgagtcttc 9216



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 564  tcccatattcgttttctagggtttcatattcgt 596
            |||||||||| | ||||||||||||||||||||
Sbjct: 9015 tcccatattcatcttctagggtttcatattcgt 8983



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 328  ctctgggctctcgtattcgtcctctgagtcttc 360
            |||||||||||| |||||||| |||||||||||
Sbjct: 8912 ctctgggctctcatattcgtcttctgagtcttc 8880



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                    
Query: 500  tcttctgagtctttctctaaagtcctatattcgttctctg 539
            |||||||||||||  |||||||||| |||||| |||||||
Sbjct: 9205 tcttctgagtcttcttctaaagtcccatattccttctctg 9166



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                        
Query: 411  ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcc 470
            |||| |||||||| || ||||||||||  |||| ||| | ||||||||||||| || |||
Sbjct: 9072 ggctcccatattcttcctctgagtctttctctagagtcctatattcgtcctctaggatcc 9013

                  
Query: 471  tatatt 476
             |||||
Sbjct: 9012 catatt 9007



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 489  tcccatattcctcttctgagtctttctct 517
            |||||||||| ||||||||||||| ||||
Sbjct: 9240 tcccatattcgtcttctgagtcttcctct 9212



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 520  agtcctatattcgttctctgggttcccatatt 551
            ||||||||||| ||||||| || |||||||||
Sbjct: 9092 agtcctatatttgttctctaggctcccatatt 9061



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 682  catattcctcttctgagtcttccgctcgagtcctatattc 721
            ||||||| || |||||||||| | || |||||||||||||
Sbjct: 9066 catattcttcctctgagtctttctctagagtcctatattc 9027



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 437  tcttctaaagttccatattcgtcctcttgggtcctatatt 476
            |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 9004 tcttctagggtttcatattcgtcctctagagtcctatatt 8965
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>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome
          Length = 141182

 Score =  408 bits (206), Expect = e-110
 Identities = 313/355 (88%), Gaps = 1/355 (0%)
 Strand = Plus / Minus

                                                                         
Query: 22    ccacctaatatcttatctgcctcttcaggaaaatgaatatctccggaaaatattttgagt 81
             ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 91740 ccacctaatatcttatccgcctcttcaggaaaatgaatatctccggaaaagattttgagt 91681

                                                                         
Query: 82    tccgtatggcnnnnnnnnctcttcactcggaccagtccgcctagtccacttcttgtattt 141
             || |||||||        |||||||||||||||| ||| ||||||| |||||||||||||
Sbjct: 91680 tctgtatggcttttttttctcttcactcggaccaatccacctagtcgacttcttgtattt 91621

                                                                         
Query: 142   tttgtgagttgtgtatccactccaataatactattgtcaagtatctttagggatgaagat 201
             ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 91620 tttgtgagttgtgtatcgactccaataatactattgtcaagtacctttagggatgaggat 91561

                                                                         
Query: 202   ctcggcaagatatgaagttcttgaagaatgnnnnnnnnnccgatctacttctttttggta 261
             |||||||||||||| |||||||||||||||         |||||||||||||||||||||
Sbjct: 91560 ctcggcaagatatgcagttcttgaagaatg-aaaaaaaaccgatctacttctttttggta 91502

                                                                         
Query: 262   ttttagactaaattcttttgttcctcgatgctcaatcaaaccctcnnnnnnnaagatgga 321
             |||||||||||||||||||||||||||||||||||| ||||||||       ||||| ||
Sbjct: 91501 ttttagactaaattcttttgttcctcgatgctcaataaaaccctctttttttaagataga 91442

                                                                    
Query: 322   atcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctct 376
             || |||||| |||||| | |||||||| ||||||||||| |||||||||||||||
Sbjct: 91441 attttcctccgggctcccatattcgtcttctgagtcttcctctgagtcttcctct 91387



 Score =  101 bits (51), Expect = 3e-18
 Identities = 81/91 (89%)
 Strand = Plus / Minus

                                                                         
Query: 459   cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
             ||||| |||||||||||||| ||||| || |||||||||| || ||||||||||||||||
Sbjct: 91286 cctctcgggtcctatatttgttctctaggctcccatattcttcctctgagtctttctcta 91227

                                            
Query: 519   aagtcctatattcgttctctgggttcccata 549
              |||||||||||||| |||| || |||||||
Sbjct: 91226 gagtcctatattcgtcctctaggatcccata 91196



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 62/70 (88%)
 Strand = Plus / Minus

                                                                         
Query: 459   cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
             ||||| |||||||||||||| |||||||| || ||||||| ||||||||||||| |||| 
Sbjct: 91121 cctctcgggtcctatatttgttctctgggctctcatattcgtcttctgagtcttcctctc 91062

                       
Query: 519   aagtcctata 528
              |||||||||
Sbjct: 91061 gagtcctata 91052



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                     
Query: 679   tctcatattcctcttctgagtcttccgctcgagtcctata 718
             |||||||||| ||||||||||||||| |||||||||||||
Sbjct: 91091 tctcatattcgtcttctgagtcttcctctcgagtcctata 91052



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                        
Query: 347   tcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
             |||||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 91404 tcctctgagtcttcctctgagtcttcttctaaagtcccatatt 91362



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                      
Query: 626   tcttctanggtttcatattcgtcctctcgggtcctgtattc 666
             ||||||| ||||||||||||||||||| | ||||| |||||
Sbjct: 91191 tcttctagggtttcatattcgtcctctagagtcctatattc 91151



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 410   gggctgccatattcgtcttctgagtcttc 438
             ||||| |||||||||||||||||||||||
Sbjct: 91431 gggctcccatattcgtcttctgagtcttc 91403



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 428   tctgagtcttcttctaaagttccatattc 456
             |||||||||||||||||||| ||||||||
Sbjct: 91389 tctgagtcttcttctaaagtcccatattc 91361



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                              
Query: 328   ctctgggctctcgtattcgtcctctgagtcttc 360
             |||||||||||| |||||||| |||||||||||
Sbjct: 91099 ctctgggctctcatattcgtcttctgagtcttc 91067



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                         
Query: 417   catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatt 476
             |||||||||||||||||||||| |||  ||| | ||| || |||||| |||||| |||||
Sbjct: 91088 catattcgtcttctgagtcttcctctcgagtcctatactcttcctctcgggtccgatatt 91029



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 489   tcccatattcctcttctgagtctttctcta 518
             |||||||||| ||||||||||||| |||||
Sbjct: 91337 tcccatattcttcttctgagtcttcctcta 91308



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 356   tcttcttctgagtcttcctcta 377
             ||||||||||||||||||||||
Sbjct: 91329 tcttcttctgagtcttcctcta 91308



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 489   tcccatattcctcttctgagtctttctct 517
             |||||||||| ||||||||||||| ||||
Sbjct: 91427 tcccatattcgtcttctgagtcttcctct 91399



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                  
Query: 411   ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctct 463
             |||| |||||||| || ||||||||||  |||| ||| | |||||||||||||
Sbjct: 91259 ggctcccatattcttcctctgagtctttctctagagtcctatattcgtcctct 91207



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 564   tcccatattcgttttctagggtttcatattcgt 596
             ||||||| || | ||||||||||||||||||||
Sbjct: 91202 tcccatactcatcttctagggtttcatattcgt 91170



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 596   tattcgtcttctaggattccatatt 620
             |||||||||||||||||| ||||||
Sbjct: 91155 tattcgtcttctaggatttcatatt 91131



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 682   catattcctcttctgagtcttccgctcgagtcctatattc 721
             ||||||| || |||||||||| | || |||||||||||||
Sbjct: 91253 catattcttcctctgagtctttctctagagtcctatattc 91214



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 437   tcttctaaagttccatattcgtcctcttgggtcctatatt 476
             |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 91191 tcttctagggtttcatattcgtcctctagagtcctatatt 91152



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 568   atattcgttttctagggtttcatattcg 595
             |||||||| ||||||| |||||||||||
Sbjct: 91156 atattcgtcttctaggatttcatattcg 91129
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>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome
          Length = 140454

 Score =  408 bits (206), Expect = e-110
 Identities = 310/351 (88%), Gaps = 1/351 (0%)
 Strand = Plus / Minus

                                                                         
Query: 22    ccacctaatatcttatctgcctcttcaggaaaatgaatatctccggaaaatattttgagt 81
             ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 29638 ccacctaatatcttatccgcctcttcaggaaaatgaatatctccggaaaagattttgagt 29579

                                                                         
Query: 82    tccgtatggcnnnnnnnnctcttcactcggaccagtccgcctagtccacttcttgtattt 141
             || |||||||        |||||||||||||||| ||| ||||||| |||||||||||||
Sbjct: 29578 tctgtatggcttttttttctcttcactcggaccaatccacctagtcgacttcttgtattt 29519

                                                                         
Query: 142   tttgtgagttgtgtatccactccaataatactattgtcaagtatctttagggatgaagat 201
             ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 29518 tttgtgagttgtgtatcgactccaataatactattgtcaagtacctttagggatgaggat 29459

                                                                         
Query: 202   ctcggcaagatatgaagttcttgaagaatgnnnnnnnnnccgatctacttctttttggta 261
             |||||||||||||| |||||||||||||||         |||||||||||||||||||||
Sbjct: 29458 ctcggcaagatatgcagttcttgaagaatg-aaaaaaaaccgatctacttctttttggta 29400

                                                                         
Query: 262   ttttagactaaattcttttgttcctcgatgctcaatcaaaccctcnnnnnnnaagatgga 321
             |||||||||||||||||||||||||||||||||||| ||||||||       ||||| ||
Sbjct: 29399 ttttagactaaattcttttgttcctcgatgctcaataaaaccctctttttttaagataga 29340

                                                                
Query: 322   atcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttc 372
             ||||||||| |||||| | |||||||| ||||||||||| |||||||||||
Sbjct: 29339 atcttcctccgggctcccatattcgtcttctgagtcttcctctgagtcttc 29289



 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 76/85 (89%)
 Strand = Plus / Minus

                                                                         
Query: 467   gtcctatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtccta 526
             |||||||||||| ||||| || |||||||||| || |||||||||||||||| |||||||
Sbjct: 29176 gtcctatatttgttctctaggctcccatattcttcctctgagtctttctctagagtccta 29117

                                      
Query: 527   tattcgttctctgggttcccatatt 551
             ||||||| |||| || |||||||||
Sbjct: 29116 tattcgtcctctaggatcccatatt 29092



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 64/73 (87%)
 Strand = Plus / Minus

                                                                         
Query: 459   cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
             ||||| |||||||||||||| |||||||| || ||||||| ||||||||||||| |||| 
Sbjct: 29019 cctctcgggtcctatatttgttctctgggctctcatattcgtcttctgagtcttcctctc 28960

                          
Query: 519   aagtcctatattc 531
              ||||| ||||||
Sbjct: 28959 gagtccgatattc 28947



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 41/43 (95%)
 Strand = Plus / Minus

                                                        
Query: 347   tcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
             |||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 29302 tcctctgagtcttcttctgagtcttcttctaaagtcccatatt 29260



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                        
Query: 679   tctcatattcctcttctgagtcttccgctcgagtcctatattc 721
             |||||||||| ||||||||||||||| ||||||||| ||||||
Sbjct: 28989 tctcatattcgtcttctgagtcttcctctcgagtccgatattc 28947



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 61/71 (85%), Gaps = 3/71 (4%)
 Strand = Plus / Minus

                                                                         
Query: 596   tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
             |||||||| |||||||| ||||||| |   ||||||| ||||||||||||||||||| | 
Sbjct: 29116 tattcgtcctctaggatcccatattca---tcttctagggtttcatattcgtcctctaga 29060

                        
Query: 656   gtcctgtattc 666
             ||||| |||||
Sbjct: 29059 gtcctatattc 29049



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                             
Query: 425   tcttctgagtcttcttctaaagttccatattc 456
             ||||||||||||||||||||||| ||||||||
Sbjct: 29290 tcttctgagtcttcttctaaagtcccatattc 29259



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                       
Query: 417   catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctata 474
             |||||||||||||||||||||| |||  ||| | |||||| |||||| | ||||||||
Sbjct: 28986 catattcgtcttctgagtcttcctctcgagtccgatattcttcctctcgagtcctata 28929



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 410   gggctgccatattcgtcttctgagtcttc 438
             ||||| |||||||||||||||||||||||
Sbjct: 29329 gggctcccatattcgtcttctgagtcttc 29301



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                              
Query: 564   tcccatattcgttttctagggtttcatattcgt 596
             |||||||||| | ||||||||||||||||||||
Sbjct: 29100 tcccatattcatcttctagggtttcatattcgt 29068



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                              
Query: 328   ctctgggctctcgtattcgtcctctgagtcttc 360
             |||||||||||| |||||||| |||||||||||
Sbjct: 28997 ctctgggctctcatattcgtcttctgagtcttc 28965



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                     
Query: 500   tcttctgagtctttctctaaagtcctatattcgttctctg 539
             |||||||||||||  |||||||||| |||||| |||||||
Sbjct: 29290 tcttctgagtcttcttctaaagtcccatattccttctctg 29251



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                         
Query: 411   ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcc 470
             |||| |||||||| || ||||||||||  |||| ||| | ||||||||||||| || |||
Sbjct: 29157 ggctcccatattcttcctctgagtctttctctagagtcctatattcgtcctctaggatcc 29098

                   
Query: 471   tatatt 476
              |||||
Sbjct: 29097 catatt 29092



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 489   tcccatattcctcttctgagtctttctct 517
             |||||||||| ||||||||||||| ||||
Sbjct: 29325 tcccatattcgtcttctgagtcttcctct 29297



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 520   agtcctatattcgttctctgggttcccatatt 551
             ||||||||||| ||||||| || |||||||||
Sbjct: 29177 agtcctatatttgttctctaggctcccatatt 29146



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 682   catattcctcttctgagtcttccgctcgagtcctatattc 721
             ||||||| || |||||||||| | || |||||||||||||
Sbjct: 29151 catattcttcctctgagtctttctctagagtcctatattc 29112



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 437   tcttctaaagttccatattcgtcctcttgggtcctatatt 476
             |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 29089 tcttctagggtttcatattcgtcctctagagtcctatatt 29050
to top
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome
          Length = 141182

 Score =  408 bits (206), Expect = e-110
 Identities = 313/355 (88%), Gaps = 1/355 (0%)
 Strand = Plus / Minus

                                                                         
Query: 22    ccacctaatatcttatctgcctcttcaggaaaatgaatatctccggaaaatattttgagt 81
             ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 30113 ccacctaatatcttatccgcctcttcaggaaaatgaatatctccggaaaagattttgagt 30054

                                                                         
Query: 82    tccgtatggcnnnnnnnnctcttcactcggaccagtccgcctagtccacttcttgtattt 141
             || |||||||        |||||||||||||||| ||| ||||||| |||||||||||||
Sbjct: 30053 tctgtatggcttttttttctcttcactcggaccaatccacctagtcgacttcttgtattt 29994

                                                                         
Query: 142   tttgtgagttgtgtatccactccaataatactattgtcaagtatctttagggatgaagat 201
             ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 29993 tttgtgagttgtgtatcgactccaataatactattgtcaagtacctttagggatgaggat 29934

                                                                         
Query: 202   ctcggcaagatatgaagttcttgaagaatgnnnnnnnnnccgatctacttctttttggta 261
             |||||||||||||| |||||||||||||||         |||||||||||||||||||||
Sbjct: 29933 ctcggcaagatatgcagttcttgaagaatg-aaaaaaaaccgatctacttctttttggta 29875

                                                                         
Query: 262   ttttagactaaattcttttgttcctcgatgctcaatcaaaccctcnnnnnnnaagatgga 321
             |||||||||||||||||||||||||||||||||||| ||||||||       ||||| ||
Sbjct: 29874 ttttagactaaattcttttgttcctcgatgctcaataaaaccctctttttttaagataga 29815

                                                                    
Query: 322   atcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctct 376
             || |||||| |||||| | |||||||| ||||||||||| |||||||||||||||
Sbjct: 29814 attttcctccgggctcccatattcgtcttctgagtcttcctctgagtcttcctct 29760



 Score =  101 bits (51), Expect = 3e-18
 Identities = 81/91 (89%)
 Strand = Plus / Minus

                                                                         
Query: 459   cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
             ||||| |||||||||||||| ||||| || |||||||||| || ||||||||||||||||
Sbjct: 29659 cctctcgggtcctatatttgttctctaggctcccatattcttcctctgagtctttctcta 29600

                                            
Query: 519   aagtcctatattcgttctctgggttcccata 549
              |||||||||||||| |||| || |||||||
Sbjct: 29599 gagtcctatattcgtcctctaggatcccata 29569



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 62/70 (88%)
 Strand = Plus / Minus

                                                                         
Query: 459   cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
             ||||| |||||||||||||| |||||||| || ||||||| ||||||||||||| |||| 
Sbjct: 29494 cctctcgggtcctatatttgttctctgggctctcatattcgtcttctgagtcttcctctc 29435

                       
Query: 519   aagtcctata 528
              |||||||||
Sbjct: 29434 gagtcctata 29425



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                     
Query: 679   tctcatattcctcttctgagtcttccgctcgagtcctata 718
             |||||||||| ||||||||||||||| |||||||||||||
Sbjct: 29464 tctcatattcgtcttctgagtcttcctctcgagtcctata 29425



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                        
Query: 347   tcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
             |||||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 29777 tcctctgagtcttcctctgagtcttcttctaaagtcccatatt 29735



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                      
Query: 626   tcttctanggtttcatattcgtcctctcgggtcctgtattc 666
             ||||||| ||||||||||||||||||| | ||||| |||||
Sbjct: 29564 tcttctagggtttcatattcgtcctctagagtcctatattc 29524



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 410   gggctgccatattcgtcttctgagtcttc 438
             ||||| |||||||||||||||||||||||
Sbjct: 29804 gggctcccatattcgtcttctgagtcttc 29776



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 428   tctgagtcttcttctaaagttccatattc 456
             |||||||||||||||||||| ||||||||
Sbjct: 29762 tctgagtcttcttctaaagtcccatattc 29734



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                              
Query: 328   ctctgggctctcgtattcgtcctctgagtcttc 360
             |||||||||||| |||||||| |||||||||||
Sbjct: 29472 ctctgggctctcatattcgtcttctgagtcttc 29440



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                         
Query: 417   catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatt 476
             |||||||||||||||||||||| |||  ||| | ||| || |||||| |||||| |||||
Sbjct: 29461 catattcgtcttctgagtcttcctctcgagtcctatactcttcctctcgggtccgatatt 29402



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 489   tcccatattcctcttctgagtctttctcta 518
             |||||||||| ||||||||||||| |||||
Sbjct: 29710 tcccatattcttcttctgagtcttcctcta 29681



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 356   tcttcttctgagtcttcctcta 377
             ||||||||||||||||||||||
Sbjct: 29702 tcttcttctgagtcttcctcta 29681



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 489   tcccatattcctcttctgagtctttctct 517
             |||||||||| ||||||||||||| ||||
Sbjct: 29800 tcccatattcgtcttctgagtcttcctct 29772



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                  
Query: 411   ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctct 463
             |||| |||||||| || ||||||||||  |||| ||| | |||||||||||||
Sbjct: 29632 ggctcccatattcttcctctgagtctttctctagagtcctatattcgtcctct 29580



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 564   tcccatattcgttttctagggtttcatattcgt 596
             ||||||| || | ||||||||||||||||||||
Sbjct: 29575 tcccatactcatcttctagggtttcatattcgt 29543



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 596   tattcgtcttctaggattccatatt 620
             |||||||||||||||||| ||||||
Sbjct: 29528 tattcgtcttctaggatttcatatt 29504



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 682   catattcctcttctgagtcttccgctcgagtcctatattc 721
             ||||||| || |||||||||| | || |||||||||||||
Sbjct: 29626 catattcttcctctgagtctttctctagagtcctatattc 29587



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 437   tcttctaaagttccatattcgtcctcttgggtcctatatt 476
             |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 29564 tcttctagggtttcatattcgtcctctagagtcctatatt 29525



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 568   atattcgttttctagggtttcatattcg 595
             |||||||| ||||||| |||||||||||
Sbjct: 29529 atattcgtcttctaggatttcatattcg 29502
to top
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast,
             complete genome
          Length = 134551

 Score =  389 bits (196), Expect = e-105
 Identities = 318/365 (87%), Gaps = 1/365 (0%)
 Strand = Plus / Minus

                                                                         
Query: 22    ccacctaatatcttatctgcctcttcaggaaaatgaatatctccggaaaatattttgagt 81
             ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| |||
Sbjct: 27328 ccacctaatatcttatccgcctcttcaggaaaatgaatatctccagaaaagatttttagt 27269

                                                                         
Query: 82    tccgtatggcnnnnnnnnctcttcactcggaccagtccgcctagtccacttcttgtattt 141
             ||||||||||        ||||||||||| |||| ||| || || | |||||||||||||
Sbjct: 27268 tccgtatggcttttttttctcttcactcgaaccaatccacccagccgacttcttgtattt 27209

                                                                         
Query: 142   tttgtgagttgtgtatccactccaataatactattgtcaagtatctttagggatgaagat 201
             ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 27208 tttgtgagttgtgtatccactccaataatactattgtcaagtacctttagggatgaggat 27149

                                                                         
Query: 202   ctcggcaagatatgaagttcttgaagaatgnnnnnnnnnccgatctacttctttttggta 261
             |||||||||||||| |||||||| ||||||         |||||||||||||||||||||
Sbjct: 27148 ctcggcaagatatgcagttcttggagaatg-aaaaaaaaccgatctacttctttttggta 27090

                                                                         
Query: 262   ttttagactaaattcttttgttcctcgatgctcaatcaaaccctcnnnnnnnaagatgga 321
             |||||||||||||||||||||||||||||||||||||||| || |       |||| |||
Sbjct: 27089 ttttagactaaattcttttgttcctcgatgctcaatcaaaacccccttttttaagacgga 27030

                                                                         
Query: 322   atcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagt 381
             ||||||||| ||| || | |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 27029 atcttcctccgggttcccatattcgtcctctgagtcttcctctgagtcttcctctaaagt 26970

                  
Query: 382   accat 386
              ||||
Sbjct: 26969 cccat 26965



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 113/136 (83%)
 Strand = Plus / Minus

                                                                         
Query: 416   ccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
             |||| |||||| ||||||||||| |||||||| |||||||  |||||| ||| |||||||
Sbjct: 26968 ccatgttcgtcctctgagtcttcctctaaagtgccatatttatcctctcggggcctatat 26909

                                                                         
Query: 476   ttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttc 535
             ||| |||||||  |||||||||| || || || || | ||||  |||||||||||||| |
Sbjct: 26908 ttgttctctggactcccatattcgtcctcggattcctcctctcgagtcctatattcgtcc 26849

                             
Query: 536   tctgggttcccatatt 551
             ||| || | |||||||
Sbjct: 26848 tctaggattccatatt 26833



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 73/86 (84%)
 Strand = Plus / Minus

                                                                         
Query: 453   attcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctt 512
             |||| |||||| |||||||||||| | | |||||| |||| ||||| |  ||||||||||
Sbjct: 26730 attcttcctctcgggtcctatattcgttttctgggctcccgtattcgttctctgagtctt 26671

                                       
Query: 513   tctctaaagtcctatattcgttctct 538
             |||||  |||||||||||||| ||||
Sbjct: 26670 tctctcgagtcctatattcgtcctct 26645



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 50/57 (87%), Gaps = 3/57 (5%)
 Strand = Plus / Minus

                                                                      
Query: 596   tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctct 652
             |||||||| |||||||||||||||| |   ||||||| |||||||||||||| ||||
Sbjct: 26857 tattcgtcctctaggattccatattca---tcttctagggtttcatattcgttctct 26804



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                
Query: 362   tctgagtcttcctctaaagtaccatatttttcctc 396
             |||||||||||||||||||| |||||||| |||||
Sbjct: 26956 tctgagtcttcctctaaagtgccatatttatcctc 26922



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 72/87 (82%)
 Strand = Plus / Minus

                                                                         
Query: 489   tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
             |||||| ||| || |||||||||| ||||||||| | |||||  | |||| ||  || ||
Sbjct: 26970 tcccatgttcgtcctctgagtcttcctctaaagtgccatatttatcctctcggggcctat 26911

                                        
Query: 549   atttgttttctgggctcccatattcgt 575
             ||||||| ||||| |||||||||||||
Sbjct: 26910 atttgttctctggactcccatattcgt 26884



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                           
Query: 546   catatttgttttctgggctcccatattcgttttctagggtttcata 591
             |||||| ||| |||||| |||||||||| | |||||||||||||||
Sbjct: 26817 catattcgttctctgggatcccatattcatcttctagggtttcata 26772



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 79/96 (82%), Gaps = 1/96 (1%)
 Strand = Plus / Minus

                                                                         
Query: 626   tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
             ||||||| ||||| | |||| |||||||||||||| |||| ||| ||||  | || | ||
Sbjct: 26746 tcttctagggttttacattcttcctctcgggtcctatatt-cgttttctgggctcccgta 26688

                                                 
Query: 686   ttcctcttctgagtcttccgctcgagtcctatattc 721
             ||| |  |||||||||| | ||||||||||||||||
Sbjct: 26687 ttcgttctctgagtctttctctcgagtcctatattc 26652



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                 
Query: 428   tctgagtcttcttctaaagttccatattcgtcctct 463
             ||||||||||| |||||||| |||| ||||||||||
Sbjct: 26989 tctgagtcttcctctaaagtcccatgttcgtcctct 26954



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 566   ccatattcgttttctagggtttcatattcgt 596
             |||||||| | ||||||||||||||||||||
Sbjct: 26839 ccatattcatcttctagggtttcatattcgt 26809



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 329   tctgggctctcgtattcgtcctctgagtctt 359
             ||||||||| ||||||||| |||||||||||
Sbjct: 26701 tctgggctcccgtattcgttctctgagtctt 26671



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 526   atattcgttctctgggttcccatatt 551
             |||||||||||||||| |||||||||
Sbjct: 26816 atattcgttctctgggatcccatatt 26791



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 547   atatttgttttctgggctcccatattcgtt 576
             ||||| ||||||||||||||| ||||||||
Sbjct: 26711 atattcgttttctgggctcccgtattcgtt 26682



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                         
Query: 410   gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtc 469
             ||||| || |||||||  ||||||||||  |||  ||| | ||||||||||||| |||||
Sbjct: 26698 gggctcccgtattcgttctctgagtctttctctcgagtcctatattcgtcctctagggtc 26639

                   
Query: 470   ctatat 475
             ||||||
Sbjct: 26638 ctatat 26633



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 485   gggttcccatattcctcttctgagtctttctct 517
             |||||||||||||| || |||||||||| ||||
Sbjct: 27019 gggttcccatattcgtcctctgagtcttcctct 26987



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                  
Query: 503   tctgagtctttctctaaagtcctatattcgttctctg 539
             |||||||||| ||||||||||| || ||||| |||||
Sbjct: 26989 tctgagtcttcctctaaagtcccatgttcgtcctctg 26953



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 521   gtcctatattcgttctctgggttcccatatttgttttctg 560
             |||||||||||||| |||||| |||| |||| ||| ||||
Sbjct: 26716 gtcctatattcgttttctgggctcccgtattcgttctctg 26677
to top
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast,
             complete genome
          Length = 134551

 Score =  389 bits (196), Expect = e-105
 Identities = 318/365 (87%), Gaps = 1/365 (0%)
 Strand = Plus / Minus

                                                                         
Query: 22    ccacctaatatcttatctgcctcttcaggaaaatgaatatctccggaaaatattttgagt 81
             ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| |||
Sbjct: 27328 ccacctaatatcttatccgcctcttcaggaaaatgaatatctccagaaaagatttttagt 27269

                                                                         
Query: 82    tccgtatggcnnnnnnnnctcttcactcggaccagtccgcctagtccacttcttgtattt 141
             ||||||||||        ||||||||||| |||| ||| || || | |||||||||||||
Sbjct: 27268 tccgtatggcttttttttctcttcactcgaaccaatccacccagccgacttcttgtattt 27209

                                                                         
Query: 142   tttgtgagttgtgtatccactccaataatactattgtcaagtatctttagggatgaagat 201
             ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 27208 tttgtgagttgtgtatccactccaataatactattgtcaagtacctttagggatgaggat 27149

                                                                         
Query: 202   ctcggcaagatatgaagttcttgaagaatgnnnnnnnnnccgatctacttctttttggta 261
             |||||||||||||| |||||||| ||||||         |||||||||||||||||||||
Sbjct: 27148 ctcggcaagatatgcagttcttggagaatg-aaaaaaaaccgatctacttctttttggta 27090

                                                                         
Query: 262   ttttagactaaattcttttgttcctcgatgctcaatcaaaccctcnnnnnnnaagatgga 321
             |||||||||||||||||||||||||||||||||||||||| || |       |||| |||
Sbjct: 27089 ttttagactaaattcttttgttcctcgatgctcaatcaaaacccccttttttaagacgga 27030

                                                                         
Query: 322   atcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagt 381
             ||||||||| ||| || | |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 27029 atcttcctccgggttcccatattcgtcctctgagtcttcctctgagtcttcctctaaagt 26970

                  
Query: 382   accat 386
              ||||
Sbjct: 26969 cccat 26965



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 113/136 (83%)
 Strand = Plus / Minus

                                                                         
Query: 416   ccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
             |||| |||||| ||||||||||| |||||||| |||||||  |||||| ||| |||||||
Sbjct: 26968 ccatgttcgtcctctgagtcttcctctaaagtgccatatttatcctctcggggcctatat 26909

                                                                         
Query: 476   ttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttc 535
             ||| |||||||  |||||||||| || || || || | ||||  |||||||||||||| |
Sbjct: 26908 ttgttctctggactcccatattcgtcctcggattcctcctctcgagtcctatattcgtcc 26849

                             
Query: 536   tctgggttcccatatt 551
             ||| || | |||||||
Sbjct: 26848 tctaggattccatatt 26833



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 73/86 (84%)
 Strand = Plus / Minus

                                                                         
Query: 453   attcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctt 512
             |||| |||||| |||||||||||| | | |||||| |||| ||||| |  ||||||||||
Sbjct: 26730 attcttcctctcgggtcctatattcgttttctgggctcccgtattcgttctctgagtctt 26671

                                       
Query: 513   tctctaaagtcctatattcgttctct 538
             |||||  |||||||||||||| ||||
Sbjct: 26670 tctctcgagtcctatattcgtcctct 26645



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 50/57 (87%), Gaps = 3/57 (5%)
 Strand = Plus / Minus

                                                                      
Query: 596   tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctct 652
             |||||||| |||||||||||||||| |   ||||||| |||||||||||||| ||||
Sbjct: 26857 tattcgtcctctaggattccatattca---tcttctagggtttcatattcgttctct 26804



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                
Query: 362   tctgagtcttcctctaaagtaccatatttttcctc 396
             |||||||||||||||||||| |||||||| |||||
Sbjct: 26956 tctgagtcttcctctaaagtgccatatttatcctc 26922



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 72/87 (82%)
 Strand = Plus / Minus

                                                                         
Query: 489   tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
             |||||| ||| || |||||||||| ||||||||| | |||||  | |||| ||  || ||
Sbjct: 26970 tcccatgttcgtcctctgagtcttcctctaaagtgccatatttatcctctcggggcctat 26911

                                        
Query: 549   atttgttttctgggctcccatattcgt 575
             ||||||| ||||| |||||||||||||
Sbjct: 26910 atttgttctctggactcccatattcgt 26884



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                           
Query: 546   catatttgttttctgggctcccatattcgttttctagggtttcata 591
             |||||| ||| |||||| |||||||||| | |||||||||||||||
Sbjct: 26817 catattcgttctctgggatcccatattcatcttctagggtttcata 26772



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 79/96 (82%), Gaps = 1/96 (1%)
 Strand = Plus / Minus

                                                                         
Query: 626   tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
             ||||||| ||||| | |||| |||||||||||||| |||| ||| ||||  | || | ||
Sbjct: 26746 tcttctagggttttacattcttcctctcgggtcctatatt-cgttttctgggctcccgta 26688

                                                 
Query: 686   ttcctcttctgagtcttccgctcgagtcctatattc 721
             ||| |  |||||||||| | ||||||||||||||||
Sbjct: 26687 ttcgttctctgagtctttctctcgagtcctatattc 26652



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                 
Query: 428   tctgagtcttcttctaaagttccatattcgtcctct 463
             ||||||||||| |||||||| |||| ||||||||||
Sbjct: 26989 tctgagtcttcctctaaagtcccatgttcgtcctct 26954



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 566   ccatattcgttttctagggtttcatattcgt 596
             |||||||| | ||||||||||||||||||||
Sbjct: 26839 ccatattcatcttctagggtttcatattcgt 26809



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 329   tctgggctctcgtattcgtcctctgagtctt 359
             ||||||||| ||||||||| |||||||||||
Sbjct: 26701 tctgggctcccgtattcgttctctgagtctt 26671



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 526   atattcgttctctgggttcccatatt 551
             |||||||||||||||| |||||||||
Sbjct: 26816 atattcgttctctgggatcccatatt 26791



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 547   atatttgttttctgggctcccatattcgtt 576
             ||||| ||||||||||||||| ||||||||
Sbjct: 26711 atattcgttttctgggctcccgtattcgtt 26682



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                         
Query: 410   gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtc 469
             ||||| || |||||||  ||||||||||  |||  ||| | ||||||||||||| |||||
Sbjct: 26698 gggctcccgtattcgttctctgagtctttctctcgagtcctatattcgtcctctagggtc 26639

                   
Query: 470   ctatat 475
             ||||||
Sbjct: 26638 ctatat 26633



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 485   gggttcccatattcctcttctgagtctttctct 517
             |||||||||||||| || |||||||||| ||||
Sbjct: 27019 gggttcccatattcgtcctctgagtcttcctct 26987



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                  
Query: 503   tctgagtctttctctaaagtcctatattcgttctctg 539
             |||||||||| ||||||||||| || ||||| |||||
Sbjct: 26989 tctgagtcttcctctaaagtcccatgttcgtcctctg 26953



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 521   gtcctatattcgttctctgggttcccatatttgttttctg 560
             |||||||||||||| |||||| |||| |||| ||| ||||
Sbjct: 26716 gtcctatattcgttttctgggctcccgtattcgttctctg 26677
to top
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast,
             complete genome
          Length = 134496

 Score =  389 bits (196), Expect = e-105
 Identities = 318/365 (87%), Gaps = 1/365 (0%)
 Strand = Plus / Minus

                                                                         
Query: 22    ccacctaatatcttatctgcctcttcaggaaaatgaatatctccggaaaatattttgagt 81
             ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| |||
Sbjct: 27286 ccacctaatatcttatccgcctcttcaggaaaatgaatatctccagaaaagatttttagt 27227

                                                                         
Query: 82    tccgtatggcnnnnnnnnctcttcactcggaccagtccgcctagtccacttcttgtattt 141
             ||||||||||        ||||||||||| |||| ||| || || | |||||||||||||
Sbjct: 27226 tccgtatggcttttttttctcttcactcgaaccaatccacccagccgacttcttgtattt 27167

                                                                         
Query: 142   tttgtgagttgtgtatccactccaataatactattgtcaagtatctttagggatgaagat 201
             ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 27166 tttgtgagttgtgtatccactccaataatactattgtcaagtacctttagggatgaggat 27107

                                                                         
Query: 202   ctcggcaagatatgaagttcttgaagaatgnnnnnnnnnccgatctacttctttttggta 261
             |||||||||||||| |||||||| ||||||         |||||||||||||||||||||
Sbjct: 27106 ctcggcaagatatgcagttcttggagaatg-aaaaaaaaccgatctacttctttttggta 27048

                                                                         
Query: 262   ttttagactaaattcttttgttcctcgatgctcaatcaaaccctcnnnnnnnaagatgga 321
             |||||||||||||||||||||||||||||||||||||||| || |       |||| |||
Sbjct: 27047 ttttagactaaattcttttgttcctcgatgctcaatcaaaacccccttttttaagacgga 26988

                                                                         
Query: 322   atcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagt 381
             ||||||||| ||| || | |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 26987 atcttcctccgggttcccatattcgtcctctgagtcttcctctgagtcttcctctaaagt 26928

                  
Query: 382   accat 386
              ||||
Sbjct: 26927 cccat 26923



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 113/136 (83%)
 Strand = Plus / Minus

                                                                         
Query: 416   ccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
             |||| |||||| ||||||||||| |||||||| |||||||  |||||| ||| |||||||
Sbjct: 26926 ccatgttcgtcctctgagtcttcctctaaagtgccatatttatcctctcggggcctatat 26867

                                                                         
Query: 476   ttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttc 535
             ||| |||||||  |||||||||| || || || || | ||||  |||||||||||||| |
Sbjct: 26866 ttgttctctggactcccatattcgtcctcggattcctcctctcgagtcctatattcgtcc 26807

                             
Query: 536   tctgggttcccatatt 551
             ||| || | |||||||
Sbjct: 26806 tctaggattccatatt 26791



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 73/86 (84%)
 Strand = Plus / Minus

                                                                         
Query: 453   attcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctt 512
             |||| |||||| |||||||||||| | | |||||| |||| ||||| |  ||||||||||
Sbjct: 26688 attcttcctctcgggtcctatattcgttttctgggctcccgtattcgttctctgagtctt 26629

                                       
Query: 513   tctctaaagtcctatattcgttctct 538
             |||||  |||||||||||||| ||||
Sbjct: 26628 tctctcgagtcctatattcgtcctct 26603



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 50/57 (87%), Gaps = 3/57 (5%)
 Strand = Plus / Minus

                                                                      
Query: 596   tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctct 652
             |||||||| |||||||||||||||| |   ||||||| |||||||||||||| ||||
Sbjct: 26815 tattcgtcctctaggattccatattca---tcttctagggtttcatattcgttctct 26762



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                
Query: 362   tctgagtcttcctctaaagtaccatatttttcctc 396
             |||||||||||||||||||| |||||||| |||||
Sbjct: 26914 tctgagtcttcctctaaagtgccatatttatcctc 26880



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 72/87 (82%)
 Strand = Plus / Minus

                                                                         
Query: 489   tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
             |||||| ||| || |||||||||| ||||||||| | |||||  | |||| ||  || ||
Sbjct: 26928 tcccatgttcgtcctctgagtcttcctctaaagtgccatatttatcctctcggggcctat 26869

                                        
Query: 549   atttgttttctgggctcccatattcgt 575
             ||||||| ||||| |||||||||||||
Sbjct: 26868 atttgttctctggactcccatattcgt 26842



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                           
Query: 546   catatttgttttctgggctcccatattcgttttctagggtttcata 591
             |||||| ||| |||||| |||||||||| | |||||||||||||||
Sbjct: 26775 catattcgttctctgggatcccatattcatcttctagggtttcata 26730



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 79/96 (82%), Gaps = 1/96 (1%)
 Strand = Plus / Minus

                                                                         
Query: 626   tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
             ||||||| ||||| | |||| |||||||||||||| |||| ||| ||||  | || | ||
Sbjct: 26704 tcttctagggttttacattcttcctctcgggtcctatatt-cgttttctgggctcccgta 26646

                                                 
Query: 686   ttcctcttctgagtcttccgctcgagtcctatattc 721
             ||| |  |||||||||| | ||||||||||||||||
Sbjct: 26645 ttcgttctctgagtctttctctcgagtcctatattc 26610



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                 
Query: 428   tctgagtcttcttctaaagttccatattcgtcctct 463
             ||||||||||| |||||||| |||| ||||||||||
Sbjct: 26947 tctgagtcttcctctaaagtcccatgttcgtcctct 26912



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 566   ccatattcgttttctagggtttcatattcgt 596
             |||||||| | ||||||||||||||||||||
Sbjct: 26797 ccatattcatcttctagggtttcatattcgt 26767



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 329   tctgggctctcgtattcgtcctctgagtctt 359
             ||||||||| ||||||||| |||||||||||
Sbjct: 26659 tctgggctcccgtattcgttctctgagtctt 26629



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 526   atattcgttctctgggttcccatatt 551
             |||||||||||||||| |||||||||
Sbjct: 26774 atattcgttctctgggatcccatatt 26749



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 547   atatttgttttctgggctcccatattcgtt 576
             ||||| ||||||||||||||| ||||||||
Sbjct: 26669 atattcgttttctgggctcccgtattcgtt 26640



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                         
Query: 410   gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtc 469
             ||||| || |||||||  ||||||||||  |||  ||| | ||||||||||||| |||||
Sbjct: 26656 gggctcccgtattcgttctctgagtctttctctcgagtcctatattcgtcctctagggtc 26597

                   
Query: 470   ctatat 475
             ||||||
Sbjct: 26596 ctatat 26591



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 485   gggttcccatattcctcttctgagtctttctct 517
             |||||||||||||| || |||||||||| ||||
Sbjct: 26977 gggttcccatattcgtcctctgagtcttcctct 26945



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                  
Query: 503   tctgagtctttctctaaagtcctatattcgttctctg 539
             |||||||||| ||||||||||| || ||||| |||||
Sbjct: 26947 tctgagtcttcctctaaagtcccatgttcgtcctctg 26911



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 521   gtcctatattcgttctctgggttcccatatttgttttctg 560
             |||||||||||||| |||||| |||| |||| ||| ||||
Sbjct: 26674 gtcctatattcgttttctgggctcccgtattcgttctctg 26635
to top
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome
          Length = 134525

 Score =  389 bits (196), Expect = e-105
 Identities = 318/365 (87%), Gaps = 1/365 (0%)
 Strand = Plus / Minus

                                                                         
Query: 22    ccacctaatatcttatctgcctcttcaggaaaatgaatatctccggaaaatattttgagt 81
             ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| |||
Sbjct: 27326 ccacctaatatcttatccgcctcttcaggaaaatgaatatctccagaaaagatttttagt 27267

                                                                         
Query: 82    tccgtatggcnnnnnnnnctcttcactcggaccagtccgcctagtccacttcttgtattt 141
             ||||||||||        ||||||||||| |||| ||| || || | |||||||||||||
Sbjct: 27266 tccgtatggcttttttttctcttcactcgaaccaatccacccagccgacttcttgtattt 27207

                                                                         
Query: 142   tttgtgagttgtgtatccactccaataatactattgtcaagtatctttagggatgaagat 201
             ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 27206 tttgtgagttgtgtatccactccaataatactattgtcaagtacctttagggatgaggat 27147

                                                                         
Query: 202   ctcggcaagatatgaagttcttgaagaatgnnnnnnnnnccgatctacttctttttggta 261
             |||||||||||||| |||||||| ||||||         |||||||||||||||||||||
Sbjct: 27146 ctcggcaagatatgcagttcttggagaatg-aaaaaaaaccgatctacttctttttggta 27088

                                                                         
Query: 262   ttttagactaaattcttttgttcctcgatgctcaatcaaaccctcnnnnnnnaagatgga 321
             |||||||||||||||||||||||||||||||||||||||| || |       |||| |||
Sbjct: 27087 ttttagactaaattcttttgttcctcgatgctcaatcaaaacccccttttttaagacgga 27028

                                                                         
Query: 322   atcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagt 381
             ||||||||| ||| || | |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 27027 atcttcctccgggttcccatattcgtcctctgagtcttcctctgagtcttcctctaaagt 26968

                  
Query: 382   accat 386
              ||||
Sbjct: 26967 cccat 26963



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 113/136 (83%)
 Strand = Plus / Minus

                                                                         
Query: 416   ccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
             |||| |||||| ||||||||||| |||||||| |||||||  |||||| ||| |||||||
Sbjct: 26966 ccatgttcgtcctctgagtcttcctctaaagtgccatatttatcctctcggggcctatat 26907

                                                                         
Query: 476   ttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttc 535
             ||| |||||||  |||||||||| || || || || | ||||  |||||||||||||| |
Sbjct: 26906 ttgttctctggactcccatattcgtcctcggattcctcctctcgagtcctatattcgtcc 26847

                             
Query: 536   tctgggttcccatatt 551
             ||| || | |||||||
Sbjct: 26846 tctaggattccatatt 26831



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 73/86 (84%)
 Strand = Plus / Minus

                                                                         
Query: 453   attcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctt 512
             |||| |||||| |||||||||||| | | |||||| |||| ||||| |  ||||||||||
Sbjct: 26728 attcttcctctcgggtcctatattcgttttctgggctcccgtattcgttctctgagtctt 26669

                                       
Query: 513   tctctaaagtcctatattcgttctct 538
             |||||  |||||||||||||| ||||
Sbjct: 26668 tctctcgagtcctatattcgtcctct 26643



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 50/57 (87%), Gaps = 3/57 (5%)
 Strand = Plus / Minus

                                                                      
Query: 596   tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctct 652
             |||||||| |||||||||||||||| |   ||||||| |||||||||||||| ||||
Sbjct: 26855 tattcgtcctctaggattccatattca---tcttctagggtttcatattcgttctct 26802



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                
Query: 362   tctgagtcttcctctaaagtaccatatttttcctc 396
             |||||||||||||||||||| |||||||| |||||
Sbjct: 26954 tctgagtcttcctctaaagtgccatatttatcctc 26920



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 72/87 (82%)
 Strand = Plus / Minus

                                                                         
Query: 489   tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
             |||||| ||| || |||||||||| ||||||||| | |||||  | |||| ||  || ||
Sbjct: 26968 tcccatgttcgtcctctgagtcttcctctaaagtgccatatttatcctctcggggcctat 26909

                                        
Query: 549   atttgttttctgggctcccatattcgt 575
             ||||||| ||||| |||||||||||||
Sbjct: 26908 atttgttctctggactcccatattcgt 26882



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                           
Query: 546   catatttgttttctgggctcccatattcgttttctagggtttcata 591
             |||||| ||| |||||| |||||||||| | |||||||||||||||
Sbjct: 26815 catattcgttctctgggatcccatattcatcttctagggtttcata 26770



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 79/96 (82%), Gaps = 1/96 (1%)
 Strand = Plus / Minus

                                                                         
Query: 626   tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
             ||||||| ||||| | |||| |||||||||||||| |||| ||| ||||  | || | ||
Sbjct: 26744 tcttctagggttttacattcttcctctcgggtcctatatt-cgttttctgggctcccgta 26686

                                                 
Query: 686   ttcctcttctgagtcttccgctcgagtcctatattc 721
             ||| |  |||||||||| | ||||||||||||||||
Sbjct: 26685 ttcgttctctgagtctttctctcgagtcctatattc 26650



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                 
Query: 428   tctgagtcttcttctaaagttccatattcgtcctct 463
             ||||||||||| |||||||| |||| ||||||||||
Sbjct: 26987 tctgagtcttcctctaaagtcccatgttcgtcctct 26952



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 566   ccatattcgttttctagggtttcatattcgt 596
             |||||||| | ||||||||||||||||||||
Sbjct: 26837 ccatattcatcttctagggtttcatattcgt 26807



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 329   tctgggctctcgtattcgtcctctgagtctt 359
             ||||||||| ||||||||| |||||||||||
Sbjct: 26699 tctgggctcccgtattcgttctctgagtctt 26669



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 526   atattcgttctctgggttcccatatt 551
             |||||||||||||||| |||||||||
Sbjct: 26814 atattcgttctctgggatcccatatt 26789



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 547   atatttgttttctgggctcccatattcgtt 576
             ||||| ||||||||||||||| ||||||||
Sbjct: 26709 atattcgttttctgggctcccgtattcgtt 26680



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                         
Query: 410   gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtc 469
             ||||| || |||||||  ||||||||||  |||  ||| | ||||||||||||| |||||
Sbjct: 26696 gggctcccgtattcgttctctgagtctttctctcgagtcctatattcgtcctctagggtc 26637

                   
Query: 470   ctatat 475
             ||||||
Sbjct: 26636 ctatat 26631



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 485   gggttcccatattcctcttctgagtctttctct 517
             |||||||||||||| || |||||||||| ||||
Sbjct: 27017 gggttcccatattcgtcctctgagtcttcctct 26985



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                  
Query: 503   tctgagtctttctctaaagtcctatattcgttctctg 539
             |||||||||| ||||||||||| || ||||| |||||
Sbjct: 26987 tctgagtcttcctctaaagtcccatgttcgtcctctg 26951



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 521   gtcctatattcgttctctgggttcccatatttgttttctg 560
             |||||||||||||| |||||| |||| |||| ||| ||||
Sbjct: 26714 gtcctatattcgttttctgggctcccgtattcgttctctg 26675
to top
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08,
              complete sequence
          Length = 145980

 Score =  389 bits (196), Expect = e-105
 Identities = 318/365 (87%), Gaps = 1/365 (0%)
 Strand = Plus / Minus

                                                                          
Query: 22     ccacctaatatcttatctgcctcttcaggaaaatgaatatctccggaaaatattttgagt 81
              ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| |||
Sbjct: 110699 ccacctaatatcttatccgcctcttcaggaaaatgaatatctccagaaaagatttttagt 110640

                                                                          
Query: 82     tccgtatggcnnnnnnnnctcttcactcggaccagtccgcctagtccacttcttgtattt 141
              ||||||||||        ||||||||||| |||| ||| || || | |||||||||||||
Sbjct: 110639 tccgtatggcttttttttctcttcactcgaaccaatccacccagccgacttcttgtattt 110580

                                                                          
Query: 142    tttgtgagttgtgtatccactccaataatactattgtcaagtatctttagggatgaagat 201
              ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 110579 tttgtgagttgtgtatccactccaataatactattgtcaagtacctttagggatgaggat 110520

                                                                          
Query: 202    ctcggcaagatatgaagttcttgaagaatgnnnnnnnnnccgatctacttctttttggta 261
              |||||||||||||| |||||||| ||||||         |||||||||||||||||||||
Sbjct: 110519 ctcggcaagatatgcagttcttggagaatg-aaaaaaaaccgatctacttctttttggta 110461

                                                                          
Query: 262    ttttagactaaattcttttgttcctcgatgctcaatcaaaccctcnnnnnnnaagatgga 321
              |||||||||||||||||||||||||||||||||||||||| || |       |||| |||
Sbjct: 110460 ttttagactaaattcttttgttcctcgatgctcaatcaaaacccccttttttaagacgga 110401

                                                                          
Query: 322    atcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagt 381
              ||||||||| ||| || | |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 110400 atcttcctccgggttcccatattcgtcctctgagtcttcctctgagtcttcctctaaagt 110341

                   
Query: 382    accat 386
               ||||
Sbjct: 110340 cccat 110336



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 113/136 (83%)
 Strand = Plus / Minus

                                                                          
Query: 416    ccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
              |||| |||||| ||||||||||| |||||||| |||||||  |||||| ||| |||||||
Sbjct: 110339 ccatgttcgtcctctgagtcttcctctaaagtgccatatttatcctctcggggcctatat 110280

                                                                          
Query: 476    ttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttc 535
              ||| |||||||  |||||||||| || || || || | ||||  |||||||||||||| |
Sbjct: 110279 ttgttctctggactcccatattcgtcctcggattcctcctctcgagtcctatattcgtcc 110220

                              
Query: 536    tctgggttcccatatt 551
              ||| || | |||||||
Sbjct: 110219 tctaggattccatatt 110204



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 72/86 (83%)
 Strand = Plus / Minus

                                                                          
Query: 453    attcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctt 512
              |||| |||||| |||||||||||| | | |||||| |||| ||||| |  ||||||||||
Sbjct: 110101 attcttcctctcgggtcctatattcgttttctgggctcccgtattcgttctctgagtctt 110042

                                        
Query: 513    tctctaaagtcctatattcgttctct 538
              |||||   ||||||||||||| ||||
Sbjct: 110041 tctctcgggtcctatattcgtcctct 110016



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 50/57 (87%), Gaps = 3/57 (5%)
 Strand = Plus / Minus

                                                                       
Query: 596    tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctct 652
              |||||||| |||||||||||||||| |   ||||||| |||||||||||||| ||||
Sbjct: 110228 tattcgtcctctaggattccatattca---tcttctagggtttcatattcgttctct 110175



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                 
Query: 362    tctgagtcttcctctaaagtaccatatttttcctc 396
              |||||||||||||||||||| |||||||| |||||
Sbjct: 110327 tctgagtcttcctctaaagtgccatatttatcctc 110293



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 72/87 (82%)
 Strand = Plus / Minus

                                                                          
Query: 489    tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
              |||||| ||| || |||||||||| ||||||||| | |||||  | |||| ||  || ||
Sbjct: 110341 tcccatgttcgtcctctgagtcttcctctaaagtgccatatttatcctctcggggcctat 110282

                                         
Query: 549    atttgttttctgggctcccatattcgt 575
              ||||||| ||||| |||||||||||||
Sbjct: 110281 atttgttctctggactcccatattcgt 110255



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                            
Query: 546    catatttgttttctgggctcccatattcgttttctagggtttcata 591
              |||||| ||| |||||| |||||||||| | |||||||||||||||
Sbjct: 110188 catattcgttctctgggatcccatattcatcttctagggtttcata 110143



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                  
Query: 428    tctgagtcttcttctaaagttccatattcgtcctct 463
              ||||||||||| |||||||| |||| ||||||||||
Sbjct: 110360 tctgagtcttcctctaaagtcccatgttcgtcctct 110325



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                             
Query: 566    ccatattcgttttctagggtttcatattcgt 596
              |||||||| | ||||||||||||||||||||
Sbjct: 110210 ccatattcatcttctagggtttcatattcgt 110180



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                             
Query: 329    tctgggctctcgtattcgtcctctgagtctt 359
              ||||||||| ||||||||| |||||||||||
Sbjct: 110072 tctgggctcccgtattcgttctctgagtctt 110042



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 526    atattcgttctctgggttcccatatt 551
              |||||||||||||||| |||||||||
Sbjct: 110187 atattcgttctctgggatcccatatt 110162



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                       
Query: 626    tcttctanggtttcatattcgtcctctcgggtcctgtattc 666
              ||||||| ||||| | |||| |||||||||||||| |||||
Sbjct: 110117 tcttctagggttttacattcttcctctcgggtcctatattc 110077



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 547    atatttgttttctgggctcccatattcgtt 576
              ||||| ||||||||||||||| ||||||||
Sbjct: 110082 atattcgttttctgggctcccgtattcgtt 110053



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 485    gggttcccatattcctcttctgagtctttctct 517
              |||||||||||||| || |||||||||| ||||
Sbjct: 110390 gggttcccatattcgtcctctgagtcttcctct 110358



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                   
Query: 503    tctgagtctttctctaaagtcctatattcgttctctg 539
              |||||||||| ||||||||||| || ||||| |||||
Sbjct: 110360 tctgagtcttcctctaaagtcccatgttcgtcctctg 110324



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 451    atattcgtcctcttgggtcctatat 475
              ||||||||||||| |||||||||||
Sbjct: 110028 atattcgtcctctagggtcctatat 110004



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                      
Query: 521    gtcctatattcgttctctgggttcccatatttgttttctg 560
              |||||||||||||| |||||| |||| |||| ||| ||||
Sbjct: 110087 gtcctatattcgttttctgggctcccgtattcgttctctg 110048
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score =  389 bits (196), Expect = e-105
 Identities = 318/365 (87%), Gaps = 1/365 (0%)
 Strand = Plus / Minus

                                                                           
Query: 22      ccacctaatatcttatctgcctcttcaggaaaatgaatatctccggaaaatattttgagt 81
               ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| |||
Sbjct: 9256578 ccacctaatatcttatccgcctcttcaggaaaatgaatatctccagaaaagatttttagt 9256519

                                                                           
Query: 82      tccgtatggcnnnnnnnnctcttcactcggaccagtccgcctagtccacttcttgtattt 141
               ||||||||||        ||||||||||| |||| ||| || || | |||||||||||||
Sbjct: 9256518 tccgtatggcttttttttctcttcactcgaaccaatccacccagccgacttcttgtattt 9256459

                                                                           
Query: 142     tttgtgagttgtgtatccactccaataatactattgtcaagtatctttagggatgaagat 201
               ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 9256458 tttgtgagttgtgtatccactccaataatactattgtcaagtacctttagggatgaggat 9256399

                                                                           
Query: 202     ctcggcaagatatgaagttcttgaagaatgnnnnnnnnnccgatctacttctttttggta 261
               |||||||||||||| |||||||| ||||||         |||||||||||||||||||||
Sbjct: 9256398 ctcggcaagatatgcagttcttggagaatg-aaaaaaaaccgatctacttctttttggta 9256340

                                                                           
Query: 262     ttttagactaaattcttttgttcctcgatgctcaatcaaaccctcnnnnnnnaagatgga 321
               |||||||||||||||||||||||||||||||||||||||| || |       |||| |||
Sbjct: 9256339 ttttagactaaattcttttgttcctcgatgctcaatcaaaacccccttttttaagacgga 9256280

                                                                           
Query: 322     atcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagt 381
               ||||||||| ||| || | |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 9256279 atcttcctccgggttcccatattcgtcctctgagtcttcctctgagtcttcctctaaagt 9256220

                    
Query: 382     accat 386
                ||||
Sbjct: 9256219 cccat 9256215



 Score =  389 bits (196), Expect = e-105
 Identities = 318/365 (87%), Gaps = 1/365 (0%)
 Strand = Plus / Minus

                                                                           
Query: 22      ccacctaatatcttatctgcctcttcaggaaaatgaatatctccggaaaatattttgagt 81
               ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| |||
Sbjct: 9152673 ccacctaatatcttatccgcctcttcaggaaaatgaatatctccagaaaagatttttagt 9152614

                                                                           
Query: 82      tccgtatggcnnnnnnnnctcttcactcggaccagtccgcctagtccacttcttgtattt 141
               ||||||||||        ||||||||||| |||| ||| || || | |||||||||||||
Sbjct: 9152613 tccgtatggcttttttttctcttcactcgaaccaatccacccagccgacttcttgtattt 9152554

                                                                           
Query: 142     tttgtgagttgtgtatccactccaataatactattgtcaagtatctttagggatgaagat 201
               ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 9152553 tttgtgagttgtgtatccactccaataatactattgtcaagtacctttagggatgaggat 9152494

                                                                           
Query: 202     ctcggcaagatatgaagttcttgaagaatgnnnnnnnnnccgatctacttctttttggta 261
               |||||||||||||| |||||||| ||||||         |||||||||||||||||||||
Sbjct: 9152493 ctcggcaagatatgcagttcttggagaatg-aaaaaaaaccgatctacttctttttggta 9152435

                                                                           
Query: 262     ttttagactaaattcttttgttcctcgatgctcaatcaaaccctcnnnnnnnaagatgga 321
               |||||||||||||||||||||||||||||||||||||||| || |       |||| |||
Sbjct: 9152434 ttttagactaaattcttttgttcctcgatgctcaatcaaaacccccttttttaagacgga 9152375

                                                                           
Query: 322     atcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagt 381
               ||||||||| ||| || | |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 9152374 atcttcctccgggttcccatattcgtcctctgagtcttcctctgagtcttcctctaaagt 9152315

                    
Query: 382     accat 386
                ||||
Sbjct: 9152314 cccat 9152310



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 113/136 (83%)
 Strand = Plus / Minus

                                                                           
Query: 416     ccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
               |||| |||||| ||||||||||| |||||||| |||||||  |||||| ||| |||||||
Sbjct: 9256218 ccatgttcgtcctctgagtcttcctctaaagtgccatatttatcctctcggggcctatat 9256159

                                                                           
Query: 476     ttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttc 535
               ||| |||||||  |||||||||| || || || || | ||||  |||||||||||||| |
Sbjct: 9256158 ttgttctctggactcccatattcgtcctcggattcctcctctcgagtcctatattcgtcc 9256099

                               
Query: 536     tctgggttcccatatt 551
               ||| || | |||||||
Sbjct: 9256098 tctaggattccatatt 9256083



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 113/136 (83%)
 Strand = Plus / Minus

                                                                           
Query: 416     ccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
               |||| |||||| ||||||||||| |||||||| |||||||  |||||| ||| |||||||
Sbjct: 9152313 ccatgttcgtcctctgagtcttcctctaaagtgccatatttatcctctcggggcctatat 9152254

                                                                           
Query: 476     ttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttc 535
               ||| |||||||  |||||||||| || || || || | ||||  |||||||||||||| |
Sbjct: 9152253 ttgttctctggactcccatattcgtcctcggattcctcctctcgagtcctatattcgtcc 9152194

                               
Query: 536     tctgggttcccatatt 551
               ||| || | |||||||
Sbjct: 9152193 tctaggattccatatt 9152178



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 72/86 (83%)
 Strand = Plus / Minus

                                                                           
Query: 453     attcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctt 512
               |||| |||||| |||||||||||| | | |||||| |||| ||||| |  ||||||||||
Sbjct: 9255980 attcttcctctcgggtcctatattcgttttctgggctcccgtattcgttctctgagtctt 9255921

                                         
Query: 513     tctctaaagtcctatattcgttctct 538
               |||||   ||||||||||||| ||||
Sbjct: 9255920 tctctcgggtcctatattcgtcctct 9255895



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 72/86 (83%)
 Strand = Plus / Minus

                                                                           
Query: 453     attcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctt 512
               |||| |||||| |||||||||||| | | |||||| |||| ||||| |  ||||||||||
Sbjct: 9152075 attcttcctctcgggtcctatattcgttttctgggctcccgtattcgttctctgagtctt 9152016

                                         
Query: 513     tctctaaagtcctatattcgttctct 538
               |||||   ||||||||||||| ||||
Sbjct: 9152015 tctctcgggtcctatattcgtcctct 9151990



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 50/57 (87%), Gaps = 3/57 (5%)
 Strand = Plus / Plus

                                                                         
Query: 596      tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctct 652
                |||||||| |||||||||||||||| |   ||||||| |||||||||||||| ||||
Sbjct: 34340527 tattcgtcctctaggattccatattca---tcttctagggtttcatattcgttctct 34340580



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 50/57 (87%), Gaps = 3/57 (5%)
 Strand = Plus / Minus

                                                                        
Query: 596     tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctct 652
               |||||||| |||||||||||||||| |   ||||||| |||||||||||||| ||||
Sbjct: 9256107 tattcgtcctctaggattccatattca---tcttctagggtttcatattcgttctct 9256054



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 50/57 (87%), Gaps = 3/57 (5%)
 Strand = Plus / Minus

                                                                        
Query: 596     tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctct 652
               |||||||| |||||||||||||||| |   ||||||| |||||||||||||| ||||
Sbjct: 9152202 tattcgtcctctaggattccatattca---tcttctagggtttcatattcgttctct 9152149



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                  
Query: 362     tctgagtcttcctctaaagtaccatatttttcctc 396
               |||||||||||||||||||| |||||||| |||||
Sbjct: 9256206 tctgagtcttcctctaaagtgccatatttatcctc 9256172



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 72/87 (82%)
 Strand = Plus / Minus

                                                                           
Query: 489     tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
               |||||| ||| || |||||||||| ||||||||| | |||||  | |||| ||  || ||
Sbjct: 9256220 tcccatgttcgtcctctgagtcttcctctaaagtgccatatttatcctctcggggcctat 9256161

                                          
Query: 549     atttgttttctgggctcccatattcgt 575
               ||||||| ||||| |||||||||||||
Sbjct: 9256160 atttgttctctggactcccatattcgt 9256134



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                  
Query: 362     tctgagtcttcctctaaagtaccatatttttcctc 396
               |||||||||||||||||||| |||||||| |||||
Sbjct: 9152301 tctgagtcttcctctaaagtgccatatttatcctc 9152267



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 72/87 (82%)
 Strand = Plus / Minus

                                                                           
Query: 489     tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
               |||||| ||| || |||||||||| ||||||||| | |||||  | |||| ||  || ||
Sbjct: 9152315 tcccatgttcgtcctctgagtcttcctctaaagtgccatatttatcctctcggggcctat 9152256

                                          
Query: 549     atttgttttctgggctcccatattcgt 575
               ||||||| ||||| |||||||||||||
Sbjct: 9152255 atttgttctctggactcccatattcgt 9152229



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                              
Query: 546      catatttgttttctgggctcccatattcgttttctagggtttcata 591
                |||||| ||| |||||  |||||||||| |||||||||||||||||
Sbjct: 34340567 catattcgttctctggaatcccatattcattttctagggtttcata 34340612



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                             
Query: 546     catatttgttttctgggctcccatattcgttttctagggtttcata 591
               |||||| ||| |||||| |||||||||| | |||||||||||||||
Sbjct: 9256067 catattcgttctctgggatcccatattcatcttctagggtttcata 9256022



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                             
Query: 546     catatttgttttctgggctcccatattcgttttctagggtttcata 591
               |||||| ||| |||||| |||||||||| | |||||||||||||||
Sbjct: 9152162 catattcgttctctgggatcccatattcatcttctagggtttcata 9152117



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                   
Query: 428     tctgagtcttcttctaaagttccatattcgtcctct 463
               ||||||||||| |||||||| |||| ||||||||||
Sbjct: 9256239 tctgagtcttcctctaaagtcccatgttcgtcctct 9256204



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                   
Query: 428     tctgagtcttcttctaaagttccatattcgtcctct 463
               ||||||||||| |||||||| |||| ||||||||||
Sbjct: 9152334 tctgagtcttcctctaaagtcccatgttcgtcctct 9152299



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 566      ccatattcgttttctagggtttcatattcgt 596
                |||||||| | ||||||||||||||||||||
Sbjct: 34340545 ccatattcatcttctagggtttcatattcgt 34340575



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                              
Query: 566     ccatattcgttttctagggtttcatattcgt 596
               |||||||| | ||||||||||||||||||||
Sbjct: 9256089 ccatattcatcttctagggtttcatattcgt 9256059



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                              
Query: 329     tctgggctctcgtattcgtcctctgagtctt 359
               ||||||||| ||||||||| |||||||||||
Sbjct: 9255951 tctgggctcccgtattcgttctctgagtctt 9255921



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                              
Query: 566     ccatattcgttttctagggtttcatattcgt 596
               |||||||| | ||||||||||||||||||||
Sbjct: 9152184 ccatattcatcttctagggtttcatattcgt 9152154



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                              
Query: 329     tctgggctctcgtattcgtcctctgagtctt 359
               ||||||||| ||||||||| |||||||||||
Sbjct: 9152046 tctgggctcccgtattcgttctctgagtctt 9152016



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                         
Query: 626      tcttctanggtttcatattcgtcctctcgggtcctgtattc 666
                ||||||| ||||| | |||| |||||||||||||| |||||
Sbjct: 19171551 tcttctagggttttacattcttcctctcgggtcctatattc 19171591



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 526     atattcgttctctgggttcccatatt 551
               |||||||||||||||| |||||||||
Sbjct: 9256066 atattcgttctctgggatcccatatt 9256041



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                        
Query: 626     tcttctanggtttcatattcgtcctctcgggtcctgtattc 666
               ||||||| ||||| | |||| |||||||||||||| |||||
Sbjct: 9255996 tcttctagggttttacattcttcctctcgggtcctatattc 9255956



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 547     atatttgttttctgggctcccatattcgtt 576
               ||||| ||||||||||||||| ||||||||
Sbjct: 9255961 atattcgttttctgggctcccgtattcgtt 9255932



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 526     atattcgttctctgggttcccatatt 551
               |||||||||||||||| |||||||||
Sbjct: 9152161 atattcgttctctgggatcccatatt 9152136



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                        
Query: 626     tcttctanggtttcatattcgtcctctcgggtcctgtattc 666
               ||||||| ||||| | |||| |||||||||||||| |||||
Sbjct: 9152091 tcttctagggttttacattcttcctctcgggtcctatattc 9152051



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 547     atatttgttttctgggctcccatattcgtt 576
               ||||| ||||||||||||||| ||||||||
Sbjct: 9152056 atattcgttttctgggctcccgtattcgtt 9152027



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 451      atattcgtcctcttgggtcctatat 475
                ||||||||||||| |||||||||||
Sbjct: 19171640 atattcgtcctctagggtcctatat 19171664



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                
Query: 485     gggttcccatattcctcttctgagtctttctct 517
               |||||||||||||| || |||||||||| ||||
Sbjct: 9256269 gggttcccatattcgtcctctgagtcttcctct 9256237



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                    
Query: 503     tctgagtctttctctaaagtcctatattcgttctctg 539
               |||||||||| ||||||||||| || ||||| |||||
Sbjct: 9256239 tctgagtcttcctctaaagtcccatgttcgtcctctg 9256203



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 451     atattcgtcctcttgggtcctatat 475
               ||||||||||||| |||||||||||
Sbjct: 9255907 atattcgtcctctagggtcctatat 9255883



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                
Query: 485     gggttcccatattcctcttctgagtctttctct 517
               |||||||||||||| || |||||||||| ||||
Sbjct: 9152364 gggttcccatattcgtcctctgagtcttcctct 9152332



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                    
Query: 503     tctgagtctttctctaaagtcctatattcgttctctg 539
               |||||||||| ||||||||||| || ||||| |||||
Sbjct: 9152334 tctgagtcttcctctaaagtcccatgttcgtcctctg 9152298



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 451     atattcgtcctcttgggtcctatat 475
               ||||||||||||| |||||||||||
Sbjct: 9152002 atattcgtcctctagggtcctatat 9151978



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                       
Query: 521     gtcctatattcgttctctgggttcccatatttgttttctg 560
               |||||||||||||| |||||| |||| |||| ||| ||||
Sbjct: 9255966 gtcctatattcgttttctgggctcccgtattcgttctctg 9255927



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                       
Query: 521     gtcctatattcgttctctgggttcccatatttgttttctg 560
               |||||||||||||| |||||| |||| |||| ||| ||||
Sbjct: 9152061 gtcctatattcgttttctgggctcccgtattcgttctctg 9152022
to top
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome
          Length = 134494

 Score =  389 bits (196), Expect = e-105
 Identities = 318/365 (87%), Gaps = 1/365 (0%)
 Strand = Plus / Minus

                                                                         
Query: 22    ccacctaatatcttatctgcctcttcaggaaaatgaatatctccggaaaatattttgagt 81
             ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| |||
Sbjct: 27260 ccacctaatatcttatccgcctcttcaggaaaatgaatatctccagaaaagatttttagt 27201

                                                                         
Query: 82    tccgtatggcnnnnnnnnctcttcactcggaccagtccgcctagtccacttcttgtattt 141
             ||||||||||        ||||||||||| |||| ||| || || | |||||||||||||
Sbjct: 27200 tccgtatggcttttttttctcttcactcgaaccaatccacccagccgacttcttgtattt 27141

                                                                         
Query: 142   tttgtgagttgtgtatccactccaataatactattgtcaagtatctttagggatgaagat 201
             ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 27140 tttgtgagttgtgtatccactccaataatactattgtcaagtacctttagggatgaggat 27081

                                                                         
Query: 202   ctcggcaagatatgaagttcttgaagaatgnnnnnnnnnccgatctacttctttttggta 261
             |||||||||||||| |||||||| ||||||         |||||||||||||||||||||
Sbjct: 27080 ctcggcaagatatgcagttcttggagaatg-aaaaaaaaccgatctacttctttttggta 27022

                                                                         
Query: 262   ttttagactaaattcttttgttcctcgatgctcaatcaaaccctcnnnnnnnaagatgga 321
             |||||||||||||||||||||||||||||||||||||||| || |       |||| |||
Sbjct: 27021 ttttagactaaattcttttgttcctcgatgctcaatcaaaacccccttttttaagacgga 26962

                                                                         
Query: 322   atcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagt 381
             ||||||||| ||| || | |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 26961 atcttcctccgggttcccatattcgtcctctgagtcttcctctgagtcttcctctaaagt 26902

                  
Query: 382   accat 386
              ||||
Sbjct: 26901 cccat 26897



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 113/136 (83%)
 Strand = Plus / Minus

                                                                         
Query: 416   ccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
             |||| |||||| ||||||||||| |||||||| |||||||  |||||| ||| |||||||
Sbjct: 26900 ccatgttcgtcctctgagtcttcctctaaagtgccatatttatcctctcggggcctatat 26841

                                                                         
Query: 476   ttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttc 535
             ||| |||||||  |||||||||| || || || || | ||||  |||||||||||||| |
Sbjct: 26840 ttgttctctggactcccatattcgtcctcggattcctcctctcgagtcctatattcgtcc 26781

                             
Query: 536   tctgggttcccatatt 551
             ||| || | |||||||
Sbjct: 26780 tctaggattccatatt 26765



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 73/86 (84%)
 Strand = Plus / Minus

                                                                         
Query: 453   attcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctt 512
             |||| |||||| |||||||||||| | | |||||| |||| ||||| |  ||||||||||
Sbjct: 26662 attcttcctctcgggtcctatattcgttttctgggctcccgtattcgttctctgagtctt 26603

                                       
Query: 513   tctctaaagtcctatattcgttctct 538
             |||||  |||||||||||||| ||||
Sbjct: 26602 tctctcgagtcctatattcgtcctct 26577



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 50/57 (87%), Gaps = 3/57 (5%)
 Strand = Plus / Minus

                                                                      
Query: 596   tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctct 652
             |||||||| |||||||||||||||| |   ||||||| |||||||||||||| ||||
Sbjct: 26789 tattcgtcctctaggattccatattca---tcttctagggtttcatattcgttctct 26736



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                
Query: 362   tctgagtcttcctctaaagtaccatatttttcctc 396
             |||||||||||||||||||| |||||||| |||||
Sbjct: 26888 tctgagtcttcctctaaagtgccatatttatcctc 26854



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 72/87 (82%)
 Strand = Plus / Minus

                                                                         
Query: 489   tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
             |||||| ||| || |||||||||| ||||||||| | |||||  | |||| ||  || ||
Sbjct: 26902 tcccatgttcgtcctctgagtcttcctctaaagtgccatatttatcctctcggggcctat 26843

                                        
Query: 549   atttgttttctgggctcccatattcgt 575
             ||||||| ||||| |||||||||||||
Sbjct: 26842 atttgttctctggactcccatattcgt 26816



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                           
Query: 546   catatttgttttctgggctcccatattcgttttctagggtttcata 591
             |||||| ||| |||||| |||||||||| | |||||||||||||||
Sbjct: 26749 catattcgttctctgggatcccatattcatcttctagggtttcata 26704



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 79/96 (82%), Gaps = 1/96 (1%)
 Strand = Plus / Minus

                                                                         
Query: 626   tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
             ||||||| ||||| | |||| |||||||||||||| |||| ||| ||||  | || | ||
Sbjct: 26678 tcttctagggttttacattcttcctctcgggtcctatatt-cgttttctgggctcccgta 26620

                                                 
Query: 686   ttcctcttctgagtcttccgctcgagtcctatattc 721
             ||| |  |||||||||| | ||||||||||||||||
Sbjct: 26619 ttcgttctctgagtctttctctcgagtcctatattc 26584



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                 
Query: 428   tctgagtcttcttctaaagttccatattcgtcctct 463
             ||||||||||| |||||||| |||| ||||||||||
Sbjct: 26921 tctgagtcttcctctaaagtcccatgttcgtcctct 26886



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 566   ccatattcgttttctagggtttcatattcgt 596
             |||||||| | ||||||||||||||||||||
Sbjct: 26771 ccatattcatcttctagggtttcatattcgt 26741



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 329   tctgggctctcgtattcgtcctctgagtctt 359
             ||||||||| ||||||||| |||||||||||
Sbjct: 26633 tctgggctcccgtattcgttctctgagtctt 26603



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 526   atattcgttctctgggttcccatatt 551
             |||||||||||||||| |||||||||
Sbjct: 26748 atattcgttctctgggatcccatatt 26723



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 547   atatttgttttctgggctcccatattcgtt 576
             ||||| ||||||||||||||| ||||||||
Sbjct: 26643 atattcgttttctgggctcccgtattcgtt 26614



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                         
Query: 410   gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtc 469
             ||||| || |||||||  ||||||||||  |||  ||| | ||||||||||||| |||||
Sbjct: 26630 gggctcccgtattcgttctctgagtctttctctcgagtcctatattcgtcctctagggtc 26571

                   
Query: 470   ctatat 475
             ||||||
Sbjct: 26570 ctatat 26565



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 485   gggttcccatattcctcttctgagtctttctct 517
             |||||||||||||| || |||||||||| ||||
Sbjct: 26951 gggttcccatattcgtcctctgagtcttcctct 26919



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                  
Query: 503   tctgagtctttctctaaagtcctatattcgttctctg 539
             |||||||||| ||||||||||| || ||||| |||||
Sbjct: 26921 tctgagtcttcctctaaagtcccatgttcgtcctctg 26885



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 521   gtcctatattcgttctctgggttcccatatttgttttctg 560
             |||||||||||||| |||||| |||| |||| ||| ||||
Sbjct: 26648 gtcctatattcgttttctgggctcccgtattcgttctctg 26609
to top
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAb0075K12, complete sequence
          Length = 125936

 Score =  381 bits (192), Expect = e-102
 Identities = 317/365 (86%), Gaps = 1/365 (0%)
 Strand = Plus / Minus

                                                                         
Query: 22    ccacctaatatcttatctgcctcttcaggaaaatgaatatctccggaaaatattttgagt 81
             ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| |||
Sbjct: 25542 ccacctaatatcttatccgcctcttcaggaaaatgaatatctccagaaaagatttttagt 25483

                                                                         
Query: 82    tccgtatggcnnnnnnnnctcttcactcggaccagtccgcctagtccacttcttgtattt 141
             ||||||||||        ||||||||||| |||| ||| || || | |||||||||||||
Sbjct: 25482 tccgtatggcttttttttctcttcactcgaaccaatccacccagccgacttcttgtattt 25423

                                                                         
Query: 142   tttgtgagttgtgtatccactccaataatactattgtcaagtatctttagggatgaagat 201
             ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 25422 tttgtgagttgtgtatccactccaataatactattgtcaagtacctttagggatgaggat 25363

                                                                         
Query: 202   ctcggcaagatatgaagttcttgaagaatgnnnnnnnnnccgatctacttctttttggta 261
             |||||||||||||| |||||||| ||||||         |||||||||||||||||||||
Sbjct: 25362 ctcggcaagatatgcagttcttggagaatg-aaaaaaaaccgatctacttctttttggta 25304

                                                                         
Query: 262   ttttagactaaattcttttgttcctcgatgctcaatcaaaccctcnnnnnnnaagatgga 321
             |||||||||||||||||||||||||||||||||||||||| || |       |||| |||
Sbjct: 25303 ttttagactaaattcttttgttcctcgatgctcaatcaaaacccccttttttaagacgga 25244

                                                                         
Query: 322   atcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagt 381
             ||||||| | ||| || | |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 25243 atcttcccccgggttcccatattcgtcctctgagtcttcctctgagtcttcctctaaagt 25184

                  
Query: 382   accat 386
              ||||
Sbjct: 25183 cccat 25179



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 103/124 (83%)
 Strand = Plus / Minus

                                                                         
Query: 428   tctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatttgctctctggg 487
             ||||||||||| |||||||| |||||||  |||||| ||| |||||||||| ||||||| 
Sbjct: 25170 tctgagtcttcctctaaagtgccatatttatcctctcggggcctatatttgttctctgga 25111

                                                                         
Query: 488   ttcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttccca 547
              |||||||||| || || || || | ||||  |||||||||||||| |||| || | |||
Sbjct: 25110 ctcccatattcgtcctcggattcctcctctcgagtcctatattcgtcctctaggattcca 25051

                 
Query: 548   tatt 551
             ||||
Sbjct: 25050 tatt 25047



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 73/86 (84%)
 Strand = Plus / Minus

                                                                         
Query: 453   attcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctt 512
             |||| |||||| |||||||||||| | | |||||| |||| ||||| |  ||||||||||
Sbjct: 24944 attcttcctctcgggtcctatattcgttttctgggctcccgtattcgttctctgagtctt 24885

                                       
Query: 513   tctctaaagtcctatattcgttctct 538
             |||||  |||||||||||||| ||||
Sbjct: 24884 tctctcgagtcctatattcgtcctct 24859



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 50/57 (87%), Gaps = 3/57 (5%)
 Strand = Plus / Minus

                                                                      
Query: 596   tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctct 652
             |||||||| |||||||||||||||| |   ||||||| |||||||||||||| ||||
Sbjct: 25071 tattcgtcctctaggattccatattca---tcttctagggtttcatattcgttctct 25018



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                
Query: 362   tctgagtcttcctctaaagtaccatatttttcctc 396
             |||||||||||||||||||| |||||||| |||||
Sbjct: 25170 tctgagtcttcctctaaagtgccatatttatcctc 25136



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                           
Query: 546   catatttgttttctgggctcccatattcgttttctagggtttcata 591
             |||||| ||| |||||| |||||||||| | |||||||||||||||
Sbjct: 25031 catattcgttctctgggatcccatattcatcttctagggtttcata 24986



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 79/96 (82%), Gaps = 1/96 (1%)
 Strand = Plus / Minus

                                                                         
Query: 626   tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
             ||||||| ||||| | |||| |||||||||||||| |||| ||| ||||  | || | ||
Sbjct: 24960 tcttctagggttttacattcttcctctcgggtcctatatt-cgttttctgggctcccgta 24902

                                                 
Query: 686   ttcctcttctgagtcttccgctcgagtcctatattc 721
             ||| |  |||||||||| | ||||||||||||||||
Sbjct: 24901 ttcgttctctgagtctttctctcgagtcctatattc 24866



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 61/73 (83%)
 Strand = Plus / Minus

                                                                         
Query: 503   tctgagtctttctctaaagtcctatattcgttctctgggttcccatatttgttttctggg 562
             |||||||||| ||||||||| | |||||  | |||| ||  || ||||||||| ||||| 
Sbjct: 25170 tctgagtcttcctctaaagtgccatatttatcctctcggggcctatatttgttctctgga 25111

                          
Query: 563   ctcccatattcgt 575
             |||||||||||||
Sbjct: 25110 ctcccatattcgt 25098



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 566   ccatattcgttttctagggtttcatattcgt 596
             |||||||| | ||||||||||||||||||||
Sbjct: 25053 ccatattcatcttctagggtttcatattcgt 25023



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 329   tctgggctctcgtattcgtcctctgagtctt 359
             ||||||||| ||||||||| |||||||||||
Sbjct: 24915 tctgggctcccgtattcgttctctgagtctt 24885



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 526   atattcgttctctgggttcccatatt 551
             |||||||||||||||| |||||||||
Sbjct: 25030 atattcgttctctgggatcccatatt 25005



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 547   atatttgttttctgggctcccatattcgtt 576
             ||||| ||||||||||||||| ||||||||
Sbjct: 24925 atattcgttttctgggctcccgtattcgtt 24896



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                         
Query: 410   gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtc 469
             ||||| || |||||||  ||||||||||  |||  ||| | ||||||||||||| |||||
Sbjct: 24912 gggctcccgtattcgttctctgagtctttctctcgagtcctatattcgtcctctagggtc 24853

                   
Query: 470   ctatat 475
             ||||||
Sbjct: 24852 ctatat 24847



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 485   gggttcccatattcctcttctgagtctttctct 517
             |||||||||||||| || |||||||||| ||||
Sbjct: 25233 gggttcccatattcgtcctctgagtcttcctct 25201



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 403   ttccccggggctgccatattcgtcttctgagtcttc 438
             |||||| ||| | ||||||||||| |||||||||||
Sbjct: 25240 ttcccccgggttcccatattcgtcctctgagtcttc 25205



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 428   tctgagtcttcttctaaagttccatattcgtcctct 463
             ||||||||||| |||||||| |||| |||| |||||
Sbjct: 25203 tctgagtcttcctctaaagtcccatgttcgacctct 25168



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 521   gtcctatattcgttctctgggttcccatatttgttttctg 560
             |||||||||||||| |||||| |||| |||| ||| ||||
Sbjct: 24930 gtcctatattcgttttctgggctcccgtattcgttctctg 24891
to top
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from
              chromosome 10, complete sequence
          Length = 134933

 Score =  381 bits (192), Expect = e-102
 Identities = 317/365 (86%), Gaps = 1/365 (0%)
 Strand = Plus / Minus

                                                                          
Query: 22     ccacctaatatcttatctgcctcttcaggaaaatgaatatctccggaaaatattttgagt 81
              ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| |||
Sbjct: 100475 ccacctaatatcttatccgcctcttcaggaaaatgaatatctccagaaaagatttttagt 100416

                                                                          
Query: 82     tccgtatggcnnnnnnnnctcttcactcggaccagtccgcctagtccacttcttgtattt 141
              ||||||||||        ||||||||||| |||| ||| || || | |||||||||||||
Sbjct: 100415 tccgtatggcttttttttctcttcactcgaaccaatccacccagccgacttcttgtattt 100356

                                                                          
Query: 142    tttgtgagttgtgtatccactccaataatactattgtcaagtatctttagggatgaagat 201
              ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 100355 tttgtgagttgtgtatccactccaataatactattgtcaagtacctttagggatgaggat 100296

                                                                          
Query: 202    ctcggcaagatatgaagttcttgaagaatgnnnnnnnnnccgatctacttctttttggta 261
              |||||||||||||| |||||||| ||||||         |||||||||||||||||||||
Sbjct: 100295 ctcggcaagatatgcagttcttggagaatg-aaaaaaaaccgatctacttctttttggta 100237

                                                                          
Query: 262    ttttagactaaattcttttgttcctcgatgctcaatcaaaccctcnnnnnnnaagatgga 321
              |||||||||||||||||||||||||||||||||||||||| || |       |||| |||
Sbjct: 100236 ttttagactaaattcttttgttcctcgatgctcaatcaaaacccccttttttaagacgga 100177

                                                                          
Query: 322    atcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagt 381
              ||||||| | ||| || | |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 100176 atcttcccccgggttcccatattcgtcctctgagtcttcctctgagtcttcctctaaagt 100117

                   
Query: 382    accat 386
               ||||
Sbjct: 100116 cccat 100112



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 103/124 (83%)
 Strand = Plus / Minus

                                                                          
Query: 428    tctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatttgctctctggg 487
              ||||||||||| |||||||| |||||||  |||||| ||| |||||||||| ||||||| 
Sbjct: 100103 tctgagtcttcctctaaagtgccatatttatcctctcggggcctatatttgttctctgga 100044

                                                                          
Query: 488    ttcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttccca 547
               |||||||||| || || || || | ||||  |||||||||||||| |||| || | |||
Sbjct: 100043 ctcccatattcgtcctcggattcctcctctcgagtcctatattcgtcctctaggattcca 99984

                  
Query: 548    tatt 551
              ||||
Sbjct: 99983  tatt 99980



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 73/86 (84%)
 Strand = Plus / Minus

                                                                         
Query: 453   attcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctt 512
             |||| |||||| |||||||||||| | | |||||| |||| ||||| |  ||||||||||
Sbjct: 99877 attcttcctctcgggtcctatattcgttttctgggctcccgtattcgttctctgagtctt 99818

                                       
Query: 513   tctctaaagtcctatattcgttctct 538
             |||||  |||||||||||||| ||||
Sbjct: 99817 tctctcgagtcctatattcgtcctct 99792



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 50/57 (87%), Gaps = 3/57 (5%)
 Strand = Plus / Minus

                                                                       
Query: 596    tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctct 652
              |||||||| |||||||||||||||| |   ||||||| |||||||||||||| ||||
Sbjct: 100004 tattcgtcctctaggattccatattca---tcttctagggtttcatattcgttctct 99951



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                 
Query: 362    tctgagtcttcctctaaagtaccatatttttcctc 396
              |||||||||||||||||||| |||||||| |||||
Sbjct: 100103 tctgagtcttcctctaaagtgccatatttatcctc 100069



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                           
Query: 546   catatttgttttctgggctcccatattcgttttctagggtttcata 591
             |||||| ||| |||||| |||||||||| | |||||||||||||||
Sbjct: 99964 catattcgttctctgggatcccatattcatcttctagggtttcata 99919



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 79/96 (82%), Gaps = 1/96 (1%)
 Strand = Plus / Minus

                                                                         
Query: 626   tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
             ||||||| ||||| | |||| |||||||||||||| |||| ||| ||||  | || | ||
Sbjct: 99893 tcttctagggttttacattcttcctctcgggtcctatatt-cgttttctgggctcccgta 99835

                                                 
Query: 686   ttcctcttctgagtcttccgctcgagtcctatattc 721
             ||| |  |||||||||| | ||||||||||||||||
Sbjct: 99834 ttcgttctctgagtctttctctcgagtcctatattc 99799



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 61/73 (83%)
 Strand = Plus / Minus

                                                                          
Query: 503    tctgagtctttctctaaagtcctatattcgttctctgggttcccatatttgttttctggg 562
              |||||||||| ||||||||| | |||||  | |||| ||  || ||||||||| ||||| 
Sbjct: 100103 tctgagtcttcctctaaagtgccatatttatcctctcggggcctatatttgttctctgga 100044

                           
Query: 563    ctcccatattcgt 575
              |||||||||||||
Sbjct: 100043 ctcccatattcgt 100031



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 566   ccatattcgttttctagggtttcatattcgt 596
             |||||||| | ||||||||||||||||||||
Sbjct: 99986 ccatattcatcttctagggtttcatattcgt 99956



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 329   tctgggctctcgtattcgtcctctgagtctt 359
             ||||||||| ||||||||| |||||||||||
Sbjct: 99848 tctgggctcccgtattcgttctctgagtctt 99818



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 526   atattcgttctctgggttcccatatt 551
             |||||||||||||||| |||||||||
Sbjct: 99963 atattcgttctctgggatcccatatt 99938



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 547   atatttgttttctgggctcccatattcgtt 576
             ||||| ||||||||||||||| ||||||||
Sbjct: 99858 atattcgttttctgggctcccgtattcgtt 99829



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                         
Query: 410   gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtc 469
             ||||| || |||||||  ||||||||||  |||  ||| | ||||||||||||| |||||
Sbjct: 99845 gggctcccgtattcgttctctgagtctttctctcgagtcctatattcgtcctctagggtc 99786

                   
Query: 470   ctatat 475
             ||||||
Sbjct: 99785 ctatat 99780



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 485    gggttcccatattcctcttctgagtctttctct 517
              |||||||||||||| || |||||||||| ||||
Sbjct: 100166 gggttcccatattcgtcctctgagtcttcctct 100134



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                  
Query: 403    ttccccggggctgccatattcgtcttctgagtcttc 438
              |||||| ||| | ||||||||||| |||||||||||
Sbjct: 100173 ttcccccgggttcccatattcgtcctctgagtcttc 100138



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                  
Query: 428    tctgagtcttcttctaaagttccatattcgtcctct 463
              ||||||||||| |||||||| |||| |||| |||||
Sbjct: 100136 tctgagtcttcctctaaagtcccatgttcgacctct 100101



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 521   gtcctatattcgttctctgggttcccatatttgttttctg 560
             |||||||||||||| |||||| |||| |||| ||| ||||
Sbjct: 99863 gtcctatattcgttttctgggctcccgtattcgttctctg 99824
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  381 bits (192), Expect = e-102
 Identities = 317/365 (86%), Gaps = 1/365 (0%)
 Strand = Plus / Minus

                                                                            
Query: 22       ccacctaatatcttatctgcctcttcaggaaaatgaatatctccggaaaatattttgagt 81
                ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| |||
Sbjct: 10319150 ccacctaatatcttatccgcctcttcaggaaaatgaatatctccagaaaagatttttagt 10319091

                                                                            
Query: 82       tccgtatggcnnnnnnnnctcttcactcggaccagtccgcctagtccacttcttgtattt 141
                ||||||||||        ||||||||||| |||| ||| || || | |||||||||||||
Sbjct: 10319090 tccgtatggcttttttttctcttcactcgaaccaatccacccagccgacttcttgtattt 10319031

                                                                            
Query: 142      tttgtgagttgtgtatccactccaataatactattgtcaagtatctttagggatgaagat 201
                ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 10319030 tttgtgagttgtgtatccactccaataatactattgtcaagtacctttagggatgaggat 10318971

                                                                            
Query: 202      ctcggcaagatatgaagttcttgaagaatgnnnnnnnnnccgatctacttctttttggta 261
                |||||||||||||| |||||||| ||||||         |||||||||||||||||||||
Sbjct: 10318970 ctcggcaagatatgcagttcttggagaatg-aaaaaaaaccgatctacttctttttggta 10318912

                                                                            
Query: 262      ttttagactaaattcttttgttcctcgatgctcaatcaaaccctcnnnnnnnaagatgga 321
                |||||||||||||||||||||||||||||||||||||||| || |       |||| |||
Sbjct: 10318911 ttttagactaaattcttttgttcctcgatgctcaatcaaaacccccttttttaagacgga 10318852

                                                                            
Query: 322      atcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagt 381
                ||||||| | ||| || | |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 10318851 atcttcccccgggttcccatattcgtcctctgagtcttcctctgagtcttcctctaaagt 10318792

                     
Query: 382      accat 386
                 ||||
Sbjct: 10318791 cccat 10318787



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 103/124 (83%)
 Strand = Plus / Minus

                                                                            
Query: 428      tctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatttgctctctggg 487
                ||||||||||| |||||||| |||||||  |||||| ||| |||||||||| ||||||| 
Sbjct: 10318778 tctgagtcttcctctaaagtgccatatttatcctctcggggcctatatttgttctctgga 10318719

                                                                            
Query: 488      ttcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttccca 547
                 |||||||||| || || || || | ||||  |||||||||||||| |||| || | |||
Sbjct: 10318718 ctcccatattcgtcctcggattcctcctctcgagtcctatattcgtcctctaggattcca 10318659

                    
Query: 548      tatt 551
                ||||
Sbjct: 10318658 tatt 10318655



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 73/86 (84%)
 Strand = Plus / Minus

                                                                            
Query: 453      attcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctt 512
                |||| |||||| |||||||||||| | | |||||| |||| ||||| |  ||||||||||
Sbjct: 10318552 attcttcctctcgggtcctatattcgttttctgggctcccgtattcgttctctgagtctt 10318493

                                          
Query: 513      tctctaaagtcctatattcgttctct 538
                |||||  |||||||||||||| ||||
Sbjct: 10318492 tctctcgagtcctatattcgtcctct 10318467



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 50/57 (87%), Gaps = 3/57 (5%)
 Strand = Plus / Minus

                                                                         
Query: 596      tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctct 652
                |||||||| |||||||||||||||| |   ||||||| |||||||||||||| ||||
Sbjct: 10318679 tattcgtcctctaggattccatattca---tcttctagggtttcatattcgttctct 10318626



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                   
Query: 362      tctgagtcttcctctaaagtaccatatttttcctc 396
                |||||||||||||||||||| |||||||| |||||
Sbjct: 10318778 tctgagtcttcctctaaagtgccatatttatcctc 10318744



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                              
Query: 546      catatttgttttctgggctcccatattcgttttctagggtttcata 591
                |||||| ||| |||||| |||||||||| | |||||||||||||||
Sbjct: 10318639 catattcgttctctgggatcccatattcatcttctagggtttcata 10318594



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 79/96 (82%), Gaps = 1/96 (1%)
 Strand = Plus / Minus

                                                                            
Query: 626      tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
                ||||||| ||||| | |||| |||||||||||||| |||| ||| ||||  | || | ||
Sbjct: 10318568 tcttctagggttttacattcttcctctcgggtcctatatt-cgttttctgggctcccgta 10318510

                                                    
Query: 686      ttcctcttctgagtcttccgctcgagtcctatattc 721
                ||| |  |||||||||| | ||||||||||||||||
Sbjct: 10318509 ttcgttctctgagtctttctctcgagtcctatattc 10318474



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 61/73 (83%)
 Strand = Plus / Minus

                                                                            
Query: 503      tctgagtctttctctaaagtcctatattcgttctctgggttcccatatttgttttctggg 562
                |||||||||| ||||||||| | |||||  | |||| ||  || ||||||||| ||||| 
Sbjct: 10318778 tctgagtcttcctctaaagtgccatatttatcctctcggggcctatatttgttctctgga 10318719

                             
Query: 563      ctcccatattcgt 575
                |||||||||||||
Sbjct: 10318718 ctcccatattcgt 10318706



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                               
Query: 566      ccatattcgttttctagggtttcatattcgt 596
                |||||||| | ||||||||||||||||||||
Sbjct: 10318661 ccatattcatcttctagggtttcatattcgt 10318631



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                               
Query: 329      tctgggctctcgtattcgtcctctgagtctt 359
                ||||||||| ||||||||| |||||||||||
Sbjct: 10318523 tctgggctcccgtattcgttctctgagtctt 10318493



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 526      atattcgttctctgggttcccatatt 551
                |||||||||||||||| |||||||||
Sbjct: 10318638 atattcgttctctgggatcccatatt 10318613



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 547      atatttgttttctgggctcccatattcgtt 576
                ||||| ||||||||||||||| ||||||||
Sbjct: 10318533 atattcgttttctgggctcccgtattcgtt 10318504



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                            
Query: 410      gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtc 469
                ||||| || |||||||  ||||||||||  |||  ||| | ||||||||||||| |||||
Sbjct: 10318520 gggctcccgtattcgttctctgagtctttctctcgagtcctatattcgtcctctagggtc 10318461

                      
Query: 470      ctatat 475
                ||||||
Sbjct: 10318460 ctatat 10318455



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 485      gggttcccatattcctcttctgagtctttctct 517
                |||||||||||||| || |||||||||| ||||
Sbjct: 10318841 gggttcccatattcgtcctctgagtcttcctct 10318809



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                    
Query: 403      ttccccggggctgccatattcgtcttctgagtcttc 438
                |||||| ||| | ||||||||||| |||||||||||
Sbjct: 10318848 ttcccccgggttcccatattcgtcctctgagtcttc 10318813



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                    
Query: 428      tctgagtcttcttctaaagttccatattcgtcctct 463
                ||||||||||| |||||||| |||| |||| |||||
Sbjct: 10318811 tctgagtcttcctctaaagtcccatgttcgacctct 10318776



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                        
Query: 521      gtcctatattcgttctctgggttcccatatttgttttctg 560
                |||||||||||||| |||||| |||| |||| ||| ||||
Sbjct: 10318538 gtcctatattcgttttctgggctcccgtattcgttctctg 10318499
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  381 bits (192), Expect = e-102
 Identities = 317/365 (86%), Gaps = 1/365 (0%)
 Strand = Plus / Minus

                                                                            
Query: 22       ccacctaatatcttatctgcctcttcaggaaaatgaatatctccggaaaatattttgagt 81
                ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| |||
Sbjct: 14367667 ccacctaatatcttatccgcctcttcaggaaaatgaatatctccagaaaagatttttagt 14367608

                                                                            
Query: 82       tccgtatggcnnnnnnnnctcttcactcggaccagtccgcctagtccacttcttgtattt 141
                ||||||||||        ||||||||||| |||| ||| || || | |||||||||||||
Sbjct: 14367607 tccgtatggcttttttttctcttcactcgaaccaatccacccagccgacttcttgtattt 14367548

                                                                            
Query: 142      tttgtgagttgtgtatccactccaataatactattgtcaagtatctttagggatgaagat 201
                ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 14367547 tttgtgagttgtgtatccactccaataatactattgtcaagtacctttagggatgaggat 14367488

                                                                            
Query: 202      ctcggcaagatatgaagttcttgaagaatgnnnnnnnnnccgatctacttctttttggta 261
                |||||||||||||| |||||||| ||||||         | |||||||||||||||||||
Sbjct: 14367487 ctcggcaagatatgcagttcttggagaatg-aaaaaaaactgatctacttctttttggta 14367429

                                                                            
Query: 262      ttttagactaaattcttttgttcctcgatgctcaatcaaaccctcnnnnnnnaagatgga 321
                |||||||||||||||||||||||||||||||||||||||| || |       |||| |||
Sbjct: 14367428 ttttagactaaattcttttgttcctcgatgctcaatcaaaacccccttttttaagacgga 14367369

                                                                            
Query: 322      atcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagt 381
                ||||||||| ||| || | |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 14367368 atcttcctccgggttcccatattcgtcctctgagtcttcctctgagtcttcctctaaagt 14367309

                     
Query: 382      accat 386
                 ||||
Sbjct: 14367308 cccat 14367304



 Score =  381 bits (192), Expect = e-102
 Identities = 317/365 (86%), Gaps = 1/365 (0%)
 Strand = Plus / Plus

                                                                            
Query: 22       ccacctaatatcttatctgcctcttcaggaaaatgaatatctccggaaaatattttgagt 81
                ||||||||||||||||| ||||||||||||||||||||||||||  |||| ||||| |||
Sbjct: 14359685 ccacctaatatcttatccgcctcttcaggaaaatgaatatctccaaaaaagatttttagt 14359744

                                                                            
Query: 82       tccgtatggcnnnnnnnnctcttcactcggaccagtccgcctagtccacttcttgtattt 141
                ||||||||||        ||||||||||| |||| ||| || || | |||||||||||||
Sbjct: 14359745 tccgtatggcttttttttctcttcactcgaaccaatccacccagccgacttcttgtattt 14359804

                                                                            
Query: 142      tttgtgagttgtgtatccactccaataatactattgtcaagtatctttagggatgaagat 201
                ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 14359805 tttgtgagttgtgtatccactccaataatactattgtcaagtacctttagggatgaggat 14359864

                                                                            
Query: 202      ctcggcaagatatgaagttcttgaagaatgnnnnnnnnnccgatctacttctttttggta 261
                |||||||||||||| |||||||| ||||||         |||||||||||||||||||||
Sbjct: 14359865 ctcggcaagatatgcagttcttggagaatg-aaaaaaaaccgatctacttctttttggta 14359923

                                                                            
Query: 262      ttttagactaaattcttttgttcctcgatgctcaatcaaaccctcnnnnnnnaagatgga 321
                |||||||||||||||||||||||||||||||||||||||| || |       |||| |||
Sbjct: 14359924 ttttagactaaattcttttgttcctcgatgctcaatcaaaacccccttttttaagacgga 14359983

                                                                            
Query: 322      atcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagt 381
                ||||||||| ||| || | |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 14359984 atcttcctccgggttcccatattcgtcctctgagtcttcctctgagtcttcctctaaagt 14360043

                     
Query: 382      accat 386
                 ||||
Sbjct: 14360044 cccat 14360048



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 113/136 (83%)
 Strand = Plus / Minus

                                                                            
Query: 416      ccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
                |||| |||||| ||||||||||| |||||||| |||||||  |||||| ||| |||||||
Sbjct: 14367307 ccatgttcgtcctctgagtcttcctctaaagtgccatatttatcctctcggggcctatat 14367248

                                                                            
Query: 476      ttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttc 535
                ||| |||||||  |||||||||| || || || || | ||||  |||||||||||||| |
Sbjct: 14367247 ttgttctctggactcccatattcgtcctcggattcctcctctcgagtcctatattcgtcc 14367188

                                
Query: 536      tctgggttcccatatt 551
                ||| || | |||||||
Sbjct: 14367187 tctaggattccatatt 14367172



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 113/136 (83%)
 Strand = Plus / Plus

                                                                            
Query: 416      ccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
                |||| |||||| ||||||||||| |||||||| |||||||  |||||| ||| |||||||
Sbjct: 14360045 ccatgttcgtcctctgagtcttcctctaaagtgccatatttatcctctcggggcctatat 14360104

                                                                            
Query: 476      ttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttc 535
                ||| |||||||  |||||||||| || || || || | ||||  |||||||||||||| |
Sbjct: 14360105 ttgttctctggactcccatattcgtcctcggattcctcctctcgagtcctatattcgtcc 14360164

                                
Query: 536      tctgggttcccatatt 551
                ||| || | |||||||
Sbjct: 14360165 tctaggattccatatt 14360180



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 73/86 (84%)
 Strand = Plus / Minus

                                                                            
Query: 453      attcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctt 512
                |||| |||||| |||||||||||| | | |||||| |||| ||||| |  ||||||||||
Sbjct: 14367069 attcttcctctcgggtcctatattcgttttctgggctcccgtattcgttctctgagtctt 14367010

                                          
Query: 513      tctctaaagtcctatattcgttctct 538
                |||||  |||||||||||||| ||||
Sbjct: 14367009 tctctcgagtcctatattcgtcctct 14366984



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 73/86 (84%)
 Strand = Plus / Plus

                                                                            
Query: 453      attcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctt 512
                |||| |||||| |||||||||||| | | |||||| |||| ||||| |  ||||||||||
Sbjct: 14360283 attcttcctctcgggtcctatattcgttttctgggctcccgtattcgttctctgagtctt 14360342

                                          
Query: 513      tctctaaagtcctatattcgttctct 538
                |||||  |||||||||||||| ||||
Sbjct: 14360343 tctctcgagtcctatattcgtcctct 14360368



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 50/57 (87%), Gaps = 3/57 (5%)
 Strand = Plus / Minus

                                                                         
Query: 596      tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctct 652
                |||||||| |||||||||||||||| |   ||||||| |||||||||||||| ||||
Sbjct: 14367196 tattcgtcctctaggattccatattca---tcttctagggtttcatattcgttctct 14367143



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 50/57 (87%), Gaps = 3/57 (5%)
 Strand = Plus / Plus

                                                                         
Query: 596      tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctct 652
                |||||||| |||||||||||||||| |   ||||||| |||||||||||||| ||||
Sbjct: 14360156 tattcgtcctctaggattccatattca---tcttctagggtttcatattcgttctct 14360209



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                   
Query: 362      tctgagtcttcctctaaagtaccatatttttcctc 396
                |||||||||||||||||||| |||||||| |||||
Sbjct: 14367295 tctgagtcttcctctaaagtgccatatttatcctc 14367261



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 72/87 (82%)
 Strand = Plus / Minus

                                                                            
Query: 489      tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
                |||||| ||| || |||||||||| ||||||||| | |||||  | |||| ||  || ||
Sbjct: 14367309 tcccatgttcgtcctctgagtcttcctctaaagtgccatatttatcctctcggggcctat 14367250

                                           
Query: 549      atttgttttctgggctcccatattcgt 575
                ||||||| ||||| |||||||||||||
Sbjct: 14367249 atttgttctctggactcccatattcgt 14367223



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                   
Query: 362      tctgagtcttcctctaaagtaccatatttttcctc 396
                |||||||||||||||||||| |||||||| |||||
Sbjct: 14360057 tctgagtcttcctctaaagtgccatatttatcctc 14360091



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 72/87 (82%)
 Strand = Plus / Plus

                                                                            
Query: 489      tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
                |||||| ||| || |||||||||| ||||||||| | |||||  | |||| ||  || ||
Sbjct: 14360043 tcccatgttcgtcctctgagtcttcctctaaagtgccatatttatcctctcggggcctat 14360102

                                           
Query: 549      atttgttttctgggctcccatattcgt 575
                ||||||| ||||| |||||||||||||
Sbjct: 14360103 atttgttctctggactcccatattcgt 14360129



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                              
Query: 546      catatttgttttctgggctcccatattcgttttctagggtttcata 591
                |||||| ||| |||||| |||||||||| | |||||||||||||||
Sbjct: 14367156 catattcgttctctgggatcccatattcatcttctagggtttcata 14367111



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 79/96 (82%), Gaps = 1/96 (1%)
 Strand = Plus / Minus

                                                                            
Query: 626      tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
                ||||||| ||||| | |||| |||||||||||||| |||| ||| ||||  | || | ||
Sbjct: 14367085 tcttctagggttttacattcttcctctcgggtcctatatt-cgttttctgggctcccgta 14367027

                                                    
Query: 686      ttcctcttctgagtcttccgctcgagtcctatattc 721
                ||| |  |||||||||| | ||||||||||||||||
Sbjct: 14367026 ttcgttctctgagtctttctctcgagtcctatattc 14366991



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 79/96 (82%), Gaps = 1/96 (1%)
 Strand = Plus / Plus

                                                                            
Query: 626      tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
                ||||||| ||||| | |||| |||||||||||||| |||| ||| ||||  | || | ||
Sbjct: 14360267 tcttctagggttttacattcttcctctcgggtcctatatt-cgttttctgggctcccgta 14360325

                                                    
Query: 686      ttcctcttctgagtcttccgctcgagtcctatattc 721
                ||| |  |||||||||| | ||||||||||||||||
Sbjct: 14360326 ttcgttctctgagtctttctctcgagtcctatattc 14360361



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                              
Query: 546      catatttgttttctgggctcccatattcgttttctagggtttcata 591
                |||||| ||| |||||| |||||||||| | |||||||||||||||
Sbjct: 14360196 catattcgttctctgggatcccatattcatcttctagggtttcata 14360241



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                    
Query: 428      tctgagtcttcttctaaagttccatattcgtcctct 463
                ||||||||||| |||||||| |||| ||||||||||
Sbjct: 14367328 tctgagtcttcctctaaagtcccatgttcgtcctct 14367293



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                    
Query: 428      tctgagtcttcttctaaagttccatattcgtcctct 463
                ||||||||||| |||||||| |||| ||||||||||
Sbjct: 14360024 tctgagtcttcctctaaagtcccatgttcgtcctct 14360059



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                               
Query: 566      ccatattcgttttctagggtttcatattcgt 596
                |||||||| | ||||||||||||||||||||
Sbjct: 14367178 ccatattcatcttctagggtttcatattcgt 14367148



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                               
Query: 329      tctgggctctcgtattcgtcctctgagtctt 359
                ||||||||| ||||||||| |||||||||||
Sbjct: 14367040 tctgggctcccgtattcgttctctgagtctt 14367010



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 329      tctgggctctcgtattcgtcctctgagtctt 359
                ||||||||| ||||||||| |||||||||||
Sbjct: 14360312 tctgggctcccgtattcgttctctgagtctt 14360342



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 566      ccatattcgttttctagggtttcatattcgt 596
                |||||||| | ||||||||||||||||||||
Sbjct: 14360174 ccatattcatcttctagggtttcatattcgt 14360204



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 526      atattcgttctctgggttcccatatt 551
                |||||||||||||||| |||||||||
Sbjct: 14367155 atattcgttctctgggatcccatatt 14367130



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 547      atatttgttttctgggctcccatattcgtt 576
                ||||| ||||||||||||||| ||||||||
Sbjct: 14367050 atattcgttttctgggctcccgtattcgtt 14367021



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                            
Query: 410      gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtc 469
                ||||| || |||||||  ||||||||||  |||  ||| | ||||||||||||| |||||
Sbjct: 14367037 gggctcccgtattcgttctctgagtctttctctcgagtcctatattcgtcctctagggtc 14366978

                      
Query: 470      ctatat 475
                ||||||
Sbjct: 14366977 ctatat 14366972



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 55/66 (83%)
 Strand = Plus / Plus

                                                                            
Query: 410      gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtc 469
                ||||| || |||||||  ||||||||||  |||  ||| | ||||||||||||| |||||
Sbjct: 14360315 gggctcccgtattcgttctctgagtctttctctcgagtcctatattcgtcctctagggtc 14360374

                      
Query: 470      ctatat 475
                ||||||
Sbjct: 14360375 ctatat 14360380



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 547      atatttgttttctgggctcccatattcgtt 576
                ||||| ||||||||||||||| ||||||||
Sbjct: 14360302 atattcgttttctgggctcccgtattcgtt 14360331



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 526      atattcgttctctgggttcccatatt 551
                |||||||||||||||| |||||||||
Sbjct: 14360197 atattcgttctctgggatcccatatt 14360222



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 485      gggttcccatattcctcttctgagtctttctct 517
                |||||||||||||| || |||||||||| ||||
Sbjct: 14367358 gggttcccatattcgtcctctgagtcttcctct 14367326



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                     
Query: 503      tctgagtctttctctaaagtcctatattcgttctctg 539
                |||||||||| ||||||||||| || ||||| |||||
Sbjct: 14367328 tctgagtcttcctctaaagtcccatgttcgtcctctg 14367292



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                     
Query: 503      tctgagtctttctctaaagtcctatattcgttctctg 539
                |||||||||| ||||||||||| || ||||| |||||
Sbjct: 14360024 tctgagtcttcctctaaagtcccatgttcgtcctctg 14360060



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                 
Query: 485      gggttcccatattcctcttctgagtctttctct 517
                |||||||||||||| || |||||||||| ||||
Sbjct: 14359994 gggttcccatattcgtcctctgagtcttcctct 14360026



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                        
Query: 521      gtcctatattcgttctctgggttcccatatttgttttctg 560
                |||||||||||||| |||||| |||| |||| ||| ||||
Sbjct: 14367055 gtcctatattcgttttctgggctcccgtattcgttctctg 14367016



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                        
Query: 521      gtcctatattcgttctctgggttcccatatttgttttctg 560
                |||||||||||||| |||||| |||| |||| ||| ||||
Sbjct: 14360297 gtcctatattcgttttctgggctcccgtattcgttctctg 14360336
to top
>dbj|AP005408.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0022A24
          Length = 148347

 Score =  381 bits (192), Expect = e-102
 Identities = 317/365 (86%), Gaps = 1/365 (0%)
 Strand = Plus / Minus

                                                                         
Query: 22    ccacctaatatcttatctgcctcttcaggaaaatgaatatctccggaaaatattttgagt 81
             ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| |||
Sbjct: 89589 ccacctaatatcttatccgcctcttcaggaaaatgaatatctccagaaaagatttttagt 89530

                                                                         
Query: 82    tccgtatggcnnnnnnnnctcttcactcggaccagtccgcctagtccacttcttgtattt 141
             ||||||||||        ||||||||||| |||| ||| || || | |||||||||||||
Sbjct: 89529 tccgtatggcttttttttctcttcactcgaaccaatccacccagccgacttcttgtattt 89470

                                                                         
Query: 142   tttgtgagttgtgtatccactccaataatactattgtcaagtatctttagggatgaagat 201
             ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 89469 tttgtgagttgtgtatccactccaataatactattgtcaagtacctttagggatgaggat 89410

                                                                         
Query: 202   ctcggcaagatatgaagttcttgaagaatgnnnnnnnnnccgatctacttctttttggta 261
             |||||||||||||| |||||||| ||||||         | |||||||||||||||||||
Sbjct: 89409 ctcggcaagatatgcagttcttggagaatg-aaaaaaaactgatctacttctttttggta 89351

                                                                         
Query: 262   ttttagactaaattcttttgttcctcgatgctcaatcaaaccctcnnnnnnnaagatgga 321
             |||||||||||||||||||||||||||||||||||||||| || |       |||| |||
Sbjct: 89350 ttttagactaaattcttttgttcctcgatgctcaatcaaaacccccttttttaagacgga 89291

                                                                         
Query: 322   atcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagt 381
             ||||||||| ||| || | |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 89290 atcttcctccgggttcccatattcgtcctctgagtcttcctctgagtcttcctctaaagt 89231

                  
Query: 382   accat 386
              ||||
Sbjct: 89230 cccat 89226



 Score =  381 bits (192), Expect = e-102
 Identities = 317/365 (86%), Gaps = 1/365 (0%)
 Strand = Plus / Plus

                                                                         
Query: 22    ccacctaatatcttatctgcctcttcaggaaaatgaatatctccggaaaatattttgagt 81
             ||||||||||||||||| ||||||||||||||||||||||||||  |||| ||||| |||
Sbjct: 81607 ccacctaatatcttatccgcctcttcaggaaaatgaatatctccaaaaaagatttttagt 81666

                                                                         
Query: 82    tccgtatggcnnnnnnnnctcttcactcggaccagtccgcctagtccacttcttgtattt 141
             ||||||||||        ||||||||||| |||| ||| || || | |||||||||||||
Sbjct: 81667 tccgtatggcttttttttctcttcactcgaaccaatccacccagccgacttcttgtattt 81726

                                                                         
Query: 142   tttgtgagttgtgtatccactccaataatactattgtcaagtatctttagggatgaagat 201
             ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 81727 tttgtgagttgtgtatccactccaataatactattgtcaagtacctttagggatgaggat 81786

                                                                         
Query: 202   ctcggcaagatatgaagttcttgaagaatgnnnnnnnnnccgatctacttctttttggta 261
             |||||||||||||| |||||||| ||||||         |||||||||||||||||||||
Sbjct: 81787 ctcggcaagatatgcagttcttggagaatg-aaaaaaaaccgatctacttctttttggta 81845

                                                                         
Query: 262   ttttagactaaattcttttgttcctcgatgctcaatcaaaccctcnnnnnnnaagatgga 321
             |||||||||||||||||||||||||||||||||||||||| || |       |||| |||
Sbjct: 81846 ttttagactaaattcttttgttcctcgatgctcaatcaaaacccccttttttaagacgga 81905

                                                                         
Query: 322   atcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagt 381
             ||||||||| ||| || | |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 81906 atcttcctccgggttcccatattcgtcctctgagtcttcctctgagtcttcctctaaagt 81965

                  
Query: 382   accat 386
              ||||
Sbjct: 81966 cccat 81970



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 113/136 (83%)
 Strand = Plus / Minus

                                                                         
Query: 416   ccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
             |||| |||||| ||||||||||| |||||||| |||||||  |||||| ||| |||||||
Sbjct: 89229 ccatgttcgtcctctgagtcttcctctaaagtgccatatttatcctctcggggcctatat 89170

                                                                         
Query: 476   ttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttc 535
             ||| |||||||  |||||||||| || || || || | ||||  |||||||||||||| |
Sbjct: 89169 ttgttctctggactcccatattcgtcctcggattcctcctctcgagtcctatattcgtcc 89110

                             
Query: 536   tctgggttcccatatt 551
             ||| || | |||||||
Sbjct: 89109 tctaggattccatatt 89094



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 113/136 (83%)
 Strand = Plus / Plus

                                                                         
Query: 416   ccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
             |||| |||||| ||||||||||| |||||||| |||||||  |||||| ||| |||||||
Sbjct: 81967 ccatgttcgtcctctgagtcttcctctaaagtgccatatttatcctctcggggcctatat 82026

                                                                         
Query: 476   ttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttc 535
             ||| |||||||  |||||||||| || || || || | ||||  |||||||||||||| |
Sbjct: 82027 ttgttctctggactcccatattcgtcctcggattcctcctctcgagtcctatattcgtcc 82086

                             
Query: 536   tctgggttcccatatt 551
             ||| || | |||||||
Sbjct: 82087 tctaggattccatatt 82102



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 73/86 (84%)
 Strand = Plus / Minus

                                                                         
Query: 453   attcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctt 512
             |||| |||||| |||||||||||| | | |||||| |||| ||||| |  ||||||||||
Sbjct: 88991 attcttcctctcgggtcctatattcgttttctgggctcccgtattcgttctctgagtctt 88932

                                       
Query: 513   tctctaaagtcctatattcgttctct 538
             |||||  |||||||||||||| ||||
Sbjct: 88931 tctctcgagtcctatattcgtcctct 88906



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 73/86 (84%)
 Strand = Plus / Plus

                                                                         
Query: 453   attcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctt 512
             |||| |||||| |||||||||||| | | |||||| |||| ||||| |  ||||||||||
Sbjct: 82205 attcttcctctcgggtcctatattcgttttctgggctcccgtattcgttctctgagtctt 82264

                                       
Query: 513   tctctaaagtcctatattcgttctct 538
             |||||  |||||||||||||| ||||
Sbjct: 82265 tctctcgagtcctatattcgtcctct 82290



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 50/57 (87%), Gaps = 3/57 (5%)
 Strand = Plus / Minus

                                                                      
Query: 596   tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctct 652
             |||||||| |||||||||||||||| |   ||||||| |||||||||||||| ||||
Sbjct: 89118 tattcgtcctctaggattccatattca---tcttctagggtttcatattcgttctct 89065



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 50/57 (87%), Gaps = 3/57 (5%)
 Strand = Plus / Plus

                                                                      
Query: 596   tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctct 652
             |||||||| |||||||||||||||| |   ||||||| |||||||||||||| ||||
Sbjct: 82078 tattcgtcctctaggattccatattca---tcttctagggtttcatattcgttctct 82131



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                
Query: 362   tctgagtcttcctctaaagtaccatatttttcctc 396
             |||||||||||||||||||| |||||||| |||||
Sbjct: 89217 tctgagtcttcctctaaagtgccatatttatcctc 89183



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 72/87 (82%)
 Strand = Plus / Minus

                                                                         
Query: 489   tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
             |||||| ||| || |||||||||| ||||||||| | |||||  | |||| ||  || ||
Sbjct: 89231 tcccatgttcgtcctctgagtcttcctctaaagtgccatatttatcctctcggggcctat 89172

                                        
Query: 549   atttgttttctgggctcccatattcgt 575
             ||||||| ||||| |||||||||||||
Sbjct: 89171 atttgttctctggactcccatattcgt 89145



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                
Query: 362   tctgagtcttcctctaaagtaccatatttttcctc 396
             |||||||||||||||||||| |||||||| |||||
Sbjct: 81979 tctgagtcttcctctaaagtgccatatttatcctc 82013



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 72/87 (82%)
 Strand = Plus / Plus

                                                                         
Query: 489   tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
             |||||| ||| || |||||||||| ||||||||| | |||||  | |||| ||  || ||
Sbjct: 81965 tcccatgttcgtcctctgagtcttcctctaaagtgccatatttatcctctcggggcctat 82024

                                        
Query: 549   atttgttttctgggctcccatattcgt 575
             ||||||| ||||| |||||||||||||
Sbjct: 82025 atttgttctctggactcccatattcgt 82051



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                           
Query: 546   catatttgttttctgggctcccatattcgttttctagggtttcata 591
             |||||| ||| |||||| |||||||||| | |||||||||||||||
Sbjct: 89078 catattcgttctctgggatcccatattcatcttctagggtttcata 89033



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 79/96 (82%), Gaps = 1/96 (1%)
 Strand = Plus / Minus

                                                                         
Query: 626   tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
             ||||||| ||||| | |||| |||||||||||||| |||| ||| ||||  | || | ||
Sbjct: 89007 tcttctagggttttacattcttcctctcgggtcctatatt-cgttttctgggctcccgta 88949

                                                 
Query: 686   ttcctcttctgagtcttccgctcgagtcctatattc 721
             ||| |  |||||||||| | ||||||||||||||||
Sbjct: 88948 ttcgttctctgagtctttctctcgagtcctatattc 88913



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 79/96 (82%), Gaps = 1/96 (1%)
 Strand = Plus / Plus

                                                                         
Query: 626   tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
             ||||||| ||||| | |||| |||||||||||||| |||| ||| ||||  | || | ||
Sbjct: 82189 tcttctagggttttacattcttcctctcgggtcctatatt-cgttttctgggctcccgta 82247

                                                 
Query: 686   ttcctcttctgagtcttccgctcgagtcctatattc 721
             ||| |  |||||||||| | ||||||||||||||||
Sbjct: 82248 ttcgttctctgagtctttctctcgagtcctatattc 82283



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                           
Query: 546   catatttgttttctgggctcccatattcgttttctagggtttcata 591
             |||||| ||| |||||| |||||||||| | |||||||||||||||
Sbjct: 82118 catattcgttctctgggatcccatattcatcttctagggtttcata 82163



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                 
Query: 428   tctgagtcttcttctaaagttccatattcgtcctct 463
             ||||||||||| |||||||| |||| ||||||||||
Sbjct: 89250 tctgagtcttcctctaaagtcccatgttcgtcctct 89215



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                 
Query: 428   tctgagtcttcttctaaagttccatattcgtcctct 463
             ||||||||||| |||||||| |||| ||||||||||
Sbjct: 81946 tctgagtcttcctctaaagtcccatgttcgtcctct 81981



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 566   ccatattcgttttctagggtttcatattcgt 596
             |||||||| | ||||||||||||||||||||
Sbjct: 89100 ccatattcatcttctagggtttcatattcgt 89070



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 329   tctgggctctcgtattcgtcctctgagtctt 359
             ||||||||| ||||||||| |||||||||||
Sbjct: 88962 tctgggctcccgtattcgttctctgagtctt 88932



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 329   tctgggctctcgtattcgtcctctgagtctt 359
             ||||||||| ||||||||| |||||||||||
Sbjct: 82234 tctgggctcccgtattcgttctctgagtctt 82264



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 566   ccatattcgttttctagggtttcatattcgt 596
             |||||||| | ||||||||||||||||||||
Sbjct: 82096 ccatattcatcttctagggtttcatattcgt 82126



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 526   atattcgttctctgggttcccatatt 551
             |||||||||||||||| |||||||||
Sbjct: 89077 atattcgttctctgggatcccatatt 89052



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 547   atatttgttttctgggctcccatattcgtt 576
             ||||| ||||||||||||||| ||||||||
Sbjct: 88972 atattcgttttctgggctcccgtattcgtt 88943



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                         
Query: 410   gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtc 469
             ||||| || |||||||  ||||||||||  |||  ||| | ||||||||||||| |||||
Sbjct: 88959 gggctcccgtattcgttctctgagtctttctctcgagtcctatattcgtcctctagggtc 88900

                   
Query: 470   ctatat 475
             ||||||
Sbjct: 88899 ctatat 88894



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 55/66 (83%)
 Strand = Plus / Plus

                                                                         
Query: 410   gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtc 469
             ||||| || |||||||  ||||||||||  |||  ||| | ||||||||||||| |||||
Sbjct: 82237 gggctcccgtattcgttctctgagtctttctctcgagtcctatattcgtcctctagggtc 82296

                   
Query: 470   ctatat 475
             ||||||
Sbjct: 82297 ctatat 82302



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 547   atatttgttttctgggctcccatattcgtt 576
             ||||| ||||||||||||||| ||||||||
Sbjct: 82224 atattcgttttctgggctcccgtattcgtt 82253



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 526   atattcgttctctgggttcccatatt 551
             |||||||||||||||| |||||||||
Sbjct: 82119 atattcgttctctgggatcccatatt 82144



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 485   gggttcccatattcctcttctgagtctttctct 517
             |||||||||||||| || |||||||||| ||||
Sbjct: 89280 gggttcccatattcgtcctctgagtcttcctct 89248



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                  
Query: 503   tctgagtctttctctaaagtcctatattcgttctctg 539
             |||||||||| ||||||||||| || ||||| |||||
Sbjct: 89250 tctgagtcttcctctaaagtcccatgttcgtcctctg 89214



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 503   tctgagtctttctctaaagtcctatattcgttctctg 539
             |||||||||| ||||||||||| || ||||| |||||
Sbjct: 81946 tctgagtcttcctctaaagtcccatgttcgtcctctg 81982



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 485   gggttcccatattcctcttctgagtctttctct 517
             |||||||||||||| || |||||||||| ||||
Sbjct: 81916 gggttcccatattcgtcctctgagtcttcctct 81948



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 521   gtcctatattcgttctctgggttcccatatttgttttctg 560
             |||||||||||||| |||||| |||| |||| ||| ||||
Sbjct: 88977 gtcctatattcgttttctgggctcccgtattcgttctctg 88938



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                     
Query: 521   gtcctatattcgttctctgggttcccatatttgttttctg 560
             |||||||||||||| |||||| |||| |||| ||| ||||
Sbjct: 82219 gtcctatattcgttttctgggctcccgtattcgttctctg 82258
to top
>dbj|AK058964.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-C05, full
            insert sequence
          Length = 1168

 Score =  381 bits (192), Expect = e-102
 Identities = 317/365 (86%), Gaps = 1/365 (0%)
 Strand = Plus / Minus

                                                                        
Query: 22   ccacctaatatcttatctgcctcttcaggaaaatgaatatctccggaaaatattttgagt 81
            ||||||||||||||||| |||||||||||||||||||||||||| | ||| ||||| |||
Sbjct: 1145 ccacctaatatcttatccgcctcttcaggaaaatgaatatctccaggaaagatttttagt 1086

                                                                        
Query: 82   tccgtatggcnnnnnnnnctcttcactcggaccagtccgcctagtccacttcttgtattt 141
            ||||||||||        ||||||||||| |||| ||| || || | |||||||||||||
Sbjct: 1085 tccgtatggcttttttttctcttcactcgaaccaatccacccagccgacttcttgtattt 1026

                                                                        
Query: 142  tttgtgagttgtgtatccactccaataatactattgtcaagtatctttagggatgaagat 201
            ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 1025 tttgtgagttgtgtatccactccaataatactattgtcaagtacctttagggatgaggat 966

                                                                        
Query: 202  ctcggcaagatatgaagttcttgaagaatgnnnnnnnnnccgatctacttctttttggta 261
            |||||||||||||| |||||||| ||||||         |||||||||||||||||||||
Sbjct: 965  ctcggcaagatatgcagttcttggagaatg-aaaaaaaaccgatctacttctttttggta 907

                                                                        
Query: 262  ttttagactaaattcttttgttcctcgatgctcaatcaaaccctcnnnnnnnaagatgga 321
            |||||||||||||||||||||||||||||||||||||||| || |       |||| |||
Sbjct: 906  ttttagactaaattcttttgttcctcgatgctcaatcaaaacccccttttttaagacgga 847

                                                                        
Query: 322  atcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagt 381
            ||||||||| ||| || | |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 846  atcttcctccgggttcccatattcgtcctctgagtcttcctctgagtcttcctctaaagt 787

                 
Query: 382  accat 386
             ||||
Sbjct: 786  cccat 782



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 113/136 (83%)
 Strand = Plus / Minus

                                                                       
Query: 416 ccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           |||| |||||| ||||||||||| |||||||| |||||||  |||||| ||| |||||||
Sbjct: 785 ccatgttcgtcctctgagtcttcctctaaagtgccatatttatcctctcggggcctatat 726

                                                                       
Query: 476 ttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttc 535
           ||| |||||||  |||||||||| || || || || | ||||  |||||||||||||| |
Sbjct: 725 ttgttctctggactcccatattcgtcctcggattcctcctctcgagtcctatattcgtcc 666

                           
Query: 536 tctgggttcccatatt 551
           ||| || | |||||||
Sbjct: 665 tctaggattccatatt 650



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 73/86 (84%)
 Strand = Plus / Minus

                                                                       
Query: 453 attcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctt 512
           |||| |||||| |||||||||||| | | |||||| |||| ||||| |  ||||||||||
Sbjct: 547 attcttcctctcgggtcctatattcgttttctgggctcccgtattcgttctctgagtctt 488

                                     
Query: 513 tctctaaagtcctatattcgttctct 538
           |||||  |||||||||||||| ||||
Sbjct: 487 tctctcgagtcctatattcgtcctct 462



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 50/57 (87%), Gaps = 3/57 (5%)
 Strand = Plus / Minus

                                                                    
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctct 652
           |||||||| |||||||||||||||| |   ||||||| |||||||||||||| ||||
Sbjct: 674 tattcgtcctctaggattccatattca---tcttctagggtttcatattcgttctct 621



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 362 tctgagtcttcctctaaagtaccatatttttcctc 396
           |||||||||||||||||||| |||||||| |||||
Sbjct: 773 tctgagtcttcctctaaagtgccatatttatcctc 739



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 72/87 (82%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||| ||| || |||||||||| ||||||||| | |||||  | |||| ||  || ||
Sbjct: 787 tcccatgttcgtcctctgagtcttcctctaaagtgccatatttatcctctcggggcctat 728

                                      
Query: 549 atttgttttctgggctcccatattcgt 575
           ||||||| ||||| |||||||||||||
Sbjct: 727 atttgttctctggactcccatattcgt 701



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                         
Query: 546 catatttgttttctgggctcccatattcgttttctagggtttcata 591
           |||||| ||| |||||| |||||||||| | |||||||||||||||
Sbjct: 634 catattcgttctctgggatcccatattcatcttctagggtttcata 589



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 79/96 (82%), Gaps = 1/96 (1%)
 Strand = Plus / Minus

                                                                       
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
           ||||||| ||||| | |||| |||||||||||||| |||| ||| ||||  | || | ||
Sbjct: 563 tcttctagggttttacattcttcctctcgggtcctatatt-cgttttctgggctcccgta 505

                                               
Query: 686 ttcctcttctgagtcttccgctcgagtcctatattc 721
           ||| |  |||||||||| | ||||||||||||||||
Sbjct: 504 ttcgttctctgagtctttctctcgagtcctatattc 469



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 428 tctgagtcttcttctaaagttccatattcgtcctct 463
           ||||||||||| |||||||| |||| ||||||||||
Sbjct: 806 tctgagtcttcctctaaagtcccatgttcgtcctct 771



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 566 ccatattcgttttctagggtttcatattcgt 596
           |||||||| | ||||||||||||||||||||
Sbjct: 656 ccatattcatcttctagggtttcatattcgt 626



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 329 tctgggctctcgtattcgtcctctgagtctt 359
           ||||||||| ||||||||| |||||||||||
Sbjct: 518 tctgggctcccgtattcgttctctgagtctt 488



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 526 atattcgttctctgggttcccatatt 551
           |||||||||||||||| |||||||||
Sbjct: 633 atattcgttctctgggatcccatatt 608



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 547 atatttgttttctgggctcccatattcgtt 576
           ||||| ||||||||||||||| ||||||||
Sbjct: 528 atattcgttttctgggctcccgtattcgtt 499



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                       
Query: 410 gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtc 469
           ||||| || |||||||  ||||||||||  |||  ||| | ||||||||||||| |||||
Sbjct: 515 gggctcccgtattcgttctctgagtctttctctcgagtcctatattcgtcctctagggtc 456

                 
Query: 470 ctatat 475
           ||||||
Sbjct: 455 ctatat 450



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 485 gggttcccatattcctcttctgagtctttctct 517
           |||||||||||||| || |||||||||| ||||
Sbjct: 836 gggttcccatattcgtcctctgagtcttcctct 804



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 503 tctgagtctttctctaaagtcctatattcgttctctg 539
           |||||||||| ||||||||||| || ||||| |||||
Sbjct: 806 tctgagtcttcctctaaagtcccatgttcgtcctctg 770



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 521 gtcctatattcgttctctgggttcccatatttgttttctg 560
           |||||||||||||| |||||| |||| |||| ||| ||||
Sbjct: 533 gtcctatattcgttttctgggctcccgtattcgttctctg 494
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  381 bits (192), Expect = e-102
 Identities = 317/365 (86%), Gaps = 1/365 (0%)
 Strand = Plus / Minus

                                                                            
Query: 22       ccacctaatatcttatctgcctcttcaggaaaatgaatatctccggaaaatattttgagt 81
                ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| |||
Sbjct: 10325189 ccacctaatatcttatccgcctcttcaggaaaatgaatatctccagaaaagatttttagt 10325130

                                                                            
Query: 82       tccgtatggcnnnnnnnnctcttcactcggaccagtccgcctagtccacttcttgtattt 141
                ||||||||||        ||||||||||| |||| ||| || || | |||||||||||||
Sbjct: 10325129 tccgtatggcttttttttctcttcactcgaaccaatccacccagccgacttcttgtattt 10325070

                                                                            
Query: 142      tttgtgagttgtgtatccactccaataatactattgtcaagtatctttagggatgaagat 201
                ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 10325069 tttgtgagttgtgtatccactccaataatactattgtcaagtacctttagggatgaggat 10325010

                                                                            
Query: 202      ctcggcaagatatgaagttcttgaagaatgnnnnnnnnnccgatctacttctttttggta 261
                |||||||||||||| |||||||| ||||||         |||||||||||||||||||||
Sbjct: 10325009 ctcggcaagatatgcagttcttggagaatg-aaaaaaaaccgatctacttctttttggta 10324951

                                                                            
Query: 262      ttttagactaaattcttttgttcctcgatgctcaatcaaaccctcnnnnnnnaagatgga 321
                |||||||||||||||||||||||||||||||||||||||| || |       |||| |||
Sbjct: 10324950 ttttagactaaattcttttgttcctcgatgctcaatcaaaacccccttttttaagacgga 10324891

                                                                            
Query: 322      atcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagt 381
                ||||||| | ||| || | |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 10324890 atcttcccccgggttcccatattcgtcctctgagtcttcctctgagtcttcctctaaagt 10324831

                     
Query: 382      accat 386
                 ||||
Sbjct: 10324830 cccat 10324826



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 103/124 (83%)
 Strand = Plus / Minus

                                                                            
Query: 428      tctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatttgctctctggg 487
                ||||||||||| |||||||| |||||||  |||||| ||| |||||||||| ||||||| 
Sbjct: 10324817 tctgagtcttcctctaaagtgccatatttatcctctcggggcctatatttgttctctgga 10324758

                                                                            
Query: 488      ttcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttccca 547
                 |||||||||| || || || || | ||||  |||||||||||||| |||| || | |||
Sbjct: 10324757 ctcccatattcgtcctcggattcctcctctcgagtcctatattcgtcctctaggattcca 10324698

                    
Query: 548      tatt 551
                ||||
Sbjct: 10324697 tatt 10324694



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 73/86 (84%)
 Strand = Plus / Minus

                                                                            
Query: 453      attcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctt 512
                |||| |||||| |||||||||||| | | |||||| |||| ||||| |  ||||||||||
Sbjct: 10324591 attcttcctctcgggtcctatattcgttttctgggctcccgtattcgttctctgagtctt 10324532

                                          
Query: 513      tctctaaagtcctatattcgttctct 538
                |||||  |||||||||||||| ||||
Sbjct: 10324531 tctctcgagtcctatattcgtcctct 10324506



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 50/57 (87%), Gaps = 3/57 (5%)
 Strand = Plus / Minus

                                                                         
Query: 596      tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctct 652
                |||||||| |||||||||||||||| |   ||||||| |||||||||||||| ||||
Sbjct: 10324718 tattcgtcctctaggattccatattca---tcttctagggtttcatattcgttctct 10324665



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                   
Query: 362      tctgagtcttcctctaaagtaccatatttttcctc 396
                |||||||||||||||||||| |||||||| |||||
Sbjct: 10324817 tctgagtcttcctctaaagtgccatatttatcctc 10324783



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                              
Query: 546      catatttgttttctgggctcccatattcgttttctagggtttcata 591
                |||||| ||| |||||| |||||||||| | |||||||||||||||
Sbjct: 10324678 catattcgttctctgggatcccatattcatcttctagggtttcata 10324633



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 79/96 (82%), Gaps = 1/96 (1%)
 Strand = Plus / Minus

                                                                            
Query: 626      tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
                ||||||| ||||| | |||| |||||||||||||| |||| ||| ||||  | || | ||
Sbjct: 10324607 tcttctagggttttacattcttcctctcgggtcctatatt-cgttttctgggctcccgta 10324549

                                                    
Query: 686      ttcctcttctgagtcttccgctcgagtcctatattc 721
                ||| |  |||||||||| | ||||||||||||||||
Sbjct: 10324548 ttcgttctctgagtctttctctcgagtcctatattc 10324513



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 61/73 (83%)
 Strand = Plus / Minus

                                                                            
Query: 503      tctgagtctttctctaaagtcctatattcgttctctgggttcccatatttgttttctggg 562
                |||||||||| ||||||||| | |||||  | |||| ||  || ||||||||| ||||| 
Sbjct: 10324817 tctgagtcttcctctaaagtgccatatttatcctctcggggcctatatttgttctctgga 10324758

                             
Query: 563      ctcccatattcgt 575
                |||||||||||||
Sbjct: 10324757 ctcccatattcgt 10324745



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                               
Query: 566      ccatattcgttttctagggtttcatattcgt 596
                |||||||| | ||||||||||||||||||||
Sbjct: 10324700 ccatattcatcttctagggtttcatattcgt 10324670



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                               
Query: 329      tctgggctctcgtattcgtcctctgagtctt 359
                ||||||||| ||||||||| |||||||||||
Sbjct: 10324562 tctgggctcccgtattcgttctctgagtctt 10324532



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 526      atattcgttctctgggttcccatatt 551
                |||||||||||||||| |||||||||
Sbjct: 10324677 atattcgttctctgggatcccatatt 10324652



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 547      atatttgttttctgggctcccatattcgtt 576
                ||||| ||||||||||||||| ||||||||
Sbjct: 10324572 atattcgttttctgggctcccgtattcgtt 10324543



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                            
Query: 410      gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtc 469
                ||||| || |||||||  ||||||||||  |||  ||| | ||||||||||||| |||||
Sbjct: 10324559 gggctcccgtattcgttctctgagtctttctctcgagtcctatattcgtcctctagggtc 10324500

                      
Query: 470      ctatat 475
                ||||||
Sbjct: 10324499 ctatat 10324494



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 485      gggttcccatattcctcttctgagtctttctct 517
                |||||||||||||| || |||||||||| ||||
Sbjct: 10324880 gggttcccatattcgtcctctgagtcttcctct 10324848



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                    
Query: 403      ttccccggggctgccatattcgtcttctgagtcttc 438
                |||||| ||| | ||||||||||| |||||||||||
Sbjct: 10324887 ttcccccgggttcccatattcgtcctctgagtcttc 10324852



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                    
Query: 428      tctgagtcttcttctaaagttccatattcgtcctct 463
                ||||||||||| |||||||| |||| |||| |||||
Sbjct: 10324850 tctgagtcttcctctaaagtcccatgttcgacctct 10324815



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                        
Query: 521      gtcctatattcgttctctgggttcccatatttgttttctg 560
                |||||||||||||| |||||| |||| |||| ||| ||||
Sbjct: 10324577 gtcctatattcgttttctgggctcccgtattcgttctctg 10324538
to top
>gb|AY607072.1| Hordeum vulgare subsp. spontaneum voucher H3139 RNA polymerase beta
           subunit (rpoC2) gene, partial cds; chloroplast
          Length = 186

 Score =  361 bits (182), Expect = 2e-96
 Identities = 185/186 (99%)
 Strand = Plus / Minus

                                                                       
Query: 328 ctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtaccata 387
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 ctctggcctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtaccata 127

                                                                       
Query: 388 tttttcctcgccgctttccccggggctgccatattcgtcttctgagtcttcttctaaagt 447
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 tttttcctcgccgctttccccggggctgccatattcgtcttctgagtcttcttctaaagt 67

                                                                       
Query: 448 tccatattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctga 507
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66  tccatattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctga 7

                 
Query: 508 gtcttt 513
           ||||||
Sbjct: 6   gtcttt 1



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                       
Query: 491 ccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccatat 550
           |||||||| |||||||||||||  |||||||| | |||||||| |||| || ||| ||||
Sbjct: 98  ccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 39

                                  
Query: 551 ttgttttctgggctcccatattc 573
           ||| | |||||| ||||||||||
Sbjct: 38  ttgctctctgggttcccatattc 16



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 625 ttcttctanggtttcatattcgtcctctcgggtcctgtatt 665
           ||||||||  ||| |||||||||||||| ||||||| ||||
Sbjct: 78  ttcttctaaagttccatattcgtcctcttgggtcctatatt 38



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 682 catattcctcttctgagtctt 702
           |||||||||||||||||||||
Sbjct: 22  catattcctcttctgagtctt 2
to top
>gb|AY607074.1| Hordeum brachyantherum subsp. californicum voucher H1942 RNA
           polymerase beta subunit (rpoC2) gene, partial cds;
           chloroplast
          Length = 186

 Score =  353 bits (178), Expect = 5e-94
 Identities = 184/186 (98%)
 Strand = Plus / Minus

                                                                       
Query: 328 ctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtaccata 387
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 ctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtaccata 127

                                                                       
Query: 388 tttttcctcgccgctttccccggggctgccatattcgtcttctgagtcttcttctaaagt 447
           ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 126 tttttcctctccgctttccccggggctgccatattcgtcttctgagtcttcctctaaagt 67

                                                                       
Query: 448 tccatattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctga 507
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66  tccatattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctga 7

                 
Query: 508 gtcttt 513
           ||||||
Sbjct: 6   gtcttt 1



 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 72/83 (86%)
 Strand = Plus / Minus

                                                                       
Query: 491 ccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccatat 550
           |||||||| ||||||||||||| ||||||||| | |||||||| |||| || ||| ||||
Sbjct: 98  ccatattcgtcttctgagtcttcctctaaagttccatattcgtcctcttgggtcctatat 39

                                  
Query: 551 ttgttttctgggctcccatattc 573
           ||| | |||||| ||||||||||
Sbjct: 38  ttgctctctgggttcccatattc 16



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 682 catattcctcttctgagtctt 702
           |||||||||||||||||||||
Sbjct: 22  catattcctcttctgagtctt 2
to top
>gb|AY607073.1| Hordeum erectifolium voucher H1150 RNA polymerase beta subunit
           (rpoC2) gene, partial cds; chloroplast
          Length = 186

 Score =  353 bits (178), Expect = 5e-94
 Identities = 184/186 (98%)
 Strand = Plus / Minus

                                                                       
Query: 328 ctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtaccata 387
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 ctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtaccata 127

                                                                       
Query: 388 tttttcctcgccgctttccccggggctgccatattcgtcttctgagtcttcttctaaagt 447
           ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 126 tttttcctctccgctttccccggggctgccatattcgtcttctgagtcttcctctaaagt 67

                                                                       
Query: 448 tccatattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctga 507
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66  tccatattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctga 7

                 
Query: 508 gtcttt 513
           ||||||
Sbjct: 6   gtcttt 1



 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 72/83 (86%)
 Strand = Plus / Minus

                                                                       
Query: 491 ccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccatat 550
           |||||||| ||||||||||||| ||||||||| | |||||||| |||| || ||| ||||
Sbjct: 98  ccatattcgtcttctgagtcttcctctaaagttccatattcgtcctcttgggtcctatat 39

                                  
Query: 551 ttgttttctgggctcccatattc 573
           ||| | |||||| ||||||||||
Sbjct: 38  ttgctctctgggttcccatattc 16



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 682 catattcctcttctgagtctt 702
           |||||||||||||||||||||
Sbjct: 22  catattcctcttctgagtctt 2
to top
>gb|AY607075.1| Hordeum murinum subsp. glaucum voucher H810 RNA polymerase beta
           subunit (rpoC2) gene, partial cds; chloroplast
          Length = 186

 Score =  345 bits (174), Expect = 1e-91
 Identities = 183/186 (98%)
 Strand = Plus / Minus

                                                                       
Query: 328 ctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtaccata 387
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 ctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtaccata 127

                                                                       
Query: 388 tttttcctcgccgctttccccggggctgccatattcgtcttctgagtcttcttctaaagt 447
           ||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 126 tttttcctctccgctttccccggggctgccatatttgtcttctgagtcttcctctaaagt 67

                                                                       
Query: 448 tccatattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctga 507
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66  tccatattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctga 7

                 
Query: 508 gtcttt 513
           ||||||
Sbjct: 6   gtcttt 1



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                       
Query: 491 ccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccatat 550
           |||||||  ||||||||||||| ||||||||| | |||||||| |||| || ||| ||||
Sbjct: 98  ccatatttgtcttctgagtcttcctctaaagttccatattcgtcctcttgggtcctatat 39

                                  
Query: 551 ttgttttctgggctcccatattc 573
           ||| | |||||| ||||||||||
Sbjct: 38  ttgctctctgggttcccatattc 16



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 682 catattcctcttctgagtctt 702
           |||||||||||||||||||||
Sbjct: 22  catattcctcttctgagtctt 2
to top
>gb|AY607088.1| Psathyrostachys rupestris subsp. daghestanica voucher H6703 RNA
           polymerase beta subunit (rpoC2) gene, partial cds;
           chloroplast
          Length = 186

 Score =  307 bits (155), Expect = 3e-80
 Identities = 178/186 (95%)
 Strand = Plus / Minus

                                                                       
Query: 328 ctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtaccata 387
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 186 ctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtcccata 127

                                                                       
Query: 388 tttttcctcgccgctttccccggggctgccatattcgtcttctgagtcttcttctaaagt 447
           ||| |||||  |||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 126 tttgtcctctgcgctttccccggggctgccatattcgtcttctgagtcttcctctagagt 67

                                                                       
Query: 448 tccatattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctga 507
           ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 66  tccatattcgtcctcttgggtcctatatttgctttctgggntcccatattcctcttctga 7

                 
Query: 508 gtcttt 513
           ||||||
Sbjct: 6   gtcttt 1



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 72/83 (86%)
 Strand = Plus / Minus

                                                                       
Query: 491 ccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccatat 550
           |||||||| ||||||||||||| ||||| ||| | |||||||| |||| || ||| ||||
Sbjct: 98  ccatattcgtcttctgagtcttcctctagagttccatattcgtcctcttgggtcctatat 39

                                  
Query: 551 ttgttttctgggctcccatattc 573
           ||| |||||||| ||||||||||
Sbjct: 38  ttgctttctgggntcccatattc 16



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 500 tcttctgagtctttctctaaagtcctatattcgttctctg 539
           ||||||||||||| ||||||||||| ||||| || |||||
Sbjct: 155 tcttctgagtcttcctctaaagtcccatatttgtcctctg 116



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 54/64 (84%), Gaps = 1/64 (1%)
 Strand = Plus / Minus

                                                                       
Query: 639 catattcgtcctctcgggtcctgtattccgtgttctanggtctcatattcctcttctgag 698
           |||||||||||||| ||||||| ||||   | ||||  | || |||||||||||||||||
Sbjct: 64  catattcgtcctcttgggtcctatatttgct-ttctgggntcccatattcctcttctgag 6

               
Query: 699 tctt 702
           ||||
Sbjct: 5   tctt 2



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| ||||||||||||||| || |||| | ||||||
Sbjct: 97  catattcgtcttctgagtcttcctctagagttccatattc 58
to top
>gb|U92263.1|AAU92263 Anisopogon avenaceus RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 464

 Score =  305 bits (154), Expect = 1e-79
 Identities = 208/226 (92%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 395

                                                                       
Query: 374 tctaaagtaccatatttttcctcgccgctttccccggggctgccatattcgtcttctgag 433
           |||||||| |||||||| |||||   |  ||||||  |||| |||||||||| |||||||
Sbjct: 394 tctaaagtcccatatttgtcctctgagtcttcccccaggctcccatattcgtattctgag 335

                                                                       
Query: 434 tcttcttctaaagttccatattcgtcctcttgggtcctatatttgctctctgggttccca 493
           ||||| |||| ||||||||||||||||||| |||||||||||| |||||||||| |||||
Sbjct: 334 tcttcctctagagttccatattcgtcctctcgggtcctatattcgctctctgggctccca 275

                                                         
Query: 494 tattcctcttctgagtctttctctaaagtcctatattcgttctctg 539
           ||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 274 tattcgtcttctgagtctttctctaaagtcctatattccttctctg 229



 Score =  151 bits (76), Expect = 4e-33
 Identities = 143/165 (86%), Gaps = 7/165 (4%)
 Strand = Plus / Minus

                                                                       
Query: 557 tctgggctcccatattcgttttctagggtttcatattcgtattcgtcttctaggattcca 616
           |||| |||||| ||||||| ||||||||||||||||||||      | |||||||| |||
Sbjct: 232 tctgagctcccgtattcgtcttctagggtttcatattcgt------cctctaggatccca 179

                                                                       
Query: 617 tatttagattcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctan 676
           ||||||  |||||||| ||||||||||||||||||||| ||||| |||| ||| ||||| 
Sbjct: 178 tatttatcttcttctagggtttcatattcgtcctctcgagtcctatatt-cgtcttctag 120

                                                        
Query: 677 ggtctcatattcctcttctgagtcttccgctcgagtcctatattc 721
           |||||||||||| || |||||||||||| ||||||||||||||||
Sbjct: 119 ggtctcatattcgtcctctgagtcttcctctcgagtcctatattc 75



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 88/105 (83%)
 Strand = Plus / Minus

                                                                       
Query: 434 tcttcttctaaagttccatattcgtcctcttgggtcctatatttgctctctgggttccca 493
           ||||||||||  ||| |||||||||||||| | |||||||||| |   ||| || || ||
Sbjct: 172 tcttcttctagggtttcatattcgtcctctcgagtcctatattcgtcttctagggtctca 113

                                                        
Query: 494 tattcctcttctgagtctttctctaaagtcctatattcgttctct 538
           ||||| || |||||||||| ||||  |||||||||||||||||||
Sbjct: 112 tattcgtcctctgagtcttcctctcgagtcctatattcgttctct 68



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 78/92 (84%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| | ||||||||||| ||||| ||| | |||||||| |||| || ||| ||
Sbjct: 354 tcccatattcgtattctgagtcttcctctagagttccatattcgtcctctcgggtcctat 295

                                           
Query: 549 atttgttttctgggctcccatattcgttttct 580
           ||| | | ||||||||||||||||||| ||||
Sbjct: 294 attcgctctctgggctcccatattcgtcttct 263



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                      
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           |||||||||| ||||||||||| |||  ||| | |||||||| |||| |||||||||||
Sbjct: 114 catattcgtcctctgagtcttcctctcgagtcctatattcgttctctagggtcctatat 56



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 521 gtcctatattcgttctctgggttcccatatttgttttctg 560
           |||||||||||| |||||||| ||||||||| || |||||
Sbjct: 301 gtcctatattcgctctctgggctcccatattcgtcttctg 262



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 69/83 (83%), Gaps = 1/83 (1%)
 Strand = Plus / Minus

                                                                       
Query: 639 catattcgtcctctcgggtcctgtattccgtgttctanggtctcatattcctcttctgag 698
           |||||||||||||||||||||| |||||  | | ||  | || ||||||| |||||||||
Sbjct: 318 catattcgtcctctcgggtcctatattcgctct-ctgggctcccatattcgtcttctgag 260

                                  
Query: 699 tcttccgctcgagtcctatattc 721
           |||| | ||  ||||||||||||
Sbjct: 259 tctttctctaaagtcctatattc 237



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 336 tctcgtattcgtcctctgagtcttc 360
           |||| ||||||||||||||||||||
Sbjct: 117 tctcatattcgtcctctgagtcttc 93
to top
>gb|AY607089.1| Psathyrostachys caduca voucher H6702 RNA polymerase beta subunit
           (rpoC2) gene, partial cds; chloroplast
          Length = 186

 Score =  297 bits (150), Expect = 3e-77
 Identities = 177/186 (95%)
 Strand = Plus / Minus

                                                                       
Query: 328 ctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtaccata 387
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 186 ctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtcccata 127

                                                                       
Query: 388 tttttcctcgccgctttccccggggctgccatattcgtcttctgagtcttcttctaaagt 447
           ||| |||||  ||||||| |||||||||||||||||||||||||||||||| |||| |||
Sbjct: 126 tttgtcctctgcgctttctccggggctgccatattcgtcttctgagtcttcctctagagt 67

                                                                       
Query: 448 tccatattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctga 507
           ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 66  tccatattcgtcctcttgggtcctatatttgctttctgcgttcccatattcctcttctga 7

                 
Query: 508 gtcttt 513
           ||||||
Sbjct: 6   gtcttt 1



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                       
Query: 491 ccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccatat 550
           |||||||| ||||||||||||| ||||| ||| | |||||||| |||| || ||| ||||
Sbjct: 98  ccatattcgtcttctgagtcttcctctagagttccatattcgtcctcttgggtcctatat 39

                                  
Query: 551 ttgttttctgggctcccatattc 573
           ||| |||||| | ||||||||||
Sbjct: 38  ttgctttctgcgttcccatattc 16



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 500 tcttctgagtctttctctaaagtcctatattcgttctctg 539
           ||||||||||||| ||||||||||| ||||| || |||||
Sbjct: 155 tcttctgagtcttcctctaaagtcccatatttgtcctctg 116



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 682 catattcctcttctgagtctt 702
           |||||||||||||||||||||
Sbjct: 22  catattcctcttctgagtctt 2



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| ||||||||||||||| || |||| | ||||||
Sbjct: 97  catattcgtcttctgagtcttcctctagagttccatattc 58
to top
>gb|AY607087.1| Psathyrostachys caduca voucher H6700 RNA polymerase beta subunit
           (rpoC2) gene, partial cds; chloroplast
          Length = 186

 Score =  297 bits (150), Expect = 3e-77
 Identities = 177/186 (95%)
 Strand = Plus / Minus

                                                                       
Query: 328 ctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtaccata 387
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 186 ctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtcccata 127

                                                                       
Query: 388 tttttcctcgccgctttccccggggctgccatattcgtcttctgagtcttcttctaaagt 447
           ||| |||||  ||||||| |||||||||||||||||||||||||||||||| |||| |||
Sbjct: 126 tttgtcctctgcgctttctccggggctgccatattcgtcttctgagtcttcctctagagt 67

                                                                       
Query: 448 tccatattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctga 507
           ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 66  tccatattcgtcctcttgggtcctatatttgctttctgcgttcccatattcctcttctga 7

                 
Query: 508 gtcttt 513
           ||||||
Sbjct: 6   gtcttt 1



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                       
Query: 491 ccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccatat 550
           |||||||| ||||||||||||| ||||| ||| | |||||||| |||| || ||| ||||
Sbjct: 98  ccatattcgtcttctgagtcttcctctagagttccatattcgtcctcttgggtcctatat 39

                                  
Query: 551 ttgttttctgggctcccatattc 573
           ||| |||||| | ||||||||||
Sbjct: 38  ttgctttctgcgttcccatattc 16



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 500 tcttctgagtctttctctaaagtcctatattcgttctctg 539
           ||||||||||||| ||||||||||| ||||| || |||||
Sbjct: 155 tcttctgagtcttcctctaaagtcccatatttgtcctctg 116



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 682 catattcctcttctgagtctt 702
           |||||||||||||||||||||
Sbjct: 22  catattcctcttctgagtctt 2



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| ||||||||||||||| || |||| | ||||||
Sbjct: 97  catattcgtcttctgagtcttcctctagagttccatattc 58
to top
>gb|AY607086.1| Psathyrostachys huashanica voucher H3087 RNA polymerase beta
           subunit (rpoC2) gene, partial cds; chloroplast
          Length = 186

 Score =  297 bits (150), Expect = 3e-77
 Identities = 177/186 (95%)
 Strand = Plus / Minus

                                                                       
Query: 328 ctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtaccata 387
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 186 ctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtcccata 127

                                                                       
Query: 388 tttttcctcgccgctttccccggggctgccatattcgtcttctgagtcttcttctaaagt 447
           ||| |||||  ||||||| |||||||||||||||||||||||||||||||| |||| |||
Sbjct: 126 tttgtcctctgcgctttctccggggctgccatattcgtcttctgagtcttcctctagagt 67

                                                                       
Query: 448 tccatattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctga 507
           ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 66  tccatattcgtcctcttgggtcctatatttgctttctgcgttcccatattcctcttctga 7

                 
Query: 508 gtcttt 513
           ||||||
Sbjct: 6   gtcttt 1



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                       
Query: 491 ccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccatat 550
           |||||||| ||||||||||||| ||||| ||| | |||||||| |||| || ||| ||||
Sbjct: 98  ccatattcgtcttctgagtcttcctctagagttccatattcgtcctcttgggtcctatat 39

                                  
Query: 551 ttgttttctgggctcccatattc 573
           ||| |||||| | ||||||||||
Sbjct: 38  ttgctttctgcgttcccatattc 16



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 500 tcttctgagtctttctctaaagtcctatattcgttctctg 539
           ||||||||||||| ||||||||||| ||||| || |||||
Sbjct: 155 tcttctgagtcttcctctaaagtcccatatttgtcctctg 116



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 682 catattcctcttctgagtctt 702
           |||||||||||||||||||||
Sbjct: 22  catattcctcttctgagtctt 2



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| ||||||||||||||| || |||| | ||||||
Sbjct: 97  catattcgtcttctgagtcttcctctagagttccatattc 58
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>gb|AY607085.1| Psathyrostachys fragilis subsp. villosus voucher H4378 RNA
           polymerase beta subunit (rpoC2) gene, partial cds;
           chloroplast
          Length = 186

 Score =  297 bits (150), Expect = 3e-77
 Identities = 177/186 (95%)
 Strand = Plus / Minus

                                                                       
Query: 328 ctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtaccata 387
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 186 ctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtcccata 127

                                                                       
Query: 388 tttttcctcgccgctttccccggggctgccatattcgtcttctgagtcttcttctaaagt 447
           ||| |||||  ||||||| |||||||||||||||||||||||||||||||| |||| |||
Sbjct: 126 tttgtcctctgcgctttctccggggctgccatattcgtcttctgagtcttcctctagagt 67

                                                                       
Query: 448 tccatattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctga 507
           ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 66  tccatattcgtcctcttgggtcctatatttgctttctgcgttcccatattcctcttctga 7

                 
Query: 508 gtcttt 513
           ||||||
Sbjct: 6   gtcttt 1



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                       
Query: 491 ccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccatat 550
           |||||||| ||||||||||||| ||||| ||| | |||||||| |||| || ||| ||||
Sbjct: 98  ccatattcgtcttctgagtcttcctctagagttccatattcgtcctcttgggtcctatat 39

                                  
Query: 551 ttgttttctgggctcccatattc 573
           ||| |||||| | ||||||||||
Sbjct: 38  ttgctttctgcgttcccatattc 16



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 500 tcttctgagtctttctctaaagtcctatattcgttctctg 539
           ||||||||||||| ||||||||||| ||||| || |||||
Sbjct: 155 tcttctgagtcttcctctaaagtcccatatttgtcctctg 116



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 682 catattcctcttctgagtctt 702
           |||||||||||||||||||||
Sbjct: 22  catattcctcttctgagtctt 2



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| ||||||||||||||| || |||| | ||||||
Sbjct: 97  catattcgtcttctgagtcttcctctagagttccatattc 58
to top
>gb|AY607084.1| Psathyrostachys fragilis subsp. villosus voucher H4375 RNA
           polymerase beta subunit (rpoC2) gene, partial cds;
           chloroplast
          Length = 186

 Score =  297 bits (150), Expect = 3e-77
 Identities = 177/186 (95%)
 Strand = Plus / Minus

                                                                       
Query: 328 ctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtaccata 387
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 186 ctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtcccata 127

                                                                       
Query: 388 tttttcctcgccgctttccccggggctgccatattcgtcttctgagtcttcttctaaagt 447
           ||| |||||  ||||||| |||||||||||||||||||||||||||||||| |||| |||
Sbjct: 126 tttgtcctctgcgctttctccggggctgccatattcgtcttctgagtcttcctctagagt 67

                                                                       
Query: 448 tccatattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctga 507
           ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 66  tccatattcgtcctcttgggtcctatatttgctttctgcgttcccatattcctcttctga 7

                 
Query: 508 gtcttt 513
           ||||||
Sbjct: 6   gtcttt 1



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                       
Query: 491 ccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccatat 550
           |||||||| ||||||||||||| ||||| ||| | |||||||| |||| || ||| ||||
Sbjct: 98  ccatattcgtcttctgagtcttcctctagagttccatattcgtcctcttgggtcctatat 39

                                  
Query: 551 ttgttttctgggctcccatattc 573
           ||| |||||| | ||||||||||
Sbjct: 38  ttgctttctgcgttcccatattc 16



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 500 tcttctgagtctttctctaaagtcctatattcgttctctg 539
           ||||||||||||| ||||||||||| ||||| || |||||
Sbjct: 155 tcttctgagtcttcctctaaagtcccatatttgtcctctg 116



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 682 catattcctcttctgagtctt 702
           |||||||||||||||||||||
Sbjct: 22  catattcctcttctgagtctt 2



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| ||||||||||||||| || |||| | ||||||
Sbjct: 97  catattcgtcttctgagtcttcctctagagttccatattc 58
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>gb|AY607083.1| Psathyrostachys fragilis subsp. villosus voucher H4372 RNA
           polymerase beta subunit (rpoC2) gene, partial cds;
           chloroplast
          Length = 186

 Score =  297 bits (150), Expect = 3e-77
 Identities = 177/186 (95%)
 Strand = Plus / Minus

                                                                       
Query: 328 ctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtaccata 387
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 186 ctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtcccata 127

                                                                       
Query: 388 tttttcctcgccgctttccccggggctgccatattcgtcttctgagtcttcttctaaagt 447
           ||| |||||  ||||||| |||||||||||||||||||||||||||||||| |||| |||
Sbjct: 126 tttgtcctctgcgctttctccggggctgccatattcgtcttctgagtcttcctctagagt 67

                                                                       
Query: 448 tccatattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctga 507
           ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 66  tccatattcgtcctcttgggtcctatatttgctttctgcgttcccatattcctcttctga 7

                 
Query: 508 gtcttt 513
           ||||||
Sbjct: 6   gtcttt 1



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                       
Query: 491 ccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccatat 550
           |||||||| ||||||||||||| ||||| ||| | |||||||| |||| || ||| ||||
Sbjct: 98  ccatattcgtcttctgagtcttcctctagagttccatattcgtcctcttgggtcctatat 39

                                  
Query: 551 ttgttttctgggctcccatattc 573
           ||| |||||| | ||||||||||
Sbjct: 38  ttgctttctgcgttcccatattc 16



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 500 tcttctgagtctttctctaaagtcctatattcgttctctg 539
           ||||||||||||| ||||||||||| ||||| || |||||
Sbjct: 155 tcttctgagtcttcctctaaagtcccatatttgtcctctg 116



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 682 catattcctcttctgagtctt 702
           |||||||||||||||||||||
Sbjct: 22  catattcctcttctgagtctt 2



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| ||||||||||||||| || |||| | ||||||
Sbjct: 97  catattcgtcttctgagtcttcctctagagttccatattc 58
to top
>gb|AY607082.1| Psathyrostachys fragilis subsp. secaliformis voucher H4348 RNA
           polymerase beta subunit (rpoC2) gene, partial cds;
           chloroplast
          Length = 186

 Score =  297 bits (150), Expect = 3e-77
 Identities = 177/186 (95%)
 Strand = Plus / Minus

                                                                       
Query: 328 ctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtaccata 387
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 186 ctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtcccata 127

                                                                       
Query: 388 tttttcctcgccgctttccccggggctgccatattcgtcttctgagtcttcttctaaagt 447
           ||| |||||  ||||||| |||||||||||||||||||||||||||||||| |||| |||
Sbjct: 126 tttgtcctctgcgctttctccggggctgccatattcgtcttctgagtcttcctctagagt 67

                                                                       
Query: 448 tccatattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctga 507
           ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 66  tccatattcgtcctcttgggtcctatatttgctttctgcgttcccatattcctcttctga 7

                 
Query: 508 gtcttt 513
           ||||||
Sbjct: 6   gtcttt 1



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                       
Query: 491 ccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccatat 550
           |||||||| ||||||||||||| ||||| ||| | |||||||| |||| || ||| ||||
Sbjct: 98  ccatattcgtcttctgagtcttcctctagagttccatattcgtcctcttgggtcctatat 39

                                  
Query: 551 ttgttttctgggctcccatattc 573
           ||| |||||| | ||||||||||
Sbjct: 38  ttgctttctgcgttcccatattc 16



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 500 tcttctgagtctttctctaaagtcctatattcgttctctg 539
           ||||||||||||| ||||||||||| ||||| || |||||
Sbjct: 155 tcttctgagtcttcctctaaagtcccatatttgtcctctg 116



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 682 catattcctcttctgagtctt 702
           |||||||||||||||||||||
Sbjct: 22  catattcctcttctgagtctt 2



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| ||||||||||||||| || |||| | ||||||
Sbjct: 97  catattcgtcttctgagtcttcctctagagttccatattc 58
to top
>gb|AY607081.1| Psathyrostachys fragilis subsp. fragilis voucher H917 RNA
           polymerase beta subunit (rpoC2) gene, partial cds;
           chloroplast
          Length = 186

 Score =  297 bits (150), Expect = 3e-77
 Identities = 177/186 (95%)
 Strand = Plus / Minus

                                                                       
Query: 328 ctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtaccata 387
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 186 ctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtcccata 127

                                                                       
Query: 388 tttttcctcgccgctttccccggggctgccatattcgtcttctgagtcttcttctaaagt 447
           ||| |||||  ||||||| |||||||||||||||||||||||||||||||| |||| |||
Sbjct: 126 tttgtcctctgcgctttctccggggctgccatattcgtcttctgagtcttcctctagagt 67

                                                                       
Query: 448 tccatattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctga 507
           ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 66  tccatattcgtcctcttgggtcctatatttgctttctgcgttcccatattcctcttctga 7

                 
Query: 508 gtcttt 513
           ||||||
Sbjct: 6   gtcttt 1



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                       
Query: 491 ccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccatat 550
           |||||||| ||||||||||||| ||||| ||| | |||||||| |||| || ||| ||||
Sbjct: 98  ccatattcgtcttctgagtcttcctctagagttccatattcgtcctcttgggtcctatat 39

                                  
Query: 551 ttgttttctgggctcccatattc 573
           ||| |||||| | ||||||||||
Sbjct: 38  ttgctttctgcgttcccatattc 16



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 500 tcttctgagtctttctctaaagtcctatattcgttctctg 539
           ||||||||||||| ||||||||||| ||||| || |||||
Sbjct: 155 tcttctgagtcttcctctaaagtcccatatttgtcctctg 116



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 682 catattcctcttctgagtctt 702
           |||||||||||||||||||||
Sbjct: 22  catattcctcttctgagtctt 2



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| ||||||||||||||| || |||| | ||||||
Sbjct: 97  catattcgtcttctgagtcttcctctagagttccatattc 58
to top
>gb|AY607080.1| Psathyrostachys lanuginosa voucher H8803 RNA polymerase beta
           subunit (rpoC2) gene, partial cds; chloroplast
          Length = 186

 Score =  297 bits (150), Expect = 3e-77
 Identities = 177/186 (95%)
 Strand = Plus / Minus

                                                                       
Query: 328 ctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtaccata 387
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 186 ctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtcccata 127

                                                                       
Query: 388 tttttcctcgccgctttccccggggctgccatattcgtcttctgagtcttcttctaaagt 447
           ||| |||||  ||||||| |||||||||||||||||||||||||||||||| |||| |||
Sbjct: 126 tttgtcctctgcgctttctccggggctgccatattcgtcttctgagtcttcctctagagt 67

                                                                       
Query: 448 tccatattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctga 507
           ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 66  tccatattcgtcctcttgggtcctatatttgctttctgcgttcccatattcctcttctga 7

                 
Query: 508 gtcttt 513
           ||||||
Sbjct: 6   gtcttt 1



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                       
Query: 491 ccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccatat 550
           |||||||| ||||||||||||| ||||| ||| | |||||||| |||| || ||| ||||
Sbjct: 98  ccatattcgtcttctgagtcttcctctagagttccatattcgtcctcttgggtcctatat 39

                                  
Query: 551 ttgttttctgggctcccatattc 573
           ||| |||||| | ||||||||||
Sbjct: 38  ttgctttctgcgttcccatattc 16



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 500 tcttctgagtctttctctaaagtcctatattcgttctctg 539
           ||||||||||||| ||||||||||| ||||| || |||||
Sbjct: 155 tcttctgagtcttcctctaaagtcccatatttgtcctctg 116



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 682 catattcctcttctgagtctt 702
           |||||||||||||||||||||
Sbjct: 22  catattcctcttctgagtctt 2



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| ||||||||||||||| || |||| | ||||||
Sbjct: 97  catattcgtcttctgagtcttcctctagagttccatattc 58
to top
>gb|AY607079.1| Psathyrostachys lanuginosa voucher H8803 RNA polymerase beta
           subunit (rpoC2) gene, partial cds; chloroplast
          Length = 186

 Score =  297 bits (150), Expect = 3e-77
 Identities = 177/186 (95%)
 Strand = Plus / Minus

                                                                       
Query: 328 ctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtaccata 387
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 186 ctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtcccata 127

                                                                       
Query: 388 tttttcctcgccgctttccccggggctgccatattcgtcttctgagtcttcttctaaagt 447
           ||| |||||  ||||||| |||||||||||||||||||||||||||||||| |||| |||
Sbjct: 126 tttgtcctctgcgctttctccggggctgccatattcgtcttctgagtcttcctctagagt 67

                                                                       
Query: 448 tccatattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctga 507
           ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 66  tccatattcgtcctcttgggtcctatatttgctttctgcgttcccatattcctcttctga 7

                 
Query: 508 gtcttt 513
           ||||||
Sbjct: 6   gtcttt 1



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                       
Query: 491 ccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccatat 550
           |||||||| ||||||||||||| ||||| ||| | |||||||| |||| || ||| ||||
Sbjct: 98  ccatattcgtcttctgagtcttcctctagagttccatattcgtcctcttgggtcctatat 39

                                  
Query: 551 ttgttttctgggctcccatattc 573
           ||| |||||| | ||||||||||
Sbjct: 38  ttgctttctgcgttcccatattc 16



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 500 tcttctgagtctttctctaaagtcctatattcgttctctg 539
           ||||||||||||| ||||||||||| ||||| || |||||
Sbjct: 155 tcttctgagtcttcctctaaagtcccatatttgtcctctg 116



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 682 catattcctcttctgagtctt 702
           |||||||||||||||||||||
Sbjct: 22  catattcctcttctgagtctt 2



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| ||||||||||||||| || |||| | ||||||
Sbjct: 97  catattcgtcttctgagtcttcctctagagttccatattc 58
to top
>gb|AY607078.1| Psathyrostachys lanuginosa voucher H8803 RNA polymerase beta
           subunit (rpoC2) gene, partial cds; chloroplast
          Length = 186

 Score =  297 bits (150), Expect = 3e-77
 Identities = 177/186 (95%)
 Strand = Plus / Minus

                                                                       
Query: 328 ctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtaccata 387
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 186 ctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtcccata 127

                                                                       
Query: 388 tttttcctcgccgctttccccggggctgccatattcgtcttctgagtcttcttctaaagt 447
           ||| |||||  ||||||| |||||||||||||||||||||||||||||||| |||| |||
Sbjct: 126 tttgtcctctgcgctttctccggggctgccatattcgtcttctgagtcttcctctagagt 67

                                                                       
Query: 448 tccatattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctga 507
           ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 66  tccatattcgtcctcttgggtcctatatttgctttctgcgttcccatattcctcttctga 7

                 
Query: 508 gtcttt 513
           ||||||
Sbjct: 6   gtcttt 1



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                       
Query: 491 ccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccatat 550
           |||||||| ||||||||||||| ||||| ||| | |||||||| |||| || ||| ||||
Sbjct: 98  ccatattcgtcttctgagtcttcctctagagttccatattcgtcctcttgggtcctatat 39

                                  
Query: 551 ttgttttctgggctcccatattc 573
           ||| |||||| | ||||||||||
Sbjct: 38  ttgctttctgcgttcccatattc 16



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 500 tcttctgagtctttctctaaagtcctatattcgttctctg 539
           ||||||||||||| ||||||||||| ||||| || |||||
Sbjct: 155 tcttctgagtcttcctctaaagtcccatatttgtcctctg 116



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 682 catattcctcttctgagtctt 702
           |||||||||||||||||||||
Sbjct: 22  catattcctcttctgagtctt 2



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| ||||||||||||||| || |||| | ||||||
Sbjct: 97  catattcgtcttctgagtcttcctctagagttccatattc 58
to top
>gb|AY607076.1| Psathyrostachys juncea voucher H7544 RNA polymerase beta subunit
           (rpoC2) gene, partial cds; chloroplast
          Length = 186

 Score =  297 bits (150), Expect = 3e-77
 Identities = 177/186 (95%)
 Strand = Plus / Minus

                                                                       
Query: 328 ctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtaccata 387
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 186 ctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtcccata 127

                                                                       
Query: 388 tttttcctcgccgctttccccggggctgccatattcgtcttctgagtcttcttctaaagt 447
           ||| |||||  ||||||| |||||||||||||||||||||||||||||||| |||| |||
Sbjct: 126 tttgtcctctgcgctttctccggggctgccatattcgtcttctgagtcttcctctagagt 67

                                                                       
Query: 448 tccatattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctga 507
           ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 66  tccatattcgtcctcttgggtcctatatttgctttctgcgttcccatattcctcttctga 7

                 
Query: 508 gtcttt 513
           ||||||
Sbjct: 6   gtcttt 1



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                       
Query: 491 ccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccatat 550
           |||||||| ||||||||||||| ||||| ||| | |||||||| |||| || ||| ||||
Sbjct: 98  ccatattcgtcttctgagtcttcctctagagttccatattcgtcctcttgggtcctatat 39

                                  
Query: 551 ttgttttctgggctcccatattc 573
           ||| |||||| | ||||||||||
Sbjct: 38  ttgctttctgcgttcccatattc 16



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 500 tcttctgagtctttctctaaagtcctatattcgttctctg 539
           ||||||||||||| ||||||||||| ||||| || |||||
Sbjct: 155 tcttctgagtcttcctctaaagtcccatatttgtcctctg 116



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 682 catattcctcttctgagtctt 702
           |||||||||||||||||||||
Sbjct: 22  catattcctcttctgagtctt 2



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| ||||||||||||||| || |||| | ||||||
Sbjct: 97  catattcgtcttctgagtcttcctctagagttccatattc 58
to top
>emb|Z14983.1|CHSBRPO21 S.bicolor chloroplast rpoC2 gene (C2.1)
          Length = 1307

 Score =  291 bits (147), Expect = 2e-75
 Identities = 217/244 (88%), Gaps = 1/244 (0%)
 Strand = Plus / Minus

                                                                        
Query: 133  cttgtattttttgtgagttgtgtatccactccaataatactattgtcaagtatctttagg 192
            |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||
Sbjct: 1302 cttgtattttttgtgagttgtgtatcgactccaataatactattgtcaagtacctttagg 1243

                                                                        
Query: 193  gatgaagatctcggcaagatatgaagttcttgaagaatgnnnnnnnnnccgatctacttc 252
            ||||| ||||||||||||||||| |||||||||||||||         ||||||||||||
Sbjct: 1242 gatgaggatctcggcaagatatgcagttcttgaagaatgaaaaaaaa-ccgatctacttc 1184

                                                                        
Query: 253  tttttggtattttagactaaattcttttgttcctcgatgctcaatcaaaccctcnnnnnn 312
            ||||||||||||||||||||||||||||||||||||||||||||| ||||||||      
Sbjct: 1183 tttttggtattttagactaaattcttttgttcctcgatgctcaataaaaccctctttttt 1124

                                                                        
Query: 313  naagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttc 372
             ||||| ||||||||||| |||||| | |||||||| ||||||||||| |||||||||||
Sbjct: 1123 taagatagaatcttcctccgggctcccatattcgtcttctgagtcttcctctgagtcttc 1064

                
Query: 373  ctct 376
            ||||
Sbjct: 1063 ctct 1060



 Score =  101 bits (51), Expect = 3e-18
 Identities = 81/91 (89%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||||| ||||| || |||||||||| || ||||||||||||||||
Sbjct: 959 cctctcgggtcctatatttgttctctaggctcccatattcttcctctgagtctttctcta 900

                                          
Query: 519 aagtcctatattcgttctctgggttcccata 549
            |||||||||||||| |||| || |||||||
Sbjct: 899 gagtcctatattcgtcctctaggatcccata 869



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 62/70 (88%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||||| |||||||| || ||||||| ||||||||||||| |||| 
Sbjct: 794 cctctcgggtcctatatttgttctctgggctctcatattcgtcttctgagtcttcctctc 735

                     
Query: 519 aagtcctata 528
            |||||||||
Sbjct: 734 gagtcctata 725



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           |||||||||| ||||||||||||||| |||||||||||||
Sbjct: 764 tctcatattcgtcttctgagtcttcctctcgagtcctata 725



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                       
Query: 347  tcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
            |||||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 1077 tcctctgagtcttcctctgagtcttcttctaaagtcccatatt 1035



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattc 666
           ||||||| ||||||||||||||||||| | ||||| |||||
Sbjct: 864 tcttctagggtttcatattcgtcctctagagtcctatattc 824



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 410  gggctgccatattcgtcttctgagtcttc 438
            ||||| |||||||||||||||||||||||
Sbjct: 1104 gggctcccatattcgtcttctgagtcttc 1076



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 428  tctgagtcttcttctaaagttccatattc 456
            |||||||||||||||||||| ||||||||
Sbjct: 1062 tctgagtcttcttctaaagtcccatattc 1034



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| |||||||| |||||||||||
Sbjct: 772 ctctgggctctcatattcgtcttctgagtcttc 740



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                       
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||||||||||||||||| |||  ||| | ||| || |||||| |||||| |||||
Sbjct: 761 catattcgtcttctgagtcttcctctcgagtcctatactcttcctctcgggtccgatatt 702



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 489  tcccatattcctcttctgagtctttctcta 518
            |||||||||| ||||||||||||| |||||
Sbjct: 1010 tcccatattcttcttctgagtcttcctcta 981



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 356  tcttcttctgagtcttcctcta 377
            ||||||||||||||||||||||
Sbjct: 1002 tcttcttctgagtcttcctcta 981



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 489  tcccatattcctcttctgagtctttctct 517
            |||||||||| ||||||||||||| ||||
Sbjct: 1100 tcccatattcgtcttctgagtcttcctct 1072



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctct 463
           |||| |||||||| || ||||||||||  |||| ||| | |||||||||||||
Sbjct: 932 ggctcccatattcttcctctgagtctttctctagagtcctatattcgtcctct 880



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           ||||||| || | ||||||||||||||||||||
Sbjct: 875 tcccatactcatcttctagggtttcatattcgt 843



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 596 tattcgtcttctaggattccatatt 620
           |||||||||||||||||| ||||||
Sbjct: 828 tattcgtcttctaggatttcatatt 804



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| || |||||||||| | || |||||||||||||
Sbjct: 926 catattcttcctctgagtctttctctagagtcctatattc 887



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 864 tcttctagggtttcatattcgtcctctagagtcctatatt 825



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 568 atattcgttttctagggtttcatattcg 595
           |||||||| ||||||| |||||||||||
Sbjct: 829 atattcgtcttctaggatttcatattcg 802
to top
>emb|Z14984.1|CHSBRPO22 S.bicolor chloroplast rpoC2 gene (C2.2)
          Length = 1142

 Score =  291 bits (147), Expect = 2e-75
 Identities = 217/244 (88%), Gaps = 1/244 (0%)
 Strand = Plus / Minus

                                                                        
Query: 133  cttgtattttttgtgagttgtgtatccactccaataatactattgtcaagtatctttagg 192
            |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||
Sbjct: 1137 cttgtattttttgtgagttgtgtatcgactccaataatactattgtcaagtacctttagg 1078

                                                                        
Query: 193  gatgaagatctcggcaagatatgaagttcttgaagaatgnnnnnnnnnccgatctacttc 252
            ||||| ||||||||||||||||| |||||||||||||||         ||||||||||||
Sbjct: 1077 gatgaggatctcggcaagatatgcagttcttgaagaatgaaaaaaaa-ccgatctacttc 1019

                                                                        
Query: 253  tttttggtattttagactaaattcttttgttcctcgatgctcaatcaaaccctcnnnnnn 312
            ||||||||||||||||||||||||||||||||||||||||||||| ||||||||      
Sbjct: 1018 tttttggtattttagactaaattcttttgttcctcgatgctcaataaaaccctctttttt 959

                                                                        
Query: 313  naagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttc 372
             ||||| ||||||||||| |||||| | |||||||| ||||||||||| |||||||||||
Sbjct: 958  taagatagaatcttcctccgggctcccatattcgtcttctgagtcttcctctgagtcttc 899

                
Query: 373  ctct 376
            ||||
Sbjct: 898  ctct 895



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 62/70 (88%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||||| |||||||| || ||||||| ||||||||||||| |||| 
Sbjct: 794 cctctcgggtcctatatttgttctctgggctctcatattcgtcttctgagtcttcctctc 735

                     
Query: 519 aagtcctata 528
            |||||||||
Sbjct: 734 gagtcctata 725



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           |||||||||| ||||||||||||||| |||||||||||||
Sbjct: 764 tctcatattcgtcttctgagtcttcctctcgagtcctata 725



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                      
Query: 347 tcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           |||||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 912 tcctctgagtcttcctctgagtcttcttctaaagtcccatatt 870



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| |||||||||||||||||||||||
Sbjct: 939 gggctcccatattcgtcttctgagtcttc 911



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 897 tctgagtcttcttctaaagtcccatattc 869



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| |||||||| |||||||||||
Sbjct: 772 ctctgggctctcatattcgtcttctgagtcttc 740



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                       
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||||||||||||||||| |||  ||| | ||| || |||||| |||||| |||||
Sbjct: 761 catattcgtcttctgagtcttcctctcgagtcctatactcttcctctcgggtccgatatt 702



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 489 tcccatattcctcttctgagtctttctcta 518
           |||||||||| ||||||||||||| |||||
Sbjct: 845 tcccatattcttcttctgagtcttcctcta 816



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 356 tcttcttctgagtcttcctcta 377
           ||||||||||||||||||||||
Sbjct: 837 tcttcttctgagtcttcctcta 816



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 489 tcccatattcctcttctgagtctttctct 517
           |||||||||| ||||||||||||| ||||
Sbjct: 935 tcccatattcgtcttctgagtcttcctct 907
to top
>gb|U90824.1|BVU90824 Bambusa vulgaris RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 476

 Score =  291 bits (147), Expect = 2e-75
 Identities = 249/283 (87%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 475 aagatggaatcttcctctgggctcccgtattcgtcctctgagtcttcttctgagtcttcc 416

                                                                       
Query: 374 tctaaagtaccatatttttcctcgccgctttccccggggctgccatattcgtcttctgag 433
           |||||||| |||||||  |||||   || |||| | ||||| ||||||||||||||||||
Sbjct: 415 tctaaagtcccatattcgtcctctgagccttcctccgggctcccatattcgtcttctgag 356

                                                                       
Query: 434 tcttcttctaaagttccatattcgtcctcttgggtcctatatttgctctctgggttccca 493
           ||||| |||| ||||||||||||||||||| |||||||||||||| |||||||| |||||
Sbjct: 355 tcttcatctagagttccatattcgtcctctcgggtcctatatttgttctctgggctccca 296

                                                                       
Query: 494 tattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccatatttg 553
           ||||| || |||||||||| ||||  ||||||||||||||  ||| || |  |||||| |
Sbjct: 295 tattcgtcctctgagtcttcctctcgagtcctatattcgtcttctagggtttcatattcg 236

                                                      
Query: 554 ttttctgggctcccatattcgttttctagggtttcatattcgt 596
           |  ||| || |||||||||| | ||||||||||||||||||||
Sbjct: 235 tcctctaggatcccatattcatcttctagggtttcatattcgt 193



 Score =  105 bits (53), Expect = 2e-19
 Identities = 86/97 (88%)
 Strand = Plus / Minus

                                                                       
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatttgctctctgggttcccatat 496
           |||||||  ||| |||||||||||||| |||||||||||||| |||||||| ||||||||
Sbjct: 172 tcttctagggtttcatattcgtcctctcgggtcctatatttgttctctgggctcccatat 113

                                                
Query: 497 tcctcttctgagtctttctctaaagtcctatattcgt 533
           || || |||||||||| ||||  ||||||||||||||
Sbjct: 112 tcgtcctctgagtcttcctctcgagtcctatattcgt 76



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 85/98 (86%), Gaps = 5/98 (5%)
 Strand = Plus / Minus

                                                                       
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctangg--tctca 683
           ||||||| ||||||||||||||||||||||||||| ||||   ||||||  ||  || ||
Sbjct: 172 tcttctagggtttcatattcgtcctctcgggtcctatatt---tgttctctgggctccca 116

                                                 
Query: 684 tattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||| || |||||||||||| ||||||||||||||||
Sbjct: 115 tattcgtcctctgagtcttcctctcgagtcctatattc 78



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 100/121 (82%), Gaps = 10/121 (8%)
 Strand = Plus / Minus

                                                                       
Query: 568 atattcgttttctagggtttcatattcgtattcgtcttctaggattccatatttagattc 627
           |||||||| ||||||||||||||||||||      | |||||||| ||||||| |   ||
Sbjct: 263 atattcgtcttctagggtttcatattcgt------cctctaggatcccatattca---tc 213

                                                                       
Query: 628 ttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcatatt 687
           ||||| ||||||||||||||||||| | ||||| |||| ||| ||||| ||| |||||||
Sbjct: 212 ttctagggtttcatattcgtcctctagagtcctatatt-cgtcttctagggtttcatatt 154

            
Query: 688 c 688
           |
Sbjct: 153 c 153



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 73/85 (85%), Gaps = 5/85 (5%)
 Strand = Plus / Minus

                                                                       
Query: 639 catattcgtcctctcgggtcctgtattccgtgttctanggtctc--atattcctcttctg 696
           |||||||||||||||||||||| ||||   ||||||  || |||  |||||| || ||||
Sbjct: 339 catattcgtcctctcgggtcctatatt---tgttctctgggctcccatattcgtcctctg 283

                                    
Query: 697 agtcttccgctcgagtcctatattc 721
           |||||||| ||||||||||||||||
Sbjct: 282 agtcttcctctcgagtcctatattc 258



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 58/67 (86%)
 Strand = Plus / Minus

                                                                       
Query: 410 gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtc 469
           ||||| ||||||||||| ||||||||||| |||  ||| | ||||||||| ||| |||||
Sbjct: 124 gggctcccatattcgtcctctgagtcttcctctcgagtcctatattcgtcttctagggtc 65

                  
Query: 470 ctatatt 476
           |||||||
Sbjct: 64  ctatatt 58



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                             
Query: 526 atattcgttctctgggttcccatatttgttttctgggctcccatattcgt 575
           |||||||| |||| || ||| ||||||||| |||||||||||||||||||
Sbjct: 158 atattcgtcctctcgggtcctatatttgttctctgggctcccatattcgt 109



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 568 atattcgttttctagggtttcatattcgt 596
           |||||||| ||||||||||||||||||||
Sbjct: 179 atattcgtcttctagggtttcatattcgt 151



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||| | ||||||||||||||||||||
Sbjct: 128 ctctgggctcccatattcgtcctctgagtcttc 96



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 451 atattcgtcctcttgggtcctatat 475
           ||||||||||||| |||||||||||
Sbjct: 62  atattcgtcctctagggtcctatat 38



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 214 tcttctagggtttcatattcgtcctctagagtcctatatt 175
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>gb|AY607077.1| Psathyrostachys stoloniformis voucher H9182 RNA polymerase beta
           subunit (rpoC2) gene, partial cds; chloroplast
          Length = 186

 Score =  289 bits (146), Expect = 6e-75
 Identities = 176/186 (94%)
 Strand = Plus / Minus

                                                                       
Query: 328 ctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtaccata 387
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 186 ctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtcccata 127

                                                                       
Query: 388 tttttcctcgccgctttccccggggctgccatattcgtcttctgagtcttcttctaaagt 447
           ||| |||||  ||||||| |||||||||||||||||||||||||| ||||| |||| |||
Sbjct: 126 tttgtcctctgcgctttctccggggctgccatattcgtcttctgattcttcctctagagt 67

                                                                       
Query: 448 tccatattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctga 507
           ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 66  tccatattcgtcctcttgggtcctatatttgctttctgcgttcccatattcctcttctga 7

                 
Query: 508 gtcttt 513
           ||||||
Sbjct: 6   gtcttt 1



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 500 tcttctgagtctttctctaaagtcctatattcgttctctg 539
           ||||||||||||| ||||||||||| ||||| || |||||
Sbjct: 155 tcttctgagtcttcctctaaagtcccatatttgtcctctg 116



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 682 catattcctcttctgagtctt 702
           |||||||||||||||||||||
Sbjct: 22  catattcctcttctgagtctt 2
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>gb|L25376.1|BZACPRPOC2 Briza maxima chloroplast RNA polymerase beta-subunit (rpoC2) gene,
           partial cds
          Length = 444

 Score =  274 bits (138), Expect = 4e-70
 Identities = 213/238 (89%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           ||||| ||||||||||||||||| || ||||||||||| |||||||||||| ||||||||
Sbjct: 427 aagatagaatcttcctctgggctatcatattcgtcctcggagtcttcttctaagtcttcc 368

                                                                       
Query: 374 tctaaagtaccatatttttcctcgccgctttccccggggctgccatattcgtcttctgag 433
           |||||||| | |||||| |||||   |||||||||| || | ||||||||||||||||||
Sbjct: 367 tctaaagtccgatatttgtcctctgagctttccccgaggttcccatattcgtcttctgag 308

                                                                       
Query: 434 tcttcttctaaagttccatattcgtcctcttgggtcctatatttgctctctgggttccca 493
           ||||| |||| ||||||||||||| ||||| ||||||||||||||||||||||| |||||
Sbjct: 307 tcttcctctagagttccatattcgccctctcgggtcctatatttgctctctgggctccca 248

                                                                     
Query: 494 tattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccatatt 551
           ||||| |||||| |||||||||| ||||||||||||||||||||| || | |||||||
Sbjct: 247 tattcgtcttctaagtctttctcgaaagtcctatattcgttctctaggctgccatatt 190



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 83/96 (86%)
 Strand = Plus / Minus

                                                                       
Query: 486 ggttcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcc 545
           ||||||||||||| ||||||||||||| ||||| ||| | |||||||  |||| || |||
Sbjct: 330 ggttcccatattcgtcttctgagtcttcctctagagttccatattcgccctctcgggtcc 271

                                               
Query: 546 catatttgttttctgggctcccatattcgttttcta 581
            ||||||| | ||||||||||||||||||| |||||
Sbjct: 270 tatatttgctctctgggctcccatattcgtcttcta 235



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 72/81 (88%), Gaps = 1/81 (1%)
 Strand = Plus / Minus

                                                                       
Query: 641 tattcgtcctctcgggtcctgtattccgtgttctanggtctcatattcctcttctgagtc 700
           ||||||||||||||| |||| ||||| || ||||| |||||||||||| | |||| ||||
Sbjct: 166 tattcgtcctctcggttcctatattc-gtcttctagggtctcatattcatattctaagtc 108

                                
Query: 701 ttccgctcgagtcctatattc 721
           |||| ||||||||||||||||
Sbjct: 107 ttcctctcgagtcctatattc 87



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 52/57 (91%)
 Strand = Plus / Minus

                                                                    
Query: 547 atatttgttttctgggctcccatattcgttttctagggtttcatattcgtattcgtc 603
           ||||| ||| ||| |||| |||||||||| |||||||||||||||||||||||||||
Sbjct: 215 atattcgttctctaggctgccatattcgtcttctagggtttcatattcgtattcgtc 159



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| ||||||||||||||| || |||| | ||||||
Sbjct: 324 catattcgtcttctgagtcttcctctagagttccatattc 285



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 411 ggctgccatattcgtcttct 430
           ||||||||||||||||||||
Sbjct: 201 ggctgccatattcgtcttct 182



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 65/80 (81%)
 Strand = Plus / Minus

                                                                       
Query: 452 tattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtct 511
           |||||||||||| || ||||||||| |   ||| || || ||||||| | |||| |||||
Sbjct: 166 tattcgtcctctcggttcctatattcgtcttctagggtctcatattcatattctaagtct 107

                               
Query: 512 ttctctaaagtcctatattc 531
           | ||||  ||||||||||||
Sbjct: 106 tcctctcgagtcctatattc 87
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>gb|AF372167.1| Danthoniopsis dinteri DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 584

 Score =  266 bits (134), Expect = 9e-68
 Identities = 265/311 (85%)
 Strand = Plus / Minus

                                                                       
Query: 241 ccgatctacttctttttggtattttagactaaattcttttgttcctcgatgctcaatcaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 573 ccgatctacttctttttggtattttagactaaattcttttgttcctcgatgctcaataaa 514

                                                                       
Query: 301 accctcnnnnnnnaagatggaatcttcctctgggctctcgtattcgtcctctgagtcttc 360
           ||||||       ||||| |||||||||||||||||| | |||||||| ||||| |||||
Sbjct: 513 accctctttttttaagatagaatcttcctctgggctcccatattcgtcttctgaatcttc 454

                                                                       
Query: 361 ttctgagtcttcctctaaagtaccatatttttcctcgccgctttccccggggctgccata 420
            ||||||||||| ||||||||  ||||||  | |||   ||  ||  | ||||| |||||
Sbjct: 453 ctctgagtcttcttctaaagtctcatattcgttctctgagccgtcttcagggctcccata 394

                                                                       
Query: 421 ttcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatttgct 480
           |||||||||||||||||| |||| ||||||||||||||||||| ||||| |||||| | |
Sbjct: 393 ttcgtcttctgagtcttcctctagagttccatattcgtcctctcgggtcttatattcgtt 334

                                                                       
Query: 481 ctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgg 540
           |||| || |||| ||||| || |||||||||||||||| | |||||||||||| |||| |
Sbjct: 333 ctctaggctcccgtattcttcctctgagtctttctctagaatcctatattcgtcctctag 274

                      
Query: 541 gttcccatatt 551
           | || ||||||
Sbjct: 273 gatctcatatt 263



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 78/93 (83%), Gaps = 1/93 (1%)
 Strand = Plus / Minus

                                                                       
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
           ||||||| ||||||||||||| ||||||||||||| |||| |||  |||  | ||| |||
Sbjct: 218 tcttctagggtttcatattcgccctctcgggtcctatatt-cgttctctgggctcttata 160

                                            
Query: 686 ttcctcttctgagtcttccgctcgagtcctata 718
           ||| |  |||||||||||| | |||||||||||
Sbjct: 159 ttcgtactctgagtcttcctcccgagtcctata 127



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 71/85 (83%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| ||||||||||||| ||||| ||| | |||||||| |||| || ||  ||
Sbjct: 400 tcccatattcgtcttctgagtcttcctctagagttccatattcgtcctctcgggtcttat 341

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| ||| ||||||| |||||
Sbjct: 340 attcgttctctaggctcccgtattc 316



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 54/63 (85%), Gaps = 1/63 (1%)
 Strand = Plus / Minus

                                                                       
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
           ||||||| ||||||||||||||||||| |  |||| |||| ||| ||||| ||| |||||
Sbjct: 260 tcttctagggtttcatattcgtcctctagaatcctatatt-cgtcttctagggtttcata 202

              
Query: 686 ttc 688
           |||
Sbjct: 201 ttc 199



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 568 atattcgttttctagggtttcatattcg 595
           |||||||| |||||||||||||||||||
Sbjct: 225 atattcgtcttctagggtttcatattcg 198



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 63/76 (82%)
 Strand = Plus / Minus

                                                                       
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatttgctctctgggttcccatat 496
           |||||||  ||| |||||||| ||||| |||||||||||| | |||||||| ||  ||||
Sbjct: 218 tcttctagggtttcatattcgccctctcgggtcctatattcgttctctgggctcttatat 159

                           
Query: 497 tcctcttctgagtctt 512
           || |  ||||||||||
Sbjct: 158 tcgtactctgagtctt 143



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 567 catattcgttttctagggtttcatattcgt 596
           ||||||| | ||||||||||||||||||||
Sbjct: 268 catattcatcttctagggtttcatattcgt 239



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 521 gtcctatattcgttctctggg 541
           |||||||||||||||||||||
Sbjct: 188 gtcctatattcgttctctggg 168



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||  ||||||| ||||||||||||
Sbjct: 174 ctctgggctcttatattcgtactctgagtcttc 142



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 557 tctgggctcccatattcgttttct 580
           ||||||||||||||||||| ||||
Sbjct: 485 tctgggctcccatattcgtcttct 462



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| ||||||||||||||| || |||| | ||||||
Sbjct: 397 catattcgtcttctgagtcttcctctagagttccatattc 358



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 364 catattcgtcctctcgggtc 345
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  254 bits (128), Expect = 4e-64
 Identities = 225/261 (86%), Gaps = 1/261 (0%)
 Strand = Plus / Plus

                                                                            
Query: 100      ctcttcactcggaccagtccgcctagtccacttcttgtattttttgtgagttgtgtatcc 159
                ||||||||||| |||| ||| || || | ||||||||| |||||||||||||||||||||
Sbjct: 19760928 ctcttcactcgaaccaatccacccagccgacttcttgtgttttttgtgagttgtgtatcc 19760987

                                                                            
Query: 160      actccaataatactattgtcaagtatctttagggatgaagatctcggcaagatatgaagt 219
                ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||
Sbjct: 19760988 actccaataatactattgtcaagtacctttagggatgaggatctcggcaagatatgcagt 19761047

                                                                            
Query: 220      tcttgaagaatgnnnnnnnnnccgatctacttctttttggtattttagactaaattcttt 279
                ||||| ||||||         |||||||||||||||||||||||||||||||||||||||
Sbjct: 19761048 tcttggagaatg-aaaaaaaaccgatctacttctttttggtattttagactaaattcttt 19761106

                                                                            
Query: 280      tgttcctcgatgctcaatcaaaccctcnnnnnnnaagatggaatcttcctctgggctctc 339
                |||||||||||||| ||||||| || |       |||| |||||||||||| ||| || |
Sbjct: 19761107 tgttcctcgatgcttaatcaaaacccccttttttaagacggaatcttcctccgggttccc 19761166

                                     
Query: 340      gtattcgtcctctgagtcttc 360
                 ||||||| ||||||||||||
Sbjct: 19761167 atattcgttctctgagtcttc 19761187



 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 45/47 (95%)
 Strand = Plus / Minus

                                                               
Query: 45       ttcaggaaaatgaatatctccggaaaatattttgagttccgtatggc 91
                ||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 25996680 ttcaggaaaatgaatatctccagaaaatatttttagttccgtatggc 25996634



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 111/136 (81%)
 Strand = Plus / Plus

                                                                            
Query: 416      ccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
                |||| |||||| | ||||||||| |||||||| |||||||  |||||| ||  |||||||
Sbjct: 19761198 ccatgttcgtcctttgagtcttcctctaaagtgccatatttatcctctcggtgcctatat 19761257

                                                                            
Query: 476      ttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttc 535
                ||| |||||||  |||||||||| || || || || | ||||  |||||||||||||| |
Sbjct: 19761258 ttgttctctggactcccatattcgtcctcggattcctcctctcgagtcctatattcgtcc 19761317

                                
Query: 536      tctgggttcccatatt 551
                ||| || | |||||||
Sbjct: 19761318 tctaggattccatatt 19761333



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 50/57 (87%), Gaps = 3/57 (5%)
 Strand = Plus / Plus

                                                                         
Query: 596      tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctct 652
                |||||||| |||||||||||||||| |   ||||||| |||||||||||||| ||||
Sbjct: 19761309 tattcgtcctctaggattccatattca---tcttctagggtttcatattcgttctct 19761362



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                            
Query: 505      tgagtctttctctaaagtcctatattcgttctctgggttcccatatttgttttctgggct 564
                |||||||| ||||||||| | |||||  | |||| ||| || ||||||||| ||||| ||
Sbjct: 19761212 tgagtcttcctctaaagtgccatatttatcctctcggtgcctatatttgttctctggact 19761271

                           
Query: 565      cccatattcgt 575
                |||||||||||
Sbjct: 19761272 cccatattcgt 19761282



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                              
Query: 416      ccatattcgtcttctgagtcttcttctaaagttccatattcgtcct 461
                ||||||||||  ||||||||||| |||||||| |||| ||||||||
Sbjct: 19761165 ccatattcgttctctgagtcttcctctaaagtcccatgttcgtcct 19761210



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                                 
Query: 364      tgagtcttcctctaaagtaccatatttttcctc 396
                |||||||||||||||||| |||||||| |||||
Sbjct: 19761212 tgagtcttcctctaaagtgccatatttatcctc 19761244



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                                 
Query: 485      gggttcccatattcctcttctgagtctttctctaaagtcctatattcgt 533
                |||||||||||||| |  |||||||||| ||||||||||| || |||||
Sbjct: 19761159 gggttcccatattcgttctctgagtcttcctctaaagtcccatgttcgt 19761207



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 329      tctgggctctcgtattcgtcctctgagtctt 359
                ||||||||| ||||||||| |||||||||||
Sbjct: 19761462 tctgggctcccgtattcgttctctgagtctt 19761492



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 566      ccatattcgttttctagggtttcatattcgt 596
                |||||||| | ||||||||||||||||||||
Sbjct: 19761327 ccatattcatcttctagggtttcatattcgt 19761357



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 547      atatttgttttctgggctcccatattcgtt 576
                ||||| ||||||||||||||| ||||||||
Sbjct: 19761452 atattcgttttctgggctcccgtattcgtt 19761481



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 71/86 (82%), Gaps = 1/86 (1%)
 Strand = Plus / Plus

                                                                            
Query: 453      attcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctt 512
                |||| ||||||  ||||||||||| | | |||||| |||| ||||| |  ||||||||||
Sbjct: 19761433 attcttcctctctggtcctatattcgttttctgggctcccgtattcgttctctgagtctt 19761492

                                          
Query: 513      tctctaaagtcctatattcgttctct 538
                |||||  ||| |||||||||| ||||
Sbjct: 19761493 tctctcgagt-ctatattcgtcctct 19761517



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 526      atattcgttctctgggttcccatatt 551
                |||||||||||||||| |||||||||
Sbjct: 19761350 atattcgttctctgggatcccatatt 19761375



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                          
Query: 546      catatttgttttctgggctcccatattcgttttctagggttt 587
                |||||| ||| |||||| |||||||||| | |||||||||||
Sbjct: 19761349 catattcgttctctgggatcccatattcatcttctagggttt 19761390



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 129      acttcttgtattttttgtgagttgt 153
                |||||||||||||||||||| ||||
Sbjct: 21052815 acttcttgtattttttgtgacttgt 21052839



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 451      atattcgtcctcttgggtcctatat 475
                ||||||||||||| |||||||||||
Sbjct: 19761505 atattcgtcctctagggtcctatat 19761529



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 362      tctgagtcttcctctaaagtaccat 386
                |||||||||||||||||||| ||||
Sbjct: 19761177 tctgagtcttcctctaaagtcccat 19761201



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                        
Query: 521      gtcctatattcgttctctgggttcccatatttgttttctg 560
                |||||||||||||| |||||| |||| |||| ||| ||||
Sbjct: 19761447 gtcctatattcgttttctgggctcccgtattcgttctctg 19761486
to top
>gb|AC084831.6| Oryza sativa chromosome 3 BAC OSJNBa0077G22 genomic sequence, complete
             sequence
          Length = 167288

 Score =  254 bits (128), Expect = 4e-64
 Identities = 225/261 (86%), Gaps = 1/261 (0%)
 Strand = Plus / Minus

                                                                         
Query: 100   ctcttcactcggaccagtccgcctagtccacttcttgtattttttgtgagttgtgtatcc 159
             ||||||||||| |||| ||| || || | ||||||||| |||||||||||||||||||||
Sbjct: 53888 ctcttcactcgaaccaatccacccagccgacttcttgtgttttttgtgagttgtgtatcc 53829

                                                                         
Query: 160   actccaataatactattgtcaagtatctttagggatgaagatctcggcaagatatgaagt 219
             ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||
Sbjct: 53828 actccaataatactattgtcaagtacctttagggatgaggatctcggcaagatatgcagt 53769

                                                                         
Query: 220   tcttgaagaatgnnnnnnnnnccgatctacttctttttggtattttagactaaattcttt 279
             ||||| ||||||         |||||||||||||||||||||||||||||||||||||||
Sbjct: 53768 tcttggagaatg-aaaaaaaaccgatctacttctttttggtattttagactaaattcttt 53710

                                                                         
Query: 280   tgttcctcgatgctcaatcaaaccctcnnnnnnnaagatggaatcttcctctgggctctc 339
             |||||||||||||| ||||||| || |       |||| |||||||||||| ||| || |
Sbjct: 53709 tgttcctcgatgcttaatcaaaacccccttttttaagacggaatcttcctccgggttccc 53650

                                  
Query: 340   gtattcgtcctctgagtcttc 360
              ||||||| ||||||||||||
Sbjct: 53649 atattcgttctctgagtcttc 53629



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 111/136 (81%)
 Strand = Plus / Minus

                                                                         
Query: 416   ccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
             |||| |||||| | ||||||||| |||||||| |||||||  |||||| ||  |||||||
Sbjct: 53618 ccatgttcgtcctttgagtcttcctctaaagtgccatatttatcctctcggtgcctatat 53559

                                                                         
Query: 476   ttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttc 535
             ||| |||||||  |||||||||| || || || || | ||||  |||||||||||||| |
Sbjct: 53558 ttgttctctggactcccatattcgtcctcggattcctcctctcgagtcctatattcgtcc 53499

                             
Query: 536   tctgggttcccatatt 551
             ||| || | |||||||
Sbjct: 53498 tctaggattccatatt 53483



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 50/57 (87%), Gaps = 3/57 (5%)
 Strand = Plus / Minus

                                                                      
Query: 596   tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctct 652
             |||||||| |||||||||||||||| |   ||||||| |||||||||||||| ||||
Sbjct: 53507 tattcgtcctctaggattccatattca---tcttctagggtttcatattcgttctct 53454



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 60/71 (84%)
 Strand = Plus / Minus

                                                                         
Query: 505   tgagtctttctctaaagtcctatattcgttctctgggttcccatatttgttttctgggct 564
             |||||||| ||||||||| | |||||  | |||| ||| || ||||||||| ||||| ||
Sbjct: 53604 tgagtcttcctctaaagtgccatatttatcctctcggtgcctatatttgttctctggact 53545

                        
Query: 565   cccatattcgt 575
             |||||||||||
Sbjct: 53544 cccatattcgt 53534



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                           
Query: 416   ccatattcgtcttctgagtcttcttctaaagttccatattcgtcct 461
             ||||||||||  ||||||||||| |||||||| |||| ||||||||
Sbjct: 53651 ccatattcgttctctgagtcttcctctaaagtcccatgttcgtcct 53606



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                              
Query: 485   gggttcccatattcctcttctgagtctttctctaaagtcctatattcgt 533
             |||||||||||||| |  |||||||||| ||||||||||| || |||||
Sbjct: 53657 gggttcccatattcgttctctgagtcttcctctaaagtcccatgttcgt 53609



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                              
Query: 364   tgagtcttcctctaaagtaccatatttttcctc 396
             |||||||||||||||||| |||||||| |||||
Sbjct: 53604 tgagtcttcctctaaagtgccatatttatcctc 53572



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 566   ccatattcgttttctagggtttcatattcgt 596
             |||||||| | ||||||||||||||||||||
Sbjct: 53489 ccatattcatcttctagggtttcatattcgt 53459



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 329   tctgggctctcgtattcgtcctctgagtctt 359
             ||||||||| ||||||||| |||||||||||
Sbjct: 53354 tctgggctcccgtattcgttctctgagtctt 53324



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 526   atattcgttctctgggttcccatatt 551
             |||||||||||||||| |||||||||
Sbjct: 53466 atattcgttctctgggatcccatatt 53441



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 546   catatttgttttctgggctcccatattcgttttctagggttt 587
             |||||| ||| |||||| |||||||||| | |||||||||||
Sbjct: 53467 catattcgttctctgggatcccatattcatcttctagggttt 53426



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 547   atatttgttttctgggctcccatattcgtt 576
             ||||| ||||||||||||||| ||||||||
Sbjct: 53364 atattcgttttctgggctcccgtattcgtt 53335



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 71/86 (82%), Gaps = 1/86 (1%)
 Strand = Plus / Minus

                                                                         
Query: 453   attcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctt 512
             |||| ||||||  ||||||||||| | | |||||| |||| ||||| |  ||||||||||
Sbjct: 53383 attcttcctctctggtcctatattcgttttctgggctcccgtattcgttctctgagtctt 53324

                                       
Query: 513   tctctaaagtcctatattcgttctct 538
             |||||  ||| |||||||||| ||||
Sbjct: 53323 tctctcgagt-ctatattcgtcctct 53299



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 362   tctgagtcttcctctaaagtaccat 386
             |||||||||||||||||||| ||||
Sbjct: 53639 tctgagtcttcctctaaagtcccat 53615



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 451   atattcgtcctcttgggtcctatat 475
             ||||||||||||| |||||||||||
Sbjct: 53311 atattcgtcctctagggtcctatat 53287



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 521   gtcctatattcgttctctgggttcccatatttgttttctg 560
             |||||||||||||| |||||| |||| |||| ||| ||||
Sbjct: 53369 gtcctatattcgttttctgggctcccgtattcgttctctg 53330
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  254 bits (128), Expect = 4e-64
 Identities = 225/261 (86%), Gaps = 1/261 (0%)
 Strand = Plus / Plus

                                                                            
Query: 100      ctcttcactcggaccagtccgcctagtccacttcttgtattttttgtgagttgtgtatcc 159
                ||||||||||| |||| ||| || || | ||||||||| |||||||||||||||||||||
Sbjct: 19753955 ctcttcactcgaaccaatccacccagccgacttcttgtgttttttgtgagttgtgtatcc 19754014

                                                                            
Query: 160      actccaataatactattgtcaagtatctttagggatgaagatctcggcaagatatgaagt 219
                ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||
Sbjct: 19754015 actccaataatactattgtcaagtacctttagggatgaggatctcggcaagatatgcagt 19754074

                                                                            
Query: 220      tcttgaagaatgnnnnnnnnnccgatctacttctttttggtattttagactaaattcttt 279
                ||||| ||||||         |||||||||||||||||||||||||||||||||||||||
Sbjct: 19754075 tcttggagaatg-aaaaaaaaccgatctacttctttttggtattttagactaaattcttt 19754133

                                                                            
Query: 280      tgttcctcgatgctcaatcaaaccctcnnnnnnnaagatggaatcttcctctgggctctc 339
                |||||||||||||| ||||||| || |       |||| |||||||||||| ||| || |
Sbjct: 19754134 tgttcctcgatgcttaatcaaaacccccttttttaagacggaatcttcctccgggttccc 19754193

                                     
Query: 340      gtattcgtcctctgagtcttc 360
                 ||||||| ||||||||||||
Sbjct: 19754194 atattcgttctctgagtcttc 19754214



 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 45/47 (95%)
 Strand = Plus / Minus

                                                               
Query: 45       ttcaggaaaatgaatatctccggaaaatattttgagttccgtatggc 91
                ||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 26087989 ttcaggaaaatgaatatctccagaaaatatttttagttccgtatggc 26087943



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 111/136 (81%)
 Strand = Plus / Plus

                                                                            
Query: 416      ccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
                |||| |||||| | ||||||||| |||||||| |||||||  |||||| ||  |||||||
Sbjct: 19754225 ccatgttcgtcctttgagtcttcctctaaagtgccatatttatcctctcggtgcctatat 19754284

                                                                            
Query: 476      ttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttc 535
                ||| |||||||  |||||||||| || || || || | ||||  |||||||||||||| |
Sbjct: 19754285 ttgttctctggactcccatattcgtcctcggattcctcctctcgagtcctatattcgtcc 19754344

                                
Query: 536      tctgggttcccatatt 551
                ||| || | |||||||
Sbjct: 19754345 tctaggattccatatt 19754360



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 50/57 (87%), Gaps = 3/57 (5%)
 Strand = Plus / Plus

                                                                         
Query: 596      tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctct 652
                |||||||| |||||||||||||||| |   ||||||| |||||||||||||| ||||
Sbjct: 19754336 tattcgtcctctaggattccatattca---tcttctagggtttcatattcgttctct 19754389



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                            
Query: 505      tgagtctttctctaaagtcctatattcgttctctgggttcccatatttgttttctgggct 564
                |||||||| ||||||||| | |||||  | |||| ||| || ||||||||| ||||| ||
Sbjct: 19754239 tgagtcttcctctaaagtgccatatttatcctctcggtgcctatatttgttctctggact 19754298

                           
Query: 565      cccatattcgt 575
                |||||||||||
Sbjct: 19754299 cccatattcgt 19754309



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                              
Query: 416      ccatattcgtcttctgagtcttcttctaaagttccatattcgtcct 461
                ||||||||||  ||||||||||| |||||||| |||| ||||||||
Sbjct: 19754192 ccatattcgttctctgagtcttcctctaaagtcccatgttcgtcct 19754237



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                                 
Query: 364      tgagtcttcctctaaagtaccatatttttcctc 396
                |||||||||||||||||| |||||||| |||||
Sbjct: 19754239 tgagtcttcctctaaagtgccatatttatcctc 19754271



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                                 
Query: 485      gggttcccatattcctcttctgagtctttctctaaagtcctatattcgt 533
                |||||||||||||| |  |||||||||| ||||||||||| || |||||
Sbjct: 19754186 gggttcccatattcgttctctgagtcttcctctaaagtcccatgttcgt 19754234



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 329      tctgggctctcgtattcgtcctctgagtctt 359
                ||||||||| ||||||||| |||||||||||
Sbjct: 19754489 tctgggctcccgtattcgttctctgagtctt 19754519



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 566      ccatattcgttttctagggtttcatattcgt 596
                |||||||| | ||||||||||||||||||||
Sbjct: 19754354 ccatattcatcttctagggtttcatattcgt 19754384



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 547      atatttgttttctgggctcccatattcgtt 576
                ||||| ||||||||||||||| ||||||||
Sbjct: 19754479 atattcgttttctgggctcccgtattcgtt 19754508



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 71/86 (82%), Gaps = 1/86 (1%)
 Strand = Plus / Plus

                                                                            
Query: 453      attcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctt 512
                |||| ||||||  ||||||||||| | | |||||| |||| ||||| |  ||||||||||
Sbjct: 19754460 attcttcctctctggtcctatattcgttttctgggctcccgtattcgttctctgagtctt 19754519

                                          
Query: 513      tctctaaagtcctatattcgttctct 538
                |||||  ||| |||||||||| ||||
Sbjct: 19754520 tctctcgagt-ctatattcgtcctct 19754544



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 526      atattcgttctctgggttcccatatt 551
                |||||||||||||||| |||||||||
Sbjct: 19754377 atattcgttctctgggatcccatatt 19754402



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                          
Query: 546      catatttgttttctgggctcccatattcgttttctagggttt 587
                |||||| ||| |||||| |||||||||| | |||||||||||
Sbjct: 19754376 catattcgttctctgggatcccatattcatcttctagggttt 19754417



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 129      acttcttgtattttttgtgagttgt 153
                |||||||||||||||||||| ||||
Sbjct: 21045844 acttcttgtattttttgtgacttgt 21045868



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 451      atattcgtcctcttgggtcctatat 475
                ||||||||||||| |||||||||||
Sbjct: 19754532 atattcgtcctctagggtcctatat 19754556



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 362      tctgagtcttcctctaaagtaccat 386
                |||||||||||||||||||| ||||
Sbjct: 19754204 tctgagtcttcctctaaagtcccat 19754228



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                        
Query: 521      gtcctatattcgttctctgggttcccatatttgttttctg 560
                |||||||||||||| |||||| |||| |||| ||| ||||
Sbjct: 19754474 gtcctatattcgttttctgggctcccgtattcgttctctg 19754513
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>gb|AY174500.1| Tristachya leucothrix DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 603

 Score =  250 bits (126), Expect = 5e-63
 Identities = 263/311 (84%)
 Strand = Plus / Minus

                                                                       
Query: 241 ccgatctacttctttttggtattttagactaaattcttttgttcctcgatgctcaatcaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 573 ccgatctacttctttttggtattttagactaaattcttttgttcctcgatgctcaataaa 514

                                                                       
Query: 301 accctcnnnnnnnaagatggaatcttcctctgggctctcgtattcgtcctctgagtcttc 360
           ||||||       ||||| |||||||||||||||||| | |||||||| ||||| |||||
Sbjct: 513 accctctttttttaagatagaatcttcctctgggctcccatattcgtcttctgaatcttc 454

                                                                       
Query: 361 ttctgagtcttcctctaaagtaccatatttttcctcgccgctttccccggggctgccata 420
            || |||||||| ||||||||  ||||||  | |||   ||  ||  | ||||| |||||
Sbjct: 453 ctccgagtcttcttctaaagtctcatattcgttctctgagccgtcttcagggctcccata 394

                                                                       
Query: 421 ttcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatttgct 480
           | |||||||||||||||| |||| ||||||||||||||||||| ||||  |||||| | |
Sbjct: 393 tccgtcttctgagtcttcctctagagttccatattcgtcctctcgggttttatattcgtt 334

                                                                       
Query: 481 ctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgg 540
           |||| || |||| ||||| || |||||||||||||||| |||||||||||||| |||| |
Sbjct: 333 ctctaggctcccgtattcttcctctgagtctttctctagagtcctatattcgtcctctag 274

                      
Query: 541 gttcccatatt 551
           | || ||||||
Sbjct: 273 gatctcatatt 263



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 78/93 (83%), Gaps = 1/93 (1%)
 Strand = Plus / Minus

                                                                       
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
           ||||||| ||||||||||||| ||||||||||||| |||| |||  |||  | ||| |||
Sbjct: 218 tcttctagggtttcatattcgccctctcgggtcctatatt-cgttctctgggctcttata 160

                                            
Query: 686 ttcctcttctgagtcttccgctcgagtcctata 718
           ||| |  |||||||||||| | |||||||||||
Sbjct: 159 ttcgtactctgagtcttcctcccgagtcctata 127



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 54/63 (85%), Gaps = 1/63 (1%)
 Strand = Plus / Minus

                                                                       
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
           ||||||| ||||||||||||||||||| |  |||| |||| ||| ||||| ||| |||||
Sbjct: 260 tcttctagggtttcatattcgtcctctagaatcctatatt-cgtcttctagggtttcata 202

              
Query: 686 ttc 688
           |||
Sbjct: 201 ttc 199



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 568 atattcgttttctagggtttcatattcg 595
           |||||||| |||||||||||||||||||
Sbjct: 225 atattcgtcttctagggtttcatattcg 198



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 63/76 (82%)
 Strand = Plus / Minus

                                                                       
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatttgctctctgggttcccatat 496
           |||||||  ||| |||||||| ||||| |||||||||||| | |||||||| ||  ||||
Sbjct: 218 tcttctagggtttcatattcgccctctcgggtcctatattcgttctctgggctcttatat 159

                           
Query: 497 tcctcttctgagtctt 512
           || |  ||||||||||
Sbjct: 158 tcgtactctgagtctt 143



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 567 catattcgttttctagggtttcatattcgt 596
           ||||||| | ||||||||||||||||||||
Sbjct: 268 catattcatcttctagggtttcatattcgt 239



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 521 gtcctatattcgttctctggg 541
           |||||||||||||||||||||
Sbjct: 188 gtcctatattcgttctctggg 168



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||  ||||||| ||||||||||||
Sbjct: 174 ctctgggctcttatattcgtactctgagtcttc 142



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 557 tctgggctcccatattcgttttct 580
           ||||||||||||||||||| ||||
Sbjct: 485 tctgggctcccatattcgtcttct 462
to top
>gb|U92264.1|ADU92264 Arundo donax RNA polymerase beta-subunit (rpoC2) gene, chloroplast
           gene encoding chloroplast protein, partial cds
          Length = 444

 Score =  214 bits (108), Expect = 3e-52
 Identities = 231/272 (84%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           ||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||| 
Sbjct: 432 aagatagaatcttcctctgggctcccatattcgtcctctgagtcttcttctgagtcttct 373

                                                                       
Query: 374 tctaaagtaccatatttttcctcgccgctttccccggggctgccatattcgtcttctgag 433
           |||||||| |||||||  | |||   ||  ||  | ||||| |||||||| |||||||||
Sbjct: 372 tctaaagtcccatattcgttctctgagccatcttcagggctcccatattcttcttctgag 313

                                                                       
Query: 434 tcttcttctaaagttccatattcgtcctcttgggtcctatatttgctctctgggttccca 493
           ||||  |||| ||||||||||||||||||| ||||| |||||| | |||||||| ||| |
Sbjct: 312 tctttctctagagttccatattcgtcctctcgggtcttatattcgttctctgggctccta 253

                                                                       
Query: 494 tattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccatatttg 553
           ||||| || |||||||||||||||| |||||||||||||| |||| || ||||||||| |
Sbjct: 252 tattcttcctctgagtctttctctagagtcctatattcgtcctctaggatcccatattcg 193

                                           
Query: 554 ttttctgggctcccatattcgttttctagggt 585
           | |||| || |  |||||||||  ||||||||
Sbjct: 192 tcttctagggtttcatattcgtcctctagggt 161



 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 80/93 (86%), Gaps = 1/93 (1%)
 Strand = Plus / Minus

                                                                       
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
           ||||||| ||||||||||||||||||| ||||||| |||| |||  |||  | |||||||
Sbjct: 192 tcttctagggtttcatattcgtcctctagggtcctatatt-cgttctctgggctctcata 134

                                            
Query: 686 ttcctcttctgagtcttccgctcgagtcctata 718
           ||| || || ||||||||| |||||||||||||
Sbjct: 133 ttcgtcctccgagtcttcctctcgagtcctata 101



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 78/92 (84%)
 Strand = Plus / Minus

                                                                       
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatttgctctctgggttcccatat 496
           |||||||  ||| |||||||||||||| |||||||||||| | |||||||| || |||||
Sbjct: 192 tcttctagggtttcatattcgtcctctagggtcctatattcgttctctgggctctcatat 133

                                           
Query: 497 tcctcttctgagtctttctctaaagtcctata 528
           || || || ||||||| ||||  |||||||||
Sbjct: 132 tcgtcctccgagtcttcctctcgagtcctata 101



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||||| ||||||||||||||||||||
Sbjct: 203 tcccatattcgtcttctagggtttcatattcgt 171



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| ||||||||||| ||||||||
Sbjct: 148 ctctgggctctcatattcgtcctccgagtcttc 116



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 521 gtcctatattcgttctctgggttcccatatt 551
           ||||||||||||||||||||| || ||||||
Sbjct: 162 gtcctatattcgttctctgggctctcatatt 132



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 70/85 (82%), Gaps = 5/85 (5%)
 Strand = Plus / Minus

                                                                       
Query: 639 catattcgtcctctcgggtcctgtattccgtgttctanggtctc--atattcctcttctg 696
           |||||||||||||||||||| | |||||   |||||  || |||  |||||| || ||||
Sbjct: 296 catattcgtcctctcgggtcttatattc---gttctctgggctcctatattcttcctctg 240

                                    
Query: 697 agtcttccgctcgagtcctatattc 721
           |||||| | || |||||||||||||
Sbjct: 239 agtctttctctagagtcctatattc 215
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>gb|U95081.1|MJU95081 Moliniopsis japonica RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 482

 Score =  202 bits (102), Expect = 1e-48
 Identities = 204/238 (85%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           ||||| |||||||||||||||||| | ||||| |||||||||||||| ||||||||||| 
Sbjct: 470 aagatagaatcttcctctgggctcccatattcatcctctgagtcttcctctgagtcttct 411

                                                                       
Query: 374 tctaaagtaccatatttttcctcgccgctttccccggggctgccatattcgtcttctgag 433
           |||||||| |||||||| | |||   ||  ||  | ||||| |||||||| |||||||||
Sbjct: 410 tctaaagtcccatatttgttctctgagccatcttcagggctcccatattcttcttctgag 351

                                                                       
Query: 434 tcttcttctaaagttccatattcgtcctcttgggtcctatatttgctctctgggttccca 493
           ||||| |||| ||||||||||||||||||| ||||| |||||| | |||||||| |||| 
Sbjct: 350 tcttcctctagagttccatattcgtcctctcgggtcttatattcgttctctgggctcccg 291

                                                                     
Query: 494 tattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccatatt 551
           ||||| || |||||||||||||||| ||||||||||||||  ||| || |||||||||
Sbjct: 290 tattcttcctctgagtctttctctagagtcctatattcgtcttctaggatcccatatt 233



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 81/93 (87%), Gaps = 1/93 (1%)
 Strand = Plus / Minus

                                                                       
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
           ||||||| ||||||||||||||||||| | ||||| |||| ||| ||||| ||| |||||
Sbjct: 188 tcttctagggtttcatattcgtcctctagagtcctatatt-cgtcttctagggtttcata 130

                                            
Query: 686 ttcctcttctgagtcttccgctcgagtcctata 718
           ||| |  |||||||||||| |||||||||||||
Sbjct: 129 ttcattctctgagtcttcctctcgagtcctata 97



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 72/85 (84%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| ||||||||||||| ||||| ||| | |||||||| |||| || ||  ||
Sbjct: 370 tcccatattcttcttctgagtcttcctctagagttccatattcgtcctctcgggtcttat 311

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| ||||||||||| |||||
Sbjct: 310 attcgttctctgggctcccgtattc 286



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 79/93 (84%), Gaps = 4/93 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           ||||||||||||||||| |||||||     ||||||| ||||||||||||||||||| | 
Sbjct: 257 tattcgtcttctaggatcccatattcg---tcttctagggtttcatattcgtcctctaga 201

                                            
Query: 656 gtcctgtattccgtgttctanggtctcatattc 688
           ||||| |||| ||| ||||| ||| ||||||||
Sbjct: 200 gtcctatatt-cgtcttctagggtttcatattc 169



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                             
Query: 547 atatttgttttctgggctcccatattcgttttctagggtttcatattcgt 596
           ||||| || |||| || |||||||||||| ||||||||||||||||||||
Sbjct: 258 atattcgtcttctaggatcccatattcgtcttctagggtttcatattcgt 209



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 568 atattcgttttctagggtttcatattcgt 596
           |||||||| ||||||||||||||||||||
Sbjct: 195 atattcgtcttctagggtttcatattcgt 167



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 568 atattcgttttctagggtttcatattc 594
           |||||||| ||||||||||||||||||
Sbjct: 153 atattcgtcttctagggtttcatattc 127



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| ||||||||||||||| || |||| | ||||||
Sbjct: 367 catattcttcttctgagtcttcctctagagttccatattc 328



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 334 catattcgtcctctcgggtc 315



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 230 tcttctagggtttcatattcgtcctctagagtcctatatt 191



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 188 tcttctagggtttcatattcgtcctctagagtcctatatt 149
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>gb|L25381.1|LYURPOC2 Lygeum spartum chloroplast RNA polymerase beta-subunit (rpoC2)
           gene, partial cds
          Length = 486

 Score =  200 bits (101), Expect = 5e-48
 Identities = 196/227 (86%), Gaps = 3/227 (1%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           |||| |||||| |||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 469 aagagggaatcctcctctgggctcccgtattcgtcctctgagtcttcttctgagtcttcc 410

                                                                       
Query: 374 tctaaagtaccatatttttcctcgccgctttccccggggctgccatattcgtcttctgag 433
           |||||||| || ||||  |||||    |  ||||||||| | || |||||||||||||||
Sbjct: 409 tctaaagtcccgtattcgtcctcagaaccctccccggggttcccgtattcgtcttctgag 350

                                                                       
Query: 434 tcttcttctaaagttccatattcgtcctcttgggtcctatatttgctctctgggttccca 493
           ||||| |||| |||||| ||||| | |||| ||||||||||||  |||||||||||||||
Sbjct: 349 tcttcctctagagttccgtattcattctctcgggtcctatattcactctctgggttccca 290

                                                          
Query: 494 ta---ttcctcttctgagtctttctctaaagtcctatattcgttctc 537
           ||   ||| |||||||||| |||||| | ||||||||||||||||||
Sbjct: 289 tattcttcgtcttctgagtttttctcgagagtcctatattcgttctc 243



 Score =  115 bits (58), Expect = 2e-22
 Identities = 146/175 (83%), Gaps = 7/175 (4%)
 Strand = Plus / Minus

                                                                       
Query: 547 atatttgttttctgggctcccatattcgttttctagggtttcatattcgtattcgtcttc 606
           ||||| ||| || ||||| ||||| |||| ||||||||||||||||||||      | ||
Sbjct: 254 atattcgttctccgggctgccatactcgtcttctagggtttcatattcgt------cctc 201

                                                                       
Query: 607 taggattccatatttagattcttctanggtttcatattcgtcctctcgggtcctgtattc 666
            |||||| ||||||||  |||||||| | ||||||||||||||||||||||||| |||| 
Sbjct: 200 caggatttcatatttatcttcttctaggatttcatattcgtcctctcgggtcctatatt- 142

                                                                  
Query: 667 cgtgttctanggtctcatattcctcttctgagtcttccgctcgagtcctatattc 721
           ||| ||||| |||||||||||| |  ||||||||| || |||||||| |||||||
Sbjct: 141 cgtcttctagggtctcatattcattctctgagtctgcctctcgagtcttatattc 87



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 73/89 (82%)
 Strand = Plus / Minus

                                                                       
Query: 485 gggttcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttc 544
           |||||||| ||||| ||||||||||||| ||||| ||| |  ||||| |||||| || ||
Sbjct: 373 gggttcccgtattcgtcttctgagtcttcctctagagttccgtattcattctctcgggtc 314

                                        
Query: 545 ccatatttgttttctgggctcccatattc 573
           | |||||   | |||||| ||||||||||
Sbjct: 313 ctatattcactctctgggttcccatattc 285



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 450 catattcgtcctcttgggtcctatatt 476
           |||||||||||||| ||||||||||||
Sbjct: 168 catattcgtcctctcgggtcctatatt 142
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>ref|XM_475052.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1791

 Score =  198 bits (100), Expect = 2e-47
 Identities = 173/201 (86%), Gaps = 1/201 (0%)
 Strand = Plus / Minus

                                                                        
Query: 186  ctttagggatgaagatctcggcaagatatgaagttcttgaagaatgnnnnnnnnnccgat 245
            |||||||||||| ||||||||||||||||| |||||||| ||||||         |||||
Sbjct: 1656 ctttagggatgaggatctcggcaagatatgcagttcttggagaatgaaaaaaaa-ccgat 1598

                                                                        
Query: 246  ctacttctttttggtattttagactaaattcttttgttcctcgatgctcaatcaaaccct 305
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || 
Sbjct: 1597 ctacttctttttggtattttagactaaattcttttgttcctcgatgctcaatcaaaaccc 1538

                                                                        
Query: 306  cnnnnnnnaagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctg 365
            |       |||| |||||||||||| ||| || | |||||||||||||||||||| ||||
Sbjct: 1537 ccttttttaagacggaatcttcctccgggttcccatattcgtcctctgagtcttcctctg 1478

                                 
Query: 366  agtcttcctctaaagtaccat 386
            |||||||||||||||| ||||
Sbjct: 1477 agtcttcctctaaagtcccat 1457



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 113/136 (83%)
 Strand = Plus / Minus

                                                                        
Query: 416  ccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
            |||| |||||| ||||||||||| |||||||| |||||||  |||||| ||| |||||||
Sbjct: 1460 ccatgttcgtcctctgagtcttcctctaaagtgccatatttatcctctcggggcctatat 1401

                                                                        
Query: 476  ttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttc 535
            ||| |||||||  |||||||||| || || || || | ||||  |||||||||||||| |
Sbjct: 1400 ttgttctctggactcccatattcgtcctcggattcctcctctcgagtcctatattcgtcc 1341

                            
Query: 536  tctgggttcccatatt 551
            ||| || | |||||||
Sbjct: 1340 tctaggattccatatt 1325



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 72/86 (83%)
 Strand = Plus / Minus

                                                                        
Query: 453  attcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctt 512
            |||| |||||| |||||||||||| | | |||||| |||| ||||| |  ||||||||||
Sbjct: 1222 attcttcctctcgggtcctatattcgttttctgggctcccgtattcgttctctgagtctt 1163

                                      
Query: 513  tctctaaagtcctatattcgttctct 538
            |||||   ||||||||||||| ||||
Sbjct: 1162 tctctcgggtcctatattcgtcctct 1137



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 50/57 (87%), Gaps = 3/57 (5%)
 Strand = Plus / Minus

                                                                     
Query: 596  tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctct 652
            |||||||| |||||||||||||||| |   ||||||| |||||||||||||| ||||
Sbjct: 1349 tattcgtcctctaggattccatattca---tcttctagggtttcatattcgttctct 1296



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                               
Query: 362  tctgagtcttcctctaaagtaccatatttttcctc 396
            |||||||||||||||||||| |||||||| |||||
Sbjct: 1448 tctgagtcttcctctaaagtgccatatttatcctc 1414



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 72/87 (82%)
 Strand = Plus / Minus

                                                                        
Query: 489  tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
            |||||| ||| || |||||||||| ||||||||| | |||||  | |||| ||  || ||
Sbjct: 1462 tcccatgttcgtcctctgagtcttcctctaaagtgccatatttatcctctcggggcctat 1403

                                       
Query: 549  atttgttttctgggctcccatattcgt 575
            ||||||| ||||| |||||||||||||
Sbjct: 1402 atttgttctctggactcccatattcgt 1376



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                          
Query: 546  catatttgttttctgggctcccatattcgttttctagggtttcata 591
            |||||| ||| |||||| |||||||||| | |||||||||||||||
Sbjct: 1309 catattcgttctctgggatcccatattcatcttctagggtttcata 1264



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 428  tctgagtcttcttctaaagttccatattcgtcctct 463
            ||||||||||| |||||||| |||| ||||||||||
Sbjct: 1481 tctgagtcttcctctaaagtcccatgttcgtcctct 1446



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 566  ccatattcgttttctagggtttcatattcgt 596
            |||||||| | ||||||||||||||||||||
Sbjct: 1331 ccatattcatcttctagggtttcatattcgt 1301



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 329  tctgggctctcgtattcgtcctctgagtctt 359
            ||||||||| ||||||||| |||||||||||
Sbjct: 1193 tctgggctcccgtattcgttctctgagtctt 1163



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 526  atattcgttctctgggttcccatatt 551
            |||||||||||||||| |||||||||
Sbjct: 1308 atattcgttctctgggatcccatatt 1283



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 626  tcttctanggtttcatattcgtcctctcgggtcctgtattc 666
            ||||||| ||||| | |||| |||||||||||||| |||||
Sbjct: 1238 tcttctagggttttacattcttcctctcgggtcctatattc 1198



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 547  atatttgttttctgggctcccatattcgtt 576
            ||||| ||||||||||||||| ||||||||
Sbjct: 1203 atattcgttttctgggctcccgtattcgtt 1174



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 485  gggttcccatattcctcttctgagtctttctct 517
            |||||||||||||| || |||||||||| ||||
Sbjct: 1511 gggttcccatattcgtcctctgagtcttcctct 1479



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 503  tctgagtctttctctaaagtcctatattcgttctctg 539
            |||||||||| ||||||||||| || ||||| |||||
Sbjct: 1481 tctgagtcttcctctaaagtcccatgttcgtcctctg 1445



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 451  atattcgtcctcttgggtcctatat 475
            ||||||||||||| |||||||||||
Sbjct: 1149 atattcgtcctctagggtcctatat 1125



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 521  gtcctatattcgttctctgggttcccatatttgttttctg 560
            |||||||||||||| |||||| |||| |||| ||| ||||
Sbjct: 1208 gtcctatattcgttttctgggctcccgtattcgttctctg 1169
to top
>gb|L25382.1|NAUCPRPOC2 Nardus stricta chloroplast RNA polymerase beta-subunit (rpoC2)
           gene, partial cds
          Length = 465

 Score =  196 bits (99), Expect = 7e-47
 Identities = 194/225 (86%), Gaps = 3/225 (1%)
 Strand = Plus / Minus

                                                                       
Query: 320 gaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaa 379
           ||||| ||||||| |||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 442 gaatcctcctctgagctcccgtattcgtcctctgagtcttcctctgagtcttcctctaaa 383

                                                                       
Query: 380 gtaccatatttttcctcgccgctttccccggggctgccatattcgtcttctgagtcttct 439
           || ||||| |  |||||    ||| |||| | ||| ||||||||||||||||||||||| 
Sbjct: 382 gtcccatactcgtcctctgaacttccccccgcgctcccatattcgtcttctgagtcttcc 323

                                                                       
Query: 440 tctaaagttccatattcgtcctcttgggtcctatatttgctctctgggttcccata---t 496
           |||| ||||||||||||||| ||| ||||||||||||  ||||| ||| |||||||   |
Sbjct: 322 tctagagttccatattcgtcttctcgggtcctatattcactctcagggctcccatattct 263

                                                        
Query: 497 tcctcttctgagtctttctctaaagtcctatattcgttctctggg 541
           || |||||||||| |||||| | ||||||||||||||||||||||
Sbjct: 262 tcgtcttctgagtttttctcgagagtcctatattcgttctctggg 218



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 99/120 (82%), Gaps = 6/120 (5%)
 Strand = Plus / Minus

                                                                       
Query: 547 atatttgttttctgggctcccatattcgttttctagggtttcatattcgtattcgtcttc 606
           ||||| ||| |||||||| ||||| || | ||||||||||||||||||||      | ||
Sbjct: 233 atattcgttctctgggctgccatactcttcttctagggtttcatattcgt------cctc 180

                                                                       
Query: 607 taggattccatatttagattcttctanggtttcatattcgtcctctcgggtcctgtattc 666
           ||||||||  ||||||  |||||||| ||||||||||||||||||| || ||| ||||||
Sbjct: 179 taggattctgtatttatcttcttctagggtttcatattcgtcctctaggatcccgtattc 120



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| ||||||||||||| ||||| ||| | ||||||||  ||| || ||| ||
Sbjct: 348 tcccatattcgtcttctgagtcttcctctagagttccatattcgtcttctcgggtcctat 289

                                    
Query: 549 atttgttttctgggctcccatattc 573
           |||   | || ||||||||||||||
Sbjct: 288 attcactctcagggctcccatattc 264



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| ||||||||||||||| || |||| | ||||||
Sbjct: 345 catattcgtcttctgagtcttcctctagagttccatattc 306



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 639 catattcgtcctctcgggtcctgtattc 666
           |||||||||| ||||||||||| |||||
Sbjct: 312 catattcgtcttctcgggtcctatattc 285
to top
>gb|L25385.1|PGICPRPOC2 Phragmites australis RNA polymerase beta-subunit (rpoC2), partial
           cds; chloroplast gene for chloroplast product
          Length = 501

 Score =  194 bits (98), Expect = 3e-46
 Identities = 203/238 (85%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           ||||| |||||||||||||||||| | ||||| |||||||||||||| ||||||||||| 
Sbjct: 484 aagatagaatcttcctctgggctcccatattcatcctctgagtcttcctctgagtcttct 425

                                                                       
Query: 374 tctaaagtaccatatttttcctcgccgctttccccggggctgccatattcgtcttctgag 433
           |||||||| |||||||  | |||   ||  ||  | ||||| |||||||| |||||||||
Sbjct: 424 tctaaagtcccatattcgttctctgagccatcttcagggctcccatattcttcttctgag 365

                                                                       
Query: 434 tcttcttctaaagttccatattcgtcctcttgggtcctatatttgctctctgggttccca 493
           ||||| |||| ||||||||||||||||||| ||||| |||||| | |||||||| |||| 
Sbjct: 364 tcttcctctagagttccatattcgtcctctcgggtcttatattcgttctctgggctcccg 305

                                                                     
Query: 494 tattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccatatt 551
           ||||| || |||||||||||||||| ||||||||||||||  ||| || |||||||||
Sbjct: 304 tattcttcctctgagtctttctctagagtcctatattcgtcttctaggatcccatatt 247



 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 80/93 (86%), Gaps = 1/93 (1%)
 Strand = Plus / Minus

                                                                       
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
           ||||||| ||||||||||||||||||| | ||||| |||||| | ||||| ||| | |||
Sbjct: 202 tcttctagggtttcatattcgtcctctagagtcctatattcc-tcttctagggttttata 144

                                            
Query: 686 ttcctcttctgagtcttccgctcgagtcctata 718
           ||| |  |||||||||||| |||||||||||||
Sbjct: 143 ttcgttctctgagtcttcctctcgagtcctata 111



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 72/85 (84%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| ||||||||||||| ||||| ||| | |||||||| |||| || ||  ||
Sbjct: 384 tcccatattcttcttctgagtcttcctctagagttccatattcgtcctctcgggtcttat 325

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| ||||||||||| |||||
Sbjct: 324 attcgttctctgggctcccgtattc 300



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 79/93 (84%), Gaps = 4/93 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           ||||||||||||||||| |||||||     ||||||| ||||||||||||||||||| | 
Sbjct: 271 tattcgtcttctaggatcccatattcg---tcttctagggtttcatattcgtcctctaga 215

                                            
Query: 656 gtcctgtattccgtgttctanggtctcatattc 688
           ||||| |||||| | ||||| ||| ||||||||
Sbjct: 214 gtcctatattcc-tcttctagggtttcatattc 183



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                             
Query: 547 atatttgttttctgggctcccatattcgttttctagggtttcatattcgt 596
           ||||| || |||| || |||||||||||| ||||||||||||||||||||
Sbjct: 272 atattcgtcttctaggatcccatattcgtcttctagggtttcatattcgt 223



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 568 atattcgttttctagggtttcatattcgt 596
           |||||| | ||||||||||||||||||||
Sbjct: 209 atattcctcttctagggtttcatattcgt 181



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| ||||||||||||||| || |||| | ||||||
Sbjct: 381 catattcttcttctgagtcttcctctagagttccatattc 342



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 348 catattcgtcctctcgggtc 329



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 244 tcttctagggtttcatattcgtcctctagagtcctatatt 205



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 202 tcttctagggtttcatattcgtcctctagagtcctatatt 163
to top
>gb|L25379.1|HKLCPRPOC2 Hakonechloa macra chloroplast RNA polymerase beta-subunit (rpoC2)
           gene, partial cds
          Length = 459

 Score =  194 bits (98), Expect = 3e-46
 Identities = 203/238 (85%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           ||||| |||||||||||||||||| | ||||| |||||||||||||| ||||||||||| 
Sbjct: 442 aagatagaatcttcctctgggctcccatattcatcctctgagtcttcctctgagtcttct 383

                                                                       
Query: 374 tctaaagtaccatatttttcctcgccgctttccccggggctgccatattcgtcttctgag 433
           |||||||| |||||||  | |||   ||  ||  | ||||| |||||||| |||||||||
Sbjct: 382 tctaaagtcccatattcgttctctgagccatcttcagggctcccatattcttcttctgag 323

                                                                       
Query: 434 tcttcttctaaagttccatattcgtcctcttgggtcctatatttgctctctgggttccca 493
           ||||| |||| ||||||||||||||||||| ||||| |||||| | |||||||| |||| 
Sbjct: 322 tcttcctctagagttccatattcgtcctctcgggtcttatattcgttctctgggctcccg 263

                                                                     
Query: 494 tattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccatatt 551
           ||||| || |||||||||||||||| ||||||||||||||  ||| || |||||||||
Sbjct: 262 tattcttcctctgagtctttctctagagtcctatattcgtcttctaggatcccatatt 205



 Score = 93.7 bits (47), Expect = 8e-16
 Identities = 105/123 (85%), Gaps = 4/123 (3%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           ||||||||||||||||| |||||||     ||||||| ||||||||||||||||||| | 
Sbjct: 229 tattcgtcttctaggatcccatattcg---tcttctagggtttcatattcgtcctctaga 173

                                                                       
Query: 656 gtcctgtattccgtgttctanggtctcatattcctcttctgagtcttccgctcgagtcct 715
           ||||| |||| ||| ||||| ||| |||||||| |  |||||||||||| ||||||||||
Sbjct: 172 gtcctatatt-cgtcttctagggtttcatattcgttctctgagtcttcctctcgagtcct 114

              
Query: 716 ata 718
           |||
Sbjct: 113 ata 111



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 72/85 (84%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| ||||||||||||| ||||| ||| | |||||||| |||| || ||  ||
Sbjct: 342 tcccatattcttcttctgagtcttcctctagagttccatattcgtcctctcgggtcttat 283

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| ||||||||||| |||||
Sbjct: 282 attcgttctctgggctcccgtattc 258



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                             
Query: 547 atatttgttttctgggctcccatattcgttttctagggtttcatattcgt 596
           ||||| || |||| || |||||||||||| ||||||||||||||||||||
Sbjct: 230 atattcgtcttctaggatcccatattcgtcttctagggtttcatattcgt 181



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 568 atattcgttttctagggtttcatattcgt 596
           |||||||| ||||||||||||||||||||
Sbjct: 167 atattcgtcttctagggtttcatattcgt 139



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| ||||||||||||||| || |||| | ||||||
Sbjct: 339 catattcttcttctgagtcttcctctagagttccatattc 300



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 306 catattcgtcctctcgggtc 287



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 202 tcttctagggtttcatattcgtcctctagagtcctatatt 163
to top
>gb|U95130.1|PAU95130 Phragmites australis RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 501

 Score =  194 bits (98), Expect = 3e-46
 Identities = 203/238 (85%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           ||||| |||||||||||||||||| | ||||| |||||||||||||| ||||||||||| 
Sbjct: 484 aagatagaatcttcctctgggctcccatattcatcctctgagtcttcctctgagtcttct 425

                                                                       
Query: 374 tctaaagtaccatatttttcctcgccgctttccccggggctgccatattcgtcttctgag 433
           |||||||| |||||||  | |||   ||  ||  | ||||| |||||||| |||||||||
Sbjct: 424 tctaaagtcccatattcgttctctgagccatcttcagggctcccatattcttcttctgag 365

                                                                       
Query: 434 tcttcttctaaagttccatattcgtcctcttgggtcctatatttgctctctgggttccca 493
           ||||| |||| ||||||||||||||||||| ||||| |||||| | |||||||| |||| 
Sbjct: 364 tcttcctctagagttccatattcgtcctctcgggtcttatattcgttctctgggctcccg 305

                                                                     
Query: 494 tattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccatatt 551
           ||||| || |||||||||||||||| ||||||||||||||  ||| || |||||||||
Sbjct: 304 tattcttcctctgagtctttctctagagtcctatattcgtcttctaggatcccatatt 247



 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 80/93 (86%), Gaps = 1/93 (1%)
 Strand = Plus / Minus

                                                                       
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
           ||||||| ||||||||||||||||||| | ||||| |||||| | ||||| ||| | |||
Sbjct: 202 tcttctagggtttcatattcgtcctctagagtcctatattcc-tcttctagggttttata 144

                                            
Query: 686 ttcctcttctgagtcttccgctcgagtcctata 718
           ||| |  |||||||||||| |||||||||||||
Sbjct: 143 ttcgttctctgagtcttcctctcgagtcctata 111



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 72/85 (84%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| ||||||||||||| ||||| ||| | |||||||| |||| || ||  ||
Sbjct: 384 tcccatattcttcttctgagtcttcctctagagttccatattcgtcctctcgggtcttat 325

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| ||||||||||| |||||
Sbjct: 324 attcgttctctgggctcccgtattc 300



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 79/93 (84%), Gaps = 4/93 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           ||||||||||||||||| |||||||     ||||||| ||||||||||||||||||| | 
Sbjct: 271 tattcgtcttctaggatcccatattcg---tcttctagggtttcatattcgtcctctaga 215

                                            
Query: 656 gtcctgtattccgtgttctanggtctcatattc 688
           ||||| |||||| | ||||| ||| ||||||||
Sbjct: 214 gtcctatattcc-tcttctagggtttcatattc 183



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                             
Query: 547 atatttgttttctgggctcccatattcgttttctagggtttcatattcgt 596
           ||||| || |||| || |||||||||||| ||||||||||||||||||||
Sbjct: 272 atattcgtcttctaggatcccatattcgtcttctagggtttcatattcgt 223



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 568 atattcgttttctagggtttcatattcgt 596
           |||||| | ||||||||||||||||||||
Sbjct: 209 atattcctcttctagggtttcatattcgt 181



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| ||||||||||||||| || |||| | ||||||
Sbjct: 381 catattcttcttctgagtcttcctctagagttccatattc 342



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 348 catattcgtcctctcgggtc 329



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 244 tcttctagggtttcatattcgtcctctagagtcctatatt 205



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 202 tcttctagggtttcatattcgtcctctagagtcctatatt 163
to top
>gb|U94393.1|HMU94393 Hakonechloa macra RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 459

 Score =  194 bits (98), Expect = 3e-46
 Identities = 203/238 (85%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           ||||| |||||||||||||||||| | ||||| |||||||||||||| ||||||||||| 
Sbjct: 442 aagatagaatcttcctctgggctcccatattcatcctctgagtcttcctctgagtcttct 383

                                                                       
Query: 374 tctaaagtaccatatttttcctcgccgctttccccggggctgccatattcgtcttctgag 433
           |||||||| |||||||  | |||   ||  ||  | ||||| |||||||| |||||||||
Sbjct: 382 tctaaagtcccatattcgttctctgagccatcttcagggctcccatattcttcttctgag 323

                                                                       
Query: 434 tcttcttctaaagttccatattcgtcctcttgggtcctatatttgctctctgggttccca 493
           ||||| |||| ||||||||||||||||||| ||||| |||||| | |||||||| |||| 
Sbjct: 322 tcttcctctagagttccatattcgtcctctcgggtcttatattcgttctctgggctcccg 263

                                                                     
Query: 494 tattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccatatt 551
           ||||| || |||||||||||||||| ||||||||||||||  ||| || |||||||||
Sbjct: 262 tattcttcctctgagtctttctctagagtcctatattcgtcttctaggatcccatatt 205



 Score = 93.7 bits (47), Expect = 8e-16
 Identities = 105/123 (85%), Gaps = 4/123 (3%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           ||||||||||||||||| |||||||     ||||||| ||||||||||||||||||| | 
Sbjct: 229 tattcgtcttctaggatcccatattcg---tcttctagggtttcatattcgtcctctaga 173

                                                                       
Query: 656 gtcctgtattccgtgttctanggtctcatattcctcttctgagtcttccgctcgagtcct 715
           ||||| |||| ||| ||||| ||| |||||||| |  |||||||||||| ||||||||||
Sbjct: 172 gtcctatatt-cgtcttctagggtttcatattcgttctctgagtcttcctctcgagtcct 114

              
Query: 716 ata 718
           |||
Sbjct: 113 ata 111



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 72/85 (84%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| ||||||||||||| ||||| ||| | |||||||| |||| || ||  ||
Sbjct: 342 tcccatattcttcttctgagtcttcctctagagttccatattcgtcctctcgggtcttat 283

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| ||||||||||| |||||
Sbjct: 282 attcgttctctgggctcccgtattc 258



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                             
Query: 547 atatttgttttctgggctcccatattcgttttctagggtttcatattcgt 596
           ||||| || |||| || |||||||||||| ||||||||||||||||||||
Sbjct: 230 atattcgtcttctaggatcccatattcgtcttctagggtttcatattcgt 181



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 568 atattcgttttctagggtttcatattcgt 596
           |||||||| ||||||||||||||||||||
Sbjct: 167 atattcgtcttctagggtttcatattcgt 139



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| ||||||||||||||| || |||| | ||||||
Sbjct: 339 catattcttcttctgagtcttcctctagagttccatattc 300



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 306 catattcgtcctctcgggtc 287



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 202 tcttctagggtttcatattcgtcctctagagtcctatatt 163
to top
>gb|U94392.1|GSU94392 Gynerium sagittatum RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 477

 Score =  194 bits (98), Expect = 3e-46
 Identities = 203/238 (85%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           ||||| ||||||||||| |||||| | |||||||| ||||||||||| ||||||||||| 
Sbjct: 470 aagatagaatcttcctccgggctcccatattcgtcttctgagtcttcctctgagtcttct 411

                                                                       
Query: 374 tctaaagtaccatatttttcctcgccgctttccccggggctgccatattcgtcttctgag 433
           |||||||| |||||||  | |||   ||  ||  | ||||| |||||||| |||||||||
Sbjct: 410 tctaaagtcccatattcgttctctgagccatcttcagggctcccatattcttcttctgag 351

                                                                       
Query: 434 tcttcttctaaagttccatattcgtcctcttgggtcctatatttgctctctgggttccca 493
           ||||| |||| ||||||||||||||||||| ||||| |||||| | |||||||| |||| 
Sbjct: 350 tcttcctctagagttccatattcgtcctctcgggtcttatattcgttctctgggctcccg 291

                                                                     
Query: 494 tattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccatatt 551
           ||||| || |||||||||||||||| |||||||||||||| |||| || |||||||||
Sbjct: 290 tattcttcctctgagtctttctctagagtcctatattcgtcctctaggatcccatatt 233



 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 80/93 (86%), Gaps = 1/93 (1%)
 Strand = Plus / Minus

                                                                       
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
           ||||||| ||||||||||||||||||| | ||||| ||||| ||  |||  | |||||||
Sbjct: 188 tcttctagggtttcatattcgtcctctagagtcctatattc-gttctctgggatctcata 130

                                            
Query: 686 ttcctcttctgagtcttccgctcgagtcctata 718
           ||| || |||||||||||| |||||||||||||
Sbjct: 129 ttcgtcctctgagtcttcctctcgagtcctata 97



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 78/92 (84%)
 Strand = Plus / Minus

                                                                       
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatttgctctctgggttcccatat 496
           |||||||  ||| |||||||||||||| | |||||||||| | |||||||| || |||||
Sbjct: 188 tcttctagggtttcatattcgtcctctagagtcctatattcgttctctgggatctcatat 129

                                           
Query: 497 tcctcttctgagtctttctctaaagtcctata 528
           || || |||||||||| ||||  |||||||||
Sbjct: 128 tcgtcctctgagtcttcctctcgagtcctata 97



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 72/85 (84%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| ||||||||||||| ||||| ||| | |||||||| |||| || ||  ||
Sbjct: 370 tcccatattcttcttctgagtcttcctctagagttccatattcgtcctctcgggtcttat 311

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| ||||||||||| |||||
Sbjct: 310 attcgttctctgggctcccgtattc 286



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 79/93 (84%), Gaps = 4/93 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |   ||||||| ||||||||||||||||||| | 
Sbjct: 257 tattcgtcctctaggatcccatattca---tcttctagggtttcatattcgtcctctaga 201

                                            
Query: 656 gtcctgtattccgtgttctanggtctcatattc 688
           ||||| |||| ||| ||||| ||| ||||||||
Sbjct: 200 gtcctatatt-cgtcttctagggtttcatattc 169



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 514 ctctaaagtcctatattcgttctctgggttcccatatt 551
           ||||| |||||||||||||||||||||| || ||||||
Sbjct: 165 ctctagagtcctatattcgttctctgggatctcatatt 128



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 241 tcccatattcatcttctagggtttcatattcgt 209



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 568 atattcgttttctagggtttcatattcgt 596
           |||||||| ||||||||||||||||||||
Sbjct: 195 atattcgtcttctagggtttcatattcgt 167



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           ||||||| |||| ||||||||||||||||||||
Sbjct: 144 ctctgggatctcatattcgtcctctgagtcttc 112



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| ||||||||||||||| || |||| | ||||||
Sbjct: 367 catattcttcttctgagtcttcctctagagttccatattc 328



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 334 catattcgtcctctcgggtc 315



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 230 tcttctagggtttcatattcgtcctctagagtcctatatt 191



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                       
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||||| ||||||||||| |||  ||| | ||| || |||||| |||||| |||||
Sbjct: 133 catattcgtcctctgagtcttcctctcgagtcctatactcttcctctcgggtccgatatt 74
to top
>gb|U96309.1|SSU96309 Spartochloa scirpoidea RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 478

 Score =  186 bits (94), Expect = 7e-44
 Identities = 202/238 (84%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           ||||| |||||||||||||||||| | |||||||||||||||||||| ||||||||||| 
Sbjct: 472 aagatagaatcttcctctgggctcccatattcgtcctctgagtcttcctctgagtcttct 413

                                                                       
Query: 374 tctaaagtaccatatttttcctcgccgctttccccggggctgccatattcgtcttctgag 433
           |||||||| |||||||  | |||   ||  ||  | ||||| | |||||| |||||||||
Sbjct: 412 tctaaagtcccatattcgttctctgagccatcttcagggctcctatattcttcttctgag 353

                                                                       
Query: 434 tcttcttctaaagttccatattcgtcctcttgggtcctatatttgctctctgggttccca 493
           ||||| |||| |||||| |||||||||||| ||||| |||||| | |||||||| |||| 
Sbjct: 352 tcttcctctagagttccgtattcgtcctctcgggtcttatattcgttctctgggctcccg 293

                                                                     
Query: 494 tattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccatatt 551
           ||||| || || ||||||||||||| |||||||||||||| |||| || |||||||||
Sbjct: 292 tattcttcctccgagtctttctctagagtcctatattcgtcctctaggatcccatatt 235



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 82/95 (86%), Gaps = 5/95 (5%)
 Strand = Plus / Minus

                                                                       
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctangg--tctca 683
           ||||||| ||||||||||||| ||||||||||||| ||||   ||||||  ||  |||||
Sbjct: 190 tcttctagggtttcatattcgccctctcgggtcctatatt---tgttctctgggctctca 134

                                              
Query: 684 tattcctcttctgagtcttccgctcgagtcctata 718
           ||||| || |||||||||||| |||||||||||||
Sbjct: 133 tattcgtcctctgagtcttcctctcgagtcctata 99



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 79/92 (85%)
 Strand = Plus / Minus

                                                                       
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatttgctctctgggttcccatat 496
           |||||||  ||| |||||||| ||||| |||||||||||||| |||||||| || |||||
Sbjct: 190 tcttctagggtttcatattcgccctctcgggtcctatatttgttctctgggctctcatat 131

                                           
Query: 497 tcctcttctgagtctttctctaaagtcctata 528
           || || |||||||||| ||||  |||||||||
Sbjct: 130 tcgtcctctgagtcttcctctcgagtcctata 99



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 79/93 (84%), Gaps = 4/93 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |   ||||||| ||||||||||||||||||| | 
Sbjct: 259 tattcgtcctctaggatcccatattca---tcttctagggtttcatattcgtcctctaga 203

                                            
Query: 656 gtcctgtattccgtgttctanggtctcatattc 688
           ||||| |||| ||| ||||| ||| ||||||||
Sbjct: 202 gtcctatatt-cgtcttctagggtttcatattc 171



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| ||||||||||||||||||||
Sbjct: 146 ctctgggctctcatattcgtcctctgagtcttc 114



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 67/81 (82%)
 Strand = Plus / Minus

                                                                       
Query: 493 atattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccatattt 552
           |||||| ||||||||||||| ||||| ||| |  ||||||| |||| || ||  ||||| 
Sbjct: 368 atattcttcttctgagtcttcctctagagttccgtattcgtcctctcgggtcttatattc 309

                                
Query: 553 gttttctgggctcccatattc 573
           ||| ||||||||||| |||||
Sbjct: 308 gttctctgggctcccgtattc 288



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 243 tcccatattcatcttctagggtttcatattcgt 211



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 568 atattcgttttctagggtttcatattcg 595
           |||||||| |||||||||||||||||||
Sbjct: 197 atattcgtcttctagggtttcatattcg 170



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 232 tcttctagggtttcatattcgtcctctagagtcctatatt 193



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                       
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||||| ||||||||||| |||  ||| | ||| || |||||| |||||| |||||
Sbjct: 135 catattcgtcctctgagtcttcctctcgagtcctatactcttcctctcgggtccgatatt 76
to top
>gb|U94824.1|KPU94824 Karroochloa purpurea RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 504

 Score =  186 bits (94), Expect = 7e-44
 Identities = 256/309 (82%), Gaps = 10/309 (3%)
 Strand = Plus / Minus

                                                                       
Query: 410 gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtc 469
           ||||| |||||||| |||||| ||||||| || | | |||||||||||||||||||||||
Sbjct: 388 gggctcccatattcttcttctaagtcttcctcgagaattccatattcgtcctcttgggtc 329

                                                                       
Query: 470 ctatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatat 529
            |||||| | |||| ||| |||||||||| || || ||||||||||||| ||||||||||
Sbjct: 328 ttatattggttctccgggctcccatattcttcctccgagtctttctctagagtcctatat 269

                                                                       
Query: 530 tcgttctctgggttcccatatttgttttctgggctcccatattcgttttctagggtttca 589
           |||| |||| || |||| |||| || |||| || |  ||||||||| |||||| ||||||
Sbjct: 268 tcgtcctctaggatcccgtattcgtcttctaggatttcatattcgtcttctagagtttca 209

                                                                       
Query: 590 tattcgtattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcc 649
                 ||||| || |||||||| ||||||| |   ||||||  ||||||||||||||| 
Sbjct: 208 ------tattcatcctctaggatcccatattca---tcttctcgggtttcatattcgtct 158

                                                                       
Query: 650 tctcgggtcctgtattccgtgttctanggtctcatattcctcttctgagtcttccgctcg 709
           ||||||||| | |||| | | ||||| | |||||||||| ||||||||||||||| ||||
Sbjct: 157 tctcgggtcttatatt-cattttctaggctctcatattcttcttctgagtcttcctctcg 99

                    
Query: 710 agtcctata 718
           |||||||||
Sbjct: 98  agtcctata 90



 Score = 93.7 bits (47), Expect = 8e-16
 Identities = 59/63 (93%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           |||| ||||||||||||||||||| | |||||||||||||||||||| ||||||||||||
Sbjct: 496 aagagggaatcttcctctgggctcccatattcgtcctctgagtcttcctctgagtcttcc 437

              
Query: 374 tct 376
           |||
Sbjct: 436 tct 434



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                      
Query: 347 tcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           |||||||||||||| ||||||||||| |||||||  |||||||
Sbjct: 451 tcctctgagtcttcctctgagtcttcttctaaagccccatatt 409



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 428 tctgagtcttcttctaaagttccatattcgtcctct 463
           |||||||||||||||||||  |||||||||| ||||
Sbjct: 436 tctgagtcttcttctaaagccccatattcgttctct 401



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                      
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           ||||||| |||||||||||||| |||  ||| | ||| || |||||| |||||||||||
Sbjct: 126 catattcttcttctgagtcttcctctcgagtcctatactcttcctctagggtcctatat 68



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| ||||||||||| |||||||||||
Sbjct: 478 gggctcccatattcgtcctctgagtcttc 450



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 503 tctgagtctttctctaaagtcctatattcgttctctg 539
           ||||||||||  ||||||| || ||||||||||||||
Sbjct: 436 tctgagtcttcttctaaagccccatattcgttctctg 400



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 356 tcttcttctgagtcttcctct 376
           |||||||||||||||||||||
Sbjct: 121 tcttcttctgagtcttcctct 101
to top
>gb|AF372185.1| Panicum repens DNA-directed RNA polymerase beta' subunit 2 (rpoC2)
           gene, partial cds; chloroplast gene for chloroplast
           product
          Length = 621

 Score =  184 bits (93), Expect = 3e-43
 Identities = 131/146 (89%)
 Strand = Plus / Minus

                                                                       
Query: 244 atctacttctttttggtattttagactaaattcttttgttcctcgatgctcaatcaaacc 303
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 621 atctacttctttttggtattttagactaaattcttttgttcctcgatgctcaataaaacc 562

                                                                       
Query: 304 ctcnnnnnnnaagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttc 363
           |||       ||||||||||||||||| |||||| | |||||||| ||||||||||| ||
Sbjct: 561 ctctttttttaagatggaatcttcctccgggctcccatattcgtcttctgagtcttcctc 502

                                     
Query: 364 tgagtcttcctctaaagtaccatatt 389
           ||||||||| |||||||| |||||||
Sbjct: 501 tgagtcttcttctaaagtcccatatt 476



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 80/93 (86%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| ||||| |||||| | |||||||| | |||||||| || ||||||||||||||||
Sbjct: 379 cctctcgggtcttatattcgttctctgggctaccatattcttcctctgagtctttctcta 320

                                            
Query: 519 aagtcctatattcgttctctgggttcccatatt 551
            |||||||||||||| ||||  | |||||||||
Sbjct: 319 gagtcctatattcgtcctctaagatcccatatt 287



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           |||||||||| || |||||||||||| |||||||||||||
Sbjct: 184 tctcatattcttcctctgagtcttcctctcgagtcctata 145



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||||||| ||||||||||||| ||||| || ||||||||
Sbjct: 451 tcccatattcttcttctgagtcttcctctagagccctatatt 410



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| |||||||||||||||||||||||
Sbjct: 533 gggctcccatattcgtcttctgagtcttc 505



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 503 tctgagtcttcttctaaagtcccatattc 475



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 295 tcccatattcatcttctagggtttcatattcgt 263



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 626 tcttctanggtttcatattcgtcctct 652
           ||||||| |||||||||||||||||||
Sbjct: 284 tcttctagggtttcatattcgtcctct 258



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 682 catattcctcttctgagtcttccgctcgagtcctatatt 720
           ||||||| ||||||||||||||| || ||| ||||||||
Sbjct: 448 catattcttcttctgagtcttcctctagagccctatatt 410



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 356 tcttcttctgagtcttcctcta 377
           ||||||||||||||||||||||
Sbjct: 443 tcttcttctgagtcttcctcta 422



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                 
Query: 410 gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctct 463
           ||||| |||||||| || ||||||||||  |||| ||| | |||||||||||||
Sbjct: 353 gggctaccatattcttcctctgagtctttctctagagtcctatattcgtcctct 300



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 596 tattcgtcttctaggattccatattt 621
           |||||||||||||||||| |||||||
Sbjct: 248 tattcgtcttctaggatttcatattt 223



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 489 tcccatattcctcttctgagtctttctct 517
           |||||||||| ||||||||||||| ||||
Sbjct: 529 tcccatattcgtcttctgagtcttcctct 501



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           ||||| |||||| ||||| ||||||||||||||
Sbjct: 192 ctctgtgctctcatattcttcctctgagtcttc 160



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 416 ccatattcgtcttctgagtcttcttcta 443
           |||||||| |||||||||||||| ||||
Sbjct: 449 ccatattcttcttctgagtcttcctcta 422



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| || |||||||||| | || |||||||||||||
Sbjct: 346 catattcttcctctgagtctttctctagagtcctatattc 307
to top
>gb|AY174499.1| Streptostachys asperifolia DNA-directed RNA polymerase beta'
           subunit 2 (rpoC2) gene, partial cds; chloroplast gene
           for chloroplast product
          Length = 630

 Score =  182 bits (92), Expect = 1e-42
 Identities = 133/149 (89%)
 Strand = Plus / Minus

                                                                       
Query: 241 ccgatctacttctttttggtattttagactaaattcttttgttcctcgatgctcaatcaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 600 ccgatctacttctttttggtattttagactaaattcttttgttcctcgatgctcaataaa 541

                                                                       
Query: 301 accctcnnnnnnnaagatggaatcttcctctgggctctcgtattcgtcctctgagtcttc 360
           ||||||       ||||| ||||||||||| |||||| | |||||||| |||||||||||
Sbjct: 540 accctctttttttaagatagaatcttcctccgggctcccatattcgtcttctgagtcttc 481

                                        
Query: 361 ttctgagtcttcctctaaagtaccatatt 389
            ||||||||||| |||||||| |||||||
Sbjct: 480 ctctgagtcttcttctaaagtcccatatt 452



 Score =  145 bits (73), Expect = 2e-31
 Identities = 120/136 (88%)
 Strand = Plus / Minus

                                                                       
Query: 416 ccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           |||||||| |||||||||||||| |||| ||||||||||||||||||| ||||| |||||
Sbjct: 425 ccatattcttcttctgagtcttcctctanagttccatattcgtcctctcgggtcttatat 366

                                                                       
Query: 476 ttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttc 535
           | | |||||||| |||| ||||| || |||||||||||||||| |||||||||||||| |
Sbjct: 365 tcgttctctgggctcccgtattcttcctctgagtctttctctagagtcctatattcgtcc 306

                           
Query: 536 tctgggttcccatatt 551
           ||  || |||||||||
Sbjct: 305 tccaggatcccatatt 290



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 72/85 (84%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| ||||||||||||| ||||| ||| | |||||||| |||| || ||  ||
Sbjct: 427 tcccatattcttcttctgagtcttcctctanagttccatattcgtcctctcgggtcttat 368

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| ||||||||||| |||||
Sbjct: 367 attcgttctctgggctcccgtattc 343



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           |||||||||||||||||| |  || |||| || ||||||| || |||||||||| |||| 
Sbjct: 217 cctcttgggtcctatattcgtactmtgggctctcatattcatcctctgagtcttcctctc 158

                     
Query: 519 aagtcctata 528
            |||||||||
Sbjct: 157 gagtcctata 148



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           |||||||||| || |||||||||||| |||||||||||||
Sbjct: 187 tctcatattcatcctctgagtcttcctctcgagtcctata 148



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 356 tcttcttctgagtcttcctctaaagtaccatatt 389
           |||||||||||||||||||||| ||| |||||||
Sbjct: 419 tcttcttctgagtcttcctctanagttccatatt 386



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattc 666
           ||||||| ||||||||||||||||||| | ||||| |||||
Sbjct: 287 tcttctagggtttcatattcgtcctctagagtcctatattc 247



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| |||||||||||||||||||||||
Sbjct: 509 gggctcccatattcgtcttctgagtcttc 481



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 479 tctgagtcttcttctaaagtcccatattc 451



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 298 tcccatattcatcttctagggtttcatattcgt 266



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| ||||||| |||||||||||||
Sbjct: 360 ctctgggctcccgtattcttcctctgagtctt 329



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           || ||||||||| ||||| ||||||||||||||
Sbjct: 195 ctmtgggctctcatattcatcctctgagtcttc 163



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 489 tcccatattcctcttctgagtctttctct 517
           |||||||||| ||||||||||||| ||||
Sbjct: 505 tcccatattcgtcttctgagtcttcctct 477



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 391 catattcgtcctctcgggtc 372



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 287 tcttctagggtttcatattcgtcctctagagtcctatatt 248



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                       
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatt 476
           ||||||| || ||||||||||| |||  ||| | ||| || |||||| ||||||||||||
Sbjct: 184 catattcatcctctgagtcttcctctcgagtcctatactcttcctctcgggtcctatatt 125
to top
>gb|AY174487.1| Panicum euprepes DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 621

 Score =  182 bits (92), Expect = 1e-42
 Identities = 133/149 (89%)
 Strand = Plus / Minus

                                                                       
Query: 241 ccgatctacttctttttggtattttagactaaattcttttgttcctcgatgctcaatcaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 621 ccgatctacttctttttggtattttagactaaattcttttgttcctcgatgctcaataaa 562

                                                                       
Query: 301 accctcnnnnnnnaagatggaatcttcctctgggctctcgtattcgtcctctgagtcttc 360
           ||||||       ||||| ||||||||||| |||||| | |||||||| |||||||||||
Sbjct: 561 accctctttttttaagatagaatcttcctccgggctcccatattcgtcttctgagtcttc 502

                                        
Query: 361 ttctgagtcttcctctaaagtaccatatt 389
            ||||||||||| |||||||| |||||||
Sbjct: 501 ctctgagtcttcttctaaagtgccatatt 473



 Score =  143 bits (72), Expect = 9e-31
 Identities = 120/136 (88%)
 Strand = Plus / Minus

                                                                       
Query: 416 ccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           |||||||| |||||||||||||| |||| ||||||||||||||||||| ||||| |||||
Sbjct: 446 ccatattcttcttctgagtcttcctctagagttccatattcgtcctctcgggtcttatat 387

                                                                       
Query: 476 ttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttc 535
           | | |||||||| |||| ||||| || |||||||||||||||| |||||||||||| | |
Sbjct: 386 tcgttctctgggctcccgtattcttcctctgagtctttctctagagtcctatattcatcc 327

                           
Query: 536 tctgggttcccatatt 551
           ||| || |||||||||
Sbjct: 326 tctaggatcccatatt 311



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 72/85 (84%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| ||||||||||||| ||||| ||| | |||||||| |||| || ||  ||
Sbjct: 448 tcccatattcttcttctgagtcttcctctagagttccatattcgtcctctcgggtcttat 389

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| ||||||||||| |||||
Sbjct: 388 attcgttctctgggctcccgtattc 364



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           |||||||||| || |||||||||||| |||||||||||||
Sbjct: 208 tctcatattcgtcctctgagtcttcctctcgagtcctata 169



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 356 tcttcttctgagtcttcctctaaagtaccatatt 389
           |||||||||||||||||||||| ||| |||||||
Sbjct: 440 tcttcttctgagtcttcctctagagttccatatt 407



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattc 666
           ||||||| ||||||||||||||||||| | ||||| |||||
Sbjct: 308 tcttctagggtttcatattcgtcctctagagtcctatattc 268



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||| | |||| ||| || ||||||| || |||||||||| |||| 
Sbjct: 238 cctctcgggtcctatattcgttctcggggctctcatattcgtcctctgagtcttcctctc 179

                     
Query: 519 aagtcctata 528
            |||||||||
Sbjct: 178 gagtcctata 169



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| |||||||||||||||||||||||
Sbjct: 530 gggctcccatattcgtcttctgagtcttc 502



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 500 tctgagtcttcttctaaagtgccatattc 472



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 319 tcccatattcatcttctagggtttcatattcgt 287



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 332 gggctctcgtattcgtcctctgagtcttc 360
           |||||||| ||||||||||||||||||||
Sbjct: 212 gggctctcatattcgtcctctgagtcttc 184



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| ||||||| |||||||||||||
Sbjct: 381 ctctgggctcccgtattcttcctctgagtctt 350



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 489 tcccatattcctcttctgagtctttctct 517
           |||||||||| ||||||||||||| ||||
Sbjct: 526 tcccatattcgtcttctgagtcttcctct 498



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 57/69 (82%)
 Strand = Plus / Minus

                                                                       
Query: 408 cggggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttggg 467
           |||||||  |||||||||| ||||||||||| |||  ||| | ||| || |||||| |||
Sbjct: 214 cggggctctcatattcgtcctctgagtcttcctctcgagtcctatactcttcctctcggg 155

                    
Query: 468 tcctatatt 476
           ||| |||||
Sbjct: 154 tccgatatt 146



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| ||||||||||||||| || |||| | ||||||
Sbjct: 445 catattcttcttctgagtcttcctctagagttccatattc 406



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 412 catattcgtcctctcgggtc 393



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 308 tcttctagggtttcatattcgtcctctagagtcctatatt 269
to top
>gb|U92265.1|CGU92265 Centropodia glauca RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 480

 Score =  182 bits (92), Expect = 1e-42
 Identities = 197/232 (84%)
 Strand = Plus / Minus

                                                                       
Query: 320 gaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaa 379
           |||||||||||||| ||| | |||||||||||||||||||||||||||||||| ||||||
Sbjct: 467 gaatcttcctctggactcccatattcgtcctctgagtcttcttctgagtcttcttctaaa 408

                                                                       
Query: 380 gtaccatatttttcctcgccgctttccccggggctgccatattcgtcttctgagtcttct 439
           |  |||||||  | |||   ||  ||| |  |||| |||||| | | |||||||||||| 
Sbjct: 407 gctccatattcgttctctgagccatcctcacggctcccatatcctttttctgagtcttcc 348

                                                                       
Query: 440 tctaaagttccatattcgtcctcttgggtcctatatttgctctctgggttcccatattcc 499
           |||| |||| |||||||||||||| ||||| |||||| | |||||||| |||||||||| 
Sbjct: 347 tctagagtttcatattcgtcctctcgggtcttatattcgttctctgggctcccatattct 288

                                                               
Query: 500 tcttctgagtctttctctaaagtcctatattcgttctctgggttcccatatt 551
           |||||||||||||| |||| |||||||||||||| |||| || |||||||||
Sbjct: 287 tcttctgagtctttttctagagtcctatattcgtcctctaggatcccatatt 236



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 80/92 (86%)
 Strand = Plus / Minus

                                                                       
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatttgctctctgggttcccatat 496
           |||||||  ||| |||||||||||||| |||||||||||| | |||||||  || |||||
Sbjct: 191 tcttctagggtttcatattcgtcctctcgggtcctatattcgttctctggactctcatat 132

                                           
Query: 497 tcctcttctgagtctttctctaaagtcctata 528
           || ||||||||||||| ||||| |||||||||
Sbjct: 131 tcgtcttctgagtcttcctctagagtcctata 100



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 83/95 (87%), Gaps = 5/95 (5%)
 Strand = Plus / Minus

                                                                       
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctangg--tctca 683
           ||||||| ||||||||||||||||||||||||||| |||||   |||||  ||  |||||
Sbjct: 191 tcttctagggtttcatattcgtcctctcgggtcctatattc---gttctctggactctca 135

                                              
Query: 684 tattcctcttctgagtcttccgctcgagtcctata 718
           ||||| ||||||||||||||| || ||||||||||
Sbjct: 134 tattcgtcttctgagtcttcctctagagtcctata 100



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 79/93 (84%), Gaps = 4/93 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |   ||||||| ||||||||||||||||||| | 
Sbjct: 260 tattcgtcctctaggatcccatattca---tcttctagggtttcatattcgtcctctaga 204

                                            
Query: 656 gtcctgtattccgtgttctanggtctcatattc 688
           ||||| |||| ||| ||||| ||| ||||||||
Sbjct: 203 gtcctatatt-cgtcttctagggtttcatattc 172



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 73/87 (83%), Gaps = 1/87 (1%)
 Strand = Plus / Minus

                                                                       
Query: 635 gtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcatattcctcttc 694
           |||||||||||||||||||||||| | |||| |||  |||  | || ||||||| |||||
Sbjct: 341 gtttcatattcgtcctctcgggtcttatatt-cgttctctgggctcccatattcttcttc 283

                                      
Query: 695 tgagtcttccgctcgagtcctatattc 721
           ||||||||   || |||||||||||||
Sbjct: 282 tgagtctttttctagagtcctatattc 256



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                       
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||||||||||||||||| |||| ||| | ||| || |||||| |||||| |||||
Sbjct: 136 catattcgtcttctgagtcttcctctagagtcctatactcttcctctcgggtccgatatt 77



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||| | | ||||||||||| ||||| |||   |||||||| |||| || ||  ||
Sbjct: 373 tcccatatcctttttctgagtcttcctctagagtttcatattcgtcctctcgggtcttat 314

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| |||||||||||||||||
Sbjct: 313 attcgttctctgggctcccatattc 289



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 244 tcccatattcatcttctagggtttcatattcgt 212



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 568 atattcgttttctagggtttcatattcgt 596
           |||||||| ||||||||||||||||||||
Sbjct: 198 atattcgtcttctagggtttcatattcgt 170



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||| ||||| |||||||| |||||||||||
Sbjct: 147 ctctggactctcatattcgtcttctgagtcttc 115



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 233 tcttctagggtttcatattcgtcctctagagtcctatatt 194



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 521 gtcctatattcgttctctgg 540
           ||||||||||||||||||||
Sbjct: 161 gtcctatattcgttctctgg 142
to top
>gb|AY174495.1| Setaria macrostachya DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 625

 Score =  178 bits (90), Expect = 2e-41
 Identities = 131/147 (89%)
 Strand = Plus / Minus

                                                                       
Query: 243 gatctacttctttttggtattttagactaaattcttttgttcctcgatgctcaatcaaac 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 625 gatctacttctttttggtattttagactaaattcttttgttcctcgatgctcaataaaac 566

                                                                       
Query: 303 cctcnnnnnnnaagatggaatcttcctctgggctctcgtattcgtcctctgagtcttctt 362
            |||       ||||||||||||||||| |||||| | |||||||| ||||||||||| |
Sbjct: 565 tctctttttttaagatggaatcttcctccgggctcccatattcgtcttctgagtcttcct 506

                                      
Query: 363 ctgagtcttcctctaaagtaccatatt 389
           |||||||||| |||||||| |||||||
Sbjct: 505 ctgagtcttcttctaaagtcccatatt 479



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 79/93 (84%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| ||||| |||||| | |||||||| |||| ||||| || ||||||||||||||||
Sbjct: 382 cctctcgggtcttatattcgttctctgggctcccgtattcttcctctgagtctttctcta 323

                                            
Query: 519 aagtcctatattcgttctctgggttcccatatt 551
            || || |||||||| |||| || |||||||||
Sbjct: 322 gaggcccatattcgtcctctaggatcccatatt 290



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||||| |||||||| || ||||||| || |||||||||| |||| 
Sbjct: 217 cctctcgggtcctatatttgttctctgggctctcatattcgtcctctgagtcttcctctc 158

                     
Query: 519 aagtcctata 528
            |||||||||
Sbjct: 157 gagtcctata 148



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                     
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||||||| ||||||||||||| ||||| |||||||||||
Sbjct: 454 tcccatattcttcttctgagtcttcctctagagtcctatatt 413



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 60/70 (85%), Gaps = 3/70 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |   ||||||| ||||||||||||||||||| | 
Sbjct: 314 tattcgtcctctaggatcccatattca---tcttctagggtttcatattcgtcctctaga 258

                     
Query: 656 gtcctgtatt 665
           ||||| ||||
Sbjct: 257 gtcctatatt 248



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| ||||||||||||||||||||
Sbjct: 195 ctctgggctctcatattcgtcctctgagtcttc 163



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           |||||||||| || |||||||||||| |||||||||||||
Sbjct: 187 tctcatattcgtcctctgagtcttcctctcgagtcctata 148



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 682 catattcctcttctgagtcttccgctcgagtcctatatt 720
           ||||||| ||||||||||||||| || ||||||||||||
Sbjct: 451 catattcttcttctgagtcttcctctagagtcctatatt 413



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| |||||||||||||||||||||||
Sbjct: 536 gggctcccatattcgtcttctgagtcttc 508



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 506 tctgagtcttcttctaaagtcccatattc 478



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 298 tcccatattcatcttctagggtttcatattcgt 266



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| ||||||| |||||||||||||
Sbjct: 360 ctctgggctcccgtattcttcctctgagtctt 329



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 356 tcttcttctgagtcttcctctaaagtaccatattt 390
           |||||||||||||||||||||| ||| | ||||||
Sbjct: 446 tcttcttctgagtcttcctctagagtcctatattt 412



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatttg 478
           |||||||  ||| |||||||||||||| | ||||||||||||
Sbjct: 287 tcttctagggtttcatattcgtcctctagagtcctatatttg 246



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 489 tcccatattcctcttctgagtctttctct 517
           |||||||||| ||||||||||||| ||||
Sbjct: 532 tcccatattcgtcttctgagtcttcctct 504



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 416 ccatattcgtcttctgagtcttcttcta 443
           |||||||| |||||||||||||| ||||
Sbjct: 452 ccatattcttcttctgagtcttcctcta 425
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>gb|U94334.1|CLU94334 Chasmanthium latifolium RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 458

 Score =  178 bits (90), Expect = 2e-41
 Identities = 192/226 (84%)
 Strand = Plus / Minus

                                                                       
Query: 326 tcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtacca 385
           |||||||||||| | |||||||| ||||||||||| ||||||||||| |||||||| |||
Sbjct: 439 tcctctgggctcccatattcgtcttctgagtcttcctctgagtcttcttctaaagtccca 380

                                                                       
Query: 386 tatttttcctcgccgctttccccggggctgccatattcgtcttctgagtcttcttctaaa 445
           ||||  | |||   ||  ||  | ||||| |||||||| |||||||||||||| |||| |
Sbjct: 379 tattcgttctctgagccatcttcagggctcccatattcttcttctgagtcttcctctaga 320

                                                                       
Query: 446 gttccatattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttct 505
           |||||||||||||||||| ||||| |||||| | |||||||| | || ||||| || |||
Sbjct: 319 gttccatattcgtcctctcgggtcttatattcgttctctgggctaccgtattcttcctct 260

                                                         
Query: 506 gagtctttctctaaagtcctatattcgttctctgggttcccatatt 551
           ||||||||||||| |||||||||||||| |||| || |||||||||
Sbjct: 259 gagtctttctctagagtcctatattcgtcctctaggatcccatatt 214



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 79/93 (84%), Gaps = 1/93 (1%)
 Strand = Plus / Minus

                                                                       
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
           ||||||| ||||||||||||| ||||||||||||| |||| |||  |||  | |||||||
Sbjct: 169 tcttctagggtttcatattcgccctctcgggtcctatatt-cgttctctgggctctcata 111

                                            
Query: 686 ttcctcttctgagtcttccgctcgagtcctata 718
           ||| || |||||||||||  |||| ||||||||
Sbjct: 110 ttcgtcctctgagtcttcttctcgggtcctata 78



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 36/37 (97%)
 Strand = Plus / Minus

                                                
Query: 328 ctctgggctctcgtattcgtcctctgagtcttcttct 364
           |||||||||||| ||||||||||||||||||||||||
Sbjct: 125 ctctgggctctcatattcgtcctctgagtcttcttct 89



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 65/76 (85%)
 Strand = Plus / Minus

                                                                       
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatttgctctctgggttcccatat 496
           |||||||  ||| |||||||| ||||| |||||||||||| | |||||||| || |||||
Sbjct: 169 tcttctagggtttcatattcgccctctcgggtcctatattcgttctctgggctctcatat 110

                           
Query: 497 tcctcttctgagtctt 512
           || || ||||||||||
Sbjct: 109 tcgtcctctgagtctt 94



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 71/85 (83%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| ||||||||||||| ||||| ||| | |||||||| |||| || ||  ||
Sbjct: 351 tcccatattcttcttctgagtcttcctctagagttccatattcgtcctctcgggtcttat 292

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| |||||||| || |||||
Sbjct: 291 attcgttctctgggctaccgtattc 267



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 77/93 (82%), Gaps = 4/93 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |   ||||||| |||||| |||||||||||| | 
Sbjct: 238 tattcgtcctctaggatcccatattca---tcttctagggtttcgtattcgtcctctaga 182

                                            
Query: 656 gtcctgtattccgtgttctanggtctcatattc 688
           || || |||| ||| ||||| ||| ||||||||
Sbjct: 181 gttctatatt-cgtcttctagggtttcatattc 150



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 568 atattcgttttctagggtttcatattcg 595
           |||||||| |||||||||||||||||||
Sbjct: 176 atattcgtcttctagggtttcatattcg 149



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 521 gtcctatattcgttctctgggttcccatatt 551
           ||||||||||||||||||||| || ||||||
Sbjct: 139 gtcctatattcgttctctgggctctcatatt 109



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 417 catattcgtcttctgagtcttcttct 442
           |||||||||| |||||||||||||||
Sbjct: 114 catattcgtcctctgagtcttcttct 89



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | |||||||||||| |||||||
Sbjct: 222 tcccatattcatcttctagggtttcgtattcgt 190



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 557 tctgggctcccatattcgttttct 580
           ||||||||||||||||||| ||||
Sbjct: 436 tctgggctcccatattcgtcttct 413



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| ||||||||||||||| || |||| | ||||||
Sbjct: 348 catattcttcttctgagtcttcctctagagttccatattc 309



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 315 catattcgtcctctcgggtc 296
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>gb|AY254806.1| Axonopus fissifolius DNA-directed RNA polymerase beta' subunit 2
           gene, partial cds; chloroplast gene for chloroplast
           product
          Length = 567

 Score =  174 bits (88), Expect = 3e-40
 Identities = 132/149 (88%)
 Strand = Plus / Minus

                                                                       
Query: 241 ccgatctacttctttttggtattttagactaaattcttttgttcctcgatgctcaatcaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 537 ccgatctacttctttttggtattttagactaaattcttttgttcctcgatgctcaataaa 478

                                                                       
Query: 301 accctcnnnnnnnaagatggaatcttcctctgggctctcgtattcgtcctctgagtcttc 360
           ||||||       ||||| ||||||||||| |||||  | |||||||| |||||||||||
Sbjct: 477 accctcttttttgaagatagaatcttcctccgggcttccatattcgtcttctgagtcttc 418

                                        
Query: 361 ttctgagtcttcctctaaagtaccatatt 389
            ||||||||||| |||||||| |||||||
Sbjct: 417 ctctgagtcttcttctaaagtcccatatt 389



 Score =  139 bits (70), Expect = 1e-29
 Identities = 106/118 (89%)
 Strand = Plus / Minus

                                                                       
Query: 416 ccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           |||||||| |||||||||||||| |||| ||||||||||||||||||| ||||| |||||
Sbjct: 362 ccatattcttcttctgagtcttcctctagagttccatattcgtcctctcgggtcttatat 303

                                                                     
Query: 476 ttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgt 533
           | | |||||||| |||| ||||| || |||||||||||||||| ||||||||||||||
Sbjct: 302 tcgttctctgggctcccgtattcttcctctgagtctttctctagagtcctatattcgt 245



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                       
Query: 491 ccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccatat 550
           |||||||| ||||||||||||| ||||| ||| | |||||||| |||| || ||  ||||
Sbjct: 362 ccatattcttcttctgagtcttcctctagagttccatattcgtcctctcgggtcttatat 303

                                  
Query: 551 ttgttttctgggctcccatattc 573
           | ||| ||||||||||| |||||
Sbjct: 302 tcgttctctgggctcccgtattc 280



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           |||||||||||||||||| | |||||||  || ||||||| || |||||||||| |||| 
Sbjct: 196 cctcttgggtcctatattcgttctctggactctcatattcatcctctgagtcttcctctc 137

                     
Query: 519 aagtcctata 528
            |||||||||
Sbjct: 136 gagtcctata 127



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 51/58 (87%), Gaps = 3/58 (5%)
 Strand = Plus / Minus

                                                                     
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctc 653
           ||||||||||| ||||| ||||||| |   ||||||| ||||||||||||||||||||
Sbjct: 251 tattcgtcttccaggatcccatattca---tcttctagggtttcatattcgtcctctc 197



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           |||||||||| || |||||||||||| |||||||||||||
Sbjct: 166 tctcatattcatcctctgagtcttcctctcgagtcctata 127



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 356 tcttcttctgagtcttcctctaaagtaccatatt 389
           |||||||||||||||||||||| ||| |||||||
Sbjct: 356 tcttcttctgagtcttcctctagagttccatatt 323



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| |||||||||||||||||||||||
Sbjct: 446 gggcttccatattcgtcttctgagtcttc 418



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 416 tctgagtcttcttctaaagtcccatattc 388



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 235 tcccatattcatcttctagggtttcatattcgt 203



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| ||||||| |||||||||||||
Sbjct: 297 ctctgggctcccgtattcttcctctgagtctt 266



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||| ||||| ||||| ||||||||||||||
Sbjct: 174 ctctggactctcatattcatcctctgagtcttc 142



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| ||||||||||||||| || |||| | ||||||
Sbjct: 361 catattcttcttctgagtcttcctctagagttccatattc 322



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 328 catattcgtcctctcgggtc 309



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 521 gtcctatattcgttctctgg 540
           ||||||||||||||||||||
Sbjct: 188 gtcctatattcgttctctgg 169
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>gb|AY174485.1| Oplismenus hirtellus DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 444

 Score =  174 bits (88), Expect = 3e-40
 Identities = 132/149 (88%)
 Strand = Plus / Minus

                                                                       
Query: 241 ccgatctacttctttttggtattttagactaaattcttttgttcctcgatgctcaatcaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 414 ccgatctacttctttttggtattttagactaaattcttttgttcctcgatgctcaataaa 355

                                                                       
Query: 301 accctcnnnnnnnaagatggaatcttcctctgggctctcgtattcgtcctctgagtcttc 360
           ||||||       ||||| ||||||||||| |||||  | |||||||| |||||||||||
Sbjct: 354 accctcttttttgaagatagaatcttcctccgggcttccatattcgtcttctgagtcttc 295

                                        
Query: 361 ttctgagtcttcctctaaagtaccatatt 389
            ||||||||||| |||||||| |||||||
Sbjct: 294 ctctgagtcttcttctaaagtcccatatt 266



 Score =  135 bits (68), Expect = 2e-28
 Identities = 119/136 (87%)
 Strand = Plus / Minus

                                                                       
Query: 416 ccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           |||||||| |||||||| ||||| |||| ||||||||||||||||||| ||||| |||||
Sbjct: 239 ccatattcttcttctgaatcttcctctagagttccatattcgtcctctcgggtcttatat 180

                                                                       
Query: 476 ttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttc 535
           | | |||||||| |||| ||||| || |||||||||||||||| |||||||||||||| |
Sbjct: 179 tcgttctctgggctcccgtattcttcctctgagtctttctctagagtcctatattcgtcc 120

                           
Query: 536 tctgggttcccatatt 551
           ||  || |||||||||
Sbjct: 119 tccaggatcccatatt 104



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 69/83 (83%)
 Strand = Plus / Minus

                                                                       
Query: 491 ccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccatat 550
           |||||||| |||||||| |||| ||||| ||| | |||||||| |||| || ||  ||||
Sbjct: 239 ccatattcttcttctgaatcttcctctagagttccatattcgtcctctcgggtcttatat 180

                                  
Query: 551 ttgttttctgggctcccatattc 573
           | ||| ||||||||||| |||||
Sbjct: 179 tcgttctctgggctcccgtattc 157



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| |||||||||||||||||||||||
Sbjct: 323 gggcttccatattcgtcttctgagtcttc 295



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 293 tctgagtcttcttctaaagtcccatattc 265



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| ||||||| |||||||||||||
Sbjct: 174 ctctgggctcccgtattcttcctctgagtctt 143



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 356 tcttcttctgagtcttcctctaaagtaccatatt 389
           ||||||||||| |||||||||| ||| |||||||
Sbjct: 233 tcttcttctgaatcttcctctagagttccatatt 200



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 205 catattcgtcctctcgggtc 186
to top
>gb|AF372182.1| Otachyrium versicolor DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 555

 Score =  174 bits (88), Expect = 3e-40
 Identities = 131/148 (88%)
 Strand = Plus / Minus

                                                                       
Query: 242 cgatctacttctttttggtattttagactaaattcttttgttcctcgatgctcaatcaaa 301
           ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 524 cgatctacttcttttnggtattttagactaaattcttttgttcctcgatgctcaataaaa 465

                                                                       
Query: 302 ccctcnnnnnnnaagatggaatcttcctctgggctctcgtattcgtcctctgagtcttct 361
           |||||       ||||| ||||||||||| |||||| | |||||||| ||||||||||| 
Sbjct: 464 ccctctttttttaagatagaatcttcctccgggctcccatattcgtcttctgagtcttcc 405

                                       
Query: 362 tctgagtcttcctctaaagtaccatatt 389
           ||||||||||| |||||||| |||||||
Sbjct: 404 tctgagtcttcttctaaagtcccatatt 377



 Score =  145 bits (73), Expect = 2e-31
 Identities = 118/133 (88%)
 Strand = Plus / Minus

                                                                       
Query: 419 tattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatttg 478
           |||||||||||||||||||| |||| ||||||||||||||||||| ||||| |||||| |
Sbjct: 353 tattcgtcttctgagtcttcctctagagttccatattcgtcctctcgggtcttatattcg 294

                                                                       
Query: 479 ctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttctct 538
            |||||||| |||||||||| || | |||||||||||||| |||||||||||||  ||||
Sbjct: 293 ttctctgggctcccatattcttcctttgagtctttctctagagtcctatattcgccctct 234

                        
Query: 539 gggttcccatatt 551
            || |||||||||
Sbjct: 233 aggatcccatatt 221



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                       
Query: 494 tattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccatatttg 553
           ||||| ||||||||||||| ||||| ||| | |||||||| |||| || ||  ||||| |
Sbjct: 353 tattcgtcttctgagtcttcctctagagttccatattcgtcctctcgggtcttatattcg 294

                               
Query: 554 ttttctgggctcccatattc 573
           || |||||||||||||||||
Sbjct: 293 ttctctgggctcccatattc 274



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 671 ttctanggtctcatattcctcttctgagtcttccgctcgagtcctata 718
           ||||| ||| |||||||| || |||||||||||| |||||||||||||
Sbjct: 216 ttctagggtttcatattcgtcctctgagtcttcctctcgagtcctata 169



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| |||||||||||||||||||||||
Sbjct: 434 gggctcccatattcgtcttctgagtcttc 406



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 404 tctgagtcttcttctaaagtcccatattc 376



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 229 tcccatattcatcttctagggtttcatattcgt 197



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 626 tcttctanggtttcatattcgtcctct 652
           ||||||| |||||||||||||||||||
Sbjct: 218 tcttctagggtttcatattcgtcctct 192



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 359 tcttctgagtcttcctctaaagtaccatatt 389
           ||||||||||||||||||| ||| |||||||
Sbjct: 347 tcttctgagtcttcctctagagttccatatt 317



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 489 tcccatattcctcttctgagtctttctct 517
           |||||||||| ||||||||||||| ||||
Sbjct: 430 tcccatattcgtcttctgagtcttcctct 402



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 322 catattcgtcctctcgggtc 303



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 341 tattcgtcctctgagtcttc 360
           ||||||||||||||||||||
Sbjct: 203 tattcgtcctctgagtcttc 184
to top
>gb|AF372181.1| Ophiochloa hydrolithica DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 429

 Score =  174 bits (88), Expect = 3e-40
 Identities = 132/149 (88%)
 Strand = Plus / Minus

                                                                       
Query: 241 ccgatctacttctttttggtattttagactaaattcttttgttcctcgatgctcaatcaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 414 ccgatctacttctttttggtattttagactaaattcttttgttcctcgatgctcaataaa 355

                                                                       
Query: 301 accctcnnnnnnnaagatggaatcttcctctgggctctcgtattcgtcctctgagtcttc 360
           ||||||       ||||| ||||||||||| |||||  | |||||||| |||||||||||
Sbjct: 354 accctcttttttgaagatagaatcttcctccgggcttccatattcgtcttctgagtcttc 295

                                        
Query: 361 ttctgagtcttcctctaaagtaccatatt 389
            ||||||||||| |||||||| |||||||
Sbjct: 294 ctctgagtcttcttctaaagtcccatatt 266



 Score =  135 bits (68), Expect = 2e-28
 Identities = 119/136 (87%)
 Strand = Plus / Minus

                                                                       
Query: 416 ccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           |||||||| |||||||| ||||| |||| ||||||||||||||||||| ||||| |||||
Sbjct: 239 ccatattcttcttctgaatcttcctctagagttccatattcgtcctctcgggtcttatat 180

                                                                       
Query: 476 ttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttc 535
           | | |||||||| |||| ||||| || |||||||||||||||| |||||||||||||| |
Sbjct: 179 tcgttctctgggctcccgtattcttcctctgagtctttctctagagtcctatattcgtcc 120

                           
Query: 536 tctgggttcccatatt 551
           ||  || |||||||||
Sbjct: 119 tccaggatcccatatt 104



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 69/83 (83%)
 Strand = Plus / Minus

                                                                       
Query: 491 ccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccatat 550
           |||||||| |||||||| |||| ||||| ||| | |||||||| |||| || ||  ||||
Sbjct: 239 ccatattcttcttctgaatcttcctctagagttccatattcgtcctctcgggtcttatat 180

                                  
Query: 551 ttgttttctgggctcccatattc 573
           | ||| ||||||||||| |||||
Sbjct: 179 tcgttctctgggctcccgtattc 157



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| |||||||||||||||||||||||
Sbjct: 323 gggcttccatattcgtcttctgagtcttc 295



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 293 tctgagtcttcttctaaagtcccatattc 265



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| ||||||| |||||||||||||
Sbjct: 174 ctctgggctcccgtattcttcctctgagtctt 143



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 356 tcttcttctgagtcttcctctaaagtaccatatt 389
           ||||||||||| |||||||||| ||| |||||||
Sbjct: 233 tcttcttctgaatcttcctctagagttccatatt 200



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 205 catattcgtcctctcgggtc 186
to top
>gb|U96318.1|MLU96318 Micraira lazaridisii RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 465

 Score =  174 bits (88), Expect = 3e-40
 Identities = 196/232 (84%)
 Strand = Plus / Minus

                                                                       
Query: 320 gaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaa 379
           |||||||||||||||||| | |||||||||||||||||||| ||||||||||| ||||||
Sbjct: 447 gaatcttcctctgggctcccatattcgtcctctgagtcttcctctgagtcttcttctaaa 388

                                                                       
Query: 380 gtaccatatttttcctcgccgctttccccggggctgccatattcgtcttctgagtcttct 439
           || |||||||  | |||   ||  ||  | ||||| |||||||| |||||||||||||||
Sbjct: 387 gtcccatattcgttctctgagccatcttcagggctcccatattcttcttctgagtcttct 328

                                                                       
Query: 440 tctaaagttccatattcgtcctcttgggtcctatatttgctctctgggttcccatattcc 499
           |||| ||||||||||||||||||| ||||  |||||| | | |||||| |||||||||  
Sbjct: 327 tctagagttccatattcgtcctctcgggtgttatattcgttttctgggctcccatattgt 268

                                                               
Query: 500 tcttctgagtctttctctaaagtcctatattcgttctctgggttcccatatt 551
           || ||||||||||||  |  |||||||||||||| |||| || |||||||||
Sbjct: 267 tcctctgagtctttccatggagtcctatattcgtcctctaggatcccatatt 216



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 79/93 (84%), Gaps = 1/93 (1%)
 Strand = Plus / Minus

                                                                       
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
           ||||||| ||||| |||| |||||||||||||||| |||| |||  |||  | |||||||
Sbjct: 171 tcttctagggttttatatccgtcctctcgggtcctatatt-cgttctctgggctctcata 113

                                            
Query: 686 ttcctcttctgagtcttccgctcgagtcctata 718
           ||| || ||||| |||||| |||||||||||||
Sbjct: 112 ttcgtcctctgaatcttcctctcgagtcctata 80



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 71/84 (84%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| |||||||||||||  |||| ||| | |||||||| |||| || |   ||
Sbjct: 353 tcccatattcttcttctgagtcttcttctagagttccatattcgtcctctcgggtgttat 294

                                   
Query: 549 atttgttttctgggctcccatatt 572
           ||| ||||||||||||||||||||
Sbjct: 293 attcgttttctgggctcccatatt 270



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 66/78 (84%)
 Strand = Plus / Minus

                                                                       
Query: 451 atattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtc 510
           |||| |||||||| |||||||||||| | |||||||| || ||||||| || ||||| ||
Sbjct: 157 atatccgtcctctcgggtcctatattcgttctctgggctctcatattcgtcctctgaatc 98

                             
Query: 511 tttctctaaagtcctata 528
           || ||||  |||||||||
Sbjct: 97  ttcctctcgagtcctata 80



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 60/71 (84%), Gaps = 3/71 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |   ||||||| |||||||||||||| |||| | 
Sbjct: 240 tattcgtcctctaggatcccatattca---tcttctagggtttcatattcgttctctaga 184

                      
Query: 656 gtcctgtattc 666
           ||||| |||||
Sbjct: 183 gtcctatattc 173



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 224 tcccatattcatcttctagggtttcatattcgt 192



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| |||||||||||||| |||||
Sbjct: 127 ctctgggctctcatattcgtcctctgaatcttc 95



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 521 gtcctatattcgttctctgggttcccatatt 551
           ||||||||||||||||||||| || ||||||
Sbjct: 141 gtcctatattcgttctctgggctctcatatt 111



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 625 ttcttctanggtttcatattcgtcctctcgggt 657
           ||||||||  ||| |||||||||||||||||||
Sbjct: 331 ttcttctagagttccatattcgtcctctcgggt 299
to top
>gb|U95082.1|MPU95082 Monachather paradoxus RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 443

 Score =  174 bits (88), Expect = 3e-40
 Identities = 193/228 (84%)
 Strand = Plus / Minus

                                                                       
Query: 324 cttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtac 383
           |||| ||||||||| | |||||||||||||||||||| || |||||||| |||||||| |
Sbjct: 443 cttcttctgggctcccatattcgtcctctgagtcttcctcagagtcttcttctaaagtcc 384

                                                                       
Query: 384 catatttttcctcgccgctttccccggggctgccatattcgtcttctgagtcttcttcta 443
           ||||||  | |||   ||  ||  | ||||| |||||||| ||||||||||||||| |||
Sbjct: 383 catattcgttctctgagccatcttcagggctcccatattcttcttctgagtcttctccta 324

                                                                       
Query: 444 aagttccatattcgtcctcttgggtcctatatttgctctctgggttcccatattcctctt 503
            ||||||||||||||||||| ||||| |||||| | | |||||| |||| ||||| || |
Sbjct: 323 gagttccatattcgtcctctcgggtcttatattcgttttctgggctcccgtattcttcct 264

                                                           
Query: 504 ctgagtctttctctaaagtcctatattcgttctctgggttcccatatt 551
           ||||||||||||||| |||||||||||||| |||| || |||||||||
Sbjct: 263 ctgagtctttctctagagtcctatattcgtcctctaggatcccatatt 216



 Score = 93.7 bits (47), Expect = 8e-16
 Identities = 82/93 (88%), Gaps = 1/93 (1%)
 Strand = Plus / Minus

                                                                       
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
           ||||||| ||||||||||||||||||||||||||| |||| |||  |||  | |||||||
Sbjct: 171 tcttctagggtttcatattcgtcctctcgggtcctatatt-cgttctctgggctctcata 113

                                            
Query: 686 ttcctcttctgagtcttccgctcgagtcctata 718
           ||| || |||||||||||| |||||||||||||
Sbjct: 112 ttcgtcctctgagtcttcctctcgagtcctata 80



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 79/92 (85%)
 Strand = Plus / Minus

                                                                       
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatttgctctctgggttcccatat 496
           |||||||  ||| |||||||||||||| |||||||||||| | |||||||| || |||||
Sbjct: 171 tcttctagggtttcatattcgtcctctcgggtcctatattcgttctctgggctctcatat 112

                                           
Query: 497 tcctcttctgagtctttctctaaagtcctata 528
           || || |||||||||| ||||  |||||||||
Sbjct: 111 tcgtcctctgagtcttcctctcgagtcctata 80



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 71/85 (83%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| |||||||||||||   ||| ||| | |||||||| |||| || ||  ||
Sbjct: 353 tcccatattcttcttctgagtcttctcctagagttccatattcgtcctctcgggtcttat 294

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||||||||||||||| |||||
Sbjct: 293 attcgttttctgggctcccgtattc 269



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||||| ||||||||||||||||||||
Sbjct: 224 tcccatattcgtcttctagggtttcatattcgt 192



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| ||||||||||||||||||||
Sbjct: 127 ctctgggctctcatattcgtcctctgagtcttc 95



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 54/63 (85%), Gaps = 1/63 (1%)
 Strand = Plus / Minus

                                                                       
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
           ||||||| ||||||||||||||||| | | ||||| |||| ||| ||||| ||| |||||
Sbjct: 213 tcttctagggtttcatattcgtcctgtagagtcctatatt-cgtcttctagggtttcata 155

              
Query: 686 ttc 688
           |||
Sbjct: 154 ttc 152



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 568 atattcgttttctagggtttcatattcgt 596
           |||||||| ||||||||||||||||||||
Sbjct: 178 atattcgtcttctagggtttcatattcgt 150



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 69/83 (83%), Gaps = 1/83 (1%)
 Strand = Plus / Minus

                                                                       
Query: 639 catattcgtcctctcgggtcctgtattccgtgttctanggtctcatattcctcttctgag 698
           |||||||||||||||||||| | |||| ||| ||||  | || | ||||| || ||||||
Sbjct: 317 catattcgtcctctcgggtcttatatt-cgttttctgggctcccgtattcttcctctgag 259

                                  
Query: 699 tcttccgctcgagtcctatattc 721
           |||| | || |||||||||||||
Sbjct: 258 tctttctctagagtcctatattc 236



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 521 gtcctatattcgttctctgggttcccatatt 551
           ||||||||||||||||||||| || ||||||
Sbjct: 141 gtcctatattcgttctctgggctctcatatt 111



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 556 ttctgggctcccatattcgt 575
           ||||||||||||||||||||
Sbjct: 439 ttctgggctcccatattcgt 420



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                       
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||||| ||||||||||| |||  ||| | ||| || |||||| |||||| |||||
Sbjct: 116 catattcgtcctctgagtcttcctctcgagtcctatactcttcctctcgggtccgatatt 57
to top
>gb|AY174498.1| Sorghum halepense DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 616

 Score =  172 bits (87), Expect = 1e-39
 Identities = 122/136 (89%)
 Strand = Plus / Minus

                                                                       
Query: 241 ccgatctacttctttttggtattttagactaaattcttttgttcctcgatgctcaatcaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 586 ccgatctacttctttttggtattttagactaaattcttttgttcctcgatgctcaataaa 527

                                                                       
Query: 301 accctcnnnnnnnaagatggaatcttcctctgggctctcgtattcgtcctctgagtcttc 360
           ||||||       ||||| ||||||||||| |||||| | |||||||| |||||||||||
Sbjct: 526 accctctttttttaagatagaatcttcctccgggctcccatattcgtcttctgagtcttc 467

                           
Query: 361 ttctgagtcttcctct 376
            |||||||||||||||
Sbjct: 466 ctctgagtcttcctct 451



 Score =  101 bits (51), Expect = 3e-18
 Identities = 81/91 (89%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||||| ||||| || |||||||||| || ||||||||||||||||
Sbjct: 350 cctctcgggtcctatatttgttctctaggctcccatattcttcctctgagtctttctcta 291

                                          
Query: 519 aagtcctatattcgttctctgggttcccata 549
            |||||||||||||| |||| || |||||||
Sbjct: 290 gagtcctatattcgtcctctaggatcccata 260



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 62/70 (88%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||||| |||||||| || ||||||| ||||||||||||| |||| 
Sbjct: 185 cctctcgggtcctatatttgttctctgggctctcatattcgtcttctgagtcttcctctc 126

                     
Query: 519 aagtcctata 528
            |||||||||
Sbjct: 125 gagtcctata 116



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           |||||||||| ||||||||||||||| |||||||||||||
Sbjct: 155 tctcatattcgtcttctgagtcttcctctcgagtcctata 116



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                      
Query: 347 tcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           |||||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 468 tcctctgagtcttcctctgagtcttcttctaaagtcccatatt 426



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattc 666
           ||||||| ||||||||||||||||||| | ||||| |||||
Sbjct: 255 tcttctagggtttcatattcgtcctctagagtcctatattc 215



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| |||||||||||||||||||||||
Sbjct: 495 gggctcccatattcgtcttctgagtcttc 467



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 453 tctgagtcttcttctaaagtcccatattc 425



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| |||||||| |||||||||||
Sbjct: 163 ctctgggctctcatattcgtcttctgagtcttc 131



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                       
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||||||||||||||||| |||  ||| | ||| || |||||| |||||| |||||
Sbjct: 152 catattcgtcttctgagtcttcctctcgagtcctatactcttcctctcgggtccgatatt 93



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 489 tcccatattcctcttctgagtctttctcta 518
           |||||||||| ||||||||||||| |||||
Sbjct: 401 tcccatattcttcttctgagtcttcctcta 372



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 356 tcttcttctgagtcttcctcta 377
           ||||||||||||||||||||||
Sbjct: 393 tcttcttctgagtcttcctcta 372



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 489 tcccatattcctcttctgagtctttctct 517
           |||||||||| ||||||||||||| ||||
Sbjct: 491 tcccatattcgtcttctgagtcttcctct 463



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctct 463
           |||| |||||||| || ||||||||||  |||| ||| | |||||||||||||
Sbjct: 323 ggctcccatattcttcctctgagtctttctctagagtcctatattcgtcctct 271



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           ||||||| || | ||||||||||||||||||||
Sbjct: 266 tcccatactcatcttctagggtttcatattcgt 234



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 596 tattcgtcttctaggattccatatt 620
           |||||||||||||||||| ||||||
Sbjct: 219 tattcgtcttctaggatttcatatt 195



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| || |||||||||| | || |||||||||||||
Sbjct: 317 catattcttcctctgagtctttctctagagtcctatattc 278



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 255 tcttctagggtttcatattcgtcctctagagtcctatatt 216



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 568 atattcgttttctagggtttcatattcg 595
           |||||||| ||||||| |||||||||||
Sbjct: 220 atattcgtcttctaggatttcatattcg 193
to top
>gb|U90828.1|SZU90828 Stipagrostis zeyheri subsp. zeyheri RNA polymerase beta-subunit
           (rpoC2) gene, chloroplast gene encoding chloroplast
           protein, partial cds
          Length = 455

 Score =  172 bits (87), Expect = 1e-39
 Identities = 225/271 (83%)
 Strand = Plus / Minus

                                                                       
Query: 326 tcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtacca 385
           |||||||||||| | ||||| |||||||  ||||| ||||||| ||| |||||||| |||
Sbjct: 452 tcctctgggctcccatattcatcctctggttcttcctctgagttttcttctaaagtccca 393

                                                                       
Query: 386 tatttttcctcgccgctttccccggggctgccatattcgtcttctgagtcttcttctaaa 445
           ||||  | |||   ||  ||  | ||||| |||||||| |||||||||||||| |||| |
Sbjct: 392 tattcgttctctgagccatcttcagggctcccatattcttcttctgagtcttcctctaga 333

                                                                       
Query: 446 gttccatattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttct 505
           |||||||||||||||| | ||||| |||||| | ||||||||||| | || || || | |
Sbjct: 332 gttccatattcgtcctttcgggtcttatattcgttctctgggttctcgtagtcttcctgt 273

                                                                       
Query: 506 gagtctttctctaaagtcctatattcgttctctgggttcccatatttgttttctgggctc 565
           ||||||||||||| |||||||||||||| |||| || ||| ||||| ||  ||| || ||
Sbjct: 272 gagtctttctctagagtcctatattcgtcctctaggatcctatattcgtcctctaggatc 213

                                          
Query: 566 ccatattcgttttctagggtttcatattcgt 596
           |||||||||| ||||||||||||||||||||
Sbjct: 212 ccatattcgtcttctagggtttcatattcgt 182



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 58/64 (90%)
 Strand = Plus / Minus

                                                                       
Query: 449 ccatattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgag 508
           ||||||||||||||| |||||||||||| | |||||||| || |||||||||| ||||||
Sbjct: 170 ccatattcgtcctctagggtcctatattcgttctctgggatctcatattcctcctctgag 111

               
Query: 509 tctt 512
           ||||
Sbjct: 110 tctt 107



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 69/80 (86%), Gaps = 1/80 (1%)
 Strand = Plus / Minus

                                                                       
Query: 639 catattcgtcctctcgggtcctgtattccgtgttctanggtctcatattcctcttctgag 698
           |||||||||||||| ||||||| ||||| ||  |||  | ||||||||||||| ||||||
Sbjct: 169 catattcgtcctctagggtcctatattc-gttctctgggatctcatattcctcctctgag 111

                               
Query: 699 tcttccgctcgagtcctata 718
           |||||  |||||||||||||
Sbjct: 110 tcttcttctcgagtcctata 91



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 328 ctctgggctctcgtattcgtcctctgagtcttcttct 364
           ||||||| |||| ||||| ||||||||||||||||||
Sbjct: 138 ctctgggatctcatattcctcctctgagtcttcttct 102



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 626 tcttctanggtttcatattcgtcctct 652
           ||||||| |||||||||||||||||||
Sbjct: 203 tcttctagggtttcatattcgtcctct 177



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 521 gtcctatattcgttctctgggttcccatatt 551
           ||||||||||||||||||||| || ||||||
Sbjct: 152 gtcctatattcgttctctgggatctcatatt 122



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| ||||||||||||||| || |||| | ||||||
Sbjct: 361 catattcttcttctgagtcttcctctagagttccatattc 322
to top
>gb|L25380.1|LHHCPRPOC2 Lophatherum gracile chloroplast RNA polymerase beta-subunit (rpoC2)
           gene, partial cds
          Length = 459

 Score =  170 bits (86), Expect = 4e-39
 Identities = 200/238 (84%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           |||||||||||||||||| ||||| | |||||||| ||||||||||| ||||||||||| 
Sbjct: 442 aagatggaatcttcctctaggctcccatattcgtcttctgagtcttcctctgagtcttct 383

                                                                       
Query: 374 tctaaagtaccatatttttcctcgccgctttccccggggctgccatattcgtcttctgag 433
           |||||||| |||||||  | |||   ||  ||  | ||||| | |||||| |||||||||
Sbjct: 382 tctaaagtcccatattcgttctctgagccatcttcagggctcctatattcttcttctgag 323

                                                                       
Query: 434 tcttcttctaaagttccatattcgtcctcttgggtcctatatttgctctctgggttccca 493
           ||||| |||| ||||||||||||||||||| ||||| |||||| | |||| ||| | |||
Sbjct: 322 tcttcctctagagttccatattcgtcctctcgggtcttatattcgttctcagggctacca 263

                                                                     
Query: 494 tattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccatatt 551
           ||||| || ||||||||||| |||| |||||||||||||| |||| || |||| ||||
Sbjct: 262 tattcttcctctgagtctttttctagagtcctatattcgtcctctaggatcccgtatt 205



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                
Query: 328 ctctgggctctcgtattcgtcctctgagtcttcttct 364
           |||||||||||| ||||||||||||| ||||||||||
Sbjct: 158 ctctgggctctcatattcgtcctctgcgtcttcttct 122



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 67/81 (82%)
 Strand = Plus / Minus

                                                                       
Query: 493 atattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccatattt 552
           |||||| ||||||||||||| ||||| ||| | |||||||| |||| || ||  ||||| 
Sbjct: 338 atattcttcttctgagtcttcctctagagttccatattcgtcctctcgggtcttatattc 279

                                
Query: 553 gttttctgggctcccatattc 573
           ||| || ||||| ||||||||
Sbjct: 278 gttctcagggctaccatattc 258



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 76/93 (81%), Gaps = 1/93 (1%)
 Strand = Plus / Minus

                                                                       
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
           ||||||| ||||||||||||| |||| ||| |||| |||| | |  |||  | |||||||
Sbjct: 202 tcttctagggtttcatattcgccctcccggatcctatatt-cattctctgggctctcata 144

                                            
Query: 686 ttcctcttctgagtcttccgctcgagtcctata 718
           ||| || |||| ||||||  |||||||||||||
Sbjct: 143 ttcgtcctctgcgtcttcttctcgagtcctata 111



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 306 catattcgtcctctcgggtc 287



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 564 tcccatattcgttttctagggtttcatattcg 595
           |||| ||||| | |||||||||||||||||||
Sbjct: 213 tcccgtattcatcttctagggtttcatattcg 182
to top
>gb|U95075.1|MGU95075 Merxmuellera guillarmodae RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 494

 Score =  167 bits (84), Expect = 6e-38
 Identities = 207/248 (83%), Gaps = 9/248 (3%)
 Strand = Plus / Minus

                                                                       
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcc 470
           |||| |||||||| |||||| ||||||| || | | ||||||||||||||||||||||| 
Sbjct: 398 ggctcccatattcttcttctaagtcttcctcgagaattccatattcgtcctcttgggtct 339

                                                                       
Query: 471 tatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||| | |||||||| |||||||||| || |||||||||||||||| |||||||||||
Sbjct: 338 tatattggttctctgggctcccatattcttcctctgagtctttctctagagtcctatatt 279

                                                                       
Query: 531 cgttctctgggttcccatatttgttttctgggctcccatattcgttttctagggtttcat 590
           ||| |||| || |||| |||| || |||| || |  ||||||||| |||||| |||||| 
Sbjct: 278 cgtcctctaggatcccgtattcgtcttctaggatttcatattcgtcttctagagtttca- 220

                                                                       
Query: 591 attcgtattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcct 650
                |||||||| |||||||| ||||||| |   ||||||  ||||||||||||||| |
Sbjct: 219 -----tattcgtcctctaggatcccatattca---tcttctcgggtttcatattcgtctt 168

                   
Query: 651 ctcgggtc 658
           ||||||||
Sbjct: 167 ctcgggtc 160



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 72/81 (88%), Gaps = 1/81 (1%)
 Strand = Plus / Minus

                                                                       
Query: 638 tcatattcgtcctctcgggtcctgtattccgtgttctanggtctcatattcctcttctga 697
           |||||||| |||||||||||| | ||||| || ||||| | |||||||||| ||||||||
Sbjct: 138 tcatattcttcctctcgggtcttatattc-gtcttctaggctctcatattcttcttctga 80

                                
Query: 698 gtcttccgctcgagtcctata 718
           ||||||| |||||||||||||
Sbjct: 79  gtcttcctctcgagtcctata 59



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 47/50 (94%)
 Strand = Plus / Minus

                                                             
Query: 327 cctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctct 376
           ||||||||||| | |||||||||||||||||||| |||||||||||||||
Sbjct: 494 cctctgggctcccatattcgtcctctgagtcttcctctgagtcttcctct 445



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                      
Query: 347 tcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           |||||||||||||| ||||||||||| |||||||  |||||||
Sbjct: 462 tcctctgagtcttcctctgagtcttcttctaaagccccatatt 420



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 428 tctgagtcttcttctaaagttccatattcgtcctct 463
           |||||||||||||||||||  |||||||||| ||||
Sbjct: 447 tctgagtcttcttctaaagccccatattcgttctct 412



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 65/79 (82%)
 Strand = Plus / Minus

                                                                       
Query: 450 catattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgagt 509
           ||||||| |||||| ||||| |||||| |   ||| || || ||||||| ||||||||||
Sbjct: 137 catattcttcctctcgggtcttatattcgtcttctaggctctcatattcttcttctgagt 78

                              
Query: 510 ctttctctaaagtcctata 528
           ||| ||||  |||||||||
Sbjct: 77  cttcctctcgagtcctata 59



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                      
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           ||||||| |||||||||||||| |||  ||| | ||| || |||||| |||||||||||
Sbjct: 95  catattcttcttctgagtcttcctctcgagtcctatactcttcctctagggtcctatat 37



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                 
Query: 410 gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctct 463
           ||||| |||||||| || ||||||||||  |||| ||| | |||||||||||||
Sbjct: 324 gggctcccatattcttcctctgagtctttctctagagtcctatattcgtcctct 271



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| ||||||||||| |||||||||||
Sbjct: 489 gggctcccatattcgtcctctgagtcttc 461



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 503 tctgagtctttctctaaagtcctatattcgttctctg 539
           ||||||||||  ||||||| || ||||||||||||||
Sbjct: 447 tctgagtcttcttctaaagccccatattcgttctctg 411



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 356 tcttcttctgagtcttcctct 376
           |||||||||||||||||||||
Sbjct: 90  tcttcttctgagtcttcctct 70



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| | ||||| |||||||||||||
Sbjct: 328 ctctgggctcccatattcttcctctgagtctt 297



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| || |||||||||| | || |||||||||||||
Sbjct: 317 catattcttcctctgagtctttctctagagtcctatattc 278
to top
>gb|U94335.1|ASU94335 Amphipogon strictus RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 451

 Score =  163 bits (82), Expect = 1e-36
 Identities = 199/238 (83%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           ||||| |||||||||||||||||| | ||||||||||| |||||||| ||||||||||| 
Sbjct: 445 aagatagaatcttcctctgggctcccatattcgtcctccgagtcttcctctgagtcttct 386

                                                                       
Query: 374 tctaaagtaccatatttttcctcgccgctttccccggggctgccatattcgtcttctgag 433
           |||||||| |||||||  | |||   ||  ||| ||||||| |||||||| |||||||||
Sbjct: 385 tctaaagttccatattcgttctctgagccatcctcggggctcccatattcttcttctgag 326

                                                                       
Query: 434 tcttcttctaaagttccatattcgtcctcttgggtcctatatttgctctctgggttccca 493
           ||||| || | ||||||||||||||||||| ||||| ||||||     |||||  |||| 
Sbjct: 325 tcttcctccagagttccatattcgtcctctcgggtcttatattcatcttctggactcccg 266

                                                                     
Query: 494 tattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccatatt 551
           ||||| || ||||||||||| |||| ||||||||||||||  ||| || |||||||||
Sbjct: 265 tattcttcctctgagtctttttctagagtcctatattcgtcttctaggatcccatatt 208



 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 80/93 (86%), Gaps = 1/93 (1%)
 Strand = Plus / Minus

                                                                       
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
           ||||||| ||||||||||||||||||||||||| | |||| |||  |||  | |||||||
Sbjct: 163 tcttctagggtttcatattcgtcctctcgggtcttatatt-cgttctctgggctctcata 105

                                            
Query: 686 ttcctcttctgagtcttccgctcgagtcctata 718
           ||| || |||||||||||  |||||||||||||
Sbjct: 104 ttcttcctctgagtcttcttctcgagtcctata 72



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 65/76 (85%)
 Strand = Plus / Minus

                                                                       
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatttgctctctgggttcccatat 496
           |||||||  ||| |||||||||||||| ||||| |||||| | |||||||| || |||||
Sbjct: 163 tcttctagggtttcatattcgtcctctcgggtcttatattcgttctctgggctctcatat 104

                           
Query: 497 tcctcttctgagtctt 512
           || || ||||||||||
Sbjct: 103 tcttcctctgagtctt 88



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                
Query: 328 ctctgggctctcgtattcgtcctctgagtcttcttct 364
           |||||||||||| ||||| ||||||||||||||||||
Sbjct: 119 ctctgggctctcatattcttcctctgagtcttcttct 83



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 568 atattcgttttctagggtttcatattcgt 596
           |||||||| ||||||||||||||||||||
Sbjct: 170 atattcgtcttctagggtttcatattcgt 142



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                      
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           ||||||| || |||||||||||||||  ||| | ||| || |||||| |||||||||||
Sbjct: 108 catattcttcctctgagtcttcttctcgagtcctatactcttcctctagggtcctatat 50



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 596 tattcgtcttctaggattccatatt 620
           ||||||||||||||||| |||||||
Sbjct: 232 tattcgtcttctaggatcccatatt 208



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 309 catattcgtcctctcgggtc 290
to top
>gb|U94957.1|MDU94957 Merxmuellera dura RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 465

 Score =  163 bits (82), Expect = 1e-36
 Identities = 252/308 (81%), Gaps = 16/308 (5%)
 Strand = Plus / Minus

                                                                       
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcc 470
           |||| |||||||| |||||| ||||||| || | | ||||||||||||||||| ||||| 
Sbjct: 351 ggctcccatattcttcttctaagtcttcctcgagaattccatattcgtcctctcgggtct 292

                                                                       
Query: 471 tatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||| | |      | |||||||||| || |||||||||||||||| |||||||||||
Sbjct: 291 tatattggtt------gctcccatattcttcctctgagtctttctctagagtcctatatt 238

                                                                       
Query: 531 cgttctctgggttcccatatttgttttctgggctcccatattcgttttctagggtttcat 590
           ||| |||| || |||| |||| || |||| || |  ||||||||| ||||||||||||| 
Sbjct: 237 cgtcctctaggatcccgtattcgtcttctagggtttcatattcgtcttctagggtttca- 179

                                                                       
Query: 591 attcgtattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcct 650
                ||||||||||||||||| ||||||| |   ||||||  |||||| |||||||  |
Sbjct: 178 -----tattcgtcttctaggatcccatattca---tcttctcgggtttcgtattcgtttt 127

                                                                       
Query: 651 ctcgggtcctgtattccgtgttctanggtctcatattcctcttctgagtcttccgctcga 710
           |||||||| | |||| ||| ||||| | |||||||||| ||||||||||||||| |||||
Sbjct: 126 ctcgggtcttatatt-cgtcttctaggctctcatattcttcttctgagtcttcctctcga 68

                   
Query: 711 gtcctata 718
           ||||||||
Sbjct: 67  gtcctata 60



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 54/58 (93%)
 Strand = Plus / Minus

                                                                     
Query: 319 ggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctct 376
           |||||| |||||||||||| | |||||||||||||||||||| |||||||||||||||
Sbjct: 455 ggaatcctcctctgggctcccatattcgtcctctgagtcttcctctgagtcttcctct 398



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                      
Query: 347 tcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           |||||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 415 tcctctgagtcttcctctgagtcttcttctaaagtcccatatt 373



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                          
Query: 428 tctgagtcttcttctaaagttccatattcgt 458
           |||||||||||||||||||| ||||||||||
Sbjct: 400 tctgagtcttcttctaaagtcccatattcgt 370



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| ||||||||||| |||||||||||
Sbjct: 442 gggctcccatattcgtcctctgagtcttc 414



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 356 tcttcttctgagtcttcctct 376
           |||||||||||||||||||||
Sbjct: 91  tcttcttctgagtcttcctct 71



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| || |||||||||| | || |||||||||||||
Sbjct: 276 catattcttcctctgagtctttctctagagtcctatattc 237
to top
>gb|U95127.1|PTU95127 Pentameris thuarii RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 440

 Score =  161 bits (81), Expect = 4e-36
 Identities = 159/185 (85%)
 Strand = Plus / Minus

                                                                       
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcc 470
           |||| |||||||| |||||| ||||||| |||| | ||||||||||||||||| ||||| 
Sbjct: 357 ggctcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggtct 298

                                                                       
Query: 471 tatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||| | |||| ||| |||||||||| || |||||||||||||||| |||||||||||
Sbjct: 297 tatattcgttctccgggctcccatattcttcctctgagtctttctctagagtcctatatt 238

                                                                       
Query: 531 cgttctctgggttcccatatttgttttctgggctcccatattcgttttctagggtttcat 590
           ||| |||| || ||||||||| || |||| || |  ||||||||| |||||||| |||||
Sbjct: 237 cgtcctctaggatcccatattcgtcttctagggtttcatattcgtcttctagggcttcat 178

                
Query: 591 attcg 595
           |||||
Sbjct: 177 attcg 173



 Score = 93.7 bits (47), Expect = 8e-16
 Identities = 82/93 (88%), Gaps = 1/93 (1%)
 Strand = Plus / Minus

                                                                       
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
           ||||||| || |||||||||||||||||||||||  ||||| || ||||| | |||||||
Sbjct: 151 tcttctagggcttcatattcgtcctctcgggtcccatattc-gtcttctaggctctcata 93

                                            
Query: 686 ttcctcttctgagtcttccgctcgagtcctata 718
           |||||| ||| |||||||| |||||||||||||
Sbjct: 92  ttcctcctctaagtcttcctctcgagtcctata 60



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                       
Query: 328 ctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtaccata 387
           |||||||||  | |||||||||||||||||||| ||||||||||| |||||||| |||||
Sbjct: 440 ctctgggcttccatattcgtcctctgagtcttcctctgagtcttcttctaaagtcccata 381

             
Query: 388 tt 389
           ||
Sbjct: 380 tt 379



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||||| ||||||||||||||||||||
Sbjct: 225 tcccatattcgtcttctagggtttcatattcgt 193



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                               
Query: 428 tctgagtcttcttctaaagttccatattcgtcctct 463
           |||||||||||||||||||| |||||||||| ||||
Sbjct: 406 tctgagtcttcttctaaagtcccatattcgttctct 371



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 503 tctgagtctttctctaaagtcctatattcgttctctg 539
           ||||||||||  |||||||||| ||||||||||||||
Sbjct: 406 tctgagtcttcttctaaagtcccatattcgttctctg 370



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 56/67 (83%)
 Strand = Plus / Minus

                                                                       
Query: 410 gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtc 469
           ||||| |||||||| || ||||||||||  |||| ||| | ||||||||||||| || ||
Sbjct: 283 gggctcccatattcttcctctgagtctttctctagagtcctatattcgtcctctaggatc 224

                  
Query: 470 ctatatt 476
           | |||||
Sbjct: 223 ccatatt 217



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 65/79 (82%)
 Strand = Plus / Minus

                                                                       
Query: 450 catattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgagt 509
           |||||||||||||| |||||| ||||| |   ||| || || |||||||||| ||| |||
Sbjct: 138 catattcgtcctctcgggtcccatattcgtcttctaggctctcatattcctcctctaagt 79

                              
Query: 510 ctttctctaaagtcctata 528
           ||| ||||  |||||||||
Sbjct: 78  cttcctctcgagtcctata 60



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 626 tcttctanggtttcatattcgtcctctcgggtc 658
           ||||||| || |||||||||| |||||||||||
Sbjct: 193 tcttctagggcttcatattcgccctctcgggtc 161



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 567 catattcgttttctagggtttcatattcgt 596
           ||||||||| |||||||| |||||||||||
Sbjct: 159 catattcgtcttctagggcttcatattcgt 130



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| ||||||||||| |||||||||||
Sbjct: 436 gggcttccatattcgtcctctgagtcttc 408



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 70/85 (82%), Gaps = 5/85 (5%)
 Strand = Plus / Minus

                                                                       
Query: 639 catattcgtcctctcgggtcctgtattccgtgttctangg--tctcatattcctcttctg 696
           |||||||||||||||||||| | |||||   |||||  ||  || ||||||| || ||||
Sbjct: 318 catattcgtcctctcgggtcttatattc---gttctccgggctcccatattcttcctctg 262

                                    
Query: 697 agtcttccgctcgagtcctatattc 721
           |||||| | || |||||||||||||
Sbjct: 261 agtctttctctagagtcctatattc 237



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 626 tcttctanggtttcatattcgtc 648
           ||||||| |||||||||||||||
Sbjct: 214 tcttctagggtttcatattcgtc 192
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>gb|AY174480.1| Homolepis isocalycia DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 486

 Score =  159 bits (80), Expect = 2e-35
 Identities = 130/149 (87%)
 Strand = Plus / Minus

                                                                       
Query: 241 ccgatctacttctttttggtattttagactaaattcttttgttcctcgatgctcaatcaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 456 ccgatctacttctttttggtattttagactaaattcttttgttcctcgatgctcaataaa 397

                                                                       
Query: 301 accctcnnnnnnnaagatggaatcttcctctgggctctcgtattcgtcctctgagtcttc 360
           |||||        ||||| ||||||||||| | |||| | ||||| || |||||||||||
Sbjct: 396 accctgtttttttaagatagaatcttcctccgagctcccatattcttcttctgagtcttc 337

                                        
Query: 361 ttctgagtcttcctctaaagtaccatatt 389
            ||||||||||| |||||||| |||||||
Sbjct: 336 ctctgagtcttcttctaaagtcccatatt 308



 Score =  127 bits (64), Expect = 5e-26
 Identities = 116/136 (85%)
 Strand = Plus / Minus

                                                                       
Query: 416 ccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           |||||||| |||||||||||||| ||||||||||| |||||||||||| ||||| |||||
Sbjct: 281 ccatattcttcttctgagtcttcctctaaagttccgtattcgtcctctcgggtcttatat 222

                                                                       
Query: 476 ttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttc 535
           | | |||||||| ||  |||||| || |||||||||| ||||  ||||||||| || | |
Sbjct: 221 tcgttctctgggctcygatattcktcctctgagtcttcctctmgagtcctataytcktcc 162

                           
Query: 536 tctgggttcccatatt 551
           ||| || |||||||||
Sbjct: 161 tctmggrtcccatatt 146



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 71/85 (83%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| ||||||||||||| ||||||||| |  ||||||| |||| || ||  ||
Sbjct: 283 tcccatattcttcttctgagtcttcctctaaagttccgtattcgtcctctcgggtcttat 224

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| |||||||||  ||||||
Sbjct: 223 attcgttctctgggctcygatattc 199



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 356 tcttcttctgagtcttcctctaaagt 381
           ||||||||||||||||||||||||||
Sbjct: 275 tcttcttctgagtcttcctctaaagt 250



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 335 tctgagtcttcttctaaagtcccatattc 307



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 66/81 (81%), Gaps = 1/81 (1%)
 Strand = Plus / Minus

                                                                       
Query: 641 tattcgtcctctcgggtcctgtattccgtgttctanggtctcatattcctcttctgagtc 700
           |||||||||||||||||| | ||||| ||  |||  | ||  |||||| || ||||||||
Sbjct: 245 tattcgtcctctcgggtcttatattc-gttctctgggctcygatattcktcctctgagtc 187

                                
Query: 701 ttccgctcgagtcctatattc 721
           |||| || |||||||||| ||
Sbjct: 186 ttcctctmgagtcctataytc 166



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 489 tcccatattcctcttctgagtctttctct 517
           |||||||||| ||||||||||||| ||||
Sbjct: 361 tcccatattcttcttctgagtcttcctct 333



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 29/33 (87%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           ||||||||||   ||||| ||||||||||||||
Sbjct: 216 ctctgggctcygatattcktcctctgagtcttc 184
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>gb|AY174473.1| Arthropogon villosus DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 513

 Score =  159 bits (80), Expect = 2e-35
 Identities = 122/136 (89%)
 Strand = Plus / Minus

                                                                       
Query: 416 ccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           |||||||| |||||||||||||| |||| ||||||||||||||||||| ||||| |||||
Sbjct: 410 ccatattcttcttctgagtcttcctctagagttccatattcgtcctctcgggtcttatat 351

                                                                       
Query: 476 ttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttc 535
           | | |||||||| |||||||||| || |||||||||||||||| |||||||||||||| |
Sbjct: 350 tcgttctctgggctcccatattcttcctctgagtctttctctagagtcctatattcgtcc 291

                           
Query: 536 tctgggttcccatatt 551
           ||| || |||||||||
Sbjct: 290 tctaggatcccatatt 275



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 73/85 (85%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| ||||||||||||| ||||| ||| | |||||||| |||| || ||  ||
Sbjct: 412 tcccatattcttcttctgagtcttcctctagagttccatattcgtcctctcgggtcttat 353

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| |||||||||||||||||
Sbjct: 352 attcgttctctgggctcccatattc 328



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                       
Query: 320 gaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaa 379
           ||||||||||| | |||| | ||||| || | ||||||||| ||||||||||| ||||||
Sbjct: 506 gaatcttcctccgagctcccatattcttcttntgagtcttcctctgagtcttcgtctaaa 447

                     
Query: 380 gtaccatatt 389
           || |||||||
Sbjct: 446 gtcccatatt 437



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||| | |||||||| || ||||||| || |||||||||| |||| 
Sbjct: 196 cctctcgggtcctatattcgttctctgggctctcatattcgtcctctgagtcttcctctc 137

                     
Query: 519 aagtcctata 528
            |||||||||
Sbjct: 136 gagtcctata 127



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 51/58 (87%), Gaps = 3/58 (5%)
 Strand = Plus / Minus

                                                                     
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctc 653
           |||||||| |||||||| ||||||| |   ||||||| ||||||||||||||||||||
Sbjct: 299 tattcgtcctctaggatcccatattca---tcttctagggtttcatattcgtcctctc 245



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| ||||||||||||||||||||
Sbjct: 174 ctctgggctctcatattcgtcctctgagtcttc 142



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 61/71 (85%), Gaps = 1/71 (1%)
 Strand = Plus / Minus

                                                                       
Query: 648 cctctcgggtcctgtattccgtgttctanggtctcatattcctcttctgagtcttccgct 707
           ||||||||||||| |||| |||  |||  | |||||||||| || |||||||||||| ||
Sbjct: 196 cctctcgggtcctatatt-cgttctctgggctctcatattcgtcctctgagtcttcctct 138

                      
Query: 708 cgagtcctata 718
           |||||||||||
Sbjct: 137 cgagtcctata 127



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 356 tcttcttctgagtcttcctctaaagtaccatatt 389
           |||||||||||||||||||||| ||| |||||||
Sbjct: 404 tcttcttctgagtcttcctctagagttccatatt 371



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 283 tcccatattcatcttctagggtttcatattcgt 251



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 69/83 (83%), Gaps = 1/83 (1%)
 Strand = Plus / Minus

                                                                       
Query: 639 catattcgtcctctcgggtcctgtattccgtgttctanggtctcatattcctcttctgag 698
           |||||||||||||||||||| | |||| |||  |||  | || ||||||| || ||||||
Sbjct: 376 catattcgtcctctcgggtcttatatt-cgttctctgggctcccatattcttcctctgag 318

                                  
Query: 699 tcttccgctcgagtcctatattc 721
           |||| | || |||||||||||||
Sbjct: 317 tctttctctagagtcctatattc 295



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 56/67 (83%)
 Strand = Plus / Minus

                                                                       
Query: 410 gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtc 469
           ||||| |||||||| || ||||||||||  |||| ||| | ||||||||||||| || ||
Sbjct: 341 gggctcccatattcttcctctgagtctttctctagagtcctatattcgtcctctaggatc 282

                  
Query: 470 ctatatt 476
           | |||||
Sbjct: 281 ccatatt 275



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 521 gtcctatattcgttctctgggttcccatatt 551
           ||||||||||||||||||||| || ||||||
Sbjct: 188 gtcctatattcgttctctgggctctcatatt 158



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           ||||||||||| |||||||| ||||||||
Sbjct: 464 tctgagtcttcgtctaaagtcccatattc 436



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 596 tattcgtcttctaggattccatatt 620
           |||||||||||||||||| ||||||
Sbjct: 230 tattcgtcttctaggatttcatatt 206



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| ||||||||||||||| || |||| | ||||||
Sbjct: 409 catattcttcttctgagtcttcctctagagttccatattc 370



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| | ||||| |||||||||||||
Sbjct: 345 ctctgggctcccatattcttcctctgagtctt 314



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 568 atattcgttttctagggtttcatattcg 595
           |||||||| ||||||| |||||||||||
Sbjct: 231 atattcgtcttctaggatttcatattcg 204



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                       
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||||| ||||||||||| |||  ||| | ||| || |||||| |||||| |||||
Sbjct: 163 catattcgtcctctgagtcttcctctcgagtcctatactcttcctctcgggtccgatatt 104
to top
>gb|U96314.1|RNU96314 Rytidosperma nudiflora RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 510

 Score =  159 bits (80), Expect = 2e-35
 Identities = 206/248 (83%), Gaps = 9/248 (3%)
 Strand = Plus / Minus

                                                                       
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcc 470
           |||| |||||||| |||||| ||||||| || | | |||||||||||||||||||| || 
Sbjct: 395 ggctcccatattcttcttctaagtcttcctcgagaattccatattcgtcctcttggatct 336

                                                                       
Query: 471 tatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||| | |||||||| |||||||||| || |||||||||||||||| |||||||||||
Sbjct: 335 tatattggttctctgggctcccatattcttcctctgagtctttctctagagtcctatatt 276

                                                                       
Query: 531 cgttctctgggttcccatatttgttttctgggctcccatattcgttttctagggtttcat 590
           ||| |||| || |||| |||| || |||| || |  ||||||||| |||||| |||||| 
Sbjct: 275 cgtcctctaggatcccgtattcgtcttctaggatttcatattcgtcttctagagtttca- 217

                                                                       
Query: 591 attcgtattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcct 650
                |||||||| |||||||| ||||||| |   ||||||  |||||||||||||||||
Sbjct: 216 -----tattcgtcctctaggatcccatattca---tcttctcgggtttcatattcgtcct 165

                   
Query: 651 ctcgggtc 658
            |||||||
Sbjct: 164 gtcgggtc 157



 Score = 93.7 bits (47), Expect = 8e-16
 Identities = 59/63 (93%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           |||| ||||||||||||||||||| | |||||||||||||||||||| ||||||||||||
Sbjct: 504 aagagggaatcttcctctgggctcccatattcgtcctctgagtcttcctctgagtcttcc 445

              
Query: 374 tct 376
           |||
Sbjct: 444 tct 442



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 72/81 (88%), Gaps = 1/81 (1%)
 Strand = Plus / Minus

                                                                       
Query: 638 tcatattcgtcctctcgggtcctgtattccgtgttctanggtctcatattcctcttctga 697
           |||||||| |||||||||||| | ||||| || ||||| | |||||||||| ||||||||
Sbjct: 135 tcatattcttcctctcgggtcttatattc-gtcttctaggctctcatattcttcttctga 77

                                
Query: 698 gtcttccgctcgagtcctata 718
           ||||||| |||||||||||||
Sbjct: 76  gtcttcctctcgagtcctata 56



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                      
Query: 347 tcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           |||||||||||||| ||||||||||| |||||||  |||||||
Sbjct: 459 tcctctgagtcttcctctgagtcttcttctaaagccccatatt 417



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 428 tctgagtcttcttctaaagttccatattcgtcctct 463
           |||||||||||||||||||  |||||||||| ||||
Sbjct: 444 tctgagtcttcttctaaagccccatattcgttctct 409



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 65/79 (82%)
 Strand = Plus / Minus

                                                                       
Query: 450 catattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgagt 509
           ||||||| |||||| ||||| |||||| |   ||| || || ||||||| ||||||||||
Sbjct: 134 catattcttcctctcgggtcttatattcgtcttctaggctctcatattcttcttctgagt 75

                              
Query: 510 ctttctctaaagtcctata 528
           ||| ||||  |||||||||
Sbjct: 74  cttcctctcgagtcctata 56



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                      
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           ||||||| |||||||||||||| |||  ||| | ||| || |||||| |||||||||||
Sbjct: 92  catattcttcttctgagtcttcctctcgagtcctatactcttcctctagggtcctatat 34



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                 
Query: 410 gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctct 463
           ||||| |||||||| || ||||||||||  |||| ||| | |||||||||||||
Sbjct: 321 gggctcccatattcttcctctgagtctttctctagagtcctatattcgtcctct 268



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| ||||||||||| |||||||||||
Sbjct: 486 gggctcccatattcgtcctctgagtcttc 458



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 503 tctgagtctttctctaaagtcctatattcgttctctg 539
           ||||||||||  ||||||| || ||||||||||||||
Sbjct: 444 tctgagtcttcttctaaagccccatattcgttctctg 408



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 356 tcttcttctgagtcttcctct 376
           |||||||||||||||||||||
Sbjct: 87  tcttcttctgagtcttcctct 67



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| | ||||| |||||||||||||
Sbjct: 325 ctctgggctcccatattcttcctctgagtctt 294



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| || |||||||||| | || |||||||||||||
Sbjct: 314 catattcttcctctgagtctttctctagagtcctatattc 275
to top
>gb|U96313.1|NLU96313 Notodanthonia laevis RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 538

 Score =  159 bits (80), Expect = 2e-35
 Identities = 206/248 (83%), Gaps = 9/248 (3%)
 Strand = Plus / Minus

                                                                       
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcc 470
           |||| |||||||| |||||| ||||||| || | | |||||||||||||||||||| || 
Sbjct: 419 ggctcccatattcttcttctaagtcttcctcgagaattccatattcgtcctcttggatct 360

                                                                       
Query: 471 tatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||| | |||||||| |||||||||| || |||||||||||||||| |||||||||||
Sbjct: 359 tatattggttctctgggctcccatattcttcctctgagtctttctctagagtcctatatt 300

                                                                       
Query: 531 cgttctctgggttcccatatttgttttctgggctcccatattcgttttctagggtttcat 590
           ||| |||| || |||| |||| || |||| || |  ||||||||| |||||| |||||| 
Sbjct: 299 cgtcctctaggatcccgtattcgtcttctaggatttcatattcgtcttctagagtttca- 241

                                                                       
Query: 591 attcgtattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcct 650
                |||||||| |||||||| ||||||| |   ||||||  ||||||||||||||| |
Sbjct: 240 -----tattcgtcctctaggatcccatattca---tcttctcgggtttcatattcgtctt 189

                   
Query: 651 ctcgggtc 658
           ||||||||
Sbjct: 188 ctcgggtc 181



 Score = 93.7 bits (47), Expect = 8e-16
 Identities = 59/63 (93%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           |||| ||||||||||||||||||| | |||||||||||||||||||| ||||||||||||
Sbjct: 528 aagagggaatcttcctctgggctcccatattcgtcctctgagtcttcctctgagtcttcc 469

              
Query: 374 tct 376
           |||
Sbjct: 468 tct 466



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 72/81 (88%), Gaps = 1/81 (1%)
 Strand = Plus / Minus

                                                                       
Query: 638 tcatattcgtcctctcgggtcctgtattccgtgttctanggtctcatattcctcttctga 697
           |||||||| |||||||||||| | ||||| || ||||| | |||||||||| ||||||||
Sbjct: 159 tcatattcttcctctcgggtcttatattc-gtcttctaggctctcatattcttcttctga 101

                                
Query: 698 gtcttccgctcgagtcctata 718
           ||||||| |||||||||||||
Sbjct: 100 gtcttcctctcgagtcctata 80



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                      
Query: 347 tcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           |||||||||||||| ||||||||||| |||||||  |||||||
Sbjct: 483 tcctctgagtcttcctctgagtcttcttctaaagccccatatt 441



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 428 tctgagtcttcttctaaagttccatattcgtcctct 463
           |||||||||||||||||||  |||||||||| ||||
Sbjct: 468 tctgagtcttcttctaaagccccatattcgttctct 433



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 65/79 (82%)
 Strand = Plus / Minus

                                                                       
Query: 450 catattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgagt 509
           ||||||| |||||| ||||| |||||| |   ||| || || ||||||| ||||||||||
Sbjct: 158 catattcttcctctcgggtcttatattcgtcttctaggctctcatattcttcttctgagt 99

                              
Query: 510 ctttctctaaagtcctata 528
           ||| ||||  |||||||||
Sbjct: 98  cttcctctcgagtcctata 80



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                      
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           ||||||| |||||||||||||| |||  ||| | ||| || |||||| |||||||||||
Sbjct: 116 catattcttcttctgagtcttcctctcgagtcctatactcttcctctagggtcctatat 58



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                 
Query: 410 gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctct 463
           ||||| |||||||| || ||||||||||  |||| ||| | |||||||||||||
Sbjct: 345 gggctcccatattcttcctctgagtctttctctagagtcctatattcgtcctct 292



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| ||||||||||| |||||||||||
Sbjct: 510 gggctcccatattcgtcctctgagtcttc 482



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 503 tctgagtctttctctaaagtcctatattcgttctctg 539
           ||||||||||  ||||||| || ||||||||||||||
Sbjct: 468 tctgagtcttcttctaaagccccatattcgttctctg 432



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 356 tcttcttctgagtcttcctct 376
           |||||||||||||||||||||
Sbjct: 111 tcttcttctgagtcttcctct 91



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| | ||||| |||||||||||||
Sbjct: 349 ctctgggctcccatattcttcctctgagtctt 318



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| || |||||||||| | || |||||||||||||
Sbjct: 338 catattcttcctctgagtctttctctagagtcctatattc 299
to top
>gb|U96311.1|UPU96311 Urochlaena pusilla RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 532

 Score =  159 bits (80), Expect = 2e-35
 Identities = 206/248 (83%), Gaps = 9/248 (3%)
 Strand = Plus / Minus

                                                                       
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcc 470
           |||| |||||||| |||||| ||| ||| || | | ||||||||||||||||||||||| 
Sbjct: 415 ggctcccatattcttcttctaagttttcctcgagaattccatattcgtcctcttgggtct 356

                                                                       
Query: 471 tatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||| | |||||||| |||||||||| || |||||||||||||||| |||||||||||
Sbjct: 355 tatattggttctctgggctcccatattcttcctctgagtctttctctagagtcctatatt 296

                                                                       
Query: 531 cgttctctgggttcccatatttgttttctgggctcccatattcgttttctagggtttcat 590
           ||| |||| || |||| |||| || |||| || |  ||||||||| |||||| |||||| 
Sbjct: 295 cgtcctctaggatcccgtattcgtcttctaggatttcatattcgtcttctagagtttca- 237

                                                                       
Query: 591 attcgtattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcct 650
                |||||||| |||||||| ||||||| |   ||||||  ||||||||||||||| |
Sbjct: 236 -----tattcgtcctctaggatcccatattca---tcttctcgggtttcatattcgtctt 185

                   
Query: 651 ctcgggtc 658
           ||||||||
Sbjct: 184 ctcgggtc 177



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 58/63 (92%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           |||| ||||||||| ||||||||| | |||||||||||||||||||| ||||||||||||
Sbjct: 524 aagagggaatcttcttctgggctcccatattcgtcctctgagtcttcctctgagtcttcc 465

              
Query: 374 tct 376
           |||
Sbjct: 464 tct 462



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 71/81 (87%), Gaps = 1/81 (1%)
 Strand = Plus / Minus

                                                                       
Query: 638 tcatattcgtcctctcgggtcctgtattccgtgttctanggtctcatattcctcttctga 697
           |||||||| |||||||||||| | ||||| || ||||| | |||||||||| |||||| |
Sbjct: 155 tcatattcttcctctcgggtcttatattc-gtcttctaggctctcatattcttcttctaa 97

                                
Query: 698 gtcttccgctcgagtcctata 718
           ||||||| |||||||||||||
Sbjct: 96  gtcttcctctcgagtcctata 76



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                      
Query: 347 tcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           |||||||||||||| |||||||||||||||||||  |||||||
Sbjct: 479 tcctctgagtcttcctctgagtcttcctctaaagccccatatt 437



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 503 tctgagtctttctctaaagtcctatattcgttctctg 539
           |||||||||| |||||||| || ||||||||||||||
Sbjct: 464 tctgagtcttcctctaaagccccatattcgttctctg 428



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                 
Query: 410 gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctct 463
           ||||| |||||||| || ||||||||||  |||| ||| | |||||||||||||
Sbjct: 341 gggctcccatattcttcctctgagtctttctctagagtcctatattcgtcctct 288



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| ||||||||||| |||||||||||
Sbjct: 506 gggctcccatattcgtcctctgagtcttc 478



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 556 ttctgggctcccatattcgt 575
           ||||||||||||||||||||
Sbjct: 510 ttctgggctcccatattcgt 491



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 428 tctgagtcttcttctaaagttccatattcgtcctct 463
           ||||||||||| |||||||  |||||||||| ||||
Sbjct: 464 tctgagtcttcctctaaagccccatattcgttctct 429



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| | ||||| |||||||||||||
Sbjct: 345 ctctgggctcccatattcttcctctgagtctt 314



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| || |||||||||| | || |||||||||||||
Sbjct: 334 catattcttcctctgagtctttctctagagtcctatattc 295
to top
>gb|U96310.1|TUU96310 Tribolium uniolae RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 540

 Score =  159 bits (80), Expect = 2e-35
 Identities = 206/248 (83%), Gaps = 9/248 (3%)
 Strand = Plus / Minus

                                                                       
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcc 470
           |||| |||||||| |||||| ||| ||| || | | ||||||||||||||||||||||| 
Sbjct: 419 ggctcccatattcttcttctaagttttcctcgagaattccatattcgtcctcttgggtct 360

                                                                       
Query: 471 tatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||| | |||||||| |||||||||| || |||||||||||||||| |||||||||||
Sbjct: 359 tatattggttctctgggctcccatattcttcctctgagtctttctctagagtcctatatt 300

                                                                       
Query: 531 cgttctctgggttcccatatttgttttctgggctcccatattcgttttctagggtttcat 590
           ||| |||| || |||| |||| || |||| || |  ||||||||| |||||| |||||| 
Sbjct: 299 cgtcctctaggatcccgtattcgtcttctaggatttcatattcgtcttctagagtttca- 241

                                                                       
Query: 591 attcgtattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcct 650
                |||||||| |||||||| ||||||| |   ||||||  ||||||||||||||| |
Sbjct: 240 -----tattcgtcctctaggatcccatattca---tcttctcgggtttcatattcgtctt 189

                   
Query: 651 ctcgggtc 658
           ||||||||
Sbjct: 188 ctcgggtc 181



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 58/63 (92%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           |||| ||||||||| ||||||||| | |||||||||||||||||||| ||||||||||||
Sbjct: 528 aagagggaatcttcttctgggctcccatattcgtcctctgagtcttcctctgagtcttcc 469

              
Query: 374 tct 376
           |||
Sbjct: 468 tct 466



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 71/81 (87%), Gaps = 1/81 (1%)
 Strand = Plus / Minus

                                                                       
Query: 638 tcatattcgtcctctcgggtcctgtattccgtgttctanggtctcatattcctcttctga 697
           |||||||| |||||||||||| | ||||| || ||||| | |||||||||| |||||| |
Sbjct: 159 tcatattcttcctctcgggtcttatattc-gtcttctaggctctcatattcttcttctaa 101

                                
Query: 698 gtcttccgctcgagtcctata 718
           ||||||| |||||||||||||
Sbjct: 100 gtcttcctctcgagtcctata 80



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                      
Query: 347 tcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           |||||||||||||| |||||||||||||||||||  |||||||
Sbjct: 483 tcctctgagtcttcctctgagtcttcctctaaagccccatatt 441



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 503 tctgagtctttctctaaagtcctatattcgttctctg 539
           |||||||||| |||||||| || ||||||||||||||
Sbjct: 468 tctgagtcttcctctaaagccccatattcgttctctg 432



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                 
Query: 410 gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctct 463
           ||||| |||||||| || ||||||||||  |||| ||| | |||||||||||||
Sbjct: 345 gggctcccatattcttcctctgagtctttctctagagtcctatattcgtcctct 292



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| ||||||||||| |||||||||||
Sbjct: 510 gggctcccatattcgtcctctgagtcttc 482



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 556 ttctgggctcccatattcgt 575
           ||||||||||||||||||||
Sbjct: 514 ttctgggctcccatattcgt 495



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 428 tctgagtcttcttctaaagttccatattcgtcctct 463
           ||||||||||| |||||||  |||||||||| ||||
Sbjct: 468 tctgagtcttcctctaaagccccatattcgttctct 433



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| | ||||| |||||||||||||
Sbjct: 349 ctctgggctcccatattcttcctctgagtctt 318



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| || |||||||||| | || |||||||||||||
Sbjct: 338 catattcttcctctgagtctttctctagagtcctatattc 299
to top
>gb|U95076.1|MMU95076 Merxmuellera macowanii RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 507

 Score =  159 bits (80), Expect = 2e-35
 Identities = 122/136 (89%)
 Strand = Plus / Minus

                                                                       
Query: 416 ccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           |||||||| |||||||||||||| |||| ||||||||||||||||||| ||||| |||||
Sbjct: 393 ccatattcttcttctgagtcttcctctagagttccatattcgtcctctcgggtcttatat 334

                                                                       
Query: 476 ttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttc 535
           | | |||||||| |||||||||| || |||||||||||||||| |||||||||||||| |
Sbjct: 333 tcgttctctgggctcccatattcttcctctgagtctttctctagagtcctatattcgtcc 274

                           
Query: 536 tctgggttcccatatt 551
           ||| || |||||||||
Sbjct: 273 tctaggatcccatatt 258



 Score =  103 bits (52), Expect = 8e-19
 Identities = 70/76 (92%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           ||||| |||||||||||||||||| | |||||||||||||||||||| ||||||||||| 
Sbjct: 495 aagatagaatcttcctctgggctcccatattcgtcctctgagtcttcctctgagtcttct 436

                           
Query: 374 tctaaagtaccatatt 389
           |||||||| |||||||
Sbjct: 435 tctaaagtcccatatt 420



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 76/88 (86%)
 Strand = Plus / Minus

                                                                       
Query: 486 ggttcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcc 545
           ||||||||||||| ||||||||||||| ||||| ||| | |||||||| |||| || || 
Sbjct: 398 ggttcccatattcttcttctgagtcttcctctagagttccatattcgtcctctcgggtct 339

                                       
Query: 546 catatttgttttctgggctcccatattc 573
            ||||| ||| |||||||||||||||||
Sbjct: 338 tatattcgttctctgggctcccatattc 311



 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 80/93 (86%), Gaps = 1/93 (1%)
 Strand = Plus / Minus

                                                                       
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
           ||||||| |||||||||| |||||||| ||||| | ||||| ||  |||| | |||||||
Sbjct: 171 tcttctagggtttcatatccgtcctctagggtcttatattc-gttctctaggctctcata 113

                                            
Query: 686 ttcctcttctgagtcttccgctcgagtcctata 718
           ||| || |||||||||||| |||||||||||||
Sbjct: 112 ttcttcctctgagtcttcctctcgagtcctata 80



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 101/123 (82%), Gaps = 10/123 (8%)
 Strand = Plus / Minus

                                                                       
Query: 564 tcccatattcgttttctagggtttcatattcgtattcgtcttctaggattccatatttag 623
           |||||||||||| |||||||||||||      |||||||| |||||||| ||||||| | 
Sbjct: 266 tcccatattcgtcttctagggtttca------tattcgtcctctaggatcccatattca- 214

                                                                       
Query: 624 attcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctca 683
             ||||||  ||||||||||||||||||| | ||||| |||| ||| ||||| ||| |||
Sbjct: 213 --tcttctcgggtttcatattcgtcctctagagtcctatatt-cgtcttctagggtttca 157

              
Query: 684 tat 686
           |||
Sbjct: 156 tat 154



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                               
Query: 428 tctgagtcttcttctaaagttccatattcgtcctct 463
           |||||||||||||||||||| |||||||||| ||||
Sbjct: 447 tctgagtcttcttctaaagtcccatattcgttctct 412



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 356 tcttcttctgagtcttcctctaaagtaccatatt 389
           |||||||||||||||||||||| ||| |||||||
Sbjct: 387 tcttcttctgagtcttcctctagagttccatatt 354



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 503 tctgagtctttctctaaagtcctatattcgttctctg 539
           ||||||||||  |||||||||| ||||||||||||||
Sbjct: 447 tctgagtcttcttctaaagtcccatattcgttctctg 411



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 69/83 (83%), Gaps = 1/83 (1%)
 Strand = Plus / Minus

                                                                       
Query: 639 catattcgtcctctcgggtcctgtattccgtgttctanggtctcatattcctcttctgag 698
           |||||||||||||||||||| | |||| |||  |||  | || ||||||| || ||||||
Sbjct: 359 catattcgtcctctcgggtcttatatt-cgttctctgggctcccatattcttcctctgag 301

                                  
Query: 699 tcttccgctcgagtcctatattc 721
           |||| | || |||||||||||||
Sbjct: 300 tctttctctagagtcctatattc 278



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 56/67 (83%)
 Strand = Plus / Minus

                                                                       
Query: 410 gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtc 469
           ||||| |||||||| || ||||||||||  |||| ||| | ||||||||||||| || ||
Sbjct: 324 gggctcccatattcttcctctgagtctttctctagagtcctatattcgtcctctaggatc 265

                  
Query: 470 ctatatt 476
           | |||||
Sbjct: 264 ccatatt 258



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| ||||||||||| |||||||||||
Sbjct: 477 gggctcccatattcgtcctctgagtcttc 449



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||| ||||||| ||||| ||||||||||||||
Sbjct: 127 ctctaggctctcatattcttcctctgagtcttc 95



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| ||||||||||||||| || |||| | ||||||
Sbjct: 392 catattcttcttctgagtcttcctctagagttccatattc 353



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| | ||||| |||||||||||||
Sbjct: 328 ctctgggctcccatattcttcctctgagtctt 297
to top
>gb|U94956.1|MDU94956 Merxmuellera disticha RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 504

 Score =  159 bits (80), Expect = 2e-35
 Identities = 206/248 (83%), Gaps = 9/248 (3%)
 Strand = Plus / Minus

                                                                       
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcc 470
           |||| |||||||| |||||| ||||||| || | | ||||||||||||||||| ||||| 
Sbjct: 405 ggctcccatattcttcttctaagtcttcctcgagaattccatattcgtcctctcgggtct 346

                                                                       
Query: 471 tatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||| | |||||||| |||||||||| || |||||||||||||||| |||||||||||
Sbjct: 345 tatattggttctctgggctcccatattcttcctctgagtctttctctagagtcctatatt 286

                                                                       
Query: 531 cgttctctgggttcccatatttgttttctgggctcccatattcgttttctagggtttcat 590
           ||| |||| || |||| |||| || |||| || |  ||||||||| ||||||| ||||| 
Sbjct: 285 cgtcctctaggatcccgtattcgtcttctaggatttcatattcgtcttctaggatttca- 227

                                                                       
Query: 591 attcgtattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcct 650
                |||||||| |||||||| ||||||| |   ||||||  ||||||||||||||| |
Sbjct: 226 -----tattcgtcctctaggatcccatattca---tcttctcgggtttcatattcgtctt 175

                   
Query: 651 ctcgggtc 658
           ||||||||
Sbjct: 174 ctcgggtc 167



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                             
Query: 327 cctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctct 376
           ||||||||||| | ||||| |||||||||||||| |||||||||||||||
Sbjct: 501 cctctgggctcccatattcttcctctgagtcttcctctgagtcttcctct 452



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 78/93 (83%), Gaps = 1/93 (1%)
 Strand = Plus / Minus

                                                                       
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
           ||||||| | | |||||||| |||||||||||| | ||||| || ||||  | |||||||
Sbjct: 157 tcttctaggctctcatattcttcctctcgggtcttatattc-gtcttctgggctctcata 99

                                            
Query: 686 ttcctcttctgagtcttccgctcgagtcctata 718
           ||| ||||||||||||||| |  ||||||||||
Sbjct: 98  ttcttcttctgagtcttcctcgagagtcctata 66



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                      
Query: 347 tcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           |||||||||||||| ||||||| ||| |||||||| |||||||
Sbjct: 469 tcctctgagtcttcctctgagttttcttctaaagtcccatatt 427



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 66/79 (83%)
 Strand = Plus / Minus

                                                                       
Query: 450 catattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgagt 509
           ||||||| |||||| ||||| |||||| |   |||||| || ||||||| ||||||||||
Sbjct: 144 catattcttcctctcgggtcttatattcgtcttctgggctctcatattcttcttctgagt 85

                              
Query: 510 ctttctctaaagtcctata 528
           ||| ||| | |||||||||
Sbjct: 84  cttcctcgagagtcctata 66



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 428 tctgagtcttcttctaaagttccatattcgtcctct 463
           ||||||| |||||||||||| |||||||||| ||||
Sbjct: 454 tctgagttttcttctaaagtcccatattcgttctct 419



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                      
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           ||||||| |||||||||||||| || | ||| | ||| || |||||| |||||||||||
Sbjct: 102 catattcttcttctgagtcttcctcgagagtcctatactcttcctctagggtcctatat 44



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                 
Query: 410 gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctct 463
           ||||| |||||||| || ||||||||||  |||| ||| | |||||||||||||
Sbjct: 331 gggctcccatattcttcctctgagtctttctctagagtcctatattcgtcctct 278



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 515 tctaaagtcctatattcgttctctg 539
           |||||||||| ||||||||||||||
Sbjct: 442 tctaaagtcccatattcgttctctg 418



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| | ||||| |||||||||||||
Sbjct: 335 ctctgggctcccatattcttcctctgagtctt 304



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| || |||||||||| | || |||||||||||||
Sbjct: 324 catattcttcctctgagtctttctctagagtcctatattc 285



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 329 tctgggctctcgtattcgtcctctgagtcttc 360
           ||||||||||| ||||| || |||||||||||
Sbjct: 112 tctgggctctcatattcttcttctgagtcttc 81



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 356 tcttcttctgagtcttcctc 375
           ||||||||||||||||||||
Sbjct: 97  tcttcttctgagtcttcctc 78
to top
>gb|U94955.1|MDU94955 Merxmuellera davyi RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 461

 Score =  159 bits (80), Expect = 2e-35
 Identities = 122/136 (89%)
 Strand = Plus / Minus

                                                                       
Query: 416 ccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           |||||||| |||||||||||||| |||| ||||||||||||||||||| ||||| |||||
Sbjct: 372 ccatattcttcttctgagtcttcctctagagttccatattcgtcctctcgggtcttatat 313

                                                                       
Query: 476 ttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttc 535
           | | |||||||| |||||||||| || |||||||||||||||| |||||||||||||| |
Sbjct: 312 tcgttctctgggctcccatattcttcctctgagtctttctctagagtcctatattcgtcc 253

                           
Query: 536 tctgggttcccatatt 551
           ||| || |||||||||
Sbjct: 252 tctaggatcccatatt 237



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 58/63 (92%)
 Strand = Plus / Minus

                                                                       
Query: 327 cctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtaccat 386
           ||||||||||| | |||||||||||||||||||| ||||||||||| |||||||| ||||
Sbjct: 461 cctctgggctcccatattcgtcctctgagtcttcctctgagtcttcttctaaagtcccat 402

              
Query: 387 att 389
           |||
Sbjct: 401 att 399



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 76/88 (86%)
 Strand = Plus / Minus

                                                                       
Query: 486 ggttcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcc 545
           ||||||||||||| ||||||||||||| ||||| ||| | |||||||| |||| || || 
Sbjct: 377 ggttcccatattcttcttctgagtcttcctctagagttccatattcgtcctctcgggtct 318

                                       
Query: 546 catatttgttttctgggctcccatattc 573
            ||||| ||| |||||||||||||||||
Sbjct: 317 tatattcgttctctgggctcccatattc 290



 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 80/93 (86%), Gaps = 1/93 (1%)
 Strand = Plus / Minus

                                                                       
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
           ||||||| |||||||||| |||||||| ||||| | ||||| ||  |||| | |||||||
Sbjct: 150 tcttctagggtttcatatccgtcctctagggtcttatattc-gttctctaggctctcata 92

                                            
Query: 686 ttcctcttctgagtcttccgctcgagtcctata 718
           ||| || |||||||||||| |||||||||||||
Sbjct: 91  ttcttcctctgagtcttcctctcgagtcctata 59



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 101/123 (82%), Gaps = 10/123 (8%)
 Strand = Plus / Minus

                                                                       
Query: 564 tcccatattcgttttctagggtttcatattcgtattcgtcttctaggattccatatttag 623
           |||||||||||| |||||||||||||      |||||||| |||||||| ||||||| | 
Sbjct: 245 tcccatattcgtcttctagggtttca------tattcgtcctctaggatcccatattca- 193

                                                                       
Query: 624 attcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctca 683
             ||||||  ||||||||||||||||||| | ||||| |||| ||| ||||| ||| |||
Sbjct: 192 --tcttctcgggtttcatattcgtcctctagagtcctatatt-cgtcttctagggtttca 136

              
Query: 684 tat 686
           |||
Sbjct: 135 tat 133



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                               
Query: 428 tctgagtcttcttctaaagttccatattcgtcctct 463
           |||||||||||||||||||| |||||||||| ||||
Sbjct: 426 tctgagtcttcttctaaagtcccatattcgttctct 391



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 356 tcttcttctgagtcttcctctaaagtaccatatt 389
           |||||||||||||||||||||| ||| |||||||
Sbjct: 366 tcttcttctgagtcttcctctagagttccatatt 333



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 503 tctgagtctttctctaaagtcctatattcgttctctg 539
           ||||||||||  |||||||||| ||||||||||||||
Sbjct: 426 tctgagtcttcttctaaagtcccatattcgttctctg 390



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 69/83 (83%), Gaps = 1/83 (1%)
 Strand = Plus / Minus

                                                                       
Query: 639 catattcgtcctctcgggtcctgtattccgtgttctanggtctcatattcctcttctgag 698
           |||||||||||||||||||| | |||| |||  |||  | || ||||||| || ||||||
Sbjct: 338 catattcgtcctctcgggtcttatatt-cgttctctgggctcccatattcttcctctgag 280

                                  
Query: 699 tcttccgctcgagtcctatattc 721
           |||| | || |||||||||||||
Sbjct: 279 tctttctctagagtcctatattc 257



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 56/67 (83%)
 Strand = Plus / Minus

                                                                       
Query: 410 gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtc 469
           ||||| |||||||| || ||||||||||  |||| ||| | ||||||||||||| || ||
Sbjct: 303 gggctcccatattcttcctctgagtctttctctagagtcctatattcgtcctctaggatc 244

                  
Query: 470 ctatatt 476
           | |||||
Sbjct: 243 ccatatt 237



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| ||||||||||| |||||||||||
Sbjct: 456 gggctcccatattcgtcctctgagtcttc 428



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||| ||||||| ||||| ||||||||||||||
Sbjct: 106 ctctaggctctcatattcttcctctgagtcttc 74



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| ||||||||||||||| || |||| | ||||||
Sbjct: 371 catattcttcttctgagtcttcctctagagttccatattc 332



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| | ||||| |||||||||||||
Sbjct: 307 ctctgggctcccatattcttcctctgagtctt 276
to top
>gb|AY174494.1| Pheidochloa gracilis DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 582

 Score =  157 bits (79), Expect = 6e-35
 Identities = 117/132 (88%)
 Strand = Plus / Minus

                                                                       
Query: 245 tctacttctttttggtattttagactaaattcttttgttcctcgatgctcaatcaaaccc 304
           |||| ||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||
Sbjct: 549 tctatttctttttggtattttagactcaattcttttgttccccgatgctcaataaaaccc 490

                                                                       
Query: 305 tcnnnnnnnaagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttct 364
           ||       || ||||||||||||||||||||| | |||||||||||||||||||| |||
Sbjct: 489 tctttttttaacatggaatcttcctctgggctcccatattcgtcctctgagtcttcctct 430

                       
Query: 365 gagtcttcctct 376
           ||||||||||||
Sbjct: 429 gagtcttcctct 418



 Score =  131 bits (66), Expect = 4e-27
 Identities = 123/142 (86%)
 Strand = Plus / Minus

                                                                       
Query: 410 gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtc 469
           ||||| |||||||| |||||||||||||| |||| ||||||||||||| ||||| |||| 
Sbjct: 372 gggctcccatattcttcttctgagtcttcctctagagttccatattcgccctctcgggtg 313

                                                                       
Query: 470 ctatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatat 529
            |||||| | |||||| | |||| ||||  ||||||||||||||||||| ||||||||||
Sbjct: 312 ttatattcgttctctgagctcccgtattgttcttctgagtctttctctagagtcctatat 253

                                 
Query: 530 tcgttctctgggttcccatatt 551
           |||| |||| || |||||||||
Sbjct: 252 tcgtcctctaggatcccatatt 231



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                      
Query: 347 tcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           |||||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 435 tcctctgagtcttcctctgagtcttcttctaaagtcccatatt 393



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                               
Query: 428 tctgagtcttcttctaaagttccatattcgtcctct 463
           |||||||||||||||||||| |||||||||| ||||
Sbjct: 420 tctgagtcttcttctaaagtcccatattcgttctct 385



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 356 tcttcttctgagtcttcctctaaagtaccatatt 389
           |||||||||||||||||||||| ||| |||||||
Sbjct: 360 tcttcttctgagtcttcctctagagttccatatt 327



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 60/71 (84%), Gaps = 3/71 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| ||   |||||| |||||||||||||| |||| | 
Sbjct: 255 tattcgtcctctaggatcccatattcag---cttctagggtttcatattcgttctctaga 199

                      
Query: 656 gtcctgtattc 666
           ||||| |||||
Sbjct: 198 gtcctatattc 188



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 503 tctgagtctttctctaaagtcctatattcgttctctg 539
           ||||||||||  |||||||||| ||||||||||||||
Sbjct: 420 tctgagtcttcttctaaagtcccatattcgttctctg 384



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| ||||||||||| |||||||||||
Sbjct: 462 gggctcccatattcgtcctctgagtcttc 434



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           ||||||||||   ||||||||||||||||||||
Sbjct: 239 tcccatattcagcttctagggtttcatattcgt 207



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| ||| ||| ||||||||||||
Sbjct: 142 ctctgggctctcatatccgttctctgagtcttc 110



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| ||||||||||||||| || |||| | ||||||
Sbjct: 365 catattcttcttctgagtcttcctctagagttccatattc 326



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 690 tcttctgagtcttccgctcgagtcctatattc 721
           ||||||||||||| | || |||||||||||||
Sbjct: 282 tcttctgagtctttctctagagtcctatattc 251



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 596 tattcgtcttctaggattccatat 619
           |||||||||||||||||| |||||
Sbjct: 192 tattcgtcttctaggatttcatat 169
to top
>gb|U94394.1|JPU94394 Joycea pallida RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 538

 Score =  155 bits (78), Expect = 2e-34
 Identities = 201/242 (83%), Gaps = 9/242 (3%)
 Strand = Plus / Minus

                                                                       
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcc 470
           |||| |||||||| |||||| ||||||| || | | |||||||||||||||||||| || 
Sbjct: 419 ggctcccatattcttcttctaagtcttcctcgagaattccatattcgtcctcttggatct 360

                                                                       
Query: 471 tatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||| | |||||||| |||||||||| || |||||||||||||||| |||||||||||
Sbjct: 359 tatattggttctctgggctcccatattcttcctctgagtctttctctagagtcctatatt 300

                                                                       
Query: 531 cgttctctgggttcccatatttgttttctgggctcccatattcgttttctagggtttcat 590
           ||| |||| || |||| |||| || |||| || |  ||||||||| |||||| |||||||
Sbjct: 299 cgtcctctaggatcccgtattcgtcttctaggatttcatattcgtcttctagagtttcat 240

                                                                       
Query: 591 attcgtattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcct 650
           ||||||      | |||||||| ||||||| |   ||||||  |||||||||||||||||
Sbjct: 239 attcgt------cctctaggatcccatattca---tcttctcgggtttcatattcgtcct 189

             
Query: 651 ct 652
           ||
Sbjct: 188 ct 187



 Score = 93.7 bits (47), Expect = 8e-16
 Identities = 59/63 (93%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           |||| ||||||||||||||||||| | |||||||||||||||||||| ||||||||||||
Sbjct: 528 aagagggaatcttcctctgggctcccatattcgtcctctgagtcttcctctgagtcttcc 469

              
Query: 374 tct 376
           |||
Sbjct: 468 tct 466



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 104/123 (84%), Gaps = 4/123 (3%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |   ||||||  ||||||||||||||| | ||||
Sbjct: 198 tattcgtcctctaggatcccatattca---tcttctcgggtttcatattcgtcttgtcgg 142

                                                                       
Query: 656 gtcctgtattccgtgttctanggtctcatattcctcttctgagtcttccgctcgagtcct 715
           ||| | |||||  | ||||| | |||||||||| ||||||||||||||| ||||||||||
Sbjct: 141 gtcttatattcatt-ttctaggctctcatattcttcttctgagtcttcctctcgagtcct 83

              
Query: 716 ata 718
           |||
Sbjct: 82  ata 80



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                      
Query: 347 tcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           |||||||||||||| ||||||||||| |||||||  |||||||
Sbjct: 483 tcctctgagtcttcctctgagtcttcttctaaagccccatatt 441



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 428 tctgagtcttcttctaaagttccatattcgtcctct 463
           |||||||||||||||||||  |||||||||| ||||
Sbjct: 468 tctgagtcttcttctaaagccccatattcgttctct 433



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                      
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           ||||||| |||||||||||||| |||  ||| | ||| || |||||| |||||||||||
Sbjct: 116 catattcttcttctgagtcttcctctcgagtcctatactcttcctctagggtcctatat 58



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                 
Query: 410 gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctct 463
           ||||| |||||||| || ||||||||||  |||| ||| | |||||||||||||
Sbjct: 345 gggctcccatattcttcctctgagtctttctctagagtcctatattcgtcctct 292



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| ||||||||||| |||||||||||
Sbjct: 510 gggctcccatattcgtcctctgagtcttc 482



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 503 tctgagtctttctctaaagtcctatattcgttctctg 539
           ||||||||||  ||||||| || ||||||||||||||
Sbjct: 468 tctgagtcttcttctaaagccccatattcgttctctg 432



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | |||| |||||||||||||||
Sbjct: 182 tcccatattcatcttctcgggtttcatattcgt 150



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 356 tcttcttctgagtcttcctct 376
           |||||||||||||||||||||
Sbjct: 111 tcttcttctgagtcttcctct 91



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 492 catattcctcttctgagtctttctctaaagtcctata 528
           ||||||| ||||||||||||| ||||  |||||||||
Sbjct: 116 catattcttcttctgagtcttcctctcgagtcctata 80



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| | ||||| |||||||||||||
Sbjct: 349 ctctgggctcccatattcttcctctgagtctt 318



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| || |||||||||| | || |||||||||||||
Sbjct: 338 catattcttcctctgagtctttctctagagtcctatattc 299
to top
>gb|AY174490.1| Panicum stoloniferum DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 548

 Score =  151 bits (76), Expect = 4e-33
 Identities = 121/136 (88%)
 Strand = Plus / Minus

                                                                       
Query: 416 ccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           |||||||| |||||||||||||| |||| ||||||||||||||||||| ||||| |||||
Sbjct: 416 ccatattcttcttctgagtcttcctctagagttccatattcgtcctctagggtcttatat 357

                                                                       
Query: 476 ttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttc 535
           | | |||||||| |||| ||||| || |||||||||||||||| |||||||||||||| |
Sbjct: 356 tcgttctctgggctcccgtattcttcctctgagtctttctctagagtcctatattcgtcc 297

                           
Query: 536 tctgggttcccatatt 551
           ||| || |||||||||
Sbjct: 296 tctaggatcccatatt 281



 Score = 93.7 bits (47), Expect = 8e-16
 Identities = 88/104 (84%)
 Strand = Plus / Minus

                                                                       
Query: 284 cctcgatgctcaatcaaaccctcnnnnnnnaagatggaatcttcctctgggctctcgtat 343
           |||||||||||||| ||||||||       ||||| ||||||||||| || ||| | |||
Sbjct: 548 cctcgatgctcaataaaaccctctttttttaagatagaatcttcctccggactcccatat 489

                                                       
Query: 344 tcgtcctctgagtcttcttctgagtcttcctctaaagtaccata 387
           ||||| ||||||||||| |||||||||||||||||||| |||||
Sbjct: 488 tcgtcttctgagtcttcctctgagtcttcctctaaagtcccata 445



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 72/85 (84%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| ||||||||||||| ||||| ||| | |||||||| |||| || ||  ||
Sbjct: 418 tcccatattcttcttctgagtcttcctctagagttccatattcgtcctctagggtcttat 359

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| ||||||||||| |||||
Sbjct: 358 attcgttctctgggctcccgtattc 334



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 50/57 (87%), Gaps = 3/57 (5%)
 Strand = Plus / Minus

                                                                    
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctct 652
           |||||||| |||||||| ||||||| |   ||||||| |||||||||||||||||||
Sbjct: 305 tattcgtcctctaggatcccatattca---tcttctagggtttcatattcgtcctct 252



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           |||||||||| || |||||||||||| |||||||||||||
Sbjct: 178 tctcatattcatcctctgagtcttcctctcgagtcctata 139



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 356 tcttcttctgagtcttcctctaaagtaccatatt 389
           |||||||||||||||||||||| ||| |||||||
Sbjct: 410 tcttcttctgagtcttcctctagagttccatatt 377



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 289 tcccatattcatcttctagggtttcatattcgt 257



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| ||||| ||||||||||||||
Sbjct: 186 ctctgggctctcatattcatcctctgagtcttc 154



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| ||||||| |||||||||||||
Sbjct: 351 ctctgggctcccgtattcttcctctgagtctt 320



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 520 agtcctatattcgttctctgggttcccatatt 551
           |||||||||||||||||||||| || ||||||
Sbjct: 201 agtcctatattcgttctctgggctctcatatt 170



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 416 ccatattcgtcttctgagtcttc 438
           |||||||||||||||||||||||
Sbjct: 494 ccatattcgtcttctgagtcttc 472



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 503 tctgagtctttctctaaagtcctatattcgttctctg 539
           |||||||||| ||||||||||| ||| || |||||||
Sbjct: 470 tctgagtcttcctctaaagtcccatawtccttctctg 434



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 489 tcccatattcctcttctgagtctttctct 517
           |||||||||| ||||||||||||| ||||
Sbjct: 496 tcccatattcgtcttctgagtcttcctct 468



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 596 tattcgtcttctaggattccatatt 620
           |||||||||||||||||| ||||||
Sbjct: 242 tattcgtcttctaggatttcatatt 218



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| ||||||||||||||| || |||| | ||||||
Sbjct: 415 catattcttcttctgagtcttcctctagagttccatattc 376



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 568 atattcgttttctagggtttcatattcg 595
           |||||||| ||||||| |||||||||||
Sbjct: 243 atattcgtcttctaggatttcatattcg 216
to top
>gb|AF372196.1| Panicum prionitis DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 574

 Score =  151 bits (76), Expect = 4e-33
 Identities = 121/136 (88%)
 Strand = Plus / Minus

                                                                       
Query: 416 ccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           |||||||| |||||||||||||| |||| ||||||||||||||||||| ||||| |||||
Sbjct: 458 ccatattcttcttctgagtcttcctctagagttccatattcgtcctctcgggtcttatat 399

                                                                       
Query: 476 ttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttc 535
           | | |||||||| |||| ||||| || |||||||||||||||| |||||||||||||| |
Sbjct: 398 tcgttctctgggctcccgtattcttcctctgagtctttctctagagtcctatattcgtcc 339

                           
Query: 536 tctgggttcccatatt 551
           ||| || |||||||||
Sbjct: 338 tctaggatcccatatt 323



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 69/76 (90%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           ||||||||||||||||| |||||| | |||||||| ||||||||||| ||||||||||| 
Sbjct: 560 aagatggaatcttcctccgggctcccatattcgtcttctgagtcttcctctgagtcttct 501

                           
Query: 374 tctaaagtaccatatt 389
           |||||||| |||||||
Sbjct: 500 tctaaagtcccatatt 485



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 72/85 (84%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| ||||||||||||| ||||| ||| | |||||||| |||| || ||  ||
Sbjct: 460 tcccatattcttcttctgagtcttcctctagagttccatattcgtcctctcgggtcttat 401

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| ||||||||||| |||||
Sbjct: 400 attcgttctctgggctcccgtattc 376



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 61/71 (85%), Gaps = 3/71 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |   ||||||| ||||||||||||||||||| | 
Sbjct: 347 tattcgtcctctaggatcccatattca---tcttctagggtttcatattcgtcctctaga 291

                      
Query: 656 gtcctgtattc 666
           ||||| |||||
Sbjct: 290 gtcctatattc 280



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           |||||||||| || |||||||||||| |||||||||||||
Sbjct: 220 tctcatattcgtcctctgagtcttcctctcgagtcctata 181



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 356 tcttcttctgagtcttcctctaaagtaccatatt 389
           |||||||||||||||||||||| ||| |||||||
Sbjct: 452 tcttcttctgagtcttcctctagagttccatatt 419



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||| | |||| ||| || ||||||| || |||||||||| |||| 
Sbjct: 250 cctctcgggtcctatattcgttctcggggctctcatattcgtcctctgagtcttcctctc 191

                     
Query: 519 aagtcctata 528
            |||||||||
Sbjct: 190 gagtcctata 181



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| |||||||||||||||||||||||
Sbjct: 542 gggctcccatattcgtcttctgagtcttc 514



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 512 tctgagtcttcttctaaagtcccatattc 484



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 331 tcccatattcatcttctagggtttcatattcgt 299



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 332 gggctctcgtattcgtcctctgagtcttc 360
           |||||||| ||||||||||||||||||||
Sbjct: 224 gggctctcatattcgtcctctgagtcttc 196



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| ||||||| |||||||||||||
Sbjct: 393 ctctgggctcccgtattcttcctctgagtctt 362



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 489 tcccatattcctcttctgagtctttctct 517
           |||||||||| ||||||||||||| ||||
Sbjct: 538 tcccatattcgtcttctgagtcttcctct 510



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| ||||||||||||||| || |||| | ||||||
Sbjct: 457 catattcttcttctgagtcttcctctagagttccatattc 418



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 424 catattcgtcctctcgggtc 405



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 320 tcttctagggtttcatattcgtcctctagagtcctatatt 281
to top
>gb|AF372161.1| Arthropogon lanceolatus DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 464

 Score =  151 bits (76), Expect = 4e-33
 Identities = 121/136 (88%)
 Strand = Plus / Minus

                                                                       
Query: 416 ccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           |||||||| |||||||||||||| |||| ||||||||||||||||||| ||||| |||||
Sbjct: 425 ccatattcttcttctgagtcttcctctagagttccatattcgtcctctcgggtcttatat 366

                                                                       
Query: 476 ttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttc 535
           | | |||||||| |||| ||||| || |||||||||||||||| |||||||||||||| |
Sbjct: 365 tcgttctctgggctcccgtattcttcctctgagtctttctctagagtcctatattcgtcc 306

                           
Query: 536 tctgggttcccatatt 551
           ||| || |||||||||
Sbjct: 305 tctaggatcccatatt 290



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 72/85 (84%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| ||||||||||||| ||||| ||| | |||||||| |||| || ||  ||
Sbjct: 427 tcccatattcttcttctgagtcttcctctagagttccatattcgtcctctcgggtcttat 368

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| ||||||||||| |||||
Sbjct: 367 attcgttctctgggctcccgtattc 343



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 61/71 (85%), Gaps = 3/71 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |   ||||||| ||||||||||||||||||| | 
Sbjct: 314 tattcgtcctctaggatcccatattca---tcttctagggtttcatattcgtcctctaga 258

                      
Query: 656 gtcctgtattc 666
           ||||| |||||
Sbjct: 257 gtcctatattc 247



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           |||||||||| || |||||||||||| |||||||||||||
Sbjct: 187 tctcatattcgtcctctgagtcttcctctcgagtcctata 148



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 356 tcttcttctgagtcttcctctaaagtaccatatt 389
           |||||||||||||||||||||| ||| |||||||
Sbjct: 419 tcttcttctgagtcttcctctagagttccatatt 386



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||| | |||| ||| || ||||||| || |||||||||| |||| 
Sbjct: 217 cctctcgggtcctatattcgttctcggggctctcatattcgtcctctgagtcttcctctc 158

                     
Query: 519 aagtcctata 528
            |||||||||
Sbjct: 157 gagtcctata 148



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 298 tcccatattcatcttctagggtttcatattcgt 266



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 332 gggctctcgtattcgtcctctgagtcttc 360
           |||||||| ||||||||||||||||||||
Sbjct: 191 gggctctcatattcgtcctctgagtcttc 163



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                       
Query: 408 cggggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttggg 467
           |||||||  |||||||||| ||||||||||| |||  ||| | ||| || |||||| |||
Sbjct: 193 cggggctctcatattcgtcctctgagtcttcctctcgagtcctatactcttcctctcggg 134

                    
Query: 468 tcctatatt 476
           |||||||||
Sbjct: 133 tcctatatt 125



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| ||||||| |||||||||||||
Sbjct: 360 ctctgggctcccgtattcttcctctgagtctt 329



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| ||||||||||||||| || |||| | ||||||
Sbjct: 424 catattcttcttctgagtcttcctctagagttccatattc 385



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 391 catattcgtcctctcgggtc 372



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 287 tcttctagggtttcatattcgtcctctagagtcctatatt 248
to top
>gb|AF372160.1| Altoparadisium chapadense DNA-directed RNA polymerase beta' subunit
           2 (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 505

 Score =  151 bits (76), Expect = 4e-33
 Identities = 121/136 (88%)
 Strand = Plus / Minus

                                                                       
Query: 416 ccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           |||||||| |||||||||||||| |||| |||||| |||||||||||| ||||| |||||
Sbjct: 410 ccatattcttcttctgagtcttcctctagagttccgtattcgtcctctcgggtcttatat 351

                                                                       
Query: 476 ttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttc 535
           | | ||||||||||||||||||| || |||||||||||||||| |||||||||||||| |
Sbjct: 350 tcgttctctgggttcccatattcttcctctgagtctttctctagagtcctatattcgtcc 291

                           
Query: 536 tctgggttcccatatt 551
           ||| || ||| |||||
Sbjct: 290 tctaggatccgatatt 275



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                       
Query: 321 aatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaag 380
           |||||||||| | |||| | ||||| || ||||||||||| ||||||||||| |||||||
Sbjct: 505 aatcttcctccgagctcccatattcatcttctgagtcttcctctgagtcttcttctaaag 446

                    
Query: 381 taccatatt 389
           | |||||||
Sbjct: 445 tcccatatt 437



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||| | |||||||| || ||||||| || |||||||||| |||| 
Sbjct: 196 cctctcgggtcctatattcgttctctgggctctcatattcgtcctctgagtcttcctctc 137

                     
Query: 519 aagtcctata 528
            |||||||||
Sbjct: 136 gagtcctata 127



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 71/85 (83%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| ||||||||||||| ||||| ||| |  ||||||| |||| || ||  ||
Sbjct: 412 tcccatattcttcttctgagtcttcctctagagttccgtattcgtcctctcgggtcttat 353

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| |||||| ||||||||||
Sbjct: 352 attcgttctctgggttcccatattc 328



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| ||||||||||||||||||||
Sbjct: 174 ctctgggctctcatattcgtcctctgagtcttc 142



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 61/71 (85%), Gaps = 1/71 (1%)
 Strand = Plus / Minus

                                                                       
Query: 648 cctctcgggtcctgtattccgtgttctanggtctcatattcctcttctgagtcttccgct 707
           ||||||||||||| |||| |||  |||  | |||||||||| || |||||||||||| ||
Sbjct: 196 cctctcgggtcctatatt-cgttctctgggctctcatattcgtcctctgagtcttcctct 138

                      
Query: 708 cgagtcctata 718
           |||||||||||
Sbjct: 137 cgagtcctata 127



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 464 tctgagtcttcttctaaagtcccatattc 436



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 626 tcttctanggtttcatattcgtcctctc 653
           ||||||| ||||||||||||||||||||
Sbjct: 272 tcttctagggtttcatattcgtcctctc 245



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 521 gtcctatattcgttctctgggttcccatatt 551
           ||||||||||||||||||||| || ||||||
Sbjct: 188 gtcctatattcgttctctgggctctcatatt 158



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 356 tcttcttctgagtcttcctcta 377
           ||||||||||||||||||||||
Sbjct: 404 tcttcttctgagtcttcctcta 383



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 67/81 (82%), Gaps = 1/81 (1%)
 Strand = Plus / Minus

                                                                       
Query: 641 tattcgtcctctcgggtcctgtattccgtgttctanggtctcatattcctcttctgagtc 700
           |||||||||||||||||| | ||||| ||  |||  | || ||||||| || ||||||||
Sbjct: 374 tattcgtcctctcgggtcttatattc-gttctctgggttcccatattcttcctctgagtc 316

                                
Query: 701 ttccgctcgagtcctatattc 721
           || | || |||||||||||||
Sbjct: 315 tttctctagagtcctatattc 295



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 489 tcccatattcctcttctgagtctttctct 517
           |||||||||| ||||||||||||| ||||
Sbjct: 490 tcccatattcatcttctgagtcttcctct 462



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 568 atattcgttttctagggtttcatattcgt 596
           |||||| | ||||||||||||||||||||
Sbjct: 279 atattcatcttctagggtttcatattcgt 251



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 596 tattcgtcttctaggattccatatt 620
           |||||||||||||||||| ||||||
Sbjct: 230 tattcgtcttctaggatttcatatt 206



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 568 atattcgttttctagggtttcatattcg 595
           |||||||| ||||||| |||||||||||
Sbjct: 231 atattcgtcttctaggatttcatattcg 204



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                       
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||||| ||||||||||| |||  ||| | ||| || |||||| |||||| |||||
Sbjct: 163 catattcgtcctctgagtcttcctctcgagtcctatactcttcctctcgggtccgatatt 104
to top
>gb|U96312.1|RPU96312 Rytidosperma pumila RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 513

 Score =  151 bits (76), Expect = 4e-33
 Identities = 205/248 (82%), Gaps = 9/248 (3%)
 Strand = Plus / Minus

                                                                       
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcc 470
           |||| |||||||| |||||| ||||||| || | | |||||||||||||||||||| || 
Sbjct: 398 ggctcccatattcttcttctaagtcttcctcgagaattccatattcgtcctcttggatct 339

                                                                       
Query: 471 tatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||| | |||||||| |||||||||| |  |||||||||||||||| |||||||||||
Sbjct: 338 tatattggttctctgggctcccatattctttctctgagtctttctctagagtcctatatt 279

                                                                       
Query: 531 cgttctctgggttcccatatttgttttctgggctcccatattcgttttctagggtttcat 590
           ||| |||| || |||| |||| || |||| || |  ||||||||| |||||| |||||| 
Sbjct: 278 cgtcctctaggatcccgtattcgtcttctaggatttcatattcgtcttctagagtttca- 220

                                                                       
Query: 591 attcgtattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcct 650
                |||||||| |||||||| ||||||| |   ||||||  ||||||||||||||| |
Sbjct: 219 -----tattcgtcctctaggatcccatattca---tcttctcgggtttcatattcgtctt 168

                   
Query: 651 ctcgggtc 658
           ||||||||
Sbjct: 167 ctcgggtc 160



 Score = 93.7 bits (47), Expect = 8e-16
 Identities = 59/63 (93%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           |||| ||||||||||||||||||| | |||||||||||||||||||| ||||||||||||
Sbjct: 507 aagagggaatcttcctctgggctcccatattcgtcctctgagtcttcctctgagtcttcc 448

              
Query: 374 tct 376
           |||
Sbjct: 447 tct 445



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 72/81 (88%), Gaps = 1/81 (1%)
 Strand = Plus / Minus

                                                                       
Query: 638 tcatattcgtcctctcgggtcctgtattccgtgttctanggtctcatattcctcttctga 697
           |||||||| |||||||||||| | ||||| || ||||| | |||||||||| ||||||||
Sbjct: 138 tcatattcttcctctcgggtcttatattc-gtcttctaggctctcatattcttcttctga 80

                                
Query: 698 gtcttccgctcgagtcctata 718
           ||||||| |||||||||||||
Sbjct: 79  gtcttcctctcgagtcctata 59



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                      
Query: 347 tcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           |||||||||||||| ||||||||||| |||||||  |||||||
Sbjct: 462 tcctctgagtcttcctctgagtcttcttctaaagccccatatt 420



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 428 tctgagtcttcttctaaagttccatattcgtcctct 463
           |||||||||||||||||||  |||||||||| ||||
Sbjct: 447 tctgagtcttcttctaaagccccatattcgttctct 412



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 65/79 (82%)
 Strand = Plus / Minus

                                                                       
Query: 450 catattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgagt 509
           ||||||| |||||| ||||| |||||| |   ||| || || ||||||| ||||||||||
Sbjct: 137 catattcttcctctcgggtcttatattcgtcttctaggctctcatattcttcttctgagt 78

                              
Query: 510 ctttctctaaagtcctata 528
           ||| ||||  |||||||||
Sbjct: 77  cttcctctcgagtcctata 59



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                      
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           ||||||| |||||||||||||| |||  ||| | ||| || |||||| |||||||||||
Sbjct: 95  catattcttcttctgagtcttcctctcgagtcctatactcttcctctagggtcctatat 37



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| ||||||||||| |||||||||||
Sbjct: 489 gggctcccatattcgtcctctgagtcttc 461



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 503 tctgagtctttctctaaagtcctatattcgttctctg 539
           ||||||||||  ||||||| || ||||||||||||||
Sbjct: 447 tctgagtcttcttctaaagccccatattcgttctctg 411



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 356 tcttcttctgagtcttcctct 376
           |||||||||||||||||||||
Sbjct: 90  tcttcttctgagtcttcctct 70
to top
>gb|AY174478.1| Eriachne mucronata DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 606

 Score =  149 bits (75), Expect = 1e-32
 Identities = 116/132 (87%)
 Strand = Plus / Minus

                                                                       
Query: 245 tctacttctttttggtattttagactaaattcttttgttcctcgatgctcaatcaaaccc 304
           |||| ||||||||||||||||||||| ||||||||| |||| ||||||||||| ||||||
Sbjct: 572 tctatttctttttggtattttagactcaattcttttcttccccgatgctcaataaaaccc 513

                                                                       
Query: 305 tcnnnnnnnaagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttct 364
           ||       || ||||||||||||||||||||| | |||||||||||||||||||| |||
Sbjct: 512 tctttttttaacatggaatcttcctctgggctcccatattcgtcctctgagtcttcctct 453

                       
Query: 365 gagtcttcctct 376
           ||||||||||||
Sbjct: 452 gagtcttcctct 441



 Score =  123 bits (62), Expect = 9e-25
 Identities = 117/136 (86%)
 Strand = Plus / Minus

                                                                       
Query: 416 ccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           |||||||| |||||||||||||| |||| ||||||||||| ||||||| ||||  || ||
Sbjct: 389 ccatattcttcttctgagtcttcctctagagttccatattygtcctctcgggtgttacat 330

                                                                       
Query: 476 ttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttc 535
           | | |||||| | |||| ||||  ||||||||||||||||||| |||||||||||||| |
Sbjct: 329 tcgttctctgagctcccgtattgttcttctgagtctttctctagagtcctatattcgtcc 270

                           
Query: 536 tctgggttcccatatt 551
           ||| || |||||||||
Sbjct: 269 tctaggatcccatatt 254



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                      
Query: 347 tcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           |||||||||||||| |||||| |||| |||||||| |||||||
Sbjct: 458 tcctctgagtcttcctctgagacttcttctaaagtcccatatt 416



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 356 tcttcttctgagtcttcctctaaagtaccatatttttcctc 396
           |||||||||||||||||||||| ||| |||||||  |||||
Sbjct: 383 tcttcttctgagtcttcctctagagttccatattygtcctc 343



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 428 tctgagtcttcttctaaagttccatattcgtcctct 463
           |||||| ||||||||||||| |||||||||| ||||
Sbjct: 443 tctgagacttcttctaaagtcccatattcgttctct 408



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctct 538
           |||||||||| ||||||||||||| ||||| ||| | ||||| || ||||
Sbjct: 391 tcccatattcttcttctgagtcttcctctagagttccatattygtcctct 342



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 49/57 (85%), Gaps = 3/57 (5%)
 Strand = Plus / Minus

                                                                    
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctct 652
           |||||||| |||||||| ||||||| ||   |||||| |||||||||||||| ||||
Sbjct: 278 tattcgtcctctaggatcccatattcag---cttctaaggtttcatattcgttctct 225



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| ||||||||||| |||||||||||
Sbjct: 485 gggctcccatattcgtcctctgagtcttc 457



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 515 tctaaagtcctatattcgttctctg 539
           |||||||||| ||||||||||||||
Sbjct: 431 tctaaagtcccatattcgttctctg 407



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| ||| ||| ||||||||||||
Sbjct: 165 ctctgggctctcatatccgttctctgagtcttc 133



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 690 tcttctgagtcttccgctcgagtcctatattc 721
           ||||||||||||| | || |||||||||||||
Sbjct: 305 tcttctgagtctttctctagagtcctatattc 274
to top
>gb|AF372205.1| Steinchisma hians DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 487

 Score =  149 bits (75), Expect = 1e-32
 Identities = 116/132 (87%)
 Strand = Plus / Minus

                                                                       
Query: 258 ggtattttagactaaattcttttgttcctcgatgctcaatcaaaccctcnnnnnnnaaga 317
           |||||||||||||||||||||||||||||||||||||||| ||||||||       ||||
Sbjct: 487 ggtattttagactaaattcttttgttcctcgatgctcaataaaaccctctttttttaaga 428

                                                                       
Query: 318 tggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctcta 377
           | ||||||||||| |||||| | |||||||| ||||||||||| ||||||||||| ||||
Sbjct: 427 tagaatcttcctccgggctcccatattcgtcttctgagtcttcctctgagtcttcttcta 368

                       
Query: 378 aagtaccatatt 389
           |||| |||||||
Sbjct: 367 aagtcccatatt 356



 Score =  145 bits (73), Expect = 2e-31
 Identities = 118/133 (88%)
 Strand = Plus / Minus

                                                                       
Query: 419 tattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatttg 478
           |||||||||||||||||||| |||| ||||||||||||||||||| ||||| |||||| |
Sbjct: 332 tattcgtcttctgagtcttcctctagagttccatattcgtcctctcgggtcttatattcg 273

                                                                       
Query: 479 ctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttctct 538
            |||||||| |||||||||| || | |||||||||||||| |||||||||||||  ||||
Sbjct: 272 ttctctgggctcccatattcttcctttgagtctttctctagagtcctatattcgccctct 213

                        
Query: 539 gggttcccatatt 551
            || |||||||||
Sbjct: 212 aggatcccatatt 200



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                       
Query: 494 tattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccatatttg 553
           ||||| ||||||||||||| ||||| ||| | |||||||| |||| || ||  ||||| |
Sbjct: 332 tattcgtcttctgagtcttcctctagagttccatattcgtcctctcgggtcttatattcg 273

                               
Query: 554 ttttctgggctcccatattc 573
           || |||||||||||||||||
Sbjct: 272 ttctctgggctcccatattc 253



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| |||||||||||||||||||||||
Sbjct: 413 gggctcccatattcgtcttctgagtcttc 385



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 383 tctgagtcttcttctaaagtcccatattc 355



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 208 tcccatattcatcttctagggtttcatattcgt 176



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 671 ttctanggtctcatattcctcttctgagtcttccgctcgagtcctata 718
           ||||| ||| |||||||| |  |||||||||||| |||||||||||||
Sbjct: 195 ttctagggtttcatattcgtgctctgagtcttcctctcgagtcctata 148



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 359 tcttctgagtcttcctctaaagtaccatatt 389
           ||||||||||||||||||| ||| |||||||
Sbjct: 326 tcttctgagtcttcctctagagttccatatt 296



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 489 tcccatattcctcttctgagtctttctct 517
           |||||||||| ||||||||||||| ||||
Sbjct: 409 tcccatattcgtcttctgagtcttcctct 381



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 301 catattcgtcctctcgggtc 282



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                      
Query: 626 tcttctanggtttcatattcgtcctct 652
           ||||||| |||||||||||||| ||||
Sbjct: 197 tcttctagggtttcatattcgtgctct 171
to top
>gb|U96315.1|TMU96315 Thysanolaena maxima RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 477

 Score =  147 bits (74), Expect = 6e-32
 Identities = 125/142 (88%)
 Strand = Plus / Minus

                                                                       
Query: 410 gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtc 469
           ||||| |||||||| |||||||||||||| |||| |||||| |||||||||||| |||||
Sbjct: 374 gggctcccatattcttcttctgagtcttcctctagagttccgtattcgtcctctcgggtc 315

                                                                       
Query: 470 ctatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatat 529
            |||||| | |||||||| |||||||||| || || ||||||||||||| ||||||||||
Sbjct: 314 ttatattcgttctctgggctcccatattcttcctccgagtctttctctagagtcctatat 255

                                 
Query: 530 tcgttctctgggttcccatatt 551
           |||| |||| || |||||||||
Sbjct: 254 tcgtcctctaggatcccatatt 233



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 79/92 (85%)
 Strand = Plus / Minus

                                                                       
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatttgctctctgggttcccatat 496
           |||||||  ||| |||||||| ||||| |||||||||||||| |||||||| || |||||
Sbjct: 188 tcttctagggtttcatattcgccctctcgggtcctatatttgttctctgggctctcatat 129

                                           
Query: 497 tcctcttctgagtctttctctaaagtcctata 528
           || || |||||||||| ||||  |||||||||
Sbjct: 128 tcgtcctctgagtcttcctctcgagtcctata 97



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 82/95 (86%), Gaps = 5/95 (5%)
 Strand = Plus / Minus

                                                                       
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctangg--tctca 683
           ||||||| ||||||||||||| ||||||||||||| ||||   ||||||  ||  |||||
Sbjct: 188 tcttctagggtttcatattcgccctctcgggtcctatatt---tgttctctgggctctca 132

                                              
Query: 684 tattcctcttctgagtcttccgctcgagtcctata 718
           ||||| || |||||||||||| |||||||||||||
Sbjct: 131 tattcgtcctctgagtcttcctctcgagtcctata 97



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                       
Query: 325 ttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtacc 384
           |||||||||| || | |||||||| ||||||||||| ||||||||||| |||||||| ||
Sbjct: 459 ttcctctgggttcccatattcgtcttctgagtcttcctctgagtcttcttctaaagtccc 400

                
Query: 385 atatt 389
           |||||
Sbjct: 399 atatt 395



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 72/85 (84%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| ||||||||||||| ||||| ||| |  ||||||| |||| || ||  ||
Sbjct: 370 tcccatattcttcttctgagtcttcctctagagttccgtattcgtcctctcgggtcttat 311

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| |||||||||||||||||
Sbjct: 310 attcgttctctgggctcccatattc 286



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                
Query: 481 ctctgggttcccatattcctcttctgagtctttctct 517
           |||||||||||||||||| ||||||||||||| ||||
Sbjct: 456 ctctgggttcccatattcgtcttctgagtcttcctct 420



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| ||||||||||||||||||||
Sbjct: 144 ctctgggctctcatattcgtcctctgagtcttc 112



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                               
Query: 428 tctgagtcttcttctaaagttccatattcgtcctct 463
           |||||||||||||||||||| |||||||||| ||||
Sbjct: 422 tctgagtcttcttctaaagtcccatattcgttctct 387



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 503 tctgagtctttctctaaagtcctatattcgttctctg 539
           ||||||||||  |||||||||| ||||||||||||||
Sbjct: 422 tctgagtcttcttctaaagtcccatattcgttctctg 386



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 77/93 (82%), Gaps = 4/93 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |   |||| || |||||||||||| |||||| | 
Sbjct: 257 tattcgtcctctaggatcccatattca---tcttttagggtttcatattcatcctctaga 201

                                            
Query: 656 gtcctgtattccgtgttctanggtctcatattc 688
           ||||| |||| ||| ||||| ||| ||||||||
Sbjct: 200 gtcctatatt-cgtcttctagggtttcatattc 169



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 568 atattcgttttctagggtttcatattcg 595
           |||||||| |||||||||||||||||||
Sbjct: 195 atattcgtcttctagggtttcatattcg 168



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 416 ccatattcgtcttctgagtcttc 438
           |||||||||||||||||||||||
Sbjct: 446 ccatattcgtcttctgagtcttc 424



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 356 tcttcttctgagtcttcctcta 377
           ||||||||||||||||||||||
Sbjct: 362 tcttcttctgagtcttcctcta 341



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                       
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||||| ||||||||||| |||  ||| | ||| || |||||| |||||| |||||
Sbjct: 133 catattcgtcctctgagtcttcctctcgagtcctatactcttcctctcgggtccgatatt 74
to top
>gb|AF355984.1| Merxmuellera decora RNA polymerase beta-subunit (rpoC2) gene,
           partial cds; chloroplast gene for chloroplast product
          Length = 465

 Score =  145 bits (73), Expect = 2e-31
 Identities = 124/141 (87%)
 Strand = Plus / Minus

                                                                       
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcc 470
           |||| |||||||| |||||| ||||||| |||| | ||||||||||||||||| ||||| 
Sbjct: 351 ggctcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggtct 292

                                                                       
Query: 471 tatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||| | |||||||| |||||||||| || |||||||||||||||| |||||||||||
Sbjct: 291 tatattcgttctctgggctcccatattcttcctctgagtctttctctagagtcctatatt 232

                                
Query: 531 cgttctctgggttcccatatt 551
           ||| |||| || |||||||||
Sbjct: 231 cgtcctctaggatcccatatt 211



 Score =  101 bits (51), Expect = 3e-18
 Identities = 83/93 (89%), Gaps = 1/93 (1%)
 Strand = Plus / Minus

                                                                       
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
           ||||||| ||||||||||||||||||||||||||| |||| |||  |||| | |||||||
Sbjct: 166 tcttctagggtttcatattcgtcctctcgggtcctatatt-cgttctctaggctctcata 108

                                            
Query: 686 ttcctcttctgagtcttccgctcgagtcctata 718
           ||| || |||||||||||| |||||||||||||
Sbjct: 107 ttcttcctctgagtcttcctctcgagtcctata 75



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 68/74 (91%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           ||||| |||||||||||||||||| | |||||||||||||||||||| ||||||||||| 
Sbjct: 448 aagatagaatcttcctctgggctcccatattcgtcctctgagtcttcctctgagtcttct 389

                         
Query: 374 tctaaagtaccata 387
           |||||||| |||||
Sbjct: 388 tctaaagtcccata 375



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 78/92 (84%)
 Strand = Plus / Minus

                                                                       
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatttgctctctgggttcccatat 496
           |||||||  ||| |||||||||||||| |||||||||||| | ||||| || || |||||
Sbjct: 166 tcttctagggtttcatattcgtcctctcgggtcctatattcgttctctaggctctcatat 107

                                           
Query: 497 tcctcttctgagtctttctctaaagtcctata 528
           || || |||||||||| ||||  |||||||||
Sbjct: 106 tcttcctctgagtcttcctctcgagtcctata 75



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 71/85 (83%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| |||||| |||||| ||||| | | | |||||||| |||| || ||  ||
Sbjct: 348 tcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggtcttat 289

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| |||||||||||||||||
Sbjct: 288 attcgttctctgggctcccatattc 264



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||||| ||||||||||||||||||||
Sbjct: 219 tcccatattcgtcttctagggtttcatattcgt 187



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 55/63 (87%), Gaps = 1/63 (1%)
 Strand = Plus / Minus

                                                                       
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
           ||||||| ||||||||||||||||||| | ||||| |||| ||| ||||| ||| |||||
Sbjct: 208 tcttctagggtttcatattcgtcctctagagtcctatatt-cgtcttctagggtttcata 150

              
Query: 686 ttc 688
           |||
Sbjct: 149 ttc 147



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 568 atattcgttttctagggtttcatattcgt 596
           |||||||| ||||||||||||||||||||
Sbjct: 173 atattcgtcttctagggtttcatattcgt 145



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 428 tctgagtcttcttctaaagttccatattcgtcctct 463
           |||||||||||||||||||| ||||| |||| ||||
Sbjct: 400 tctgagtcttcttctaaagtcccatactcgttctct 365



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 69/83 (83%), Gaps = 1/83 (1%)
 Strand = Plus / Minus

                                                                       
Query: 639 catattcgtcctctcgggtcctgtattccgtgttctanggtctcatattcctcttctgag 698
           |||||||||||||||||||| | |||| |||  |||  | || ||||||| || ||||||
Sbjct: 312 catattcgtcctctcgggtcttatatt-cgttctctgggctcccatattcttcctctgag 254

                                  
Query: 699 tcttccgctcgagtcctatattc 721
           |||| | || |||||||||||||
Sbjct: 253 tctttctctagagtcctatattc 231



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 56/67 (83%)
 Strand = Plus / Minus

                                                                       
Query: 410 gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtc 469
           ||||| |||||||| || ||||||||||  |||| ||| | ||||||||||||| || ||
Sbjct: 277 gggctcccatattcttcctctgagtctttctctagagtcctatattcgtcctctaggatc 218

                  
Query: 470 ctatatt 476
           | |||||
Sbjct: 217 ccatatt 211



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| ||||||||||| |||||||||||
Sbjct: 430 gggctcccatattcgtcctctgagtcttc 402



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||| ||||||| ||||| ||||||||||||||
Sbjct: 122 ctctaggctctcatattcttcctctgagtcttc 90



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| | ||||| |||||||||||||
Sbjct: 281 ctctgggctcccatattcttcctctgagtctt 250



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 208 tcttctagggtttcatattcgtcctctagagtcctatatt 169
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>gb|AF355983.1| Merxmuellera lupulina RNA polymerase beta-subunit (rpoC2) gene,
           partial cds; chloroplast gene for chloroplast product
          Length = 510

 Score =  145 bits (73), Expect = 2e-31
 Identities = 124/141 (87%)
 Strand = Plus / Minus

                                                                       
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcc 470
           |||| |||||||| |||||| ||||||| |||| | ||||||||||||||||| ||||| 
Sbjct: 408 ggctcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggtct 349

                                                                       
Query: 471 tatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||| | |||||||| |||||||||| || |||||||||||||||| |||||||||||
Sbjct: 348 tatattcgttctctgggctcccatattcttcctctgagtctttctctagagtcctatatt 289

                                
Query: 531 cgttctctgggttcccatatt 551
           ||| |||| || |||||||||
Sbjct: 288 cgtcctctaggatcccatatt 268



 Score =  101 bits (51), Expect = 3e-18
 Identities = 83/93 (89%), Gaps = 1/93 (1%)
 Strand = Plus / Minus

                                                                       
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
           ||||||| ||||||||||||||||||||||||||| |||| |||  |||| | |||||||
Sbjct: 181 tcttctagggtttcatattcgtcctctcgggtcctatatt-cgttctctaggctctcata 123

                                            
Query: 686 ttcctcttctgagtcttccgctcgagtcctata 718
           ||| || |||||||||||| |||||||||||||
Sbjct: 122 ttcttcctctgagtcttcctctcgagtcctata 90



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 68/74 (91%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           ||||| |||||||||||||||||| | |||||||||||||||||||| ||||||||||| 
Sbjct: 505 aagatagaatcttcctctgggctcccatattcgtcctctgagtcttcctctgagtcttct 446

                         
Query: 374 tctaaagtaccata 387
           |||||||| |||||
Sbjct: 445 tctaaagtcccata 432



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 78/92 (84%)
 Strand = Plus / Minus

                                                                       
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatttgctctctgggttcccatat 496
           |||||||  ||| |||||||||||||| |||||||||||| | ||||| || || |||||
Sbjct: 181 tcttctagggtttcatattcgtcctctcgggtcctatattcgttctctaggctctcatat 122

                                           
Query: 497 tcctcttctgagtctttctctaaagtcctata 528
           || || |||||||||| ||||  |||||||||
Sbjct: 121 tcttcctctgagtcttcctctcgagtcctata 90



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 103/125 (82%), Gaps = 10/125 (8%)
 Strand = Plus / Minus

                                                                       
Query: 564 tcccatattcgttttctagggtttcatattcgtattcgtcttctaggattccatatttag 623
           |||||||||||| |||||||||||||      |||||||| |||||||| ||||||| | 
Sbjct: 276 tcccatattcgtcttctagggtttca------tattcgtcctctaggatcccatattca- 224

                                                                       
Query: 624 attcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctca 683
             ||||||  ||||||||||||||||||| | ||||| |||| ||| ||||| ||| |||
Sbjct: 223 --tcttctcgggtttcatattcgtcctctagagtcctatatt-cgtcttctagggtttca 167

                
Query: 684 tattc 688
           |||||
Sbjct: 166 tattc 162



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 71/85 (83%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| |||||| |||||| ||||| | | | |||||||| |||| || ||  ||
Sbjct: 405 tcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggtcttat 346

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| |||||||||||||||||
Sbjct: 345 attcgttctctgggctcccatattc 321



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 568 atattcgttttctagggtttcatattcgt 596
           |||||||| ||||||||||||||||||||
Sbjct: 188 atattcgtcttctagggtttcatattcgt 160



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 428 tctgagtcttcttctaaagttccatattcgtcctct 463
           |||||||||||||||||||| ||||| |||| ||||
Sbjct: 457 tctgagtcttcttctaaagtcccatactcgttctct 422



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 69/83 (83%), Gaps = 1/83 (1%)
 Strand = Plus / Minus

                                                                       
Query: 639 catattcgtcctctcgggtcctgtattccgtgttctanggtctcatattcctcttctgag 698
           |||||||||||||||||||| | |||| |||  |||  | || ||||||| || ||||||
Sbjct: 369 catattcgtcctctcgggtcttatatt-cgttctctgggctcccatattcttcctctgag 311

                                  
Query: 699 tcttccgctcgagtcctatattc 721
           |||| | || |||||||||||||
Sbjct: 310 tctttctctagagtcctatattc 288



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 56/67 (83%)
 Strand = Plus / Minus

                                                                       
Query: 410 gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtc 469
           ||||| |||||||| || ||||||||||  |||| ||| | ||||||||||||| || ||
Sbjct: 334 gggctcccatattcttcctctgagtctttctctagagtcctatattcgtcctctaggatc 275

                  
Query: 470 ctatatt 476
           | |||||
Sbjct: 274 ccatatt 268



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| ||||||||||| |||||||||||
Sbjct: 487 gggctcccatattcgtcctctgagtcttc 459



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||| ||||||| ||||| ||||||||||||||
Sbjct: 137 ctctaggctctcatattcttcctctgagtcttc 105



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| | ||||| |||||||||||||
Sbjct: 338 ctctgggctcccatattcttcctctgagtctt 307
to top
>gb|AF372184.1| Panicum laxum DNA-directed RNA polymerase beta' subunit 2 (rpoC2)
           gene, partial cds; chloroplast gene for chloroplast
           product
          Length = 458

 Score =  145 bits (73), Expect = 2e-31
 Identities = 118/133 (88%)
 Strand = Plus / Minus

                                                                       
Query: 419 tattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatttg 478
           |||||||||||||||||||| |||| ||||||||||||||||||| ||||| |||||| |
Sbjct: 332 tattcgtcttctgagtcttcctctagagttccatattcgtcctctcgggtcttatattcg 273

                                                                       
Query: 479 ctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttctct 538
            |||||||| |||||||||| || | |||||||||||||| |||||||||||||  ||||
Sbjct: 272 ttctctgggctcccatattcttcctttgagtctttctctagagtcctatattcgccctct 213

                        
Query: 539 gggttcccatatt 551
            || |||||||||
Sbjct: 212 aggatcccatatt 200



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 87/103 (84%)
 Strand = Plus / Minus

                                                                       
Query: 287 cgatgctcaatcaaaccctcnnnnnnnaagatggaatcttcctctgggctctcgtattcg 346
           ||||||||||| ||||||||       ||||| ||||||||||| |||||| | ||||||
Sbjct: 458 cgatgctcaataaaaccctctttttttaagatagaatcttcctccgggctcccatattcg 399

                                                      
Query: 347 tcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           || ||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 398 tcttctgagtcttcctctgagtcttcttctaaagtcccatatt 356



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                       
Query: 494 tattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccatatttg 553
           ||||| ||||||||||||| ||||| ||| | |||||||| |||| || ||  ||||| |
Sbjct: 332 tattcgtcttctgagtcttcctctagagttccatattcgtcctctcgggtcttatattcg 273

                               
Query: 554 ttttctgggctcccatattc 573
           || |||||||||||||||||
Sbjct: 272 ttctctgggctcccatattc 253



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| |||||||||||||||||||||||
Sbjct: 413 gggctcccatattcgtcttctgagtcttc 385



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 383 tctgagtcttcttctaaagtcccatattc 355



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 208 tcccatattcatcttctagggtttcatattcgt 176



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 671 ttctanggtctcatattcctcttctgagtcttccgctcgagtcctata 718
           ||||| ||| |||||||| |  |||||||||||| |||||||||||||
Sbjct: 195 ttctagggtttcatattcgtgctctgagtcttcctctcgagtcctata 148



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 359 tcttctgagtcttcctctaaagtaccatatt 389
           ||||||||||||||||||| ||| |||||||
Sbjct: 326 tcttctgagtcttcctctagagttccatatt 296



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 489 tcccatattcctcttctgagtctttctct 517
           |||||||||| ||||||||||||| ||||
Sbjct: 409 tcccatattcgtcttctgagtcttcctct 381



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 301 catattcgtcctctcgggtc 282



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                      
Query: 626 tcttctanggtttcatattcgtcctct 652
           ||||||| |||||||||||||| ||||
Sbjct: 197 tcttctagggtttcatattcgtgctct 171
to top
>gb|AF372183.1| Plagiantha tenella DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 458

 Score =  145 bits (73), Expect = 2e-31
 Identities = 118/133 (88%)
 Strand = Plus / Minus

                                                                       
Query: 419 tattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatttg 478
           |||||||||||||||||||| |||| ||||||||||||||||||| ||||| |||||| |
Sbjct: 332 tattcgtcttctgagtcttcctctagagttccatattcgtcctctcgggtcttatattcg 273

                                                                       
Query: 479 ctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttctct 538
            |||||||| |||||||||| || | |||||||||||||| |||||||||||||  ||||
Sbjct: 272 ttctctgggctcccatattcttcctttgagtctttctctagagtcctatattcgccctct 213

                        
Query: 539 gggttcccatatt 551
            || |||||||||
Sbjct: 212 aggatcccatatt 200



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 87/103 (84%)
 Strand = Plus / Minus

                                                                       
Query: 287 cgatgctcaatcaaaccctcnnnnnnnaagatggaatcttcctctgggctctcgtattcg 346
           ||||||||||| ||||||||       ||||| ||||||||||| |||||| | ||||||
Sbjct: 458 cgatgctcaataaaaccctctttttttaagatagaatcttcctccgggctcccatattcg 399

                                                      
Query: 347 tcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           || ||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 398 tcttctgagtcttcctctgagtcttcttctaaagtcccatatt 356



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                       
Query: 494 tattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccatatttg 553
           ||||| ||||||||||||| ||||| ||| | |||||||| |||| || ||  ||||| |
Sbjct: 332 tattcgtcttctgagtcttcctctagagttccatattcgtcctctcgggtcttatattcg 273

                               
Query: 554 ttttctgggctcccatattc 573
           || |||||||||||||||||
Sbjct: 272 ttctctgggctcccatattc 253



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 671 ttctanggtctcatattcctcttctgagtcttccgctcgagtcctata 718
           ||||| ||| |||||||| || |||||||||||| |||||||||||||
Sbjct: 195 ttctagggtttcatattcgtcctctgagtcttcctctcgagtcctata 148



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| |||||||||||||||||||||||
Sbjct: 413 gggctcccatattcgtcttctgagtcttc 385



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 383 tctgagtcttcttctaaagtcccatattc 355



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 208 tcccatattcatcttctagggtttcatattcgt 176



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 626 tcttctanggtttcatattcgtcctct 652
           ||||||| |||||||||||||||||||
Sbjct: 197 tcttctagggtttcatattcgtcctct 171



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 359 tcttctgagtcttcctctaaagtaccatatt 389
           ||||||||||||||||||| ||| |||||||
Sbjct: 326 tcttctgagtcttcctctagagttccatatt 296



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 489 tcccatattcctcttctgagtctttctct 517
           |||||||||| ||||||||||||| ||||
Sbjct: 409 tcccatattcgtcttctgagtcttcctct 381



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 301 catattcgtcctctcgggtc 282



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 341 tattcgtcctctgagtcttc 360
           ||||||||||||||||||||
Sbjct: 182 tattcgtcctctgagtcttc 163



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                       
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||||| ||||||||||| |||  ||| | ||| || |||||| |||||| |||||
Sbjct: 184 catattcgtcctctgagtcttcctctcgagtcctatactcttcctctcgggtccgatatt 125
to top
>gb|U95079.1|MSU95079 Merxmuellera setacea RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 481

 Score =  145 bits (73), Expect = 2e-31
 Identities = 124/141 (87%)
 Strand = Plus / Minus

                                                                       
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcc 470
           |||| |||||||| |||||| ||||||| |||| | ||||||||||||||||| ||||| 
Sbjct: 377 ggctcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggtct 318

                                                                       
Query: 471 tatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||| | |||||||| |||||||||| || |||||||||||||||  |||||||||||
Sbjct: 317 tatattcgttctctgggctcccatattcttcctctgagtctttctctcgagtcctatatt 258

                                
Query: 531 cgttctctgggttcccatatt 551
           |||||||| || |||||||||
Sbjct: 257 cgttctctaggatcccatatt 237



 Score =  103 bits (52), Expect = 8e-19
 Identities = 70/76 (92%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           ||||| |||||||||||||||||| | |||||||||||||||||||| ||||||||||| 
Sbjct: 474 aagatagaatcttcctctgggctcccatattcgtcctctgagtcttcctctgagtcttct 415

                           
Query: 374 tctaaagtaccatatt 389
           |||||||| |||||||
Sbjct: 414 tctaaagtcccatatt 399



 Score =  101 bits (51), Expect = 3e-18
 Identities = 83/93 (89%), Gaps = 1/93 (1%)
 Strand = Plus / Minus

                                                                       
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
           ||||||| ||||||||||||||||||||||||||| |||| |||  |||| | |||||||
Sbjct: 150 tcttctagggtttcatattcgtcctctcgggtcctatatt-cgttctctaggctctcata 92

                                            
Query: 686 ttcctcttctgagtcttccgctcgagtcctata 718
           ||| || |||||||||||| |||||||||||||
Sbjct: 91  ttcttcctctgagtcttcctctcgagtcctata 59



 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 117/142 (82%), Gaps = 10/142 (7%)
 Strand = Plus / Minus

                                                                       
Query: 547 atatttgttttctgggctcccatattcgttttctagggtttcatattcgtattcgtcttc 606
           ||||| ||| ||| || |||||||||||| ||||||||||||||||||||      | ||
Sbjct: 262 atattcgttctctaggatcccatattcgtcttctagggtttcatattcgt------cctc 209

                                                                       
Query: 607 taggattccatatttagattcttctanggtttcatattcgtcctctcgggtcctgtattc 666
           |||||| ||||||| |   ||||||  ||||||||||||||||||| ||||||| |||| 
Sbjct: 208 taggatcccatattca---tcttctcgggtttcatattcgtcctcttgggtcctatatt- 153

                                 
Query: 667 cgtgttctanggtctcatattc 688
           ||| ||||| ||| ||||||||
Sbjct: 152 cgtcttctagggtttcatattc 131



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 95/114 (83%)
 Strand = Plus / Minus

                                                                       
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatttgctctctgggttcccatat 496
           |||||||  ||| |||||||||||||| |||||||||||| | ||||| || || |||||
Sbjct: 150 tcttctagggtttcatattcgtcctctcgggtcctatattcgttctctaggctctcatat 91

                                                                 
Query: 497 tcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccatat 550
           || || |||||||||| ||||  ||||||||| || | |||| || ||||||||
Sbjct: 90  tcttcctctgagtcttcctctcgagtcctatactcttcctctagggtcccatat 37



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 71/85 (83%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| |||||| |||||| ||||| | | | |||||||| |||| || ||  ||
Sbjct: 374 tcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggtcttat 315

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| |||||||||||||||||
Sbjct: 314 attcgttctctgggctcccatattc 290



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                               
Query: 428 tctgagtcttcttctaaagttccatattcgtcctct 463
           |||||||||||||||||||| |||||||||| ||||
Sbjct: 426 tctgagtcttcttctaaagtcccatattcgttctct 391



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 70/83 (84%), Gaps = 1/83 (1%)
 Strand = Plus / Minus

                                                                       
Query: 639 catattcgtcctctcgggtcctgtattccgtgttctanggtctcatattcctcttctgag 698
           |||||||||||||||||||| | ||||| ||  |||  | || ||||||| || ||||||
Sbjct: 338 catattcgtcctctcgggtcttatattc-gttctctgggctcccatattcttcctctgag 280

                                  
Query: 699 tcttccgctcgagtcctatattc 721
           |||| | ||||||||||||||||
Sbjct: 279 tctttctctcgagtcctatattc 257



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                      
Query: 450 catattcgtcctcttgggtcctatatt 476
           |||||||||||||||||||||||||||
Sbjct: 179 catattcgtcctcttgggtcctatatt 153



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 503 tctgagtctttctctaaagtcctatattcgttctctg 539
           ||||||||||  |||||||||| ||||||||||||||
Sbjct: 426 tctgagtcttcttctaaagtcccatattcgttctctg 390



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 568 atattcgttttctagggtttcatattcgt 596
           |||||||| ||||||||||||||||||||
Sbjct: 157 atattcgtcttctagggtttcatattcgt 129



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| ||||||||||| |||||||||||
Sbjct: 456 gggctcccatattcgtcctctgagtcttc 428



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||| ||||||| ||||| ||||||||||||||
Sbjct: 106 ctctaggctctcatattcttcctctgagtcttc 74



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| | ||||| |||||||||||||
Sbjct: 307 ctctgggctcccatattcttcctctgagtctt 276
to top
>gb|U95078.1|MRU95078 Merxmuellera rufa RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 500

 Score =  145 bits (73), Expect = 2e-31
 Identities = 124/141 (87%)
 Strand = Plus / Minus

                                                                       
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcc 470
           |||| |||||||| |||||| ||||||| |||| | ||||||||||||||||| ||||| 
Sbjct: 396 ggctcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggtct 337

                                                                       
Query: 471 tatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||| | |||||||| |||||||||| || |||||||||||||||| |||||||||||
Sbjct: 336 tatattcgttctctgggctcccatattcttcctctgagtctttctctagagtcctatatt 277

                                
Query: 531 cgttctctgggttcccatatt 551
           ||| |||| || |||||||||
Sbjct: 276 cgtcctctaggatcccatatt 256



 Score =  101 bits (51), Expect = 3e-18
 Identities = 83/93 (89%), Gaps = 1/93 (1%)
 Strand = Plus / Minus

                                                                       
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
           ||||||| ||||||||||||||||||||||||||| |||| |||  |||| | |||||||
Sbjct: 169 tcttctagggtttcatattcgtcctctcgggtcctatatt-cgttctctaggctctcata 111

                                            
Query: 686 ttcctcttctgagtcttccgctcgagtcctata 718
           ||| || |||||||||||| |||||||||||||
Sbjct: 110 ttcttcctctgagtcttcctctcgagtcctata 78



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 68/74 (91%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           ||||| |||||||||||||||||| | |||||||||||||||||||| ||||||||||| 
Sbjct: 493 aagatagaatcttcctctgggctcccatattcgtcctctgagtcttcctctgagtcttct 434

                         
Query: 374 tctaaagtaccata 387
           |||||||| |||||
Sbjct: 433 tctaaagtcccata 420



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 78/92 (84%)
 Strand = Plus / Minus

                                                                       
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatttgctctctgggttcccatat 496
           |||||||  ||| |||||||||||||| |||||||||||| | ||||| || || |||||
Sbjct: 169 tcttctagggtttcatattcgtcctctcgggtcctatattcgttctctaggctctcatat 110

                                           
Query: 497 tcctcttctgagtctttctctaaagtcctata 528
           || || |||||||||| ||||  |||||||||
Sbjct: 109 tcttcctctgagtcttcctctcgagtcctata 78



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 103/125 (82%), Gaps = 10/125 (8%)
 Strand = Plus / Minus

                                                                       
Query: 564 tcccatattcgttttctagggtttcatattcgtattcgtcttctaggattccatatttag 623
           |||||||||||| |||||||||||||      |||||||| |||||||| ||||||| | 
Sbjct: 264 tcccatattcgtcttctagggtttca------tattcgtcctctaggatcccatattca- 212

                                                                       
Query: 624 attcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctca 683
             ||||||  ||||||||||||||||||| | ||||| |||| ||| ||||| ||| |||
Sbjct: 211 --tcttctcgggtttcatattcgtcctctagagtcctatatt-cgtcttctagggtttca 155

                
Query: 684 tattc 688
           |||||
Sbjct: 154 tattc 150



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 71/85 (83%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| |||||| |||||| ||||| | | | |||||||| |||| || ||  ||
Sbjct: 393 tcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggtcttat 334

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| |||||||||||||||||
Sbjct: 333 attcgttctctgggctcccatattc 309



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 568 atattcgttttctagggtttcatattcgt 596
           |||||||| ||||||||||||||||||||
Sbjct: 176 atattcgtcttctagggtttcatattcgt 148



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 428 tctgagtcttcttctaaagttccatattcgtcctct 463
           |||||||||||||||||||| ||||| |||| ||||
Sbjct: 445 tctgagtcttcttctaaagtcccatactcgttctct 410



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 69/83 (83%), Gaps = 1/83 (1%)
 Strand = Plus / Minus

                                                                       
Query: 639 catattcgtcctctcgggtcctgtattccgtgttctanggtctcatattcctcttctgag 698
           |||||||||||||||||||| | |||| |||  |||  | || ||||||| || ||||||
Sbjct: 357 catattcgtcctctcgggtcttatatt-cgttctctgggctcccatattcttcctctgag 299

                                  
Query: 699 tcttccgctcgagtcctatattc 721
           |||| | || |||||||||||||
Sbjct: 298 tctttctctagagtcctatattc 276



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 56/67 (83%)
 Strand = Plus / Minus

                                                                       
Query: 410 gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtc 469
           ||||| |||||||| || ||||||||||  |||| ||| | ||||||||||||| || ||
Sbjct: 322 gggctcccatattcttcctctgagtctttctctagagtcctatattcgtcctctaggatc 263

                  
Query: 470 ctatatt 476
           | |||||
Sbjct: 262 ccatatt 256



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| ||||||||||| |||||||||||
Sbjct: 475 gggctcccatattcgtcctctgagtcttc 447



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||| ||||||| ||||| ||||||||||||||
Sbjct: 125 ctctaggctctcatattcttcctctgagtcttc 93



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| | ||||| |||||||||||||
Sbjct: 326 ctctgggctcccatattcttcctctgagtctt 295
to top
>gb|U94953.1|MAU94953 Merxmuellera arundinacea RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 456

 Score =  145 bits (73), Expect = 2e-31
 Identities = 124/141 (87%)
 Strand = Plus / Minus

                                                                       
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcc 470
           |||| |||||||| |||||| ||||||| |||| | ||||||||||||||||| ||||| 
Sbjct: 377 ggctcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggtct 318

                                                                       
Query: 471 tatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||| | |||||||| |||||||||| || ||||||||||||||||||||||||||||
Sbjct: 317 tatattcgttctctgggctcccatattcttcctctgagtctttctctaaagtcctatatt 258

                                
Query: 531 cgttctctgggttcccatatt 551
            || |||| || |||||||||
Sbjct: 257 tgtcctctaggatcccatatt 237



 Score =  101 bits (51), Expect = 3e-18
 Identities = 83/93 (89%), Gaps = 1/93 (1%)
 Strand = Plus / Minus

                                                                       
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
           ||||||| ||||||||||||||||||||||||||| |||| |||  |||| | |||||||
Sbjct: 150 tcttctagggtttcatattcgtcctctcgggtcctatatt-cgttctctaggctctcata 92

                                            
Query: 686 ttcctcttctgagtcttccgctcgagtcctata 718
           ||| || |||||||||||| |||||||||||||
Sbjct: 91  ttcttcctctgagtcttcctctcgagtcctata 59



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 78/92 (84%)
 Strand = Plus / Minus

                                                                       
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatttgctctctgggttcccatat 496
           |||||||  ||| |||||||||||||| |||||||||||| | ||||| || || |||||
Sbjct: 150 tcttctagggtttcatattcgtcctctcgggtcctatattcgttctctaggctctcatat 91

                                           
Query: 497 tcctcttctgagtctttctctaaagtcctata 528
           || || |||||||||| ||||  |||||||||
Sbjct: 90  tcttcctctgagtcttcctctcgagtcctata 59



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 116/142 (81%), Gaps = 10/142 (7%)
 Strand = Plus / Minus

                                                                       
Query: 547 atatttgttttctgggctcccatattcgttttctagggtttcatattcgtattcgtcttc 606
           ||||||||  ||| || |||||||||||| |||||||||||||      |||||||| ||
Sbjct: 262 atatttgtcctctaggatcccatattcgtcttctagggtttca------tattcgtcctc 209

                                                                       
Query: 607 taggattccatatttagattcttctanggtttcatattcgtcctctcgggtcctgtattc 666
           |||||| ||||||| |   ||||||  ||||||||||||||||||| | ||||| |||| 
Sbjct: 208 taggatcccatattca---tcttctcgggtttcatattcgtcctctagagtcctatatt- 153

                                 
Query: 667 cgtgttctanggtctcatattc 688
           ||| ||||| ||| ||||||||
Sbjct: 152 cgtcttctagggtttcatattc 131



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                     
Query: 332 gggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           |||||| | ||| |||||||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 456 gggctcccatatccgtcctctgagtcttcctctgagtcttcttctaaagtcccatatt 399



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 71/85 (83%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| |||||| |||||| ||||| | | | |||||||| |||| || ||  ||
Sbjct: 374 tcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggtcttat 315

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| |||||||||||||||||
Sbjct: 314 attcgttctctgggctcccatattc 290



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                               
Query: 428 tctgagtcttcttctaaagttccatattcgtcctct 463
           |||||||||||||||||||| |||||||||| ||||
Sbjct: 426 tctgagtcttcttctaaagtcccatattcgttctct 391



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 503 tctgagtctttctctaaagtcctatattcgttctctg 539
           ||||||||||  |||||||||| ||||||||||||||
Sbjct: 426 tctgagtcttcttctaaagtcccatattcgttctctg 390



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 568 atattcgttttctagggtttcatattcgt 596
           |||||||| ||||||||||||||||||||
Sbjct: 157 atattcgtcttctagggtttcatattcgt 129



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||| ||||||| ||||| ||||||||||||||
Sbjct: 106 ctctaggctctcatattcttcctctgagtcttc 74



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 338 catattcgtcctctcgggtc 319



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| | ||||| |||||||||||||
Sbjct: 307 ctctgggctcccatattcttcctctgagtctt 276
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>gb|AY174491.1| Paspalum conjugatum DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 519

 Score =  143 bits (72), Expect = 9e-31
 Identities = 120/136 (88%)
 Strand = Plus / Minus

                                                                       
Query: 416 ccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           |||||||| |||||||||||||| |||||| ||||||||||||||||| ||||| |||||
Sbjct: 424 ccatattcttcttctgagtcttcctctaaacttccatattcgtcctctcgggtcttatat 365

                                                                       
Query: 476 ttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttc 535
           | | |||||||| |||| ||||| || |||||||||||||||| ||||||||||||||  
Sbjct: 364 tcgttctctgggctcccgtattcttcctctgagtctttctctagagtcctatattcgtcg 305

                           
Query: 536 tctgggttcccatatt 551
           ||| || |||||||||
Sbjct: 304 tctaggatcccatatt 289



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 61/69 (88%)
 Strand = Plus / Minus

                                                                       
Query: 321 aatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaag 380
           |||||||||| ||| || | |||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 519 aatcttcctccgggttcccatattcgtcttctgagtcttcctctgagtcttcttctaaag 460

                    
Query: 381 taccatatt 389
           | |||||||
Sbjct: 459 tcccatatt 451



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 106/129 (82%), Gaps = 10/129 (7%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgt------cc 649
           |||||||| |||||||| ||||||| |   ||||||| ||||||||||||||      ||
Sbjct: 313 tattcgtcgtctaggatcccatattca---tcttctagggtttcatattcgtcctctccc 257

                                                                       
Query: 650 tctcgggtcctgtattccgtgttctanggtctcatattcctcttctgagtcttccgctcg 709
           ||||||||||| |||| |||  |||  | |||||||||| || |||||||||||| ||||
Sbjct: 256 tctcgggtcctatatt-cgttctctgggctctcatattcatcctctgagtcttcctctcg 198

                    
Query: 710 agtcctata 718
           |||||||||
Sbjct: 197 agtcctata 189



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 72/85 (84%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| ||||||||||||| ||||||| | | |||||||| |||| || ||  ||
Sbjct: 426 tcccatattcttcttctgagtcttcctctaaacttccatattcgtcctctcgggtcttat 367

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| ||||||||||| |||||
Sbjct: 366 attcgttctctgggctcccgtattc 342



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||| | |||||||| || ||||||| || |||||||||| |||| 
Sbjct: 258 cctctcgggtcctatattcgttctctgggctctcatattcatcctctgagtcttcctctc 199

                     
Query: 519 aagtcctata 528
            |||||||||
Sbjct: 198 gagtcctata 189



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 356 tcttcttctgagtcttcctctaaagtaccatatt 389
           |||||||||||||||||||||||| | |||||||
Sbjct: 418 tcttcttctgagtcttcctctaaacttccatatt 385



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 485 gggttcccatattcctcttctgagtctttctct 517
           |||||||||||||| ||||||||||||| ||||
Sbjct: 508 gggttcccatattcgtcttctgagtcttcctct 476



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 478 tctgagtcttcttctaaagtcccatattc 450



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 297 tcccatattcatcttctagggtttcatattcgt 265



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| ||||| ||||||||||||||
Sbjct: 236 ctctgggctctcatattcatcctctgagtcttc 204



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| ||||||| |||||||||||||
Sbjct: 359 ctctgggctcccgtattcttcctctgagtctt 328



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 416 ccatattcgtcttctgagtcttc 438
           |||||||||||||||||||||||
Sbjct: 502 ccatattcgtcttctgagtcttc 480



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 521 gtcctatattcgttctctgggttcccatatt 551
           ||||||||||||||||||||| || ||||||
Sbjct: 250 gtcctatattcgttctctgggctctcatatt 220



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 390 catattcgtcctctcgggtc 371
to top
>gb|AY174479.1| Homolepis glutinosa DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 540

 Score =  143 bits (72), Expect = 9e-31
 Identities = 120/136 (88%)
 Strand = Plus / Minus

                                                                       
Query: 416 ccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           |||||||| |||||||||||||| |||| |||||| |||||||||||| ||||| |||||
Sbjct: 425 ccatattcatcttctgagtcttcctctagagttccgtattcgtcctctcgggtcttatat 366

                                                                       
Query: 476 ttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttc 535
           | | |||||||| ||| |||||| || |||||||||||||||| |||||||||||||| |
Sbjct: 365 tcgttctctgggctccgatattcttcctctgagtctttctctagagtcctatattcgtcc 306

                           
Query: 536 tctgggttcccatatt 551
           ||| || |||||||||
Sbjct: 305 tctaggatcccatatt 290



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 65/76 (85%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           ||||| ||||||||||| | |||| | ||||| || ||||||||||| ||||||||||| 
Sbjct: 527 aagatagaatcttcctccgagctcccatattcatcttctgagtcttcctctgagtcttct 468

                           
Query: 374 tctaaagtaccatatt 389
           | |||||| |||||||
Sbjct: 467 tttaaagtcccatatt 452



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 61/71 (85%), Gaps = 3/71 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |   ||||||| ||||||||||||||||||| | 
Sbjct: 314 tattcgtcctctaggatcccatattca---tcttctagggtttcatattcgtcctctaga 258

                      
Query: 656 gtcctgtattc 666
           ||||| |||||
Sbjct: 257 gtcctatattc 247



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||| | |||||||| ||  |||||| ||||||||||||| |||| 
Sbjct: 217 cctctcgggtcctatattcgttctctgggctcttatattcgtcttctgagtcttcctctc 158

                     
Query: 519 aagtcctata 528
            |||||||||
Sbjct: 157 gagtcctata 148



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 71/85 (83%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| ||||||||||||| ||||| ||| |  ||||||| |||| || ||  ||
Sbjct: 427 tcccatattcatcttctgagtcttcctctagagttccgtattcgtcctctcgggtcttat 368

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| |||||||||| ||||||
Sbjct: 367 attcgttctctgggctccgatattc 343



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 61/71 (85%), Gaps = 1/71 (1%)
 Strand = Plus / Minus

                                                                       
Query: 648 cctctcgggtcctgtattccgtgttctanggtctcatattcctcttctgagtcttccgct 707
           ||||||||||||| |||| |||  |||  | ||| |||||| ||||||||||||||| ||
Sbjct: 217 cctctcgggtcctatatt-cgttctctgggctcttatattcgtcttctgagtcttcctct 159

                      
Query: 708 cgagtcctata 718
           |||||||||||
Sbjct: 158 cgagtcctata 148



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 298 tcccatattcatcttctagggtttcatattcgt 266



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                      
Query: 418 atattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatt 476
           ||||||||||||||||||||| |||  ||| | ||| || |||||| |||||| |||||
Sbjct: 183 atattcgtcttctgagtcttcctctcgagtcctatactcttcctctcgggtccgatatt 125



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 489 tcccatattcctcttctgagtctttctct 517
           |||||||||| ||||||||||||| ||||
Sbjct: 505 tcccatattcatcttctgagtcttcctct 477



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           ||||||||||||| |||||| ||||||||
Sbjct: 479 tctgagtcttcttttaaagtcccatattc 451



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 596 tattcgtcttctaggattccatatt 620
           |||||||||||||||||| ||||||
Sbjct: 251 tattcgtcttctaggatttcatatt 227



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 521 gtcctatattcgttctctggg 541
           |||||||||||||||||||||
Sbjct: 209 gtcctatattcgttctctggg 189



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||  |||||||| |||||||||||
Sbjct: 195 ctctgggctcttatattcgtcttctgagtcttc 163



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 287 tcttctagggtttcatattcgtcctctagagtcctatatt 248



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 568 atattcgttttctagggtttcatattcg 595
           |||||||| ||||||| |||||||||||
Sbjct: 252 atattcgtcttctaggatttcatattcg 225
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>gb|AY174474.1| Arundinella hirta DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 489

 Score =  143 bits (72), Expect = 9e-31
 Identities = 120/136 (88%)
 Strand = Plus / Minus

                                                                       
Query: 416 ccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           |||||||| |||||||||||||| |||| ||||||||||||||||||| ||||| |||||
Sbjct: 380 ccatattcttcttctgagtcttcctctagagttccatattcgtcctctcgggtcttatat 321

                                                                       
Query: 476 ttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttc 535
           |   |||||||| |||||||||| || |||||||||||||||| ||||||||||||||  
Sbjct: 320 tcattctctgggctcccatattcttcctctgagtctttctctagagtcctatattcgtct 261

                           
Query: 536 tctgggttcccatatt 551
           ||| || |||||||||
Sbjct: 260 tctaggatcccatatt 245



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                    
Query: 320 gaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctct 376
           ||||||||||| |||||| | |||||||| ||||||||||| || ||||||||||||
Sbjct: 488 gaatcttcctccgggctcccatattcgtcttctgagtcttcctccgagtcttcctct 432



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 72/85 (84%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| ||||||||||||| ||||| ||| | |||||||| |||| || ||  ||
Sbjct: 382 tcccatattcttcttctgagtcttcctctagagttccatattcgtcctctcgggtcttat 323

                                    
Query: 549 atttgttttctgggctcccatattc 573
           |||  || |||||||||||||||||
Sbjct: 322 attcattctctgggctcccatattc 298



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 61/71 (85%), Gaps = 3/71 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           ||||||||||||||||| ||||||| |   |||||||  |||||||||||||| ||||| 
Sbjct: 269 tattcgtcttctaggatcccatattca---tcttctagagtttcatattcgtcttctcga 213

                      
Query: 656 gtcctgtattc 666
           ||||| |||||
Sbjct: 212 gtcctatattc 202



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                      
Query: 347 tcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           ||||| |||||||| ||||||||||| |||||||| |||||||
Sbjct: 449 tcctccgagtcttcctctgagtcttcttctaaagtcccatatt 407



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 356 tcttcttctgagtcttcctctaaagtaccatatt 389
           |||||||||||||||||||||| ||| |||||||
Sbjct: 374 tcttcttctgagtcttcctctagagttccatatt 341



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 543 tcccatatttgttttctgggctcccatattcgttttct 580
           ||||||||||||| ||||||||| ||||||||| ||||
Sbjct: 163 tcccatatttgttctctgggctctcatattcgtcttct 126



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| |||||||||||||||||||||||
Sbjct: 476 gggctcccatattcgtcttctgagtcttc 448



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 434 tctgagtcttcttctaaagtcccatattc 406



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 547 atatttgttttctgggctcccatattcgttttctagggtttcatattcgt 596
           ||||| || |||| || |||||||||| | |||||| |||||||||||||
Sbjct: 270 atattcgtcttctaggatcccatattcatcttctagagtttcatattcgt 221



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 596 tattcgtcttctaggattccatatt 620
           |||||||||||||||||| ||||||
Sbjct: 206 tattcgtcttctaggatttcatatt 182



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 328 ctctgggctctcgtattcgtcctctgagt 356
           |||||||||||| |||||||| |||||||
Sbjct: 150 ctctgggctctcatattcgtcttctgagt 122



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 489 tcccatattcctcttctgagtctt 512
           |||||||||| |||||||||||||
Sbjct: 472 tcccatattcgtcttctgagtctt 449



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| ||||||||||||||| || |||| | ||||||
Sbjct: 379 catattcttcttctgagtcttcctctagagttccatattc 340



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 346 catattcgtcctctcgggtc 327



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| | ||||| |||||||||||||
Sbjct: 315 ctctgggctcccatattcttcctctgagtctt 284



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| || |||||||||| | || |||||||||||||
Sbjct: 304 catattcttcctctgagtctttctctagagtcctatattc 265



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 568 atattcgttttctagggtttcatattcg 595
           |||||||| ||||||| |||||||||||
Sbjct: 207 atattcgtcttctaggatttcatattcg 180



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                       
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||||||||||||| ||| |||  ||| | ||| || |||||| |||||| |||||
Sbjct: 139 catattcgtcttctgagtgttcctcttgagtcctatactcttcctctcgggtccgatatt 80
to top
>gb|U95080.1|MSU95080 Merxmuellera stricta RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 449

 Score =  143 bits (72), Expect = 9e-31
 Identities = 156/184 (84%)
 Strand = Plus / Minus

                                                                       
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcc 470
           |||| |||||||| |||||| ||||||| || | | ||||||||||||||||| ||||| 
Sbjct: 342 ggctcccatattcttcttctaagtcttcctcgagaattccatattcgtcctctcgggtct 283

                                                                       
Query: 471 tatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||| | |||||||| |||||||||| || |||||||||||||||| |||||||||||
Sbjct: 282 tatattggttctctgggctcccatattcttcctctgagtctttctctagagtcctatatt 223

                                                                       
Query: 531 cgttctctgggttcccatatttgttttctgggctcccatattcgttttctagggtttcat 590
           ||| |||| || |||| |||| || |||| || |  ||||||||| ||||||| | ||||
Sbjct: 222 cgtcctctaggatcccgtattcgtcttctagggtttcatattcgtcttctaggatctcat 163

               
Query: 591 attc 594
           ||||
Sbjct: 162 attc 159



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 54/58 (93%)
 Strand = Plus / Minus

                                                                     
Query: 319 ggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctct 376
           |||||| |||||||||||| | |||||||||||||||||||| |||||||||||||||
Sbjct: 446 ggaatcctcctctgggctcccatattcgtcctctgagtcttcctctgagtcttcctct 389



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 126/155 (81%), Gaps = 10/155 (6%)
 Strand = Plus / Minus

                                                                       
Query: 564 tcccatattcgttttctagggtttcatattcgtattcgtcttctaggattccatatttag 623
           |||| ||||||| ||||||||||||||||||||      ||||||||||  |||||| | 
Sbjct: 210 tcccgtattcgtcttctagggtttcatattcgt------cttctaggatctcatattca- 158

                                                                       
Query: 624 attcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctca 683
             ||||||  |||||  |||||||  ||||||| | | ||||| || ||||| | |||||
Sbjct: 157 --tcttctcgggttttgtattcgttttctcggggcttatattc-gtcttctaggctctca 101

                                              
Query: 684 tattcctcttctgagtcttccgctcgagtcctata 718
           ||||| ||||||||||||||| |||||||||||||
Sbjct: 100 tattcttcttctgagtcttcctctcgagtcctata 66



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                      
Query: 347 tcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           |||||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 406 tcctctgagtcttcctctgagtcttcttctaaagtcccatatt 364



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 391 tctgagtcttcttctaaagtcccatattc 363



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                 
Query: 410 gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctct 463
           ||||| |||||||| || ||||||||||  |||| ||| | |||||||||||||
Sbjct: 268 gggctcccatattcttcctctgagtctttctctagagtcctatattcgtcctct 215



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| ||||||||||| |||||||||||
Sbjct: 433 gggctcccatattcgtcctctgagtcttc 405



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 48/56 (85%), Gaps = 1/56 (1%)
 Strand = Plus / Minus

                                                                   
Query: 640 atattcgtcctctcgggtcctgtattccgtgttctanggtctcatattcctcttct 695
           ||||||||||||| || ||| ||||| ||| ||||| ||| |||||||| ||||||
Sbjct: 227 atattcgtcctctaggatcccgtatt-cgtcttctagggtttcatattcgtcttct 173



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 356 tcttcttctgagtcttcctct 376
           |||||||||||||||||||||
Sbjct: 97  tcttcttctgagtcttcctct 77



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 492 catattcctcttctgagtctttctctaaagtcctata 528
           ||||||| ||||||||||||| ||||  |||||||||
Sbjct: 102 catattcttcttctgagtcttcctctcgagtcctata 66



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 303 catattcgtcctctcgggtc 284



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| | ||||| |||||||||||||
Sbjct: 272 ctctgggctcccatattcttcctctgagtctt 241



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| || |||||||||| | || |||||||||||||
Sbjct: 261 catattcttcctctgagtctttctctagagtcctatattc 222
to top
>gb|AF372195.1| Panicum ovuliferum DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 575

 Score =  141 bits (71), Expect = 4e-30
 Identities = 109/124 (87%)
 Strand = Plus / Minus

                                                                       
Query: 266 agactaaattcttttgttcctcgatgctcaatcaaaccctcnnnnnnnaagatggaatct 325
           |||||||||||||||||||||||||||||||| ||||||||       ||||||||||||
Sbjct: 575 agactaaattcttttgttcctcgatgctcaataaaaccctctttttttaagatggaatct 516

                                                                       
Query: 326 tcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtacca 385
           ||||| |||||| | |||||||| ||||||||||| ||||||||||| |||||||| |||
Sbjct: 515 tcctccgggctcccatattcgtcttctgagtcttcctctgagtcttcttctaaagtccca 456

               
Query: 386 tatt 389
           ||||
Sbjct: 455 tatt 452



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 89/102 (87%)
 Strand = Plus / Minus

                                                                       
Query: 450 catattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgagt 509
           |||||||| ||||| ||||| |||||| | |||||||| |||| ||||| || |||||||
Sbjct: 370 catattcgccctctcgggtcttatattcgttctctgggctcccgtattcttcctctgagt 311

                                                     
Query: 510 ctttctctaaagtcctatattcgttctctgggttcccatatt 551
           ||||||||| |||||||||||||| |||| || |||||||||
Sbjct: 310 ctttctctagagtcctatattcgtcctctaggatcccatatt 269



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 61/71 (85%), Gaps = 3/71 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |   ||||||| ||||||||||||||||||| | 
Sbjct: 293 tattcgtcctctaggatcccatattca---tcttctagggtttcatattcgtcctctaga 237

                      
Query: 656 gtcctgtattc 666
           ||||| |||||
Sbjct: 236 gtcctatattc 226



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                        
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgt 533
           ||||||| || ||||||||||||| ||||| ||||||||||||||
Sbjct: 427 tcccataatcttcttctgagtcttcctctagagtcctatattcgt 383



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| ||||||||||||||||||||
Sbjct: 174 ctctgggctctcatattcgtcctctgagtcttc 142



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                       
Query: 465 gggtcctatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcc 524
           |||||||||||| | |||||||| || ||||||| || |||||||||| ||||  |||||
Sbjct: 190 gggtcctatattcgttctctgggctctcatattcgtcctctgagtcttcctctcgagtcc 131

               
Query: 525 tata 528
           ||||
Sbjct: 130 tata 127



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           |||||||||| || |||||||||||| |||||||||||||
Sbjct: 166 tctcatattcgtcctctgagtcttcctctcgagtcctata 127



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| |||||||||||||||||||||||
Sbjct: 509 gggctcccatattcgtcttctgagtcttc 481



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 479 tctgagtcttcttctaaagtcccatattc 451



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 277 tcccatattcatcttctagggtttcatattcgt 245



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 690 tcttctgagtcttccgctcgagtcctatattc 721
           ||||||||||||||| || |||||||||||||
Sbjct: 416 tcttctgagtcttcctctagagtcctatattc 385



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| ||||||| |||||||||||||
Sbjct: 339 ctctgggctcccgtattcttcctctgagtctt 308



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 521 gtcctatattcgttctctgggttcccatatt 551
           ||||||||||||||||||||| || ||||||
Sbjct: 188 gtcctatattcgttctctgggctctcatatt 158



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 356 tcttcttctgagtcttcctcta 377
           ||||||||||||||||||||||
Sbjct: 419 tcttcttctgagtcttcctcta 398



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 626 tcttctanggtttcatattcgtcctctcgggtc 658
           ||||||| | ||||||||||| |||||||||||
Sbjct: 383 tcttctaggatttcatattcgccctctcgggtc 351



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 489 tcccatattcctcttctgagtctttctct 517
           |||||||||| ||||||||||||| ||||
Sbjct: 505 tcccatattcgtcttctgagtcttcctct 477



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 596 tattcgtcttctaggattccatatt 620
           |||||||||||||||||| ||||||
Sbjct: 389 tattcgtcttctaggatttcatatt 365



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 596 tattcgtcttctaggattccatatt 620
           |||||||||||||||||| ||||||
Sbjct: 230 tattcgtcttctaggatttcatatt 206



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 416 ccatattcgtcttctgagtcttcttctaaagttccatattcgtc 459
           ||||| || |||||||||||||| |||| ||| | |||||||||
Sbjct: 425 ccataatcttcttctgagtcttcctctagagtcctatattcgtc 382



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 568 atattcgttttctagggtttcatattcg 595
           |||||||| ||||||| |||||||||||
Sbjct: 390 atattcgtcttctaggatttcatattcg 363



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 266 tcttctagggtttcatattcgtcctctagagtcctatatt 227



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 568 atattcgttttctagggtttcatattcg 595
           |||||||| ||||||| |||||||||||
Sbjct: 231 atattcgtcttctaggatttcatattcg 204



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                       
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||||| ||||||||||| |||  ||| | ||| || |||||| |||||| |||||
Sbjct: 163 catattcgtcctctgagtcttcctctcgagtcctatactcttcctctcgggtccgatatt 104
to top
>gb|AF372191.1| Panicum millegrana DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 515

 Score =  141 bits (71), Expect = 4e-30
 Identities = 109/124 (87%)
 Strand = Plus / Minus

                                                                       
Query: 266 agactaaattcttttgttcctcgatgctcaatcaaaccctcnnnnnnnaagatggaatct 325
           |||||||||||||||||||||||||||||||| ||||||||       ||||||||||||
Sbjct: 515 agactaaattcttttgttcctcgatgctcaataaaaccctctttttttaagatggaatct 456

                                                                       
Query: 326 tcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtacca 385
           ||||| |||||| | |||||||| ||||||||||| ||||||||||| |||||||| |||
Sbjct: 455 tcctccgggctcccatattcgtcttctgagtcttcctctgagtcttcttctaaagtccca 396

               
Query: 386 tatt 389
           ||||
Sbjct: 395 tatt 392



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                        
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgt 533
           |||||||||| ||||||||||||| ||||| ||||||||||||||
Sbjct: 367 tcccatattcttcttctgagtcttcctctagagtcctatattcgt 323



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||| | |||||||| || ||||||| || |||||||||| |||| 
Sbjct: 160 cctctcgggtcctatattcgttctctgggctctcatattcgtcctctgagtcttcctctc 101

                     
Query: 519 aagtcctata 528
            |||||||||
Sbjct: 100 gagtcctata 91



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| ||||||||||||||||||||
Sbjct: 138 ctctgggctctcatattcgtcctctgagtcttc 106



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| ||||||||||||||| || |||||||||||||
Sbjct: 364 catattcttcttctgagtcttcctctagagtcctatattc 325



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                               
Query: 503 tctgagtctttctctaaagtcctatattcgttctct 538
           |||||||||||||||| |||||||||||||| ||||
Sbjct: 239 tctgagtctttctctagagtcctatattcgtcctct 204



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 61/71 (85%), Gaps = 1/71 (1%)
 Strand = Plus / Minus

                                                                       
Query: 648 cctctcgggtcctgtattccgtgttctanggtctcatattcctcttctgagtcttccgct 707
           ||||||||||||| |||| |||  |||  | |||||||||| || |||||||||||| ||
Sbjct: 160 cctctcgggtcctatatt-cgttctctgggctctcatattcgtcctctgagtcttcctct 102

                      
Query: 708 cgagtcctata 718
           |||||||||||
Sbjct: 101 cgagtcctata 91



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| |||||||||||||||||||||||
Sbjct: 449 gggctcccatattcgtcttctgagtcttc 421



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 419 tctgagtcttcttctaaagtcccatattc 391



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 416 ccatattcgtcttctgagtcttcttctaaagttccatattcgtc 459
           |||||||| |||||||||||||| |||| ||| | |||||||||
Sbjct: 365 ccatattcttcttctgagtcttcctctagagtcctatattcgtc 322



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 521 gtcctatattcgttctctgggttcccatatt 551
           ||||||||||||||||||||| || ||||||
Sbjct: 152 gtcctatattcgttctctgggctctcatatt 122



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 356 tcttcttctgagtcttcctcta 377
           ||||||||||||||||||||||
Sbjct: 359 tcttcttctgagtcttcctcta 338



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 489 tcccatattcctcttctgagtctttctct 517
           |||||||||| ||||||||||||| ||||
Sbjct: 445 tcccatattcgtcttctgagtcttcctct 417



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 596 tattcgtcttctaggattccatatt 620
           |||||||||||||||||| ||||||
Sbjct: 329 tattcgtcttctaggatttcatatt 305



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                            
Query: 428 tctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatt 476
           ||||||||||  |||| ||| | ||||||||||||| | ||||||||||
Sbjct: 239 tctgagtctttctctagagtcctatattcgtcctctagagtcctatatt 191



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 596 tattcgtcttctaggattccatatt 620
           |||||||||||||||||| ||||||
Sbjct: 194 tattcgtcttctaggatttcatatt 170



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 568 atattcgttttctagggtttcatattcg 595
           |||||||| ||||||| |||||||||||
Sbjct: 330 atattcgtcttctaggatttcatattcg 303



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 568 atattcgttttctagggtttcatattcg 595
           |||||||| ||||||| |||||||||||
Sbjct: 195 atattcgtcttctaggatttcatattcg 168
to top
>gb|AF372176.1| Echinolaena inflexa DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 519

 Score =  141 bits (71), Expect = 4e-30
 Identities = 113/127 (88%)
 Strand = Plus / Minus

                                                                       
Query: 425 tcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatttgctctct 484
           |||||||||||||| |||| ||||||||||||||||||| ||||| |||||| | |||||
Sbjct: 371 tcttctgagtcttcctctagagttccatattcgtcctctcgggtcttatattcgttctct 312

                                                                       
Query: 485 gggttcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttc 544
           ||| |||| ||||| || |||||||||||||||| |||||||||||||| |||| || ||
Sbjct: 311 gggctcccgtattcttcctctgagtctttctctagagtcctatattcgtcctctaggatc 252

                  
Query: 545 ccatatt 551
           |||||||
Sbjct: 251 ccatatt 245



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 93/112 (83%)
 Strand = Plus / Minus

                                                                       
Query: 277 ttttgttcctcgatgctcaatcaaaccctcnnnnnnnaagatggaatcttcctctgggct 336
           ||||||||||||||||||||| ||||||||       ||||| |||| ||||||   |||
Sbjct: 519 ttttgttcctcgatgctcaataaaaccctcttttgttaagatagaattttcctccaagct 460

                                                               
Query: 337 ctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtaccatat 388
           | | |||||||| ||||||||||| ||||||||||| |||||||| ||||||
Sbjct: 459 cccatattcgtcttctgagtcttcctctgagtcttcttctaaagtcccatat 408



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 62/71 (87%), Gaps = 1/71 (1%)
 Strand = Plus / Minus

                                                                       
Query: 648 cctctcgggtcctgtattccgtgttctanggtctcatattcctcttctgagtcttccgct 707
           ||||||||||||| ||||| || ||||  | |||||||||| || |||||||||||| ||
Sbjct: 214 cctctcgggtcctatattc-gttttctgggctctcatattcatcctctgagtcttcctct 156

                      
Query: 708 cgagtcctata 718
           |||||||||||
Sbjct: 155 cgagtcctata 145



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                       
Query: 500 tcttctgagtctttctctaaagtcctatattcgttctctgggttcccatatttgttttct 559
           ||||||||||||| ||||| ||| | |||||||| |||| || ||  ||||| ||| |||
Sbjct: 371 tcttctgagtcttcctctagagttccatattcgtcctctcgggtcttatattcgttctct 312

                         
Query: 560 gggctcccatattc 573
           |||||||| |||||
Sbjct: 311 gggctcccgtattc 298



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||| | | |||||| || ||||||| || |||||||||| |||| 
Sbjct: 214 cctctcgggtcctatattcgttttctgggctctcatattcatcctctgagtcttcctctc 155

                     
Query: 519 aagtcctata 528
            |||||||||
Sbjct: 154 gagtcctata 145



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| ||||||| |||||||||||||
Sbjct: 315 ctctgggctcccgtattcttcctctgagtctt 284



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 329 tctgggctctcgtattcgtcctctgagtcttc 360
           ||||||||||| ||||| ||||||||||||||
Sbjct: 191 tctgggctctcatattcatcctctgagtcttc 160



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 416 ccatattcgtcttctgagtcttc 438
           |||||||||||||||||||||||
Sbjct: 458 ccatattcgtcttctgagtcttc 436



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 428 tctgagtcttcttctaaagttccatat 454
           |||||||||||||||||||| ||||||
Sbjct: 434 tctgagtcttcttctaaagtcccatat 408



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 359 tcttctgagtcttcctctaaagtaccatatt 389
           ||||||||||||||||||| ||| |||||||
Sbjct: 371 tcttctgagtcttcctctagagttccatatt 341



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 489 tcccatattcctcttctgagtctttctct 517
           |||||||||| ||||||||||||| ||||
Sbjct: 460 tcccatattcgtcttctgagtcttcctct 432



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 346 catattcgtcctctcgggtc 327



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 564 tcccatattcgttttctagggtttcatattcg 595
           |||||||||| | ||||||| |||||||||||
Sbjct: 253 tcccatattcatcttctaggatttcatattcg 222
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>gb|AF064760.1|AF064760 Streptochaeta angustifolia DNA-directed RNA polymerase beta'
           subunit 2 (rpoC2) gene, chloroplast gene encoding
           chloroplast protein, partial cds
          Length = 752

 Score =  141 bits (71), Expect = 4e-30
 Identities = 106/120 (88%)
 Strand = Plus / Minus

                                                                       
Query: 241 ccgatctacttctttttggtattttagactaaattcttttgttcctcgatgctcaatcaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 ccgatctacttctttttggtattttagactaaattcttttgttcctcgatgctcaatcaa 661

                                                                       
Query: 301 accctcnnnnnnnaagatggaatcttcctctgggctctcgtattcgtcctctgagtcttc 360
           ||||||       || |||||||||||||| | |||| | ||||| |||||||| |||||
Sbjct: 660 accctcttttttgaaaatggaatcttcctccgtgctcccatattcttcctctgaatcttc 601



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 106/128 (82%)
 Strand = Plus / Minus

                                                                       
Query: 469 cctatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctata 528
           |||||||| | ||||| || |||||||||| || |||||||||| |||||   ||| |||
Sbjct: 321 cctatattcgttctctaggatcccatattcttcctctgagtcttcctctaggatcccata 262

                                                                       
Query: 529 ttcgttctctgggttcccatatttgttttctgggctcccatattcgttttctagggtttc 588
           ||||| |||  || ||| ||||| ||| |||||| ||||||||||||  |||||||| ||
Sbjct: 261 ttcgtcctccagggtcctatattcgttctctgggatcccatattcgtcctctagggtctc 202

                   
Query: 589 atattcgt 596
           ||||||||
Sbjct: 201 atattcgt 194



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                       
Query: 416 ccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           |||||||| || ||||||||||| ||||   | ||||||||||||||  |||||||||||
Sbjct: 299 ccatattcttcctctgagtcttcctctaggatcccatattcgtcctccagggtcctatat 240

                                  
Query: 476 ttgctctctgggttcccatattc 498
           | | |||||||| ||||||||||
Sbjct: 239 tcgttctctgggatcccatattc 217



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 39/41 (95%)
 Strand = Plus / Minus

                                                    
Query: 323 tcttcctctgggctctcgtattcgtcctctgagtcttcttc 363
           ||||||||||||||| | |||||||||||||||||||||||
Sbjct: 473 tcttcctctgggctcccatattcgtcctctgagtcttcttc 433



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                         
Query: 320 gaatcttcctctgggctctcgtattcgtcctctgagtcttcttctg 365
           |||||||||||| || || ||||||| |||||||||||||||||||
Sbjct: 608 gaatcttcctctaggatcccgtattcttcctctgagtcttcttctg 563



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 322 atcttcctctgggctctcgtattcgtcctctgagtcttcttctg 365
           ||||||||| |||||| | ||||||||||| |||||||| ||||
Sbjct: 507 atcttcctccgggctcccatattcgtcctccgagtcttcctctg 464



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 410 gggctgccatattcgtcttctgagtcttcttc 441
           ||||| ||||||||||| ||||||||||||||
Sbjct: 464 gggctcccatattcgtcctctgagtcttcttc 433



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 482 tctgggttcccatattcctcttctgagtctt 512
           ||||||||||||||||| || ||||||||||
Sbjct: 566 tctgggttcccatattcgtcctctgagtctt 536



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 326 tcctctgggctctcgtattcgtcctctgagtcttc 360
           |||||| || |||| ||||||||||||||||||||
Sbjct: 215 tcctctagggtctcatattcgtcctctgagtcttc 181



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 323 tcttcctctgggctctcgtattcgtcctctgagtcttc 360
           ||||| |||||| || | ||||||||||||||||||||
Sbjct: 572 tcttcttctgggttcccatattcgtcctctgagtcttc 535



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 672 tctanggtctcatattcctcttctgagtcttcc 704
           |||| |||||||||||| || ||||||||||||
Sbjct: 212 tctagggtctcatattcgtcctctgagtcttcc 180
to top
>gb|AF355985.1| Merxmuellera cincta subsp. sericea RNA polymerase beta-subunit
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 444

 Score =  139 bits (70), Expect = 1e-29
 Identities = 157/186 (84%)
 Strand = Plus / Minus

                                                                       
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcc 470
           |||| |||||||| |||||| ||||||| |||| | ||||||||||||||||| ||||| 
Sbjct: 342 ggctcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggtct 283

                                                                       
Query: 471 tatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||| | |||||||| |||||||||  || |||||||||||||||| |||||||||||
Sbjct: 282 tatattcgttctctgggctcccatattgttcctctgagtctttctctagagtcctatatt 223

                                                                       
Query: 531 cgttctctgggttcccatatttgttttctgggctcccatattcgttttctagggtttcat 590
           |||  ||| || |  |||||| ||  ||| |  ||| |||||||| ||||||||||||||
Sbjct: 222 cgtcttctagggtttcatattcgtcctctagagtcctatattcgtcttctagggtttcat 163

                 
Query: 591 attcgt 596
           ||||||
Sbjct: 162 attcgt 157



 Score =  103 bits (52), Expect = 8e-19
 Identities = 70/76 (92%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           ||||| |||||||||||||||||| | |||||||||||||||||||| ||||||||||| 
Sbjct: 439 aagatagaatcttcctctgggctcccatattcgtcctctgagtcttcctctgagtcttct 380

                           
Query: 374 tctaaagtaccatatt 389
           |||||||| |||||||
Sbjct: 379 tctaaagtcccatatt 364



 Score =  101 bits (51), Expect = 3e-18
 Identities = 83/93 (89%), Gaps = 1/93 (1%)
 Strand = Plus / Minus

                                                                       
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
           ||||||| ||||||||||||||||||||||||||| |||| |||  |||| | |||||||
Sbjct: 178 tcttctagggtttcatattcgtcctctcgggtcctatatt-cgttctctaggctctcata 120

                                            
Query: 686 ttcctcttctgagtcttccgctcgagtcctata 718
           ||| || |||||||||||| |||||||||||||
Sbjct: 119 ttcttcctctgagtcttcctctcgagtcctata 87



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 78/92 (84%)
 Strand = Plus / Minus

                                                                       
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatttgctctctgggttcccatat 496
           |||||||  ||| |||||||||||||| |||||||||||| | ||||| || || |||||
Sbjct: 178 tcttctagggtttcatattcgtcctctcgggtcctatattcgttctctaggctctcatat 119

                                           
Query: 497 tcctcttctgagtctttctctaaagtcctata 528
           || || |||||||||| ||||  |||||||||
Sbjct: 118 tcttcctctgagtcttcctctcgagtcctata 87



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 55/63 (87%), Gaps = 1/63 (1%)
 Strand = Plus / Minus

                                                                       
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
           ||||||| ||||||||||||||||||| | ||||| |||| ||| ||||| ||| |||||
Sbjct: 220 tcttctagggtttcatattcgtcctctagagtcctatatt-cgtcttctagggtttcata 162

              
Query: 686 ttc 688
           |||
Sbjct: 161 ttc 159



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                               
Query: 428 tctgagtcttcttctaaagttccatattcgtcctct 463
           |||||||||||||||||||| |||||||||| ||||
Sbjct: 391 tctgagtcttcttctaaagtcccatattcgttctct 356



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 503 tctgagtctttctctaaagtcctatattcgttctctg 539
           ||||||||||  |||||||||| ||||||||||||||
Sbjct: 391 tctgagtcttcttctaaagtcccatattcgttctctg 355



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| ||||||||||| |||||||||||
Sbjct: 421 gggctcccatattcgtcctctgagtcttc 393



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||| ||||||| ||||| ||||||||||||||
Sbjct: 134 ctctaggctctcatattcttcctctgagtcttc 102



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 303 catattcgtcctctcgggtc 284
to top
>gb|U95362.1|U95362 Prionanthium ecklonii RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 486

 Score =  139 bits (70), Expect = 1e-29
 Identities = 157/186 (84%)
 Strand = Plus / Minus

                                                                       
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcc 470
           |||| |||||||| || ||| ||||||| |||| | |||||||||| |||||| ||||| 
Sbjct: 377 ggctcccatattcttcctctaagtcttcctctagaattccatattcatcctctcgggtct 318

                                                                       
Query: 471 tatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||| | |||||||| |||||||||| || |||||||||||||||| |||||||||||
Sbjct: 317 tatattcgttctctgggctcccatattcttcctctgagtctttctctagagtcctatatt 258

                                                                       
Query: 531 cgttctctgggttcccatatttgttttctgggctcccatattcgttttctagggtttcat 590
           ||| |||| || ||||||||| || |||| || |  ||||||||| ||||| || | |||
Sbjct: 257 cgtcctctaggatcccatattcgtcttctagggtttcatattcgtcttctaaggctccat 198

                 
Query: 591 attcgt 596
           ||||||
Sbjct: 197 attcgt 192



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 67/76 (88%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           ||||||||  |||||||||||||  | ||||||| |||||||||||| ||||||||||| 
Sbjct: 474 aagatggagccttcctctgggcttccatattcgttctctgagtcttcctctgagtcttct 415

                           
Query: 374 tctaaagtaccatatt 389
           |||||||| |||||||
Sbjct: 414 tctaaagtcccatatt 399



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                               
Query: 428 tctgagtcttcttctaaagttccatattcgtcctct 463
           |||||||||||||||||||| |||||||||| ||||
Sbjct: 426 tctgagtcttcttctaaagtcccatattcgttctct 391



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 503 tctgagtctttctctaaagtcctatattcgttctctg 539
           ||||||||||  |||||||||| ||||||||||||||
Sbjct: 426 tctgagtcttcttctaaagtcccatattcgttctctg 390



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 67/80 (83%), Gaps = 1/80 (1%)
 Strand = Plus / Minus

                                                                       
Query: 639 catattcgtcctctcgggtcctgtattccgtgttctanggtctcatattcctcttctgag 698
           |||||||||||||||| | ||  ||||| || ||||| | ||||||||||||  ||||| 
Sbjct: 158 catattcgtcctctcgcggcccatattc-gttttctaggctctcatattcctgctctgat 100

                               
Query: 699 tcttccgctcgagtcctata 718
           |||||| || ||||||||||
Sbjct: 99  tcttcctctagagtcctata 80



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 56/67 (83%)
 Strand = Plus / Minus

                                                                       
Query: 410 gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtc 469
           ||||| |||||||| || ||||||||||  |||| ||| | ||||||||||||| || ||
Sbjct: 303 gggctcccatattcttcctctgagtctttctctagagtcctatattcgtcctctaggatc 244

                  
Query: 470 ctatatt 476
           | |||||
Sbjct: 243 ccatatt 237



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 565 cccatattcgttttctagggtttcatattc 594
           ||||||||||||||||||| | ||||||||
Sbjct: 139 cccatattcgttttctaggctctcatattc 110



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 66/81 (81%)
 Strand = Plus / Minus

                                                                       
Query: 448 tccatattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctga 507
           |||||||||||||||| | | || ||||| | | ||| || || |||||||||  |||||
Sbjct: 160 tccatattcgtcctctcgcggcccatattcgttttctaggctctcatattcctgctctga 101

                                
Query: 508 gtctttctctaaagtcctata 528
            |||| ||||| |||||||||
Sbjct: 100 ttcttcctctagagtcctata 80



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| | ||||| |||||||||||||
Sbjct: 307 ctctgggctcccatattcttcctctgagtctt 276



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| || |||||||||| | || |||||||||||||
Sbjct: 296 catattcttcctctgagtctttctctagagtcctatattc 257



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 626 tcttctanggtttcatattcgtc 648
           ||||||| |||||||||||||||
Sbjct: 234 tcttctagggtttcatattcgtc 212
to top
>gb|U95129.1|PCU95129 Pentaschistis curvifolia RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 477

 Score =  139 bits (70), Expect = 1e-29
 Identities = 157/186 (84%)
 Strand = Plus / Minus

                                                                       
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcc 470
           |||| |||||||| || ||| ||||||| |||| | |||||||||| |||||| ||||| 
Sbjct: 373 ggctcccatattcttcctctaagtcttcctctagaattccatattcatcctctcgggtct 314

                                                                       
Query: 471 tatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||| | |||||||| |||||||||| || |||||||||||||||| |||||||||||
Sbjct: 313 tatattcgttctctgggctcccatattcttcctctgagtctttctctagagtcctatatt 254

                                                                       
Query: 531 cgttctctgggttcccatatttgttttctgggctcccatattcgttttctagggtttcat 590
           ||| |||| || ||||||||| || |||| || |  ||||||||| ||||| || | |||
Sbjct: 253 cgtcctctaggatcccatattcgtcttctagggtttcatattcgtcttctaaggctccat 194

                 
Query: 591 attcgt 596
           ||||||
Sbjct: 193 attcgt 188



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 60/66 (90%)
 Strand = Plus / Minus

                                                                       
Query: 324 cttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtac 383
           |||||||||||||  | |||||||||||||||||||| ||||||||||| |||||||| |
Sbjct: 460 cttcctctgggcttccatattcgtcctctgagtcttcctctgagtcttcttctaaagtcc 401

                 
Query: 384 catatt 389
           ||||||
Sbjct: 400 catatt 395



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 79/93 (84%), Gaps = 1/93 (1%)
 Strand = Plus / Minus

                                                                       
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
           ||||||| || |||||||||||||||||| | ||  ||||| || ||||| | |||||||
Sbjct: 167 tcttctatggcttcatattcgtcctctcgcggcccatattc-gttttctaggctctcata 109

                                            
Query: 686 ttcctcttctgagtcttccgctcgagtcctata 718
           |||||  ||||| |||||| |||||||||||||
Sbjct: 108 ttcctgctctgattcttcctctcgagtcctata 76



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                               
Query: 428 tctgagtcttcttctaaagttccatattcgtcctct 463
           |||||||||||||||||||| |||||||||| ||||
Sbjct: 422 tctgagtcttcttctaaagtcccatattcgttctct 387



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 503 tctgagtctttctctaaagtcctatattcgttctctg 539
           ||||||||||  |||||||||| ||||||||||||||
Sbjct: 422 tctgagtcttcttctaaagtcccatattcgttctctg 386



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 56/67 (83%)
 Strand = Plus / Minus

                                                                       
Query: 410 gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtc 469
           ||||| |||||||| || ||||||||||  |||| ||| | ||||||||||||| || ||
Sbjct: 299 gggctcccatattcttcctctgagtctttctctagagtcctatattcgtcctctaggatc 240

                  
Query: 470 ctatatt 476
           | |||||
Sbjct: 239 ccatatt 233



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 565 cccatattcgttttctagggtttcatattc 594
           ||||||||||||||||||| | ||||||||
Sbjct: 135 cccatattcgttttctaggctctcatattc 106



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| ||||||||||| |||||||||||
Sbjct: 452 gggcttccatattcgtcctctgagtcttc 424



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| | ||||| |||||||||||||
Sbjct: 303 ctctgggctcccatattcttcctctgagtctt 272



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| || |||||||||| | || |||||||||||||
Sbjct: 292 catattcttcctctgagtctttctctagagtcctatattc 253



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 626 tcttctanggtttcatattcgtc 648
           ||||||| |||||||||||||||
Sbjct: 230 tcttctagggtttcatattcgtc 208



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 565 cccatattcgttttctagggtttcatattcgt 596
           ||||||||||| ||||| || |||||||||||
Sbjct: 177 cccatattcgtcttctatggcttcatattcgt 146
to top
>gb|U95361.1|U95361 Plinthanthesis paradoxa RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 474

 Score =  137 bits (69), Expect = 6e-29
 Identities = 129/149 (86%)
 Strand = Plus / Minus

                                                                       
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcc 470
           |||| |||||||| |||||| ||||||| |||| | ||||||||||||||||| ||||| 
Sbjct: 384 ggctcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggtct 325

                                                                       
Query: 471 tatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||| | |||| ||| |||||||||| || |||||||||||||||| |||||||||||
Sbjct: 324 tatattggttctcagggctcccatattcttcctctgagtctttctctagagtcctatatt 265

                                        
Query: 531 cgttctctgggttcccatatttgttttct 559
           ||| |||| || |||| ||||||| ||||
Sbjct: 264 cgtcctctaggatcccgtatttgtcttct 236



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 63/69 (91%)
 Strand = Plus / Minus

                                                                       
Query: 321 aatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaag 380
           ||||||||||||||||| | |||||||||||||||||||| ||||||||||| |||||| 
Sbjct: 474 aatcttcctctgggctcccatattcgtcctctgagtcttcctctgagtcttcttctaaaa 415

                    
Query: 381 taccatatt 389
           | |||||||
Sbjct: 414 tcccatatt 406



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 72/81 (88%), Gaps = 1/81 (1%)
 Strand = Plus / Minus

                                                                       
Query: 638 tcatattcgtcctctcgggtcctgtattccgtgttctanggtctcatattcctcttctga 697
           |||||||| |||||||||||| | ||||| || ||||| | |||||||||| ||||||||
Sbjct: 145 tcatattcttcctctcgggtcttatattc-gtcttctaggctctcatattcttcttctga 87

                                
Query: 698 gtcttccgctcgagtcctata 718
           ||||||| |||||||||||||
Sbjct: 86  gtcttcctctcgagtcctata 66



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 54/63 (85%), Gaps = 3/63 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |   ||||||  ||||||||||||||| ||||||
Sbjct: 226 tattcgtcctctaggatcccatattca---tcttctcgggtttcatattcgtcttctcgg 170

              
Query: 656 gtc 658
           |||
Sbjct: 169 gtc 167



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| |||||| |||||| ||||| | | | |||||||| |||| || ||  ||
Sbjct: 381 tcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggtcttat 322

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| || ||||||||||||||
Sbjct: 321 attggttctcagggctcccatattc 297



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 428 tctgagtcttcttctaaagttccatattcgtcctct 463
           |||||||||||||||||| | |||||||||| ||||
Sbjct: 433 tctgagtcttcttctaaaatcccatattcgttctct 398



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 626 tcttctanggtttcatattcgtcctct 652
           ||||||| |||||||||||||||||||
Sbjct: 241 tcttctagggtttcatattcgtcctct 215



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 65/79 (82%)
 Strand = Plus / Minus

                                                                       
Query: 450 catattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgagt 509
           ||||||| |||||| ||||| |||||| |   ||| || || ||||||| ||||||||||
Sbjct: 144 catattcttcctctcgggtcttatattcgtcttctaggctctcatattcttcttctgagt 85

                              
Query: 510 ctttctctaaagtcctata 528
           ||| ||||  |||||||||
Sbjct: 84  cttcctctcgagtcctata 66



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                      
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           ||||||| |||||||||||||| |||  ||| | ||| || |||||| |||||||||||
Sbjct: 102 catattcttcttctgagtcttcctctcgagtcctatactcttcctctagggtcctatat 44



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                 
Query: 410 gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctct 463
           ||||| |||||||| || ||||||||||  |||| ||| | |||||||||||||
Sbjct: 310 gggctcccatattcttcctctgagtctttctctagagtcctatattcgtcctct 257



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| ||||||||||| |||||||||||
Sbjct: 463 gggctcccatattcgtcctctgagtcttc 435



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 503 tctgagtctttctctaaagtcctatattcgttctctg 539
           ||||||||||  |||||| ||| ||||||||||||||
Sbjct: 433 tctgagtcttcttctaaaatcccatattcgttctctg 397



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | |||| |||||||||||||||
Sbjct: 210 tcccatattcatcttctcgggtttcatattcgt 178



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 356 tcttcttctgagtcttcctct 376
           |||||||||||||||||||||
Sbjct: 97  tcttcttctgagtcttcctct 77



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 345 catattcgtcctctcgggtc 326



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| || |||||||||| | || |||||||||||||
Sbjct: 303 catattcttcctctgagtctttctctagagtcctatattc 264
to top
>gb|U95126.1|NMU95126 Notochloe microdon RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 476

 Score =  137 bits (69), Expect = 6e-29
 Identities = 129/149 (86%)
 Strand = Plus / Minus

                                                                       
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcc 470
           |||| |||||||| |||||| ||||||| |||| | ||||||||||||||||| ||||| 
Sbjct: 388 ggctcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggtct 329

                                                                       
Query: 471 tatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||| | |||| ||| |||||||||| || |||||||||||||||| |||||||||||
Sbjct: 328 tatattggttctcagggctcccatattcttcctctgagtctttctctagagtcctatatt 269

                                        
Query: 531 cgttctctgggttcccatatttgttttct 559
           ||| |||| || |||| ||||||| ||||
Sbjct: 268 cgtcctctaggatcccgtatttgtcttct 240



 Score = 93.7 bits (47), Expect = 8e-16
 Identities = 62/67 (92%)
 Strand = Plus / Minus

                                                                       
Query: 323 tcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagta 382
           ||||||||||||||| | |||||||||||||||||||| ||||||||||| |||||||| 
Sbjct: 476 tcttcctctgggctcccatattcgtcctctgagtcttcctctgagtcttcttctaaagtc 417

                  
Query: 383 ccatatt 389
           |||||||
Sbjct: 416 ccatatt 410



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 71/81 (87%), Gaps = 1/81 (1%)
 Strand = Plus / Minus

                                                                       
Query: 638 tcatattcgtcctctcgggtcctgtattccgtgttctanggtctcatattcctcttctga 697
           |||||||| |||||||||||| | ||||| || ||||| | |||||||||| ||||||||
Sbjct: 149 tcatattcttcctctcgggtcttatattc-gtcttctaggctctcatattcttcttctga 91

                                
Query: 698 gtcttccgctcgagtcctata 718
           ||||||  |||||||||||||
Sbjct: 90  gtcttcttctcgagtcctata 70



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                               
Query: 428 tctgagtcttcttctaaagttccatattcgtcctct 463
           |||||||||||||||||||| |||||||||| ||||
Sbjct: 437 tctgagtcttcttctaaagtcccatattcgttctct 402



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                      
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           ||||||| ||||||||||||||||||  ||| | ||| || |||||| |||||||||||
Sbjct: 106 catattcttcttctgagtcttcttctcgagtcctatactcttcctctagggtcctatat 48



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 54/63 (85%), Gaps = 3/63 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |   ||||||  ||||||||||||||| ||||||
Sbjct: 230 tattcgtcctctaggatcccatattca---tcttctcgggtttcatattcgtcttctcgg 174

              
Query: 656 gtc 658
           |||
Sbjct: 173 gtc 171



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 503 tctgagtctttctctaaagtcctatattcgttctctg 539
           ||||||||||  |||||||||| ||||||||||||||
Sbjct: 437 tctgagtcttcttctaaagtcccatattcgttctctg 401



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| |||||| |||||| ||||| | | | |||||||| |||| || ||  ||
Sbjct: 385 tcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggtcttat 326

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| || ||||||||||||||
Sbjct: 325 attggttctcagggctcccatattc 301



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 626 tcttctanggtttcatattcgtcctct 652
           ||||||| |||||||||||||||||||
Sbjct: 245 tcttctagggtttcatattcgtcctct 219



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                 
Query: 410 gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctct 463
           ||||| |||||||| || ||||||||||  |||| ||| | |||||||||||||
Sbjct: 314 gggctcccatattcttcctctgagtctttctctagagtcctatattcgtcctct 261



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| ||||||||||| |||||||||||
Sbjct: 467 gggctcccatattcgtcctctgagtcttc 439



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | |||| |||||||||||||||
Sbjct: 214 tcccatattcatcttctcgggtttcatattcgt 182



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 349 catattcgtcctctcgggtc 330



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| || |||||||||| | || |||||||||||||
Sbjct: 307 catattcttcctctgagtctttctctagagtcctatattc 268



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 333 ggctctcgtattcgtcctctgagtcttcttct 364
           ||||||| ||||| || |||||||||||||||
Sbjct: 112 ggctctcatattcttcttctgagtcttcttct 81
to top
>gb|U92701.1|U92701 Chionochloa macra RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 507

 Score =  137 bits (69), Expect = 6e-29
 Identities = 123/141 (87%)
 Strand = Plus / Minus

                                                                       
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcc 470
           |||| |||||||| |||||| ||||||| |||| | ||||||||||||||||| ||||  
Sbjct: 398 ggctcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggttt 339

                                                                       
Query: 471 tatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||| | |||||||| |||||||||| || |||||||||||||||| |||||||||||
Sbjct: 338 tatattggttctctgggctcccatattcttcctctgagtctttctctagagtcctatatt 279

                                
Query: 531 cgttctctgggttcccatatt 551
           ||| |||| || |||||||||
Sbjct: 278 cgtcctctaggatcccatatt 258



 Score =  103 bits (52), Expect = 8e-19
 Identities = 70/76 (92%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           ||||||||||||||||||||| || | |||||||||||||||||||| ||||||||||| 
Sbjct: 495 aagatggaatcttcctctgggttcccatattcgtcctctgagtcttcctctgagtcttct 436

                           
Query: 374 tctaaagtaccatatt 389
           |||||||| |||||||
Sbjct: 435 tctaaagtcccatatt 420



 Score = 93.7 bits (47), Expect = 8e-16
 Identities = 82/93 (88%), Gaps = 1/93 (1%)
 Strand = Plus / Minus

                                                                       
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
           ||||||| ||||||||||||||||||||||||| | |||| | | ||||| | |||||||
Sbjct: 171 tcttctagggtttcatattcgtcctctcgggtcttatatt-catcttctaggctctcata 113

                                            
Query: 686 ttcctcttctgagtcttccgctcgagtcctata 718
           ||| || |||||||||||| |||||||||||||
Sbjct: 112 ttcttcctctgagtcttcctctcgagtcctata 80



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 103/125 (82%), Gaps = 10/125 (8%)
 Strand = Plus / Minus

                                                                       
Query: 564 tcccatattcgttttctagggtttcatattcgtattcgtcttctaggattccatatttag 623
           |||||||||||| |||||||||||||      |||||||| |||||||| ||||||| | 
Sbjct: 266 tcccatattcgtcttctagggtttca------tattcgtcctctaggatcccatattca- 214

                                                                       
Query: 624 attcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctca 683
             ||||||  ||||||||||||||||||| | ||||| |||| ||| ||||| ||| |||
Sbjct: 213 --tcttctcgggtttcatattcgtcctctagagtcctatatt-cgtcttctagggtttca 157

                
Query: 684 tattc 688
           |||||
Sbjct: 156 tattc 152



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                               
Query: 428 tctgagtcttcttctaaagttccatattcgtcctct 463
           |||||||||||||||||||| |||||||||| ||||
Sbjct: 447 tctgagtcttcttctaaagtcccatattcgttctct 412



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 481 ctctgggttcccatattcctcttctgagtctttctct 517
           |||||||||||||||||| || |||||||||| ||||
Sbjct: 481 ctctgggttcccatattcgtcctctgagtcttcctct 445



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 503 tctgagtctttctctaaagtcctatattcgttctctg 539
           ||||||||||  |||||||||| ||||||||||||||
Sbjct: 447 tctgagtcttcttctaaagtcccatattcgttctctg 411



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| |||||| |||||| ||||| | | | |||||||| |||| || |   ||
Sbjct: 395 tcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggttttat 336

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| |||||||||||||||||
Sbjct: 335 attggttctctgggctcccatattc 311



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 568 atattcgttttctagggtttcatattcgt 596
           |||||||| ||||||||||||||||||||
Sbjct: 178 atattcgtcttctagggtttcatattcgt 150



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 56/67 (83%)
 Strand = Plus / Minus

                                                                       
Query: 410 gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtc 469
           ||||| |||||||| || ||||||||||  |||| ||| | ||||||||||||| || ||
Sbjct: 324 gggctcccatattcttcctctgagtctttctctagagtcctatattcgtcctctaggatc 265

                  
Query: 470 ctatatt 476
           | |||||
Sbjct: 264 ccatatt 258



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| | ||||| |||||||||||||
Sbjct: 328 ctctgggctcccatattcttcctctgagtctt 297



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| || |||||||||| | || |||||||||||||
Sbjct: 317 catattcttcctctgagtctttctctagagtcctatattc 278



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||  ||| |||||||||||||| ||||| ||||||
Sbjct: 171 tcttctagggtttcatattcgtcctctcgggtcttatatt 132



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 333 ggctctcgtattcgtcctctgagtcttc 360
           ||||||| ||||| ||||||||||||||
Sbjct: 122 ggctctcatattcttcctctgagtcttc 95
to top
>gb|AY174493.1| Paspalum malacophyllum DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 545

 Score =  135 bits (68), Expect = 2e-28
 Identities = 119/136 (87%)
 Strand = Plus / Minus

                                                                       
Query: 416 ccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           |||||||| |||||||||||||| |||| | ||||||||||||||||| ||||| |||||
Sbjct: 398 ccatattcttcttctgagtcttcctctagacttccatattcgtcctctcgggtcttatat 339

                                                                       
Query: 476 ttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttc 535
           | | |||||||| |||| ||||| || |||||||||||||||| ||||||||||||||  
Sbjct: 338 tcgttctctgggctcccgtattcttcctctgagtctttctctagagtcctatattcgtcg 279

                           
Query: 536 tctgggttcccatatt 551
           ||| || |||||||||
Sbjct: 278 tctaggatcccatatt 263



 Score =  107 bits (54), Expect = 5e-20
 Identities = 95/111 (85%)
 Strand = Plus / Minus

                                                                       
Query: 279 ttgttcctcgatgctcaatcaaaccctcnnnnnnnaagatggaatcttcctctgggctct 338
           ||||||||||||||||||| ||||||||       ||||| ||||||||||| |||||| 
Sbjct: 535 ttgttcctcgatgctcaataaaaccctctttctttaagatagaatcttcctccgggctcc 476

                                                              
Query: 339 cgtattcgtcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           | |||||||| ||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 475 catattcgtcttctgagtcttcctctgagtcttcttctaaagtcccatatt 425



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 104/123 (84%), Gaps = 4/123 (3%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |   ||||||| ||||||||||||||||||| | 
Sbjct: 287 tattcgtcgtctaggatcccatattca---tcttctagggtttcatattcgtcctctaga 231

                                                                       
Query: 656 gtcctgtattccgtgttctanggtctcatattcctcttctgagtcttccgctcgagtcct 715
           ||||| |||| ||| ||||| | | ||||||||  | |||||||||||| ||||||||||
Sbjct: 230 gtcctatatt-cgtcttctaggatttcatattcgccctctgagtcttcctctcgagtcct 172

              
Query: 716 ata 718
           |||
Sbjct: 171 ata 169



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 71/85 (83%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| ||||||||||||| ||||| | | | |||||||| |||| || ||  ||
Sbjct: 400 tcccatattcttcttctgagtcttcctctagacttccatattcgtcctctcgggtcttat 341

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| ||||||||||| |||||
Sbjct: 340 attcgttctctgggctcccgtattc 316



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| |||||||||||||||||||||||
Sbjct: 482 gggctcccatattcgtcttctgagtcttc 454



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 452 tctgagtcttcttctaaagtcccatattc 424



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 271 tcccatattcatcttctagggtttcatattcgt 239



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| ||||||| |||||||||||||
Sbjct: 333 ctctgggctcccgtattcttcctctgagtctt 302



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 356 tcttcttctgagtcttcctcta 377
           ||||||||||||||||||||||
Sbjct: 392 tcttcttctgagtcttcctcta 371



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 489 tcccatattcctcttctgagtctttctct 517
           |||||||||| ||||||||||||| ||||
Sbjct: 478 tcccatattcgtcttctgagtcttcctct 450



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 364 catattcgtcctctcgggtc 345



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 260 tcttctagggtttcatattcgtcctctagagtcctatatt 221



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 568 atattcgttttctagggtttcatattcg 595
           |||||||| ||||||| |||||||||||
Sbjct: 225 atattcgtcttctaggatttcatattcg 198
to top
>gb|AY174492.1| Paspalum conspersum DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 497

 Score =  135 bits (68), Expect = 2e-28
 Identities = 119/136 (87%)
 Strand = Plus / Minus

                                                                       
Query: 416 ccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           |||||||| |||||||||||||| |||| | ||||||||||||||||| ||||| |||||
Sbjct: 363 ccatattcttcttctgagtcttcctctagacttccatattcgtcctctcgggtcttatat 304

                                                                       
Query: 476 ttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttc 535
           | | |||||||| |||| ||||| || |||||||||||||||| ||||||||||||||  
Sbjct: 303 tcgttctctgggctcccgtattcttcctctgagtctttctctagagtcctatattcgtcg 244

                           
Query: 536 tctgggttcccatatt 551
           ||| || |||||||||
Sbjct: 243 tctaggatcccatatt 228



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 91/108 (84%)
 Strand = Plus / Minus

                                                                       
Query: 282 ttcctcgatgctcaatcaaaccctcnnnnnnnaagatggaatcttcctctgggctctcgt 341
           |||||| ||||||||| ||||||||       ||||| ||||||||||| |||||| | |
Sbjct: 497 ttcctcnatgctcaataaaaccctctttctttaagatagaatcttcctccgggctcccat 438

                                                           
Query: 342 attcgtcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           ||||||| ||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 437 attcgtcttctgagtcttcctctgagtcttcttctaaagtcccatatt 390



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 61/71 (85%), Gaps = 3/71 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |   ||||||| ||||||||||||||||||| | 
Sbjct: 252 tattcgtcgtctaggatcccatattca---tcttctagggtttcatattcgtcctctaga 196

                      
Query: 656 gtcctgtattc 666
           ||||| |||||
Sbjct: 195 gtcctatattc 185



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||| | |||||||| || ||||||| || |||||||||| |||| 
Sbjct: 155 cctctcgggtcctatattcgttctctgggctctcatattcatcctctgagtcttcctctc 96

                     
Query: 519 aagtcctata 528
            |||||||||
Sbjct: 95  gagtcctata 86



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 71/85 (83%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| ||||||||||||| ||||| | | | |||||||| |||| || ||  ||
Sbjct: 365 tcccatattcttcttctgagtcttcctctagacttccatattcgtcctctcgggtcttat 306

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| ||||||||||| |||||
Sbjct: 305 attcgttctctgggctcccgtattc 281



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 61/71 (85%), Gaps = 1/71 (1%)
 Strand = Plus / Minus

                                                                       
Query: 648 cctctcgggtcctgtattccgtgttctanggtctcatattcctcttctgagtcttccgct 707
           ||||||||||||| |||| |||  |||  | |||||||||| || |||||||||||| ||
Sbjct: 155 cctctcgggtcctatatt-cgttctctgggctctcatattcatcctctgagtcttcctct 97

                      
Query: 708 cgagtcctata 718
           |||||||||||
Sbjct: 96  cgagtcctata 86



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| |||||||||||||||||||||||
Sbjct: 447 gggctcccatattcgtcttctgagtcttc 419



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 417 tctgagtcttcttctaaagtcccatattc 389



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 236 tcccatattcatcttctagggtttcatattcgt 204



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| ||||| ||||||||||||||
Sbjct: 133 ctctgggctctcatattcatcctctgagtcttc 101



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| ||||||| |||||||||||||
Sbjct: 298 ctctgggctcccgtattcttcctctgagtctt 267



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 521 gtcctatattcgttctctgggttcccatatt 551
           ||||||||||||||||||||| || ||||||
Sbjct: 147 gtcctatattcgttctctgggctctcatatt 117



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 356 tcttcttctgagtcttcctcta 377
           ||||||||||||||||||||||
Sbjct: 357 tcttcttctgagtcttcctcta 336



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 489 tcccatattcctcttctgagtctttctct 517
           |||||||||| ||||||||||||| ||||
Sbjct: 443 tcccatattcgtcttctgagtcttcctct 415



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 596 tattcgtcttctaggattccatatt 620
           |||||||||||||||||| ||||||
Sbjct: 189 tattcgtcttctaggatttcatatt 165



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 329 catattcgtcctctcgggtc 310



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 225 tcttctagggtttcatattcgtcctctagagtcctatatt 186



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 568 atattcgttttctagggtttcatattcg 595
           |||||||| ||||||| |||||||||||
Sbjct: 190 atattcgtcttctaggatttcatattcg 163
to top
>gb|AY174472.1| Anthaenantiopsis rojasiana DNA-directed RNA polymerase beta'
           subunit 2 (rpoC2) gene, partial cds; chloroplast gene
           for chloroplast product
          Length = 551

 Score =  135 bits (68), Expect = 2e-28
 Identities = 119/136 (87%)
 Strand = Plus / Minus

                                                                       
Query: 416 ccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           |||||||| |||||||||||||| |||| | ||||||||||||||||| ||||| |||||
Sbjct: 467 ccatattcttcttctgagtcttcctctagacttccatattcgtcctctcgggtcttatat 408

                                                                       
Query: 476 ttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttc 535
           | | |||||||| |||| ||||| || |||||||||||||||| ||||||||||||||  
Sbjct: 407 tcgttctctgggctcccgtattcttcctctgagtctttctctagagtcctatattcgtcg 348

                           
Query: 536 tctgggttcccatatt 551
           ||| || |||||||||
Sbjct: 347 tctaggatcccatatt 332



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 68/76 (89%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           ||||| ||||||||||| |||||| | |||||||| ||||||||||| ||||||||||| 
Sbjct: 536 aagatagaatcttcctccgggctcccatattcgtcttctgagtcttcctctgagtcttct 477

                           
Query: 374 tctaaagtaccatatt 389
           |||||||| |||||||
Sbjct: 476 tctaaagtcccatatt 461



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 61/71 (85%), Gaps = 3/71 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |   ||||||| ||||||||||||||||||| | 
Sbjct: 356 tattcgtcgtctaggatcccatattca---tcttctagggtttcatattcgtcctctaga 300

                      
Query: 656 gtcctgtattc 666
           ||||| |||||
Sbjct: 299 gtcctatattc 289



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 71/85 (83%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| ||||||||||||| ||||| | | | |||||||| |||| || ||  ||
Sbjct: 469 tcccatattcttcttctgagtcttcctctagacttccatattcgtcctctcgggtcttat 410

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| ||||||||||| |||||
Sbjct: 409 attcgttctctgggctcccgtattc 385



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           |||||||||| || |||||||||||| |||||||||||||
Sbjct: 229 tctcatattcatcctctgagtcttcctctcgagtcctata 190



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||| | |||| ||| || ||||||| || |||||||||| |||| 
Sbjct: 259 cctctcgggtcctatattcgttctccgggctctcatattcatcctctgagtcttcctctc 200

                     
Query: 519 aagtcctata 528
            |||||||||
Sbjct: 199 gagtcctata 190



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| |||||||||||||||||||||||
Sbjct: 518 gggctcccatattcgtcttctgagtcttc 490



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 488 tctgagtcttcttctaaagtcccatattc 460



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 340 tcccatattcatcttctagggtttcatattcgt 308



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| ||||||| |||||||||||||
Sbjct: 402 ctctgggctcccgtattcttcctctgagtctt 371



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 356 tcttcttctgagtcttcctcta 377
           ||||||||||||||||||||||
Sbjct: 461 tcttcttctgagtcttcctcta 440



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 489 tcccatattcctcttctgagtctttctct 517
           |||||||||| ||||||||||||| ||||
Sbjct: 514 tcccatattcgtcttctgagtcttcctct 486



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 596 tattcgtcttctaggattccatatt 620
           |||||||||||||||||| ||||||
Sbjct: 293 tattcgtcttctaggatttcatatt 269



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 332 gggctctcgtattcgtcctctgagtcttc 360
           |||||||| ||||| ||||||||||||||
Sbjct: 233 gggctctcatattcatcctctgagtcttc 205



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 433 catattcgtcctctcgggtc 414



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 329 tcttctagggtttcatattcgtcctctagagtcctatatt 290



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 568 atattcgttttctagggtttcatattcg 595
           |||||||| ||||||| |||||||||||
Sbjct: 294 atattcgtcttctaggatttcatattcg 267
to top
>gb|AF372211.1| Thrasya petrosa DNA-directed RNA polymerase beta' subunit 2 (rpoC2)
           gene, partial cds; chloroplast gene for chloroplast
           product
          Length = 467

 Score =  135 bits (68), Expect = 2e-28
 Identities = 119/136 (87%)
 Strand = Plus / Minus

                                                                       
Query: 416 ccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           |||||||| |||||||||||||| |||| | ||||||||||||||||| ||||| |||||
Sbjct: 353 ccatattcttcttctgagtcttcctctagacttccatattcgtcctctcgggtcttatat 294

                                                                       
Query: 476 ttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttc 535
           | | |||||||| |||| ||||| || |||||||||||||||| ||||||||||||||  
Sbjct: 293 tcgttctctgggctcccgtattcttcctctgagtctttctctagagtcctatattcgtcg 234

                           
Query: 536 tctgggttcccatatt 551
           ||| || |||||||||
Sbjct: 233 tctaggatcccatatt 218



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 68/76 (89%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           ||||| ||||||||||| |||||| | |||||||| ||||||||||| ||||||||||| 
Sbjct: 455 aagatagaatcttcctccgggctcccatattcgtcttctgagtcttcctctgagtcttct 396

                           
Query: 374 tctaaagtaccatatt 389
           |||||||| |||||||
Sbjct: 395 tctaaagtcccatatt 380



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 61/71 (85%), Gaps = 3/71 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |   ||||||| ||||||||||||||||||| | 
Sbjct: 242 tattcgtcgtctaggatcccatattca---tcttctagggtttcatattcgtcctctaga 186

                      
Query: 656 gtcctgtattc 666
           ||||| |||||
Sbjct: 185 gtcctatattc 175



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||| | |||||||| || ||||||| || |||||||||| |||| 
Sbjct: 145 cctctcgggtcctatattcgttctctgggctctcatattcatcctctgagtcttcctctc 86

                     
Query: 519 aagtcctata 528
            |||||||||
Sbjct: 85  gagtcctata 76



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 71/85 (83%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| ||||||||||||| ||||| | | | |||||||| |||| || ||  ||
Sbjct: 355 tcccatattcttcttctgagtcttcctctagacttccatattcgtcctctcgggtcttat 296

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| ||||||||||| |||||
Sbjct: 295 attcgttctctgggctcccgtattc 271



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 61/71 (85%), Gaps = 1/71 (1%)
 Strand = Plus / Minus

                                                                       
Query: 648 cctctcgggtcctgtattccgtgttctanggtctcatattcctcttctgagtcttccgct 707
           ||||||||||||| |||| |||  |||  | |||||||||| || |||||||||||| ||
Sbjct: 145 cctctcgggtcctatatt-cgttctctgggctctcatattcatcctctgagtcttcctct 87

                      
Query: 708 cgagtcctata 718
           |||||||||||
Sbjct: 86  cgagtcctata 76



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| |||||||||||||||||||||||
Sbjct: 437 gggctcccatattcgtcttctgagtcttc 409



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 407 tctgagtcttcttctaaagtcccatattc 379



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 226 tcccatattcatcttctagggtttcatattcgt 194



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| ||||| ||||||||||||||
Sbjct: 123 ctctgggctctcatattcatcctctgagtcttc 91



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| ||||||| |||||||||||||
Sbjct: 288 ctctgggctcccgtattcttcctctgagtctt 257



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 521 gtcctatattcgttctctgggttcccatatt 551
           ||||||||||||||||||||| || ||||||
Sbjct: 137 gtcctatattcgttctctgggctctcatatt 107



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 356 tcttcttctgagtcttcctcta 377
           ||||||||||||||||||||||
Sbjct: 347 tcttcttctgagtcttcctcta 326



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 489 tcccatattcctcttctgagtctttctct 517
           |||||||||| ||||||||||||| ||||
Sbjct: 433 tcccatattcgtcttctgagtcttcctct 405



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 596 tattcgtcttctaggattccatatt 620
           |||||||||||||||||| ||||||
Sbjct: 179 tattcgtcttctaggatttcatatt 155



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 319 catattcgtcctctcgggtc 300



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 215 tcttctagggtttcatattcgtcctctagagtcctatatt 176



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 568 atattcgttttctagggtttcatattcg 595
           |||||||| ||||||| |||||||||||
Sbjct: 180 atattcgtcttctaggatttcatattcg 153
to top
>gb|AF372209.1| Tatianyx arnacites DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 539

 Score =  135 bits (68), Expect = 2e-28
 Identities = 119/136 (87%)
 Strand = Plus / Minus

                                                                       
Query: 416 ccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           |||||||| |||||||||||||| |||| |||||| |||||||||||| ||||| |||||
Sbjct: 422 ccatattcttcttctgagtcttcctctagagttccgtattcgtcctctcgggtcttatat 363

                                                                       
Query: 476 ttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttc 535
           | | ||||| || |||||||||| || |||| ||||||||||| |||||||||||||| |
Sbjct: 362 tcgttctctaggctcccatattcttcctctgtgtctttctctagagtcctatattcgtcc 303

                           
Query: 536 tctgggttcccatatt 551
           ||| || |||||||||
Sbjct: 302 tctaggatcccatatt 287



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 66/76 (86%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           ||||| ||||||||||| | |||| | ||||| || ||||||||||| ||||||||||| 
Sbjct: 524 aagatagaatcttcctccgagctcccatattcatcttctgagtcttcctctgagtcttct 465

                           
Query: 374 tctaaagtaccatatt 389
           |||||||| |||||||
Sbjct: 464 tctaaagtcccatatt 449



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           |||||||||| ||||||||||||||| |||||||||||||
Sbjct: 184 tctcatattcgtcttctgagtcttcctctcgagtcctata 145



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||| ||||| | |||||||| || ||||||| ||||||||||||| |||| 
Sbjct: 214 cctctcgggtccgatattcgttctctgggctctcatattcgtcttctgagtcttcctctc 155

                     
Query: 519 aagtcctata 528
            |||||||||
Sbjct: 154 gagtcctata 145



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 71/85 (83%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| ||||||||||||| ||||| ||| |  ||||||| |||| || ||  ||
Sbjct: 424 tcccatattcttcttctgagtcttcctctagagttccgtattcgtcctctcgggtcttat 365

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| ||| |||||||||||||
Sbjct: 364 attcgttctctaggctcccatattc 340



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 60/70 (85%), Gaps = 3/70 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |   ||||||| ||||||||||||||||||| | 
Sbjct: 311 tattcgtcctctaggatcccatattca---tcttctagggtttcatattcgtcctctaga 255

                     
Query: 656 gtcctgtatt 665
           ||||| ||||
Sbjct: 254 gtcctatatt 245



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 476 tctgagtcttcttctaaagtcccatattc 448



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 295 tcccatattcatcttctagggtttcatattcgt 263



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| |||||||| |||||||||||
Sbjct: 192 ctctgggctctcatattcgtcttctgagtcttc 160



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                       
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||||||||||||||||| |||  ||| | ||| || |||||| |||||| |||||
Sbjct: 181 catattcgtcttctgagtcttcctctcgagtcctatactcttcctctcgggtccaatatt 122



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 356 tcttcttctgagtcttcctcta 377
           ||||||||||||||||||||||
Sbjct: 416 tcttcttctgagtcttcctcta 395



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 67/81 (82%), Gaps = 1/81 (1%)
 Strand = Plus / Minus

                                                                       
Query: 641 tattcgtcctctcgggtcctgtattccgtgttctanggtctcatattcctcttctgagtc 700
           |||||||||||||||||| | |||| |||  |||| | || ||||||| || |||| |||
Sbjct: 386 tattcgtcctctcgggtcttatatt-cgttctctaggctcccatattcttcctctgtgtc 328

                                
Query: 701 ttccgctcgagtcctatattc 721
           || | || |||||||||||||
Sbjct: 327 tttctctagagtcctatattc 307



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 489 tcccatattcctcttctgagtctttctct 517
           |||||||||| ||||||||||||| ||||
Sbjct: 502 tcccatattcatcttctgagtcttcctct 474



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 284 tcttctagggtttcatattcgtcctctagagtcctatatt 245



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 521 gtcctatattcgttctctgggttcccatatttgttttctg 560
           |||| |||||||||||||||| || |||||| || |||||
Sbjct: 206 gtccgatattcgttctctgggctctcatattcgtcttctg 167
to top
>gb|AF372197.1| Paspalum quadrifarium DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 580

 Score =  135 bits (68), Expect = 2e-28
 Identities = 119/136 (87%)
 Strand = Plus / Minus

                                                                       
Query: 416 ccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           |||||||| |||||||||||||| |||| | ||||||||||||||||| ||||| |||||
Sbjct: 446 ccatattcttcttctgagtcttcctctagacttccatattcgtcctctcgggtcttatat 387

                                                                       
Query: 476 ttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttc 535
           | | |||||||| |||| ||||| || |||||||||||||||| ||||||||||||||  
Sbjct: 386 tcgttctctgggctcccgtattcttcctctgagtctttctctagagtcctatattcgtcg 327

                           
Query: 536 tctgggttcccatatt 551
           ||| || |||||||||
Sbjct: 326 tctaggatcccatatt 311



 Score =  101 bits (51), Expect = 3e-18
 Identities = 92/108 (85%)
 Strand = Plus / Minus

                                                                       
Query: 282 ttcctcgatgctcaatcaaaccctcnnnnnnnaagatggaatcttcctctgggctctcgt 341
           |||||||||||||||| ||||||||       ||||| ||||||||||| |||||| | |
Sbjct: 580 ttcctcgatgctcaataaaaccctctttctttaagatagaatcttcctccgggctcccat 521

                                                           
Query: 342 attcgtcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           ||||||| ||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 520 attcgtcttctgagtcttcctctgagtcttcttctaaagtcccatatt 473



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 61/71 (85%), Gaps = 3/71 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |   ||||||| ||||||||||||||||||| | 
Sbjct: 335 tattcgtcgtctaggatcccatattca---tcttctagggtttcatattcgtcctctaga 279

                      
Query: 656 gtcctgtattc 666
           ||||| |||||
Sbjct: 278 gtcctatattc 268



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||| | |||||||| || ||||||| || |||||||||| |||| 
Sbjct: 238 cctctcgggtcctatattcgttctctgggctctcatattcatcctctgagtcttcctctc 179

                     
Query: 519 aagtcctata 528
            |||||||||
Sbjct: 178 gagtcctata 169



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 71/85 (83%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| ||||||||||||| ||||| | | | |||||||| |||| || ||  ||
Sbjct: 448 tcccatattcttcttctgagtcttcctctagacttccatattcgtcctctcgggtcttat 389

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| ||||||||||| |||||
Sbjct: 388 attcgttctctgggctcccgtattc 364



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 61/71 (85%), Gaps = 1/71 (1%)
 Strand = Plus / Minus

                                                                       
Query: 648 cctctcgggtcctgtattccgtgttctanggtctcatattcctcttctgagtcttccgct 707
           ||||||||||||| |||| |||  |||  | |||||||||| || |||||||||||| ||
Sbjct: 238 cctctcgggtcctatatt-cgttctctgggctctcatattcatcctctgagtcttcctct 180

                      
Query: 708 cgagtcctata 718
           |||||||||||
Sbjct: 179 cgagtcctata 169



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| |||||||||||||||||||||||
Sbjct: 530 gggctcccatattcgtcttctgagtcttc 502



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 500 tctgagtcttcttctaaagtcccatattc 472



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 319 tcccatattcatcttctagggtttcatattcgt 287



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| ||||| ||||||||||||||
Sbjct: 216 ctctgggctctcatattcatcctctgagtcttc 184



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| ||||||| |||||||||||||
Sbjct: 381 ctctgggctcccgtattcttcctctgagtctt 350



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 521 gtcctatattcgttctctgggttcccatatt 551
           ||||||||||||||||||||| || ||||||
Sbjct: 230 gtcctatattcgttctctgggctctcatatt 200



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 356 tcttcttctgagtcttcctcta 377
           ||||||||||||||||||||||
Sbjct: 440 tcttcttctgagtcttcctcta 419



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 489 tcccatattcctcttctgagtctttctct 517
           |||||||||| ||||||||||||| ||||
Sbjct: 526 tcccatattcgtcttctgagtcttcctct 498



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 596 tattcgtcttctaggattccatatt 620
           |||||||||||||||||| ||||||
Sbjct: 272 tattcgtcttctaggatttcatatt 248



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 412 catattcgtcctctcgggtc 393



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 308 tcttctagggtttcatattcgtcctctagagtcctatatt 269



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 568 atattcgttttctagggtttcatattcg 595
           |||||||| ||||||| |||||||||||
Sbjct: 273 atattcgtcttctaggatttcatattcg 246
to top
>gb|AF372166.1| Chaetium bromoides DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 605

 Score =  133 bits (67), Expect = 9e-28
 Identities = 108/124 (87%)
 Strand = Plus / Minus

                                                                       
Query: 266 agactaaattcttttgttcctcgatgctcaatcaaaccctcnnnnnnnaagatggaatct 325
           |||||||||||||||||||||||||||||||| ||||||||       ||||||||||||
Sbjct: 605 agactaaattcttttgttcctcgatgctcaataaaaccctctttttttaagatggaatct 546

                                                                       
Query: 326 tcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtacca 385
           ||||| ||||||   |||||||| ||||||||||| ||||||||||| |||||||| |||
Sbjct: 545 tcctccgggctccgatattcgtcttctgagtcttcctctgagtcttcttctaaagtccca 486

               
Query: 386 tatt 389
           ||||
Sbjct: 485 tatt 482



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                            
Query: 503 tctgagtctttctctaaagtcctatattcgttctctgggttcccatatt 551
           |||||||||||||||| |||||||||||||| |||| || |||||||||
Sbjct: 338 tctgagtctttctctagagtcctatattcgtcctctaggatcccatatt 290



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                     
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||||||| ||||||||||||| ||||| |||||||||||
Sbjct: 457 tcccatattcttcttctgagtcttcctctagagtcctatatt 416



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                            
Query: 329 tctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctcta 377
           ||||||||| ||||||| |||||||||||||  |||||||||| |||||
Sbjct: 371 tctgggctcccgtattcttcctctgagtctttctctgagtctttctcta 323



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 60/70 (85%), Gaps = 3/70 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |   ||||||| ||||||||||||||||||| | 
Sbjct: 314 tattcgtcctctaggatcccatattca---tcttctagggtttcatattcgtcctctaga 258

                     
Query: 656 gtcctgtatt 665
           ||||| ||||
Sbjct: 257 gtcctatatt 248



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| ||||||||||||||||||||
Sbjct: 195 ctctgggctctcatattcgtcctctgagtcttc 163



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           |||||||||| || |||||||||||| |||||||||||||
Sbjct: 187 tctcatattcgtcctctgagtcttcctctcgagtcctata 148



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 682 catattcctcttctgagtcttccgctcgagtcctatatt 720
           ||||||| ||||||||||||||| || ||||||||||||
Sbjct: 454 catattcttcttctgagtcttcctctagagtcctatatt 416



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 509 tctgagtcttcttctaaagtcccatattc 481



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 298 tcccatattcatcttctagggtttcatattcgt 266



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 356 tcttcttctgagtcttcctctaaagtaccatattt 390
           |||||||||||||||||||||| ||| | ||||||
Sbjct: 449 tcttcttctgagtcttcctctagagtcctatattt 415



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatttg 478
           |||||||  ||| |||||||||||||| | ||||||||||||
Sbjct: 287 tcttctagggtttcatattcgtcctctagagtcctatatttg 246



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 418 atattcgtcttctgagtcttc 438
           |||||||||||||||||||||
Sbjct: 531 atattcgtcttctgagtcttc 511



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                
Query: 465 gggtcctatatttgctctctgggttcccatattcctcttctgagtctttctct 517
           ||||| |||||| | | |||||| |||| ||||| || |||||||||||||||
Sbjct: 388 gggtcttatattcgttttctgggctcccgtattcttcctctgagtctttctct 336



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 416 ccatattcgtcttctgagtcttcttcta 443
           |||||||| |||||||||||||| ||||
Sbjct: 455 ccatattcttcttctgagtcttcctcta 428
to top
>gb|AF372206.1| Streptostachys ramosa DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 502

 Score =  131 bits (66), Expect = 4e-27
 Identities = 117/134 (87%)
 Strand = Plus / Minus

                                                                       
Query: 418 atattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatattt 477
           |||||| |||||||||||||| |||| ||||||||||||||||||| ||||| |||||| 
Sbjct: 402 atattcttcttctgagtcttcctctagagttccatattcgtcctctcgggtcttatattc 343

                                                                       
Query: 478 gctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttctc 537
           | |||| ||| |||| ||||| || ||||| |||||||||| |||||||||||||| |||
Sbjct: 342 gttctcggggctcccgtattcttcctctgactctttctctagagtcctatattcgtcctc 283

                         
Query: 538 tgggttcccatatt 551
           | || |||||||||
Sbjct: 282 taggatcccatatt 269



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                       
Query: 320 gaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaa 379
           |||||||| || |||||| | ||||| || ||||||||||| ||||||||||| ||||||
Sbjct: 500 gaatcttcttccgggctcccatattcatcttctgagtcttcctctgagtcttcttctaaa 441

                    
Query: 380 gtaccatat 388
           || ||||||
Sbjct: 440 gtcccatat 432



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 61/71 (85%), Gaps = 3/71 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |   ||||||| ||||||||||||||||||| | 
Sbjct: 293 tattcgtcctctaggatcccatattca---tcttctagggtttcatattcgtcctctaga 237

                      
Query: 656 gtcctgtattc 666
           ||||| |||||
Sbjct: 236 gtcctatattc 226



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 356 tcttcttctgagtcttcctctaaagtaccatatt 389
           |||||||||||||||||||||| ||| |||||||
Sbjct: 398 tcttcttctgagtcttcctctagagttccatatt 365



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 67/81 (82%)
 Strand = Plus / Minus

                                                                       
Query: 493 atattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccatattt 552
           |||||| ||||||||||||| ||||| ||| | |||||||| |||| || ||  ||||| 
Sbjct: 402 atattcttcttctgagtcttcctctagagttccatattcgtcctctcgggtcttatattc 343

                                
Query: 553 gttttctgggctcccatattc 573
           ||| || |||||||| |||||
Sbjct: 342 gttctcggggctcccgtattc 322



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 277 tcccatattcatcttctagggtttcatattcgt 245



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           |||||||||| || ||||||| |||| |||||||||||||
Sbjct: 166 tctcatattcgtcctctgagtgttcctctcgagtcctata 127



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 428 tctgagtcttcttctaaagttccatat 454
           |||||||||||||||||||| ||||||
Sbjct: 458 tctgagtcttcttctaaagtcccatat 432



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 58/70 (82%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||| | |||| ||| || ||||||| || ||||||| || |||| 
Sbjct: 196 cctctcgggtcctatattcgttctcggggctctcatattcgtcctctgagtgttcctctc 137

                     
Query: 519 aagtcctata 528
            |||||||||
Sbjct: 136 gagtcctata 127



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| |||||||| ||||||||||||||
Sbjct: 488 gggctcccatattcatcttctgagtcttc 460



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 489 tcccatattcctcttctgagtctttctct 517
           |||||||||| ||||||||||||| ||||
Sbjct: 484 tcccatattcatcttctgagtcttcctct 456



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 596 tattcgtcttctaggattccatatt 620
           |||||||||||||||||| ||||||
Sbjct: 230 tattcgtcttctaggatttcatatt 206



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 332 gggctctcgtattcgtcctctgagt 356
           |||||||| ||||||||||||||||
Sbjct: 170 gggctctcatattcgtcctctgagt 146



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 370 catattcgtcctctcgggtc 351



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 266 tcttctagggtttcatattcgtcctctagagtcctatatt 227



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 568 atattcgttttctagggtttcatattcg 595
           |||||||| ||||||| |||||||||||
Sbjct: 231 atattcgtcttctaggatttcatattcg 204
to top
>gb|AF372187.1| Paspalum fimbriatum DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 431

 Score =  131 bits (66), Expect = 4e-27
 Identities = 118/136 (86%)
 Strand = Plus / Minus

                                                                       
Query: 416 ccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           |||||||| |||||||||||||| |||| | ||||||||||||||||| ||||| |||||
Sbjct: 356 ccatattcttcttctgagtcttcctctaracttccatattcgtcctctcgggtcttatat 297

                                                                       
Query: 476 ttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttc 535
           | | | |||||| |||| ||||| || |||||||||||||||| ||||||||||||||  
Sbjct: 296 tcgttttctgggctcccgtattcttcctctgagtctttctctagagtcctatattcgtcg 237

                           
Query: 536 tctgggttcccatatt 551
           ||| || |||||||||
Sbjct: 236 tctaggatcccatatt 221



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 72/85 (84%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| ||||||||||||| ||||| | | | |||||||| |||| || ||  ||
Sbjct: 358 tcccatattcttcttctgagtcttcctctaracttccatattcgtcctctcgggtcttat 299

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||||||||||||||| |||||
Sbjct: 298 attcgttttctgggctcccgtattc 274



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                            
Query: 341 tattcgtcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           |||||||| ||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 431 tattcgtcttctgagtcttcctctgagtcttcttctaaagtcccatatt 383



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||| | |||||||| || ||||||| || |||||||||| |||| 
Sbjct: 148 cctctcgggtcctatattcgttctctgggctctcatattcatcctctgagtcttcctctc 89

                     
Query: 519 aagtcctata 528
            |||||||||
Sbjct: 88  gagtcctata 79



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 50/57 (87%), Gaps = 3/57 (5%)
 Strand = Plus / Minus

                                                                    
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctct 652
           |||||||| |||||||| ||||||| |   ||||||| |||||||||||||||||||
Sbjct: 245 tattcgtcgtctaggatcccatattca---tcttctagggtttcatattcgtcctct 192



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 61/71 (85%), Gaps = 1/71 (1%)
 Strand = Plus / Minus

                                                                       
Query: 648 cctctcgggtcctgtattccgtgttctanggtctcatattcctcttctgagtcttccgct 707
           ||||||||||||| |||| |||  |||  | |||||||||| || |||||||||||| ||
Sbjct: 148 cctctcgggtcctatatt-cgttctctgggctctcatattcatcctctgagtcttcctct 90

                      
Query: 708 cgagtcctata 718
           |||||||||||
Sbjct: 89  cgagtcctata 79



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 410 tctgagtcttcttctaaagtcccatattc 382



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 229 tcccatattcatcttctagggtttcatattcgt 197



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| ||||| ||||||||||||||
Sbjct: 126 ctctgggctctcatattcatcctctgagtcttc 94



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 356 tcttcttctgagtcttcctctaaagtaccatatt 389
           |||||||||||||||||||||| | | |||||||
Sbjct: 350 tcttcttctgagtcttcctctaracttccatatt 317



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 69/83 (83%), Gaps = 1/83 (1%)
 Strand = Plus / Minus

                                                                       
Query: 639 catattcgtcctctcgggtcctgtattccgtgttctanggtctcatattcctcttctgag 698
           |||||||||||||||||||| | |||| ||| ||||  | || | ||||| || ||||||
Sbjct: 322 catattcgtcctctcgggtcttatatt-cgttttctgggctcccgtattcttcctctgag 264

                                  
Query: 699 tcttccgctcgagtcctatattc 721
           |||| | || |||||||||||||
Sbjct: 263 tctttctctagagtcctatattc 241



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 329 tctgggctctcgtattcgtcctctgagtctt 359
           ||||||||| ||||||| |||||||||||||
Sbjct: 290 tctgggctcccgtattcttcctctgagtctt 260



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 521 gtcctatattcgttctctgggttcccatatt 551
           ||||||||||||||||||||| || ||||||
Sbjct: 140 gtcctatattcgttctctgggctctcatatt 110



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 419 tattcgtcttctgagtcttc 438
           ||||||||||||||||||||
Sbjct: 431 tattcgtcttctgagtcttc 412
to top
>gb|AF372186.1| Paspalum scrobiculatum DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 457

 Score =  131 bits (66), Expect = 4e-27
 Identities = 118/136 (86%)
 Strand = Plus / Minus

                                                                       
Query: 416 ccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           |||||||| |||||||||||||| |||| | ||||||||||||| ||| ||||| |||||
Sbjct: 383 ccatattcttcttctgagtcttcctctaracttccatattcgtcttctsgggtcttatat 324

                                                                       
Query: 476 ttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttc 535
           | | |||||||| |||| ||||| || |||||||||||||||| ||||||||||||||  
Sbjct: 323 tcgttctctgggctcccgtattcttcctctgagtctttctctagagtcctatattcgtcg 264

                           
Query: 536 tctgggttcccatatt 551
           ||| || |||||||||
Sbjct: 263 tctaggatcccatatt 248



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| ||||||||||||| ||||| | | | ||||||||  ||| || ||  ||
Sbjct: 385 tcccatattcttcttctgagtcttcctctaracttccatattcgtcttctsgggtcttat 326

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| ||||||||||| |||||
Sbjct: 325 attcgttctctgggctcccgtattc 301



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 60/71 (84%), Gaps = 3/71 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |   ||||||| |||| |||||||||||||| | 
Sbjct: 272 tattcgtcgtctaggatcccatattca---tcttctagggttycatattcgtcctctaga 216

                      
Query: 656 gtcctgtattc 666
           ||||| |||||
Sbjct: 215 gtcctatattc 205



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 58/70 (82%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||| |  ||||||| ||  |||||| || |||||||||| |||| 
Sbjct: 175 cctctcgggtcctatattcgnnctctgggctctmatattcatcctctgagtcttcctctc 116

                     
Query: 519 aagtcctata 528
            |||||||||
Sbjct: 115 gagtcctata 106



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           ||| |||||| || |||||||||||| |||||||||||||
Sbjct: 145 tctmatattcatcctctgagtcttcctctcgagtcctata 106



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 356 tcttcttctgagtcttcctctaaagtaccatatt 389
           |||||||||||||||||||||| | | |||||||
Sbjct: 377 tcttcttctgagtcttcctctaracttccatatt 344



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| ||||||| |||||||||||||
Sbjct: 318 ctctgggctcccgtattcttcctctgagtctt 287



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||  ||||| ||||||||||||||
Sbjct: 153 ctctgggctctmatattcatcctctgagtcttc 121



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 245 tcttctagggttycatattcgtcctctagagtcctatatt 206



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 596 tattcgtcttctaggattccatatt 620
           |||||||||||||||||| ||||||
Sbjct: 209 tattcgtcttctaggatttcatatt 185



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 568 atattcgttttctagggtttcatattcg 595
           |||||||| ||||||| |||||||||||
Sbjct: 210 atattcgtcttctaggatttcatattcg 183
to top
>gb|U96308.1|SBU96308 Schismus barbatus RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 536

 Score =  131 bits (66), Expect = 4e-27
 Identities = 129/150 (86%)
 Strand = Plus / Minus

                                                                       
Query: 447 ttccatattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctg 506
           ||||||||||||||||||||||  |||||| | |||||||| |||||||||| |||||||
Sbjct: 379 ttccatattcgtcctcttgggttttatattggttctctgggctcccatattcttcttctg 320

                                                                       
Query: 507 agtctttctctaaagtcctatattcgttctctgggttcccatatttgttttctgggctcc 566
           |||||||||||| |||| ||||||| | |||| || |||| |||| || |||| || |  
Sbjct: 319 agtctttctctagagtcttatattcctcctctaggatcccgtattcgtcttctaggattt 260

                                         
Query: 567 catattcgttttctagggtttcatattcgt 596
           ||||||||| |||||| |||||||||||||
Sbjct: 259 catattcgtcttctagagtttcatattcgt 230



 Score = 93.7 bits (47), Expect = 8e-16
 Identities = 59/63 (93%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           |||| ||||||||||||||||||| | |||||||||||||||||||| ||||||||||||
Sbjct: 524 aagagggaatcttcctctgggctcccatattcgtcctctgagtcttcctctgagtcttcc 465

              
Query: 374 tct 376
           |||
Sbjct: 464 tct 462



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 72/81 (88%), Gaps = 1/81 (1%)
 Strand = Plus / Minus

                                                                       
Query: 638 tcatattcgtcctctcgggtcctgtattccgtgttctanggtctcatattcctcttctga 697
           |||||||| |||||||||||| | ||||| || ||||| | |||||||||| ||||||||
Sbjct: 155 tcatattcttcctctcgggtcttatattc-gtcttctaggctctcatattcttcttctga 97

                                
Query: 698 gtcttccgctcgagtcctata 718
           ||||||| |||||||||||||
Sbjct: 96  gtcttcctctcgagtcctata 76



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                      
Query: 347 tcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           |||||||||||||| ||||||||||| |||||||  |||||||
Sbjct: 479 tcctctgagtcttcctctgagtcttcttctaaagccccatatt 437



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 428 tctgagtcttcttctaaagttccatattcgtcctct 463
           |||||||||||||||||||  |||||||||| ||||
Sbjct: 464 tctgagtcttcttctaaagccccatattcgttctct 429



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 72/88 (81%)
 Strand = Plus / Minus

                                                                       
Query: 486 ggttcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcc 545
           ||||||||||||  |||||| |||||||||| | | | | |||||||| |||| || |  
Sbjct: 415 ggttcccatatttttcttctaagtctttctcgagaattccatattcgtcctcttgggttt 356

                                       
Query: 546 catatttgttttctgggctcccatattc 573
            ||||| ||| |||||||||||||||||
Sbjct: 355 tatattggttctctgggctcccatattc 328



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 49/57 (85%), Gaps = 3/57 (5%)
 Strand = Plus / Minus

                                                                    
Query: 594 cgtattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcct 650
           |||||||||||||||||||| ||||||     |||||||  ||||||||||||||||
Sbjct: 280 cgtattcgtcttctaggatttcatatt---cgtcttctagagtttcatattcgtcct 227



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 65/79 (82%)
 Strand = Plus / Minus

                                                                       
Query: 450 catattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgagt 509
           ||||||| |||||| ||||| |||||| |   ||| || || ||||||| ||||||||||
Sbjct: 154 catattcttcctctcgggtcttatattcgtcttctaggctctcatattcttcttctgagt 95

                              
Query: 510 ctttctctaaagtcctata 528
           ||| ||||  |||||||||
Sbjct: 94  cttcctctcgagtcctata 76



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                      
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           ||||||| |||||||||||||| |||  ||| | ||| || |||||| |||||||||||
Sbjct: 112 catattcttcttctgagtcttcctctcgagtcctatactcttcctctagggtcctatat 54



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| ||||||||||| |||||||||||
Sbjct: 506 gggctcccatattcgtcctctgagtcttc 478



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 503 tctgagtctttctctaaagtcctatattcgttctctg 539
           ||||||||||  ||||||| || ||||||||||||||
Sbjct: 464 tctgagtcttcttctaaagccccatattcgttctctg 428



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 356 tcttcttctgagtcttcctct 376
           |||||||||||||||||||||
Sbjct: 107 tcttcttctgagtcttcctct 87



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 410 gggctgccatattcgtcttctgagtctt 437
           ||||| |||||||| |||||||||||||
Sbjct: 341 gggctcccatattcttcttctgagtctt 314



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| ||||||||||||| | || ||||| |||||||
Sbjct: 334 catattcttcttctgagtctttctctagagtcttatattc 295
to top
>gb|U94954.1|MCU94954 Merxmuellera cincta RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 400

 Score =  131 bits (66), Expect = 4e-27
 Identities = 156/186 (83%)
 Strand = Plus / Minus

                                                                       
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcc 470
           |||| |||||||| |||||| ||||||| |||| | ||||||||||||||||| ||||| 
Sbjct: 314 ggctcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggtct 255

                                                                       
Query: 471 tatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||| | |||||||| |||||||||  || |||||||||||||||| ||||| |||||
Sbjct: 254 tatattcgttctctgggctcccatattgttcctctgagtctttctctagagtcccatatt 195

                                                                       
Query: 531 cgttctctgggttcccatatttgttttctgggctcccatattcgttttctagggtttcat 590
           |||  ||| || |  |||||| ||  ||| |  ||| |||||||| ||||||||||||||
Sbjct: 194 cgtcttctagggtttcatattcgtcctctagagtcctatattcgtcttctagggtttcat 135

                 
Query: 591 attcgt 596
           ||||||
Sbjct: 134 attcgt 129



 Score =  101 bits (51), Expect = 3e-18
 Identities = 83/93 (89%), Gaps = 1/93 (1%)
 Strand = Plus / Minus

                                                                       
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
           ||||||| ||||||||||||||||||||||||||| |||| |||  |||| | |||||||
Sbjct: 150 tcttctagggtttcatattcgtcctctcgggtcctatatt-cgttctctaggctctcata 92

                                            
Query: 686 ttcctcttctgagtcttccgctcgagtcctata 718
           ||| || |||||||||||| |||||||||||||
Sbjct: 91  ttcttcctctgagtcttcctctcgagtcctata 59



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 60/65 (92%)
 Strand = Plus / Minus

                                                                       
Query: 325 ttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtacc 384
           ||||||||||||| | |||||||||||||||||||| ||||||||||| |||||||| ||
Sbjct: 400 ttcctctgggctcccatattcgtcctctgagtcttcctctgagtcttcttctaaagtccc 341

                
Query: 385 atatt 389
           |||||
Sbjct: 340 atatt 336



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 78/92 (84%)
 Strand = Plus / Minus

                                                                       
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatttgctctctgggttcccatat 496
           |||||||  ||| |||||||||||||| |||||||||||| | ||||| || || |||||
Sbjct: 150 tcttctagggtttcatattcgtcctctcgggtcctatattcgttctctaggctctcatat 91

                                           
Query: 497 tcctcttctgagtctttctctaaagtcctata 528
           || || |||||||||| ||||  |||||||||
Sbjct: 90  tcttcctctgagtcttcctctcgagtcctata 59



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 55/63 (87%), Gaps = 1/63 (1%)
 Strand = Plus / Minus

                                                                       
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
           ||||||| ||||||||||||||||||| | ||||| |||| ||| ||||| ||| |||||
Sbjct: 192 tcttctagggtttcatattcgtcctctagagtcctatatt-cgtcttctagggtttcata 134

              
Query: 686 ttc 688
           |||
Sbjct: 133 ttc 131



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                               
Query: 428 tctgagtcttcttctaaagttccatattcgtcctct 463
           |||||||||||||||||||| |||||||||| ||||
Sbjct: 363 tctgagtcttcttctaaagtcccatattcgttctct 328



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 503 tctgagtctttctctaaagtcctatattcgttctctg 539
           ||||||||||  |||||||||| ||||||||||||||
Sbjct: 363 tctgagtcttcttctaaagtcccatattcgttctctg 327



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| ||||||||||| |||||||||||
Sbjct: 393 gggctcccatattcgtcctctgagtcttc 365



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||| ||||||| ||||| ||||||||||||||
Sbjct: 106 ctctaggctctcatattcttcctctgagtcttc 74



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 275 catattcgtcctctcgggtc 256
to top
>gb|U94952.1|LPU94952 Lamprothyrsus peruvianus RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 438

 Score =  131 bits (66), Expect = 4e-27
 Identities = 156/186 (83%)
 Strand = Plus / Minus

                                                                       
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcc 470
           |||| |||||||| |||||| ||||||| |||| | ||||||||||||||||| ||||| 
Sbjct: 331 ggctcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggtct 272

                                                                       
Query: 471 tatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||| | ||| |||| |||||||||| || |||||||||||||||| |||||||||||
Sbjct: 271 tatattggttctttgggctcccatattcttcctctgagtctttctctagagtcctatatt 212

                                                                       
Query: 531 cgttctctgggttcccatatttgttttctgggctcccatattcgttttctagggtttcat 590
           ||| |||| || |||| |||| || |||| || |  |||||||||  ||| |||| | ||
Sbjct: 211 cgtcctctaggatcccgtattcgtcttctagggtttcatattcgtcctctcgggtcttat 152

                 
Query: 591 attcgt 596
           ||||||
Sbjct: 151 attcgt 146



 Score =  103 bits (52), Expect = 8e-19
 Identities = 70/76 (92%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           |||| ||||||||||||||||||| | |||||||||||||||||||| ||||||||||| 
Sbjct: 428 aagagggaatcttcctctgggctcccatattcgtcctctgagtcttcctctgagtcttct 369

                           
Query: 374 tctaaagtaccatatt 389
           |||||||| |||||||
Sbjct: 368 tctaaagtcccatatt 353



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 72/81 (88%), Gaps = 1/81 (1%)
 Strand = Plus / Minus

                                                                       
Query: 638 tcatattcgtcctctcgggtcctgtattccgtgttctanggtctcatattcctcttctga 697
           |||||||| |||||||||||| | ||||| || ||||| | |||||||||| ||||||||
Sbjct: 134 tcatattcttcctctcgggtcttatattc-gtcttctaggctctcatattcttcttctga 76

                                
Query: 698 gtcttccgctcgagtcctata 718
           ||||||| |||||||||||||
Sbjct: 75  gtcttcctctcgagtcctata 55



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 56/63 (88%), Gaps = 1/63 (1%)
 Strand = Plus / Minus

                                                                       
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
           ||||||| ||||||||||||||||||||||||| | |||| ||| ||||| | |||||||
Sbjct: 188 tcttctagggtttcatattcgtcctctcgggtcttatatt-cgttttctaggctctcata 130

              
Query: 686 ttc 688
           |||
Sbjct: 129 ttc 127



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                               
Query: 428 tctgagtcttcttctaaagttccatattcgtcctct 463
           |||||||||||||||||||| |||||||||| ||||
Sbjct: 380 tctgagtcttcttctaaagtcccatattcgttctct 345



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 503 tctgagtctttctctaaagtcctatattcgttctctg 539
           ||||||||||  |||||||||| ||||||||||||||
Sbjct: 380 tctgagtcttcttctaaagtcccatattcgttctctg 344



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 65/79 (82%)
 Strand = Plus / Minus

                                                                       
Query: 450 catattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgagt 509
           ||||||| |||||| ||||| |||||| |   ||| || || ||||||| ||||||||||
Sbjct: 133 catattcttcctctcgggtcttatattcgtcttctaggctctcatattcttcttctgagt 74

                              
Query: 510 ctttctctaaagtcctata 528
           ||| ||||  |||||||||
Sbjct: 73  cttcctctcgagtcctata 55



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                      
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           ||||||| |||||||||||||| |||  ||| | ||| || |||||| |||||||||||
Sbjct: 91  catattcttcttctgagtcttcctctcgagtcctatactcttcctctagggtcctatat 33



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                 
Query: 410 gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctct 463
           ||||| |||||||| || ||||||||||  |||| ||| | |||||||||||||
Sbjct: 257 gggctcccatattcttcctctgagtctttctctagagtcctatattcgtcctct 204



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| ||||||||||| |||||||||||
Sbjct: 410 gggctcccatattcgtcctctgagtcttc 382



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 356 tcttcttctgagtcttcctct 376
           |||||||||||||||||||||
Sbjct: 86  tcttcttctgagtcttcctct 66



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 292 catattcgtcctctcgggtc 273



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| || |||||||||| | || |||||||||||||
Sbjct: 250 catattcttcctctgagtctttctctagagtcctatattc 211
to top
>gb|AY174481.1| Hymenachne donacifolia DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 477

 Score =  129 bits (65), Expect = 1e-26
 Identities = 116/133 (87%)
 Strand = Plus / Minus

                                                                       
Query: 419 tattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatttg 478
           |||||||||||| ||||||| |||| ||||||||||||||||||| ||||| |||||| |
Sbjct: 353 tattcgtcttctaagtcttcctctagagttccatattcgtcctctcgggtcttatattcg 294

                                                                       
Query: 479 ctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttctct 538
            |||||||| |||||||||| || | |||||||||||||| ||||||||| || | ||||
Sbjct: 293 ttctctgggctcccatattcttcctttgagtctttctctagagtcctatactcttcctct 234

                        
Query: 539 gggttcccatatt 551
            || |||||||||
Sbjct: 233 aggatcccatatt 221



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 67/76 (88%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           ||||| ||||||||||| ||||||   |||||||| ||||||||||| ||||||||||| 
Sbjct: 452 aagatagaatcttcctccgggctccgatattcgtcttctgagtcttcctctgagtcttct 393

                           
Query: 374 tctaaagtaccatatt 389
           |||||||| |||||||
Sbjct: 392 tctaaagtcccatatt 377



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 671 ttctanggtctcatattcctcttctgagtcttccgctcgagtcctata 718
           ||||| ||| |||||||| || |||||||||||| |||||||||||||
Sbjct: 216 ttctagggtttcatattcgtcctctgagtcttcctctcgagtcctata 169



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 67/80 (83%)
 Strand = Plus / Minus

                                                                       
Query: 494 tattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccatatttg 553
           ||||| |||||| |||||| ||||| ||| | |||||||| |||| || ||  ||||| |
Sbjct: 353 tattcgtcttctaagtcttcctctagagttccatattcgtcctctcgggtcttatattcg 294

                               
Query: 554 ttttctgggctcccatattc 573
           || |||||||||||||||||
Sbjct: 293 ttctctgggctcccatattc 274



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 404 tctgagtcttcttctaaagtcccatattc 376



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 229 tcccatattcatcttctagggtttcatattcgt 197



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 626 tcttctanggtttcatattcgtcctct 652
           ||||||| |||||||||||||||||||
Sbjct: 218 tcttctagggtttcatattcgtcctct 192



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 418 atattcgtcttctgagtcttc 438
           |||||||||||||||||||||
Sbjct: 426 atattcgtcttctgagtcttc 406



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 322 catattcgtcctctcgggtc 303



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 341 tattcgtcctctgagtcttc 360
           ||||||||||||||||||||
Sbjct: 203 tattcgtcctctgagtcttc 184



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                       
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||||| ||||||||||| |||  ||| | ||| || |||||| |||||| |||||
Sbjct: 205 catattcgtcctctgagtcttcctctcgagtcctatactcttcctctcgggtccgatatt 146
to top
>gb|AF355998.1| Cortaderia archboldii RNA polymerase beta-subunit (rpoC2) gene,
           partial cds; chloroplast gene for chloroplast product
          Length = 479

 Score =  129 bits (65), Expect = 1e-26
 Identities = 128/149 (85%)
 Strand = Plus / Minus

                                                                       
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcc 470
           |||| |||||||| |||||| ||||||| |||| | ||||||||||||||||| ||||| 
Sbjct: 392 ggctcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggtct 333

                                                                       
Query: 471 tatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||| | |||| ||| |||||||||| || || ||||||||||||| |||||||||||
Sbjct: 332 tatattggttctcagggctcccatattcttcctcggagtctttctctagagtcctatatt 273

                                        
Query: 531 cgttctctgggttcccatatttgttttct 559
           ||| |||| || |||| ||||||| ||||
Sbjct: 272 cgtcctctaggatcccgtatttgtcttct 244



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 61/66 (92%)
 Strand = Plus / Minus

                                                                       
Query: 324 cttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtac 383
           |||||||||||||| | |||||||||||||||||||| ||||||||||| |||||||| |
Sbjct: 479 cttcctctgggctcccatattcgtcctctgagtcttcctctgagtcttcttctaaagtcc 420

                 
Query: 384 catatt 389
           ||||||
Sbjct: 419 catatt 414



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 71/81 (87%), Gaps = 1/81 (1%)
 Strand = Plus / Minus

                                                                       
Query: 638 tcatattcgtcctctcgggtcctgtattccgtgttctanggtctcatattcctcttctga 697
           |||||||| |||||||||||| | ||||| || ||||| | |||||||||| ||||||||
Sbjct: 153 tcatattcttcctctcgggtcttatattc-gtcttctaggctctcatattcttcttctga 95

                                
Query: 698 gtcttccgctcgagtcctata 718
           ||||||  |||||||||||||
Sbjct: 94  gtcttcttctcgagtcctata 74



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                               
Query: 428 tctgagtcttcttctaaagttccatattcgtcctct 463
           |||||||||||||||||||| |||||||||| ||||
Sbjct: 441 tctgagtcttcttctaaagtcccatattcgttctct 406



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                      
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           ||||||| ||||||||||||||||||  ||| | ||| || |||||| |||||||||||
Sbjct: 110 catattcttcttctgagtcttcttctcgagtcctatactcttcctctagggtcctatat 52



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 54/63 (85%), Gaps = 3/63 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |   ||||||  ||||||||||||||| ||||||
Sbjct: 234 tattcgtcctctaggatcccatattca---tcttctcgggtttcatattcgtcttctcgg 178

              
Query: 656 gtc 658
           |||
Sbjct: 177 gtc 175



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 503 tctgagtctttctctaaagtcctatattcgttctctg 539
           ||||||||||  |||||||||| ||||||||||||||
Sbjct: 441 tctgagtcttcttctaaagtcccatattcgttctctg 405



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| |||||| |||||| ||||| | | | |||||||| |||| || ||  ||
Sbjct: 389 tcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggtcttat 330

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| || ||||||||||||||
Sbjct: 329 attggttctcagggctcccatattc 305



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 626 tcttctanggtttcatattcgtcctct 652
           ||||||| |||||||||||||||||||
Sbjct: 249 tcttctagggtttcatattcgtcctct 223



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| ||||||||||| |||||||||||
Sbjct: 471 gggctcccatattcgtcctctgagtcttc 443



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | |||| |||||||||||||||
Sbjct: 218 tcccatattcatcttctcgggtttcatattcgt 186



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 353 catattcgtcctctcgggtc 334



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 333 ggctctcgtattcgtcctctgagtcttcttct 364
           ||||||| ||||| || |||||||||||||||
Sbjct: 116 ggctctcatattcttcttctgagtcttcttct 85
to top
>gb|AF355993.1| Cortaderia araucana RNA polymerase beta-subunit (rpoC2) gene,
           partial cds; chloroplast gene for chloroplast product
          Length = 490

 Score =  129 bits (65), Expect = 1e-26
 Identities = 122/141 (86%)
 Strand = Plus / Minus

                                                                       
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcc 470
           |||| |||||||| |||||| ||||||| |||| | ||||||||||||||||| ||||| 
Sbjct: 385 ggctcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggtct 326

                                                                       
Query: 471 tatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||| | ||| |||| |||||||||| || |||||||||||||||| |||||||||||
Sbjct: 325 tatattggttctttgggctcccatattcttcctctgagtctttctctagagtcctatatt 266

                                
Query: 531 cgttctctgggttcccatatt 551
           ||| |||| || |||| ||||
Sbjct: 265 cgtcctctaggatcccgtatt 245



 Score =  103 bits (52), Expect = 8e-19
 Identities = 70/76 (92%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           |||| ||||||||||||||||||| | |||||||||||||||||||| ||||||||||| 
Sbjct: 482 aagagggaatcttcctctgggctcccatattcgtcctctgagtcttcctctgagtcttct 423

                           
Query: 374 tctaaagtaccatatt 389
           |||||||| |||||||
Sbjct: 422 tctaaagtcccatatt 407



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 72/81 (88%), Gaps = 1/81 (1%)
 Strand = Plus / Minus

                                                                       
Query: 638 tcatattcgtcctctcgggtcctgtattccgtgttctanggtctcatattcctcttctga 697
           |||||||| |||||||||||| | ||||| || ||||| | |||||||||| ||||||||
Sbjct: 146 tcatattcttcctctcgggtcttatattc-gtcttctaggctctcatattcttcttctga 88

                                
Query: 698 gtcttccgctcgagtcctata 718
           ||||||| |||||||||||||
Sbjct: 87  gtcttcctctcgagtcctata 67



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 103/125 (82%), Gaps = 10/125 (8%)
 Strand = Plus / Minus

                                                                       
Query: 564 tcccatattcgttttctagggtttcatattcgtattcgtcttctaggattccatatttag 623
           |||| ||||||| ||||||||||||||||||||      | |||||||| ||||||| | 
Sbjct: 253 tcccgtattcgtcttctagggtttcatattcgt------cctctaggatcccatattca- 201

                                                                       
Query: 624 attcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctca 683
             ||||||  ||||||||||||||||||||||||| | |||| ||| ||||| | |||||
Sbjct: 200 --tcttctcgggtttcatattcgtcctctcgggtcttatatt-cgttttctaggctctca 144

                
Query: 684 tattc 688
           |||||
Sbjct: 143 tattc 139



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                               
Query: 428 tctgagtcttcttctaaagttccatattcgtcctct 463
           |||||||||||||||||||| |||||||||| ||||
Sbjct: 434 tctgagtcttcttctaaagtcccatattcgttctct 399



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 503 tctgagtctttctctaaagtcctatattcgttctctg 539
           ||||||||||  |||||||||| ||||||||||||||
Sbjct: 434 tctgagtcttcttctaaagtcccatattcgttctctg 398



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| |||||| |||||| ||||| | | | |||||||| |||| || ||  ||
Sbjct: 382 tcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggtcttat 323

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| | |||||||||||||||
Sbjct: 322 attggttctttgggctcccatattc 298



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 65/79 (82%)
 Strand = Plus / Minus

                                                                       
Query: 450 catattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgagt 509
           ||||||| |||||| ||||| |||||| |   ||| || || ||||||| ||||||||||
Sbjct: 145 catattcttcctctcgggtcttatattcgtcttctaggctctcatattcttcttctgagt 86

                              
Query: 510 ctttctctaaagtcctata 528
           ||| ||||  |||||||||
Sbjct: 85  cttcctctcgagtcctata 67



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                 
Query: 410 gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctct 463
           ||||| |||||||| || ||||||||||  |||| ||| | |||||||||||||
Sbjct: 311 gggctcccatattcttcctctgagtctttctctagagtcctatattcgtcctct 258



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| ||||||||||| |||||||||||
Sbjct: 464 gggctcccatattcgtcctctgagtcttc 436



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 356 tcttcttctgagtcttcctct 376
           |||||||||||||||||||||
Sbjct: 98  tcttcttctgagtcttcctct 78



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 346 catattcgtcctctcgggtc 327



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| || |||||||||| | || |||||||||||||
Sbjct: 304 catattcttcctctgagtctttctctagagtcctatattc 265
to top
>gb|AF355992.1| Cortaderia rudiuscula RNA polymerase beta-subunit (rpoC2) gene,
           partial cds; chloroplast gene for chloroplast product
          Length = 517

 Score =  129 bits (65), Expect = 1e-26
 Identities = 122/141 (86%)
 Strand = Plus / Minus

                                                                       
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcc 470
           |||| |||||||| |||||| ||||||| |||| | ||||||||||||||||| ||||| 
Sbjct: 403 ggctcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggtct 344

                                                                       
Query: 471 tatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||| | ||| |||| |||||||||| || |||||||||||||||| |||||||||||
Sbjct: 343 tatattggttctttgggctcccatattcttcctctgagtctttctctagagtcctatatt 284

                                
Query: 531 cgttctctgggttcccatatt 551
           ||| |||| || |||| ||||
Sbjct: 283 cgtcctctaggatcccgtatt 263



 Score =  103 bits (52), Expect = 8e-19
 Identities = 70/76 (92%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           |||| ||||||||||||||||||| | |||||||||||||||||||| ||||||||||| 
Sbjct: 500 aagagggaatcttcctctgggctcccatattcgtcctctgagtcttcctctgagtcttct 441

                           
Query: 374 tctaaagtaccatatt 389
           |||||||| |||||||
Sbjct: 440 tctaaagtcccatatt 425



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 71/81 (87%), Gaps = 1/81 (1%)
 Strand = Plus / Minus

                                                                       
Query: 638 tcatattcgtcctctcgggtcctgtattccgtgttctanggtctcatattcctcttctga 697
           |||||||| |||||||||||| | ||||| || ||||| | ||||||||||  |||||||
Sbjct: 164 tcatattcttcctctcgggtcttatattc-gtcttctaggctctcatattctacttctga 106

                                
Query: 698 gtcttccgctcgagtcctata 718
           ||||||| |||||||||||||
Sbjct: 105 gtcttcctctcgagtcctata 85



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 103/125 (82%), Gaps = 10/125 (8%)
 Strand = Plus / Minus

                                                                       
Query: 564 tcccatattcgttttctagggtttcatattcgtattcgtcttctaggattccatatttag 623
           |||| ||||||| ||||||||||||||||||||      | |||||||| ||||||| | 
Sbjct: 271 tcccgtattcgtcttctagggtttcatattcgt------cctctaggatcccatattca- 219

                                                                       
Query: 624 attcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctca 683
             ||||||  ||||||||||||||||||||||||| | |||| ||| ||||| | |||||
Sbjct: 218 --tcttctcgggtttcatattcgtcctctcgggtcttatatt-cgttttctaggctctca 162

                
Query: 684 tattc 688
           |||||
Sbjct: 161 tattc 157



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                               
Query: 428 tctgagtcttcttctaaagttccatattcgtcctct 463
           |||||||||||||||||||| |||||||||| ||||
Sbjct: 452 tctgagtcttcttctaaagtcccatattcgttctct 417



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 503 tctgagtctttctctaaagtcctatattcgttctctg 539
           ||||||||||  |||||||||| ||||||||||||||
Sbjct: 452 tctgagtcttcttctaaagtcccatattcgttctctg 416



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| |||||| |||||| ||||| | | | |||||||| |||| || ||  ||
Sbjct: 400 tcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggtcttat 341

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| | |||||||||||||||
Sbjct: 340 attggttctttgggctcccatattc 316



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                 
Query: 410 gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctct 463
           ||||| |||||||| || ||||||||||  |||| ||| | |||||||||||||
Sbjct: 329 gggctcccatattcttcctctgagtctttctctagagtcctatattcgtcctct 276



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| ||||||||||| |||||||||||
Sbjct: 482 gggctcccatattcgtcctctgagtcttc 454



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 364 catattcgtcctctcgggtc 345



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| || |||||||||| | || |||||||||||||
Sbjct: 322 catattcttcctctgagtctttctctagagtcctatattc 283
to top
>gb|AF355991.1| Cortaderia columbiana RNA polymerase beta-subunit (rpoC2) gene,
           partial cds; chloroplast gene for chloroplast product
          Length = 504

 Score =  129 bits (65), Expect = 1e-26
 Identities = 122/141 (86%)
 Strand = Plus / Minus

                                                                       
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcc 470
           |||| |||||||| |||||| ||||||| |||| | ||||||||||||||||| ||||| 
Sbjct: 408 ggctcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggtct 349

                                                                       
Query: 471 tatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||| | ||| |||| |||||||||| || |||||||||||||||| |||||||||||
Sbjct: 348 tatattggttctttgggctcccatattcttcctctgagtctttctctagagtcctatatt 289

                                
Query: 531 cgttctctgggttcccatatt 551
           ||| |||| || |||| ||||
Sbjct: 288 cgtcctctaggatcccgtatt 268



 Score = 93.7 bits (47), Expect = 8e-16
 Identities = 65/71 (91%)
 Strand = Plus / Minus

                                                                       
Query: 319 ggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaa 378
           ||||||||||||||||||| | |||||||||||||||||||| ||||| ||||| |||||
Sbjct: 500 ggaatcttcctctgggctcccatattcgtcctctgagtcttcctctgaatcttcttctaa 441

                      
Query: 379 agtaccatatt 389
           ||| |||||||
Sbjct: 440 agtcccatatt 430



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 72/81 (88%), Gaps = 1/81 (1%)
 Strand = Plus / Minus

                                                                       
Query: 638 tcatattcgtcctctcgggtcctgtattccgtgttctanggtctcatattcctcttctga 697
           |||||||| |||||||||||| | ||||| || ||||| | |||||||||| ||||||||
Sbjct: 169 tcatattcttcctctcgggtcttatattc-gtcttctaggctctcatattcttcttctga 111

                                
Query: 698 gtcttccgctcgagtcctata 718
           ||||||| |||||||||||||
Sbjct: 110 gtcttcctctcgagtcctata 90



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| |||||| |||||| ||||| | | | |||||||| |||| || ||  ||
Sbjct: 405 tcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggtcttat 346

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| | |||||||||||||||
Sbjct: 345 attggttctttgggctcccatattc 321



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||| ||||||| ||||||||||||||||||||
Sbjct: 276 tcccgtattcgtcttctagggtttcatattcgt 244



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 428 tctgagtcttcttctaaagttccatattcgtcctct 463
           ||||| |||||||||||||| |||||||||| ||||
Sbjct: 457 tctgaatcttcttctaaagtcccatattcgttctct 422



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 626 tcttctanggtttcatattcgtcctct 652
           ||||||| |||||||||||||||||||
Sbjct: 265 tcttctagggtttcatattcgtcctct 239



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 65/79 (82%)
 Strand = Plus / Minus

                                                                       
Query: 450 catattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgagt 509
           ||||||| |||||| ||||| |||||| |   ||| || || ||||||| ||||||||||
Sbjct: 168 catattcttcctctcgggtcttatattcgtcttctaggctctcatattcttcttctgagt 109

                              
Query: 510 ctttctctaaagtcctata 528
           ||| ||||  |||||||||
Sbjct: 108 cttcctctcgagtcctata 90



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                      
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           ||||||| |||||||||||||| |||  ||| | ||| || |||||| |||||||||||
Sbjct: 126 catattcttcttctgagtcttcctctcgagtcctatactcttcctctagggtcctatat 68



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                 
Query: 410 gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctct 463
           ||||| |||||||| || ||||||||||  |||| ||| | |||||||||||||
Sbjct: 334 gggctcccatattcttcctctgagtctttctctagagtcctatattcgtcctct 281



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| ||||||||||| |||||||||||
Sbjct: 487 gggctcccatattcgtcctctgagtcttc 459



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 515 tctaaagtcctatattcgttctctg 539
           |||||||||| ||||||||||||||
Sbjct: 445 tctaaagtcccatattcgttctctg 421



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 356 tcttcttctgagtcttcctct 376
           |||||||||||||||||||||
Sbjct: 121 tcttcttctgagtcttcctct 101



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 369 catattcgtcctctcgggtc 350



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| || |||||||||| | || |||||||||||||
Sbjct: 327 catattcttcctctgagtctttctctagagtcctatattc 288
to top
>gb|AF355990.1| Cortaderia nitida RNA polymerase beta-subunit (rpoC2) gene, partial
           cds; chloroplast gene for chloroplast product
          Length = 495

 Score =  129 bits (65), Expect = 1e-26
 Identities = 122/141 (86%)
 Strand = Plus / Minus

                                                                       
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcc 470
           |||| |||||||| |||||| ||||||| |||| | ||||||||||||||||| ||||| 
Sbjct: 397 ggctcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggtct 338

                                                                       
Query: 471 tatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||| | ||| |||| |||||||||| || |||||||||||||||| |||||||||||
Sbjct: 337 tatattggttctttgggctcccatattcttcctctgagtctttctctagagtcctatatt 278

                                
Query: 531 cgttctctgggttcccatatt 551
           ||| |||| || |||| ||||
Sbjct: 277 cgtcctctaggatcccgtatt 257



 Score =  103 bits (52), Expect = 8e-19
 Identities = 70/76 (92%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           |||| ||||||||||||||||||| | |||||||||||||||||||| ||||||||||| 
Sbjct: 494 aagagggaatcttcctctgggctcccatattcgtcctctgagtcttcctctgagtcttct 435

                           
Query: 374 tctaaagtaccatatt 389
           |||||||| |||||||
Sbjct: 434 tctaaagtcccatatt 419



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 72/81 (88%), Gaps = 1/81 (1%)
 Strand = Plus / Minus

                                                                       
Query: 638 tcatattcgtcctctcgggtcctgtattccgtgttctanggtctcatattcctcttctga 697
           |||||||| |||||||||||| | ||||| || ||||| | |||||||||| ||||||||
Sbjct: 158 tcatattcttcctctcgggtcttatattc-gtcttctaggctctcatattcttcttctga 100

                                
Query: 698 gtcttccgctcgagtcctata 718
           ||||||| |||||||||||||
Sbjct: 99  gtcttcctctcgagtcctata 79



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 103/125 (82%), Gaps = 10/125 (8%)
 Strand = Plus / Minus

                                                                       
Query: 564 tcccatattcgttttctagggtttcatattcgtattcgtcttctaggattccatatttag 623
           |||| ||||||| ||||||||||||||||||||      | |||||||| ||||||| | 
Sbjct: 265 tcccgtattcgtcttctagggtttcatattcgt------cctctaggatcccatattca- 213

                                                                       
Query: 624 attcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctca 683
             ||||||  ||||||||||||||||||||||||| | |||| ||| ||||| | |||||
Sbjct: 212 --tcttctcgggtttcatattcgtcctctcgggtcttatatt-cgttttctaggctctca 156

                
Query: 684 tattc 688
           |||||
Sbjct: 155 tattc 151



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                               
Query: 428 tctgagtcttcttctaaagttccatattcgtcctct 463
           |||||||||||||||||||| |||||||||| ||||
Sbjct: 446 tctgagtcttcttctaaagtcccatattcgttctct 411



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 503 tctgagtctttctctaaagtcctatattcgttctctg 539
           ||||||||||  |||||||||| ||||||||||||||
Sbjct: 446 tctgagtcttcttctaaagtcccatattcgttctctg 410



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| |||||| |||||| ||||| | | | |||||||| |||| || ||  ||
Sbjct: 394 tcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggtcttat 335

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| | |||||||||||||||
Sbjct: 334 attggttctttgggctcccatattc 310



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 65/79 (82%)
 Strand = Plus / Minus

                                                                       
Query: 450 catattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgagt 509
           ||||||| |||||| ||||| |||||| |   ||| || || ||||||| ||||||||||
Sbjct: 157 catattcttcctctcgggtcttatattcgtcttctaggctctcatattcttcttctgagt 98

                              
Query: 510 ctttctctaaagtcctata 528
           ||| ||||  |||||||||
Sbjct: 97  cttcctctcgagtcctata 79



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                      
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           ||||||| |||||||||||||| |||  ||| | ||| || |||||| |||||||||||
Sbjct: 115 catattcttcttctgagtcttcctctcgagtcctatactcttcctctagggtcctatat 57



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                 
Query: 410 gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctct 463
           ||||| |||||||| || ||||||||||  |||| ||| | |||||||||||||
Sbjct: 323 gggctcccatattcttcctctgagtctttctctagagtcctatattcgtcctct 270



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| ||||||||||| |||||||||||
Sbjct: 476 gggctcccatattcgtcctctgagtcttc 448



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 356 tcttcttctgagtcttcctct 376
           |||||||||||||||||||||
Sbjct: 110 tcttcttctgagtcttcctct 90



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 358 catattcgtcctctcgggtc 339



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| || |||||||||| | || |||||||||||||
Sbjct: 316 catattcttcctctgagtctttctctagagtcctatattc 277
to top
>gb|AF355989.1| Cortaderia hapalotricha RNA polymerase beta-subunit (rpoC2) gene,
           partial cds; chloroplast gene for chloroplast product
          Length = 503

 Score =  129 bits (65), Expect = 1e-26
 Identities = 122/141 (86%)
 Strand = Plus / Minus

                                                                       
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcc 470
           |||| |||||||| |||||| ||||||| |||| | ||||||||||||||||| ||||| 
Sbjct: 394 ggctcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggtct 335

                                                                       
Query: 471 tatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||| | ||| |||| |||||||||| || |||||||||||||||| |||||||||||
Sbjct: 334 tatattggttctttgggctcccatattcttcctctgagtctttctctagagtcctatatt 275

                                
Query: 531 cgttctctgggttcccatatt 551
           ||| |||| || |||| ||||
Sbjct: 274 cgtcctctaggatcccgtatt 254



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 69/76 (90%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           |||| ||||||||||||||||||| | |||||||||||||||||||| ||||| ||||| 
Sbjct: 491 aagagggaatcttcctctgggctcccatattcgtcctctgagtcttcctctgaatcttct 432

                           
Query: 374 tctaaagtaccatatt 389
           |||||||| |||||||
Sbjct: 431 tctaaagtcccatatt 416



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 72/81 (88%), Gaps = 1/81 (1%)
 Strand = Plus / Minus

                                                                       
Query: 638 tcatattcgtcctctcgggtcctgtattccgtgttctanggtctcatattcctcttctga 697
           |||||||| |||||||||||| | ||||| || ||||| | |||||||||| ||||||||
Sbjct: 155 tcatattcttcctctcgggtcttatattc-gtcttctaggctctcatattcttcttctga 97

                                
Query: 698 gtcttccgctcgagtcctata 718
           ||||||| |||||||||||||
Sbjct: 96  gtcttcctctcgagtcctata 76



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 102/125 (81%), Gaps = 10/125 (8%)
 Strand = Plus / Minus

                                                                       
Query: 564 tcccatattcgttttctagggtttcatattcgtattcgtcttctaggattccatatttag 623
           |||| ||||||| ||||||||||||||||||||      | |||||||| ||||||| | 
Sbjct: 262 tcccgtattcgtcttctagggtttcatattcgt------cctctaggatcccatattca- 210

                                                                       
Query: 624 attcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctca 683
             ||||||  |||||||||||| |||||||||||| | |||| ||| ||||| | |||||
Sbjct: 209 --tcttctcgggtttcatattcttcctctcgggtcttatatt-cgttttctaggctctca 153

                
Query: 684 tattc 688
           |||||
Sbjct: 152 tattc 148



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| |||||| |||||| ||||| | | | |||||||| |||| || ||  ||
Sbjct: 391 tcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggtcttat 332

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| | |||||||||||||||
Sbjct: 331 attggttctttgggctcccatattc 307



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 428 tctgagtcttcttctaaagttccatattcgtcctct 463
           ||||| |||||||||||||| |||||||||| ||||
Sbjct: 443 tctgaatcttcttctaaagtcccatattcgttctct 408



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 65/79 (82%)
 Strand = Plus / Minus

                                                                       
Query: 450 catattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgagt 509
           ||||||| |||||| ||||| |||||| |   ||| || || ||||||| ||||||||||
Sbjct: 154 catattcttcctctcgggtcttatattcgtcttctaggctctcatattcttcttctgagt 95

                              
Query: 510 ctttctctaaagtcctata 528
           ||| ||||  |||||||||
Sbjct: 94  cttcctctcgagtcctata 76



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                      
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           ||||||| |||||||||||||| |||  ||| | ||| || |||||| |||||||||||
Sbjct: 112 catattcttcttctgagtcttcctctcgagtcctatactcttcctctagggtcctatat 54



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                 
Query: 410 gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctct 463
           ||||| |||||||| || ||||||||||  |||| ||| | |||||||||||||
Sbjct: 320 gggctcccatattcttcctctgagtctttctctagagtcctatattcgtcctct 267



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| ||||||||||| |||||||||||
Sbjct: 473 gggctcccatattcgtcctctgagtcttc 445



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 515 tctaaagtcctatattcgttctctg 539
           |||||||||| ||||||||||||||
Sbjct: 431 tctaaagtcccatattcgttctctg 407



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 356 tcttcttctgagtcttcctct 376
           |||||||||||||||||||||
Sbjct: 107 tcttcttctgagtcttcctct 87



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 355 catattcgtcctctcgggtc 336



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| || |||||||||| | || |||||||||||||
Sbjct: 313 catattcttcctctgagtctttctctagagtcctatattc 274
to top
>gb|AF355988.1| Cortaderia bifida RNA polymerase beta-subunit (rpoC2) gene, partial
           cds; chloroplast gene for chloroplast product
          Length = 505

 Score =  129 bits (65), Expect = 1e-26
 Identities = 122/141 (86%)
 Strand = Plus / Minus

                                                                       
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcc 470
           |||| |||||||| |||||| ||||||| |||| | ||||||||||||||||| ||||| 
Sbjct: 391 ggctcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggtct 332

                                                                       
Query: 471 tatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||| | ||| |||| |||||||||| || |||||||||||||||| |||||||||||
Sbjct: 331 tatattggttctttgggctcccatattcttcctctgagtctttctctagagtcctatatt 272

                                
Query: 531 cgttctctgggttcccatatt 551
           ||| |||| || |||| ||||
Sbjct: 271 cgtcctctaggatcccgtatt 251



 Score =  103 bits (52), Expect = 8e-19
 Identities = 70/76 (92%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           |||| ||||||||||||||||||| | |||||||||||||||||||| ||||||||||| 
Sbjct: 488 aagagggaatcttcctctgggctcccatattcgtcctctgagtcttcctctgagtcttct 429

                           
Query: 374 tctaaagtaccatatt 389
           |||||||| |||||||
Sbjct: 428 tctaaagtcccatatt 413



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 72/81 (88%), Gaps = 1/81 (1%)
 Strand = Plus / Minus

                                                                       
Query: 638 tcatattcgtcctctcgggtcctgtattccgtgttctanggtctcatattcctcttctga 697
           |||||||| |||||||||||| | ||||| || ||||| | |||||||||| ||||||||
Sbjct: 152 tcatattcttcctctcgggtcttatattc-gtcttctaggctctcatattcttcttctga 94

                                
Query: 698 gtcttccgctcgagtcctata 718
           ||||||| |||||||||||||
Sbjct: 93  gtcttcctctcgagtcctata 73



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 103/125 (82%), Gaps = 10/125 (8%)
 Strand = Plus / Minus

                                                                       
Query: 564 tcccatattcgttttctagggtttcatattcgtattcgtcttctaggattccatatttag 623
           |||| ||||||| ||||||||||||||||||||      | |||||||| ||||||| | 
Sbjct: 259 tcccgtattcgtcttctagggtttcatattcgt------cctctaggatcccatattca- 207

                                                                       
Query: 624 attcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctca 683
             ||||||  ||||||||||||||||||||||||| | |||| ||| ||||| | |||||
Sbjct: 206 --tcttctcgggtttcatattcgtcctctcgggtcttatatt-cgttttctaggctctca 150

                
Query: 684 tattc 688
           |||||
Sbjct: 149 tattc 145



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                               
Query: 428 tctgagtcttcttctaaagttccatattcgtcctct 463
           |||||||||||||||||||| |||||||||| ||||
Sbjct: 440 tctgagtcttcttctaaagtcccatattcgttctct 405



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 503 tctgagtctttctctaaagtcctatattcgttctctg 539
           ||||||||||  |||||||||| ||||||||||||||
Sbjct: 440 tctgagtcttcttctaaagtcccatattcgttctctg 404



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| |||||| |||||| ||||| | | | |||||||| |||| || ||  ||
Sbjct: 388 tcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggtcttat 329

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| | |||||||||||||||
Sbjct: 328 attggttctttgggctcccatattc 304



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 65/79 (82%)
 Strand = Plus / Minus

                                                                       
Query: 450 catattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgagt 509
           ||||||| |||||| ||||| |||||| |   ||| || || ||||||| ||||||||||
Sbjct: 151 catattcttcctctcgggtcttatattcgtcttctaggctctcatattcttcttctgagt 92

                              
Query: 510 ctttctctaaagtcctata 528
           ||| ||||  |||||||||
Sbjct: 91  cttcctctcgagtcctata 73



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                      
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           ||||||| |||||||||||||| |||  ||| | ||| || |||||| |||||||||||
Sbjct: 109 catattcttcttctgagtcttcctctcgagtcctatactcttcctctagggtcctatat 51



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                 
Query: 410 gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctct 463
           ||||| |||||||| || ||||||||||  |||| ||| | |||||||||||||
Sbjct: 317 gggctcccatattcttcctctgagtctttctctagagtcctatattcgtcctct 264



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| ||||||||||| |||||||||||
Sbjct: 470 gggctcccatattcgtcctctgagtcttc 442



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 356 tcttcttctgagtcttcctct 376
           |||||||||||||||||||||
Sbjct: 104 tcttcttctgagtcttcctct 84



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 352 catattcgtcctctcgggtc 333



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| || |||||||||| | || |||||||||||||
Sbjct: 310 catattcttcctctgagtctttctctagagtcctatattc 271
to top
>gb|AF355987.1| Cortaderia jubata RNA polymerase beta-subunit (rpoC2) gene, partial
           cds; chloroplast gene for chloroplast product
          Length = 512

 Score =  129 bits (65), Expect = 1e-26
 Identities = 122/141 (86%)
 Strand = Plus / Minus

                                                                       
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcc 470
           |||| |||||||| |||||| ||||||| |||| | ||||||||||||||||| ||||| 
Sbjct: 408 ggctcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggtct 349

                                                                       
Query: 471 tatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||| | ||| |||| |||||||||| || |||||||||||||||| |||||||||||
Sbjct: 348 tatattggttctttgggctcccatattcttcctctgagtctttctctagagtcctatatt 289

                                
Query: 531 cgttctctgggttcccatatt 551
           ||| |||| || |||| ||||
Sbjct: 288 cgtcctctaggatcccgtatt 268



 Score =  103 bits (52), Expect = 8e-19
 Identities = 70/76 (92%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           |||| ||||||||||||||||||| | |||||||||||||||||||| ||||||||||| 
Sbjct: 505 aagagggaatcttcctctgggctcccatattcgtcctctgagtcttcctctgagtcttct 446

                           
Query: 374 tctaaagtaccatatt 389
           |||||||| |||||||
Sbjct: 445 tctaaagtcccatatt 430



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 72/81 (88%), Gaps = 1/81 (1%)
 Strand = Plus / Minus

                                                                       
Query: 638 tcatattcgtcctctcgggtcctgtattccgtgttctanggtctcatattcctcttctga 697
           |||||||| |||||||||||| | ||||| || ||||| | |||||||||| ||||||||
Sbjct: 169 tcatattcttcctctcgggtcttatattc-gtcttctaggctctcatattcttcttctga 111

                                
Query: 698 gtcttccgctcgagtcctata 718
           ||||||| |||||||||||||
Sbjct: 110 gtcttcctctcgagtcctata 90



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 103/125 (82%), Gaps = 10/125 (8%)
 Strand = Plus / Minus

                                                                       
Query: 564 tcccatattcgttttctagggtttcatattcgtattcgtcttctaggattccatatttag 623
           |||| ||||||| ||||||||||||||||||||      | |||||||| ||||||| | 
Sbjct: 276 tcccgtattcgtcttctagggtttcatattcgt------cctctaggatcccatattca- 224

                                                                       
Query: 624 attcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctca 683
             ||||||  ||||||||||||||||||||||||| | |||| ||| ||||| | |||||
Sbjct: 223 --tcttctcgggtttcatattcgtcctctcgggtcttatatt-cgttttctaggctctca 167

                
Query: 684 tattc 688
           |||||
Sbjct: 166 tattc 162



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                               
Query: 428 tctgagtcttcttctaaagttccatattcgtcctct 463
           |||||||||||||||||||| |||||||||| ||||
Sbjct: 457 tctgagtcttcttctaaagtcccatattcgttctct 422



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 503 tctgagtctttctctaaagtcctatattcgttctctg 539
           ||||||||||  |||||||||| ||||||||||||||
Sbjct: 457 tctgagtcttcttctaaagtcccatattcgttctctg 421



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| |||||| |||||| ||||| | | | |||||||| |||| || ||  ||
Sbjct: 405 tcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggtcttat 346

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| | |||||||||||||||
Sbjct: 345 attggttctttgggctcccatattc 321



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 65/79 (82%)
 Strand = Plus / Minus

                                                                       
Query: 450 catattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgagt 509
           ||||||| |||||| ||||| |||||| |   ||| || || ||||||| ||||||||||
Sbjct: 168 catattcttcctctcgggtcttatattcgtcttctaggctctcatattcttcttctgagt 109

                              
Query: 510 ctttctctaaagtcctata 528
           ||| ||||  |||||||||
Sbjct: 108 cttcctctcgagtcctata 90



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                      
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           ||||||| |||||||||||||| |||  ||| | ||| || |||||| |||||||||||
Sbjct: 126 catattcttcttctgagtcttcctctcgagtcctatactcttcctctagggtcctatat 68



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                 
Query: 410 gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctct 463
           ||||| |||||||| || ||||||||||  |||| ||| | |||||||||||||
Sbjct: 334 gggctcccatattcttcctctgagtctttctctagagtcctatattcgtcctct 281



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| ||||||||||| |||||||||||
Sbjct: 487 gggctcccatattcgtcctctgagtcttc 459



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 356 tcttcttctgagtcttcctct 376
           |||||||||||||||||||||
Sbjct: 121 tcttcttctgagtcttcctct 101



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 369 catattcgtcctctcgggtc 350



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| || |||||||||| | || |||||||||||||
Sbjct: 327 catattcttcctctgagtctttctctagagtcctatattc 288
to top
>gb|AF355986.1| Cortaderia sericantha RNA polymerase beta-subunit (rpoC2) gene,
           partial cds; chloroplast gene for chloroplast product
          Length = 480

 Score =  129 bits (65), Expect = 1e-26
 Identities = 122/141 (86%)
 Strand = Plus / Minus

                                                                       
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcc 470
           |||| |||||||| |||||| ||||||| |||| | ||||||||||||||||| ||||| 
Sbjct: 366 ggctcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggtct 307

                                                                       
Query: 471 tatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||| | ||| |||| |||||||||| || |||||||||||||||| |||||||||||
Sbjct: 306 tatattggttctttgggctcccatattcttcctctgagtctttctctagagtcctatatt 247

                                
Query: 531 cgttctctgggttcccatatt 551
           ||| |||| || |||| ||||
Sbjct: 246 cgtcctctaggatcccgtatt 226



 Score =  111 bits (56), Expect = 3e-21
 Identities = 131/155 (84%), Gaps = 10/155 (6%)
 Strand = Plus / Minus

                                                                       
Query: 564 tcccatattcgttttctagggtttcatattcgtattcgtcttctaggattccatatttag 623
           |||| ||||||| ||||||||||||||||||||      | |||||||| ||||||| | 
Sbjct: 234 tcccgtattcgtcttctagggtttcatattcgt------cctctaggatcccatattca- 182

                                                                       
Query: 624 attcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctca 683
             ||||||  ||||||||||||||||||||||||| | ||||| || ||||| | |||||
Sbjct: 181 --tcttctcgggtttcatattcgtcctctcgggtcttatattc-gtcttctaggctctca 125

                                              
Query: 684 tattcctcttctgagtcttccgctcgagtcctata 718
           ||||| ||||||||||||||| |||||||||||||
Sbjct: 124 tattcttcttctgagtcttcctctcgagtcctata 90



 Score =  103 bits (52), Expect = 8e-19
 Identities = 70/76 (92%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           |||| ||||||||||||||||||| | |||||||||||||||||||| ||||||||||| 
Sbjct: 463 aagagggaatcttcctctgggctcccatattcgtcctctgagtcttcctctgagtcttct 404

                           
Query: 374 tctaaagtaccatatt 389
           |||||||| |||||||
Sbjct: 403 tctaaagtcccatatt 388



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                               
Query: 428 tctgagtcttcttctaaagttccatattcgtcctct 463
           |||||||||||||||||||| |||||||||| ||||
Sbjct: 415 tctgagtcttcttctaaagtcccatattcgttctct 380



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 66/79 (83%)
 Strand = Plus / Minus

                                                                       
Query: 450 catattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgagt 509
           |||||||||||||| ||||| |||||| |   ||| || || ||||||| ||||||||||
Sbjct: 168 catattcgtcctctcgggtcttatattcgtcttctaggctctcatattcttcttctgagt 109

                              
Query: 510 ctttctctaaagtcctata 528
           ||| ||||  |||||||||
Sbjct: 108 cttcctctcgagtcctata 90



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 503 tctgagtctttctctaaagtcctatattcgttctctg 539
           ||||||||||  |||||||||| ||||||||||||||
Sbjct: 415 tctgagtcttcttctaaagtcccatattcgttctctg 379



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| |||||| |||||| ||||| | | | |||||||| |||| || ||  ||
Sbjct: 363 tcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggtcttat 304

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| | |||||||||||||||
Sbjct: 303 attggttctttgggctcccatattc 279



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                      
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           ||||||| |||||||||||||| |||  ||| | ||| || |||||| |||||||||||
Sbjct: 126 catattcttcttctgagtcttcctctcgagtcctatactcttcctctagggtcctatat 68



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                 
Query: 410 gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctct 463
           ||||| |||||||| || ||||||||||  |||| ||| | |||||||||||||
Sbjct: 292 gggctcccatattcttcctctgagtctttctctagagtcctatattcgtcctct 239



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| ||||||||||| |||||||||||
Sbjct: 445 gggctcccatattcgtcctctgagtcttc 417



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 356 tcttcttctgagtcttcctct 376
           |||||||||||||||||||||
Sbjct: 121 tcttcttctgagtcttcctct 101



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 327 catattcgtcctctcgggtc 308



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| || |||||||||| | || |||||||||||||
Sbjct: 285 catattcttcctctgagtctttctctagagtcctatattc 246
to top
>gb|U95128.1|PAU95128 Pentaschistis aspera RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 450

 Score =  129 bits (65), Expect = 1e-26
 Identities = 122/141 (86%)
 Strand = Plus / Minus

                                                                       
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcc 470
           |||| |||||||| || ||| ||||||| |||| | |||||||||| |||||| ||||| 
Sbjct: 341 ggctcccatattcttcctctaagtcttcctctagaattccatattcatcctctcgggtct 282

                                                                       
Query: 471 tatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||| | |||||||| |||||||||| || |||||||||||||||| |||||||||||
Sbjct: 281 tatattcgttctctgggctcccatattcttcctctgagtctttctctagagtcctatatt 222

                                
Query: 531 cgttctctgggttcccatatt 551
           ||| |||| || |||||||||
Sbjct: 221 cgtcctctaggatcccatatt 201



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 59/66 (89%)
 Strand = Plus / Minus

                                                                       
Query: 324 cttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtac 383
           |||||||||||||  | |||||||||||||||||||| || |||||||| |||||||| |
Sbjct: 428 cttcctctgggcttccatattcgtcctctgagtcttcctcagagtcttcttctaaagtcc 369

                 
Query: 384 catatt 389
           ||||||
Sbjct: 368 catatt 363



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 78/93 (83%), Gaps = 1/93 (1%)
 Strand = Plus / Minus

                                                                       
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
           ||||||| || |||||||||||||||||  | ||  ||||| || ||||| | |||||||
Sbjct: 156 tcttctagggcttcatattcgtcctctcccggcccatattc-gttttctaggctctcata 98

                                            
Query: 686 ttcctcttctgagtcttccgctcgagtcctata 718
           |||||  ||||| |||||| |||||||||||||
Sbjct: 97  ttcctgctctgattcttcctctcgagtcctata 65



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 431 gagtcttcttctaaagttccatattcgtcctct 463
           ||||||||||||||||| |||||||||| ||||
Sbjct: 387 gagtcttcttctaaagtcccatattcgttctct 355



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 565 cccatattcgttttctagggtttcatattcgt 596
           ||||||||||| |||||||| |||||||||||
Sbjct: 166 cccatattcgtcttctagggcttcatattcgt 135



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 56/67 (83%)
 Strand = Plus / Minus

                                                                       
Query: 410 gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtc 469
           ||||| |||||||| || ||||||||||  |||| ||| | ||||||||||||| || ||
Sbjct: 267 gggctcccatattcttcctctgagtctttctctagagtcctatattcgtcctctaggatc 208

                  
Query: 470 ctatatt 476
           | |||||
Sbjct: 207 ccatatt 201



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 506 gagtctttctctaaagtcctatattcgttctctg 539
           |||||||  |||||||||| ||||||||||||||
Sbjct: 387 gagtcttcttctaaagtcccatattcgttctctg 354



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 565 cccatattcgttttctagggtttcatattc 594
           ||||||||||||||||||| | ||||||||
Sbjct: 124 cccatattcgttttctaggctctcatattc 95



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| ||||||||||| |||||||||||
Sbjct: 420 gggcttccatattcgtcctctgagtcttc 392



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 69/85 (81%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| || ||| |||||| ||||| | | | |||||| | |||| || ||  ||
Sbjct: 338 tcccatattcttcctctaagtcttcctctagaattccatattcatcctctcgggtcttat 279

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| |||||||||||||||||
Sbjct: 278 attcgttctctgggctcccatattc 254



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| | ||||| |||||||||||||
Sbjct: 271 ctctgggctcccatattcttcctctgagtctt 240



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| || |||||||||| | || |||||||||||||
Sbjct: 260 catattcttcctctgagtctttctctagagtcctatattc 221
to top
>gb|U95077.1|MRU95077 Merxmuellera rangei RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 458

 Score =  129 bits (65), Expect = 1e-26
 Identities = 122/141 (86%)
 Strand = Plus / Minus

                                                                       
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcc 470
           ||||||||||  | |||||||||||||| |||| ||||||||||||||||||| ||||| 
Sbjct: 367 ggctgccatacccttcttctgagtcttcctctagagttccatattcgtcctctcgggtct 308

                                                                       
Query: 471 tatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||| | | || ||| |||||||||| || |||||||||||||||| |||||||||||
Sbjct: 307 tatattcgttttccgggctcccatattcttcctctgagtctttctctagagtcctatatt 248

                                
Query: 531 cgttctctgggttcccatatt 551
           |||  ||| || |||||||||
Sbjct: 247 cgtcttctaggatcccatatt 227



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 64/70 (91%)
 Strand = Plus / Minus

                                                                       
Query: 320 gaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaa 379
           ||||||||||||| |||| | |||||||||||||||||||||||||||||||| ||||||
Sbjct: 458 gaatcttcctctgagctcccatattcgtcctctgagtcttcttctgagtcttcttctaaa 399

                     
Query: 380 gtaccatatt 389
           |  |||||||
Sbjct: 398 gccccatatt 389



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 79/92 (85%), Gaps = 4/92 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           ||||||||||||||||| ||||||| |   ||||||| ||||||||||||||||||| | 
Sbjct: 251 tattcgtcttctaggatcccatattca---tcttctagggtttcatattcgtcctctaga 195

                                           
Query: 656 gtcctgtattccgtgttctanggtctcatatt 687
           ||||| |||| ||| ||||| ||| |||||||
Sbjct: 194 gtcctatatt-cgtcttctagggtttcatatt 164



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 78/92 (84%)
 Strand = Plus / Minus

                                                                       
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatttgctctctgggttcccatat 496
           |||||||  ||| |||||| ||| ||| |||||||||||| | |||||||| || |||||
Sbjct: 182 tcttctagggtttcatatttgtcgtctcgggtcctatattcgttctctgggctctcatat 123

                                           
Query: 497 tcctcttctgagtctttctctaaagtcctata 528
           || || |||||||||| ||||| |||||||||
Sbjct: 122 tcttcctctgagtcttcctctagagtcctata 91



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 79/93 (84%), Gaps = 1/93 (1%)
 Strand = Plus / Minus

                                                                       
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
           ||||||| ||||||||||| ||| ||||||||||| |||| |||  |||  | |||||||
Sbjct: 182 tcttctagggtttcatatttgtcgtctcgggtcctatatt-cgttctctgggctctcata 124

                                            
Query: 686 ttcctcttctgagtcttccgctcgagtcctata 718
           ||| || |||||||||||| || ||||||||||
Sbjct: 123 ttcttcctctgagtcttcctctagagtcctata 91



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 63/74 (85%)
 Strand = Plus / Minus

                                                                       
Query: 500 tcttctgagtctttctctaaagtcctatattcgttctctgggttcccatatttgttttct 559
           ||||||||||||| ||||| ||| | |||||||| |||| || ||  ||||| |||||| 
Sbjct: 353 tcttctgagtcttcctctagagttccatattcgtcctctcgggtcttatattcgttttcc 294

                         
Query: 560 gggctcccatattc 573
           ||||||||||||||
Sbjct: 293 gggctcccatattc 280



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 425 tcttctgagtcttcttctaaagttccatattcgtcctct 463
           ||||||||||||||||||||||  |||||||||| ||||
Sbjct: 419 tcttctgagtcttcttctaaagccccatattcgttctct 381



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                             
Query: 547 atatttgttttctgggctcccatattcgttttctagggtttcatattcgt 596
           ||||| || |||| || |||||||||| | ||||||||||||||||||||
Sbjct: 252 atattcgtcttctaggatcccatattcatcttctagggtttcatattcgt 203



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 357 cttcttctgagtcttcctctaaagtaccatatt 389
           ||||||||||||||||||||| ||| |||||||
Sbjct: 355 cttcttctgagtcttcctctagagttccatatt 323



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| ||||| ||||||||||||||
Sbjct: 138 ctctgggctctcatattcttcctctgagtcttc 106



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 500 tcttctgagtctttctctaaagtcctatattcgttctctg 539
           |||||||||||||  ||||||| || ||||||||||||||
Sbjct: 419 tcttctgagtcttcttctaaagccccatattcgttctctg 380



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 69/83 (83%), Gaps = 1/83 (1%)
 Strand = Plus / Minus

                                                                       
Query: 639 catattcgtcctctcgggtcctgtattccgtgttctanggtctcatattcctcttctgag 698
           |||||||||||||||||||| | |||| ||| |||   | || ||||||| || ||||||
Sbjct: 328 catattcgtcctctcgggtcttatatt-cgttttccgggctcccatattcttcctctgag 270

                                  
Query: 699 tcttccgctcgagtcctatattc 721
           |||| | || |||||||||||||
Sbjct: 269 tctttctctagagtcctatattc 247



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 416 ccatattcgtcttctgagtcttcttct 442
           ||||||||||| |||||||||||||||
Sbjct: 440 ccatattcgtcctctgagtcttcttct 414



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 521 gtcctatattcgttctctgggttcccatatt 551
           ||||||||||||||||||||| || ||||||
Sbjct: 152 gtcctatattcgttctctgggctctcatatt 122



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 568 atattcgttttctagggtttcatatt 593
           |||||||| |||||||||||||||||
Sbjct: 189 atattcgtcttctagggtttcatatt 164



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 224 tcttctagggtttcatattcgtcctctagagtcctatatt 185



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                       
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatt 476
           ||||||| || ||||||||||| |||| ||| | ||| || |||||| |||||| |||||
Sbjct: 127 catattcttcctctgagtcttcctctagagtcctatactcttcctctcgggtccgatatt 68
to top
>gb|U93361.1|DSU93361 Danthonia secundiflora RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 521

 Score =  129 bits (65), Expect = 1e-26
 Identities = 128/149 (85%)
 Strand = Plus / Minus

                                                                       
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcc 470
           |||| |||||||| |||||| ||||||| |||| | ||||||||||||||||| ||||| 
Sbjct: 414 ggctcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggtct 355

                                                                       
Query: 471 tatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||| | |||| ||| |||||||||| || || ||||||||||||| |||||||||||
Sbjct: 354 tatattggttctcagggctcccatattcttcctcggagtctttctctagagtcctatatt 295

                                        
Query: 531 cgttctctgggttcccatatttgttttct 559
           ||| |||| || |||| ||||||| ||||
Sbjct: 294 cgtcctctaggatcccgtatttgtcttct 266



 Score =  103 bits (52), Expect = 8e-19
 Identities = 70/76 (92%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           |||| ||||||||||||||||||| | |||||||||||||||||||| ||||||||||| 
Sbjct: 511 aagagggaatcttcctctgggctcccatattcgtcctctgagtcttcctctgagtcttct 452

                           
Query: 374 tctaaagtaccatatt 389
           |||||||| |||||||
Sbjct: 451 tctaaagtcccatatt 436



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                           
Query: 671 ttctanggtctcatattcctcttctgagtcttccgctcgagtcctata 718
           ||||| | |||||||||| ||||||||||||||| |||||||||||||
Sbjct: 137 ttctaggctctcatattcttcttctgagtcttcctctcgagtcctata 90



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                               
Query: 428 tctgagtcttcttctaaagttccatattcgtcctct 463
           |||||||||||||||||||| |||||||||| ||||
Sbjct: 463 tctgagtcttcttctaaagtcccatattcgttctct 428



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 54/63 (85%), Gaps = 3/63 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |   ||||||  ||||||||||||||| ||||||
Sbjct: 256 tattcgtcctctaggatcccatattca---tcttctcgggtttcatattcgtcttctcgg 200

              
Query: 656 gtc 658
           |||
Sbjct: 199 gtc 197



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 503 tctgagtctttctctaaagtcctatattcgttctctg 539
           ||||||||||  |||||||||| ||||||||||||||
Sbjct: 463 tctgagtcttcttctaaagtcccatattcgttctctg 427



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| |||||| |||||| ||||| | | | |||||||| |||| || ||  ||
Sbjct: 411 tcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggtcttat 352

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| || ||||||||||||||
Sbjct: 351 attggttctcagggctcccatattc 327



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 626 tcttctanggtttcatattcgtcctct 652
           ||||||| |||||||||||||||||||
Sbjct: 271 tcttctagggtttcatattcgtcctct 245



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                      
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           ||||||| |||||||||||||| |||  ||| | ||| || |||||| |||||||||||
Sbjct: 126 catattcttcttctgagtcttcctctcgagtcctatactcttcctctagggtcctatat 68



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| ||||||||||| |||||||||||
Sbjct: 493 gggctcccatattcgtcctctgagtcttc 465



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | |||| |||||||||||||||
Sbjct: 240 tcccatattcatcttctcgggtttcatattcgt 208



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 356 tcttcttctgagtcttcctct 376
           |||||||||||||||||||||
Sbjct: 121 tcttcttctgagtcttcctct 101



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 492 catattcctcttctgagtctttctctaaagtcctata 528
           ||||||| ||||||||||||| ||||  |||||||||
Sbjct: 126 catattcttcttctgagtcttcctctcgagtcctata 90



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 375 catattcgtcctctcgggtc 356
to top
>gb|U93360.1|CSU93360 Cortaderia selloana RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 503

 Score =  129 bits (65), Expect = 1e-26
 Identities = 122/141 (86%)
 Strand = Plus / Minus

                                                                       
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcc 470
           |||| |||||||| |||||| ||||||| |||| | ||||||||||||||||| ||||| 
Sbjct: 394 ggctcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggtct 335

                                                                       
Query: 471 tatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||| | ||| |||| |||||||||| || |||||||||||||||| |||||||||||
Sbjct: 334 tatattggttctttgggctcccatattcttcctctgagtctttctctagagtcctatatt 275

                                
Query: 531 cgttctctgggttcccatatt 551
           ||| |||| || |||| ||||
Sbjct: 274 cgtcctctaggatcccgtatt 254



 Score =  103 bits (52), Expect = 8e-19
 Identities = 70/76 (92%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           |||| ||||||||||||||||||| | |||||||||||||||||||| ||||||||||| 
Sbjct: 491 aagagggaatcttcctctgggctcccatattcgtcctctgagtcttcctctgagtcttct 432

                           
Query: 374 tctaaagtaccatatt 389
           |||||||| |||||||
Sbjct: 431 tctaaagtcccatatt 416



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 72/81 (88%), Gaps = 1/81 (1%)
 Strand = Plus / Minus

                                                                       
Query: 638 tcatattcgtcctctcgggtcctgtattccgtgttctanggtctcatattcctcttctga 697
           |||||||| |||||||||||| | ||||| || ||||| | |||||||||| ||||||||
Sbjct: 155 tcatattcttcctctcgggtcttatattc-gtcttctaggctctcatattcttcttctga 97

                                
Query: 698 gtcttccgctcgagtcctata 718
           ||||||| |||||||||||||
Sbjct: 96  gtcttcctctcgagtcctata 76



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 103/125 (82%), Gaps = 10/125 (8%)
 Strand = Plus / Minus

                                                                       
Query: 564 tcccatattcgttttctagggtttcatattcgtattcgtcttctaggattccatatttag 623
           |||| ||||||| ||||||||||||||||||||      | |||||||| ||||||| | 
Sbjct: 262 tcccgtattcgtcttctagggtttcatattcgt------cctctaggatcccatattca- 210

                                                                       
Query: 624 attcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctca 683
             ||||||  ||||||||||||||||||||||||| | |||| ||| ||||| | |||||
Sbjct: 209 --tcttctcgggtttcatattcgtcctctcgggtcttatatt-cgttttctaggctctca 153

                
Query: 684 tattc 688
           |||||
Sbjct: 152 tattc 148



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                               
Query: 428 tctgagtcttcttctaaagttccatattcgtcctct 463
           |||||||||||||||||||| |||||||||| ||||
Sbjct: 443 tctgagtcttcttctaaagtcccatattcgttctct 408



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 503 tctgagtctttctctaaagtcctatattcgttctctg 539
           ||||||||||  |||||||||| ||||||||||||||
Sbjct: 443 tctgagtcttcttctaaagtcccatattcgttctctg 407



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| |||||| |||||| ||||| | | | |||||||| |||| || ||  ||
Sbjct: 391 tcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggtcttat 332

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| | |||||||||||||||
Sbjct: 331 attggttctttgggctcccatattc 307



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 65/79 (82%)
 Strand = Plus / Minus

                                                                       
Query: 450 catattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgagt 509
           ||||||| |||||| ||||| |||||| |   ||| || || ||||||| ||||||||||
Sbjct: 154 catattcttcctctcgggtcttatattcgtcttctaggctctcatattcttcttctgagt 95

                              
Query: 510 ctttctctaaagtcctata 528
           ||| ||||  |||||||||
Sbjct: 94  cttcctctcgagtcctata 76



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                      
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           ||||||| |||||||||||||| |||  ||| | ||| || |||||| |||||||||||
Sbjct: 112 catattcttcttctgagtcttcctctcgagtcctatactcttcctctagggtcctatat 54



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                 
Query: 410 gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctct 463
           ||||| |||||||| || ||||||||||  |||| ||| | |||||||||||||
Sbjct: 320 gggctcccatattcttcctctgagtctttctctagagtcctatattcgtcctct 267



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| ||||||||||| |||||||||||
Sbjct: 473 gggctcccatattcgtcctctgagtcttc 445



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 356 tcttcttctgagtcttcctct 376
           |||||||||||||||||||||
Sbjct: 107 tcttcttctgagtcttcctct 87



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 355 catattcgtcctctcgggtc 336



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| || |||||||||| | || |||||||||||||
Sbjct: 313 catattcttcctctgagtctttctctagagtcctatattc 274
to top
>gb|AY174482.1| Ichnanthus pallens DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 520

 Score =  127 bits (64), Expect = 5e-26
 Identities = 103/116 (88%)
 Strand = Plus / Minus

                                                                       
Query: 416 ccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           |||||||| |||||||||||||| |||| ||||||||||||||||||| ||||| |||||
Sbjct: 393 ccatattcttcttctgagtcttcctctagagttccatattcgtcctctcgggtcttatat 334

                                                                   
Query: 476 ttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattc 531
           | | |||||||| | || ||||| || |||||||||||||||| ||||||||||||
Sbjct: 333 tcgttctctgggctaccgtattcttcctctgagtctttctctagagtcctatattc 278



 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 86/101 (85%)
 Strand = Plus / Minus

                                                                       
Query: 289 atgctcaatcaaaccctcnnnnnnnaagatggaatcttcctctgggctctcgtattcgtc 348
           ||||||||| ||||||||       ||||||||||||||||| |||||| | ||||||||
Sbjct: 520 atgctcaatnaaaccctcttttgagaagatggaatcttcctccgggctcccatattcgtc 461

                                                    
Query: 349 ctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
            ||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 460 ttctgagtcttcctctgagtcttcttctaaagtcccatatt 420



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||| | |||||||| || ||||||| || |||||||||| |||| 
Sbjct: 206 cctctcgggtcctatattcgttctctgggctctcatattcatcctctgagtcttcctctc 147

                     
Query: 519 aagtcctata 528
            |||||||||
Sbjct: 146 gagtcctata 137



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 71/85 (83%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| ||||||||||||| ||||| ||| | |||||||| |||| || ||  ||
Sbjct: 395 tcccatattcttcttctgagtcttcctctagagttccatattcgtcctctcgggtcttat 336

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| |||||||| || |||||
Sbjct: 335 attcgttctctgggctaccgtattc 311



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 61/71 (85%), Gaps = 1/71 (1%)
 Strand = Plus / Minus

                                                                       
Query: 648 cctctcgggtcctgtattccgtgttctanggtctcatattcctcttctgagtcttccgct 707
           ||||||||||||| |||| |||  |||  | |||||||||| || |||||||||||| ||
Sbjct: 206 cctctcgggtcctatatt-cgttctctgggctctcatattcatcctctgagtcttcctct 148

                      
Query: 708 cgagtcctata 718
           |||||||||||
Sbjct: 147 cgagtcctata 137



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 356 tcttcttctgagtcttcctctaaagtaccatatt 389
           |||||||||||||||||||||| ||| |||||||
Sbjct: 387 tcttcttctgagtcttcctctagagttccatatt 354



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattc 666
           ||||||| ||||||||||||||||||| | ||||| |||||
Sbjct: 276 tcttctagggtttcatattcgtcctctagagtcctatattc 236



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| |||||||||||||||||||||||
Sbjct: 477 gggctcccatattcgtcttctgagtcttc 449



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 447 tctgagtcttcttctaaagtcccatattc 419



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| ||||| ||||||||||||||
Sbjct: 184 ctctgggctctcatattcatcctctgagtcttc 152



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 521 gtcctatattcgttctctgggttcccatatt 551
           ||||||||||||||||||||| || ||||||
Sbjct: 198 gtcctatattcgttctctgggctctcatatt 168



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 489 tcccatattcctcttctgagtctttctct 517
           |||||||||| ||||||||||||| ||||
Sbjct: 473 tcccatattcgtcttctgagtcttcctct 445



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 568 atattcgttttctagggtttcatattcgt 596
           |||||| | ||||||||||||||||||||
Sbjct: 283 atattcatcttctagggtttcatattcgt 255



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 596 tattcgtcttctaggattccatatt 620
           |||||||||||||||||| ||||||
Sbjct: 240 tattcgtcttctaggatttcatatt 216



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| ||||||||||||||| || |||| | ||||||
Sbjct: 392 catattcttcttctgagtcttcctctagagttccatattc 353



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 359 catattcgtcctctcgggtc 340



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||  ||||||| |||||||||||||
Sbjct: 328 ctctgggctaccgtattcttcctctgagtctt 297



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 276 tcttctagggtttcatattcgtcctctagagtcctatatt 237
to top
>gb|AF355995.1| Cortaderia turbaria RNA polymerase beta-subunit (rpoC2) gene,
           partial cds; chloroplast gene for chloroplast product
          Length = 480

 Score =  127 bits (64), Expect = 5e-26
 Identities = 154/184 (83%)
 Strand = Plus / Minus

                                                                       
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcc 470
           |||| |||||||| |||||| ||||||| |||| | ||||||||||||||||| ||||| 
Sbjct: 366 ggctcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggtct 307

                                                                       
Query: 471 tatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||| | |||| ||| |||||||||| || |||||||||||||||| ||||| |||||
Sbjct: 306 tatattggttctcagggctcccatattcttcctctgagtctttctctagagtccgatatt 247

                                                                       
Query: 531 cgttctctgggttcccatatttgttttctgggctcccatattcgttttctagggtttcat 590
            || |||| || |||| ||||||| |||| || |  ||||||||| |||| |||| | ||
Sbjct: 246 tgtcctctaggatcccgtatttgtcttctagggtttcatattcgtcttctcgggtcttat 187

               
Query: 591 attc 594
           ||||
Sbjct: 186 attc 183



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 60/66 (90%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           |||| ||||||||||||||||||| | |||||||||||||||||||  ||||||||||| 
Sbjct: 463 aagagggaatcttcctctgggctcccatattcgtcctctgagtctttctctgagtcttct 404

                 
Query: 374 tctaaa 379
           ||||||
Sbjct: 403 tctaaa 398



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 72/81 (88%), Gaps = 1/81 (1%)
 Strand = Plus / Minus

                                                                       
Query: 638 tcatattcgtcctctcgggtcctgtattccgtgttctanggtctcatattcctcttctga 697
           |||||||| |||||||||||| | ||||| || ||||| | |||||||||| ||||||||
Sbjct: 169 tcatattcttcctctcgggtcttatattc-gtcttctaggctctcatattcttcttctga 111

                                
Query: 698 gtcttccgctcgagtcctata 718
           ||||||| |||||||||||||
Sbjct: 110 gtcttcctctcgagtcctata 90



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 626 tcttctanggtttcatattcgtcctctcgggtc 658
           ||||||| ||||||||||||||| |||||||||
Sbjct: 223 tcttctagggtttcatattcgtcttctcgggtc 191



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 481 ctctgggttcccatattcctcttctgagtctttctct 517
           ||||||| |||||||||| || |||||||||||||||
Sbjct: 449 ctctgggctcccatattcgtcctctgagtctttctct 413



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 428 tctgagtcttcttctaaagttccatattcgtcctct 463
           |||||||||||||||||| || ||||||||| ||||
Sbjct: 415 tctgagtcttcttctaaaattgcatattcgttctct 380



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 65/79 (82%)
 Strand = Plus / Minus

                                                                       
Query: 450 catattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgagt 509
           ||||||| |||||| ||||| |||||| |   ||| || || ||||||| ||||||||||
Sbjct: 168 catattcttcctctcgggtcttatattcgtcttctaggctctcatattcttcttctgagt 109

                              
Query: 510 ctttctctaaagtcctata 528
           ||| ||||  |||||||||
Sbjct: 108 cttcctctcgagtcctata 90



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                      
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           ||||||| |||||||||||||| |||  ||| | ||| || |||||| |||||||||||
Sbjct: 126 catattcttcttctgagtcttcctctcgagtcctatactcttcctctagggtcctatat 68



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 547 atatttgttttctgggctcccatattcgttttctagggtttcatattcgt 596
           ||||||||  ||| || |||| |||| || ||||||||||||||||||||
Sbjct: 251 atatttgtcctctaggatcccgtatttgtcttctagggtttcatattcgt 202



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 356 tcttcttctgagtcttcctct 376
           |||||||||||||||||||||
Sbjct: 121 tcttcttctgagtcttcctct 101



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 410 gggctgccatattcgtcttctgagtctt 437
           ||||| ||||||||||| ||||||||||
Sbjct: 445 gggctcccatattcgtcctctgagtctt 418



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 327 catattcgtcctctcgggtc 308
to top
>gb|AF372210.1| Thrasya glaziovii DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 550

 Score =  127 bits (64), Expect = 5e-26
 Identities = 118/136 (86%)
 Strand = Plus / Minus

                                                                       
Query: 416 ccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           |||||||| |||||||||||||| |||| | ||||||||||||||||| ||||| |||||
Sbjct: 467 ccatattcttcttctgagtcttcctctagacttccatattcgtcctctcgggtcttatat 408

                                                                       
Query: 476 ttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttc 535
           | | |||||||| |||| ||||| || |||||||||||||||| ||| ||||||||||  
Sbjct: 407 tcgttctctgggctcccgtattcttcctctgagtctttctctagagtgctatattcgtcg 348

                           
Query: 536 tctgggttcccatatt 551
           ||| || |||||||||
Sbjct: 347 tctaggatcccatatt 332



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                            
Query: 341 tattcgtcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           |||||||| ||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 542 tattcgtcttctgagtcttcctctgagtcttcttctaaagtcccatatt 494



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 61/71 (85%), Gaps = 3/71 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |   ||||||| ||||||||||||||||||| | 
Sbjct: 356 tattcgtcgtctaggatcccatattca---tcttctagggtttcatattcgtcctctaga 300

                      
Query: 656 gtcctgtattc 666
           ||||| |||||
Sbjct: 299 gtcctatattc 289



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||| | |||||||| || ||||||| || |||||||||| |||| 
Sbjct: 259 cctctcgggtcctatattcgttctctgggctctcatattcatcctctgagtcttcctctc 200

                     
Query: 519 aagtcctata 528
            |||||||||
Sbjct: 199 gagtcctata 190



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 71/85 (83%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| ||||||||||||| ||||| | | | |||||||| |||| || ||  ||
Sbjct: 469 tcccatattcttcttctgagtcttcctctagacttccatattcgtcctctcgggtcttat 410

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| ||||||||||| |||||
Sbjct: 409 attcgttctctgggctcccgtattc 385



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 61/71 (85%), Gaps = 1/71 (1%)
 Strand = Plus / Minus

                                                                       
Query: 648 cctctcgggtcctgtattccgtgttctanggtctcatattcctcttctgagtcttccgct 707
           ||||||||||||| |||| |||  |||  | |||||||||| || |||||||||||| ||
Sbjct: 259 cctctcgggtcctatatt-cgttctctgggctctcatattcatcctctgagtcttcctct 201

                      
Query: 708 cgagtcctata 718
           |||||||||||
Sbjct: 200 cgagtcctata 190



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 521 tctgagtcttcttctaaagtcccatattc 493



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 340 tcccatattcatcttctagggtttcatattcgt 308



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| ||||| ||||||||||||||
Sbjct: 237 ctctgggctctcatattcatcctctgagtcttc 205



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 411 ggctgccatattcgtcttctgagtcttc 438
           |||| |||||||||||||||||||||||
Sbjct: 550 ggctcccatattcgtcttctgagtcttc 523



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| ||||||| |||||||||||||
Sbjct: 402 ctctgggctcccgtattcttcctctgagtctt 371



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 521 gtcctatattcgttctctgggttcccatatt 551
           ||||||||||||||||||||| || ||||||
Sbjct: 251 gtcctatattcgttctctgggctctcatatt 221



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 356 tcttcttctgagtcttcctcta 377
           ||||||||||||||||||||||
Sbjct: 461 tcttcttctgagtcttcctcta 440



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 489 tcccatattcctcttctgagtctttctct 517
           |||||||||| ||||||||||||| ||||
Sbjct: 547 tcccatattcgtcttctgagtcttcctct 519



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 596 tattcgtcttctaggattccatatt 620
           |||||||||||||||||| ||||||
Sbjct: 293 tattcgtcttctaggatttcatatt 269



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 433 catattcgtcctctcgggtc 414



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 329 tcttctagggtttcatattcgtcctctagagtcctatatt 290



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 568 atattcgttttctagggtttcatattcg 595
           |||||||| ||||||| |||||||||||
Sbjct: 294 atattcgtcttctaggatttcatattcg 267
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>gb|AF372190.1| Paspalidium geminatum DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 578

 Score =  127 bits (64), Expect = 5e-26
 Identities = 107/124 (86%)
 Strand = Plus / Minus

                                                                       
Query: 266 agactaaattcttttgttcctcgatgctcaatcaaaccctcnnnnnnnaagatggaatct 325
           |||||||||||||||||||||| ||||||||| |||| |||       ||||||||||||
Sbjct: 578 agactaaattcttttgttcctcnatgctcaataaaactctctttgattaagatggaatct 519

                                                                       
Query: 326 tcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtacca 385
           ||||| |||||| | |||||||| ||||||||||| ||||||||||| |||||||| |||
Sbjct: 518 tcctccgggctcccatattcgtcttctgagtcttcctctgagtcttcttctaaagtccca 459

               
Query: 386 tatt 389
           ||||
Sbjct: 458 tatt 455



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 79/93 (84%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| ||||| |||||| | |||||||| |||| ||||| || ||||||||||||||||
Sbjct: 358 cctctcgggtcttatattcgttctctgggctcccgtattcttcctctgagtctttctcta 299

                                            
Query: 519 aagtcctatattcgttctctgggttcccatatt 551
            || || |||||||| |||| || |||||||||
Sbjct: 298 gaggcccatattcgtcctctaggatcccatatt 266



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                     
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||||||| ||||||||||||| ||||| |||||||||||
Sbjct: 430 tcccatattcttcttctgagtcttcctctagagtcctatatt 389



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||| | |||||||| |||| ||||| || |||||||||| |||| 
Sbjct: 193 cctctcgggtcctatattcgttctctgggctcccgtattcgtcctctgagtcttcctctc 134

                     
Query: 519 aagtcctata 528
            |||||||||
Sbjct: 133 gagtcctata 124



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||| ||||||||||||||||||||||
Sbjct: 171 ctctgggctcccgtattcgtcctctgagtcttc 139



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 682 catattcctcttctgagtcttccgctcgagtcctatatt 720
           ||||||| ||||||||||||||| || ||||||||||||
Sbjct: 427 catattcttcttctgagtcttcctctagagtcctatatt 389



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| |||||||||||||||||||||||
Sbjct: 512 gggctcccatattcgtcttctgagtcttc 484



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 482 tctgagtcttcttctaaagtcccatattc 454



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 274 tcccatattcatcttctagggtttcatattcgt 242



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 59/70 (84%), Gaps = 3/70 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |   ||||||| ||||||||||||||| ||| | 
Sbjct: 290 tattcgtcctctaggatcccatattca---tcttctagggtttcatattcgtcttctaga 234

                     
Query: 656 gtcctgtatt 665
           ||||| ||||
Sbjct: 233 gtcctatatt 224



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| ||||||| |||||||||||||
Sbjct: 336 ctctgggctcccgtattcttcctctgagtctt 305



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 356 tcttcttctgagtcttcctctaaagtaccatattt 390
           |||||||||||||||||||||| ||| | ||||||
Sbjct: 422 tcttcttctgagtcttcctctagagtcctatattt 388



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 521 gtcctatattcgttctctgggttcccatatt 551
           ||||||||||||||||||||| |||| ||||
Sbjct: 185 gtcctatattcgttctctgggctcccgtatt 155



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 684 tattcctcttctgagtcttccgctcgagtcctata 718
           ||||| || |||||||||||| |||||||||||||
Sbjct: 158 tattcgtcctctgagtcttcctctcgagtcctata 124



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 489 tcccatattcctcttctgagtctttctct 517
           |||||||||| ||||||||||||| ||||
Sbjct: 508 tcccatattcgtcttctgagtcttcctct 480



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 416 ccatattcgtcttctgagtcttcttcta 443
           |||||||| |||||||||||||| ||||
Sbjct: 428 ccatattcttcttctgagtcttcctcta 401
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>gb|U94391.1|DPU94391 Dregeochloa pumilla RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 440

 Score =  127 bits (64), Expect = 5e-26
 Identities = 118/136 (86%)
 Strand = Plus / Minus

                                                                       
Query: 416 ccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           |||||||| |||||||||||||| |||| ||||| ||||||||||||| ||||| |||||
Sbjct: 331 ccatattcttcttctgagtcttcctctagagttctatattcgtcctctcgggtcttatat 272

                                                                       
Query: 476 ttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttc 535
           | | ||||| || |||| ||||| || |||||||||||||||| |||||||||||||| |
Sbjct: 271 tcgttctctaggctcccgtattcttcctctgagtctttctctatagtcctatattcgtcc 212

                           
Query: 536 tctgggttcccatatt 551
           ||| |  |||||||||
Sbjct: 211 tctagagtcccatatt 196



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 69/76 (90%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           ||||| |||||||| || |||||| | |||||||||||||||||||||||||||||||| 
Sbjct: 433 aagatagaatcttcttcggggctcccatattcgtcctctgagtcttcttctgagtcttct 374

                           
Query: 374 tctaaagtaccatatt 389
           |||||||| |||||||
Sbjct: 373 tctaaagtcccatatt 358



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 76/89 (85%)
 Strand = Plus / Minus

                                                                       
Query: 485 gggttcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttc 544
           |||||||||||||| ||||||||||||| ||||| ||| |||||||||| |||| || ||
Sbjct: 337 gggttcccatattcttcttctgagtcttcctctagagttctatattcgtcctctcgggtc 278

                                        
Query: 545 ccatatttgttttctgggctcccatattc 573
             ||||| ||| ||| ||||||| |||||
Sbjct: 277 ttatattcgttctctaggctcccgtattc 249



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                  
Query: 425 tcttctgagtcttcttctaaagttccatattcgtcctct 463
           ||||||||||||||||||||||| |||||||||| ||||
Sbjct: 388 tcttctgagtcttcttctaaagtcccatattcgttctct 350



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||||| ||||||||||||||||||||
Sbjct: 204 tcccatattcgtcttctagggtttcatattcgt 172



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 500 tcttctgagtctttctctaaagtcctatattcgttctctg 539
           |||||||||||||  |||||||||| ||||||||||||||
Sbjct: 388 tcttctgagtcttcttctaaagtcccatattcgttctctg 349



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 408 cggggctgccatattcgtcttctgagtcttcttct 442
           ||||||| ||||||||||| |||||||||||||||
Sbjct: 417 cggggctcccatattcgtcctctgagtcttcttct 383



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| ||||||||||||||| || |||| ||||||||
Sbjct: 330 catattcttcttctgagtcttcctctagagttctatattc 291



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 626 tcttctanggtttcatattcgtcctct 652
           ||||||| |||||||||||||||||||
Sbjct: 193 tcttctagggtttcatattcgtcctct 167



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 356 tcttcttctgagtcttcctcta 377
           ||||||||||||||||||||||
Sbjct: 325 tcttcttctgagtcttcctcta 304



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||| ||||| ||||||| |||||||||||||
Sbjct: 266 ctctaggctcccgtattcttcctctgagtctt 235
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>gb|U93362.1|DSU93362 Danthonia spicata RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 511

 Score =  127 bits (64), Expect = 5e-26
 Identities = 124/144 (86%)
 Strand = Plus / Minus

                                                                       
Query: 416 ccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           |||||||| |||||| ||||||| |||| | ||||||||||||||||| ||||| |||||
Sbjct: 397 ccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggtcttatat 338

                                                                       
Query: 476 ttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttc 535
           | | |||| ||| |||||||||| || || ||||||||||||| |||||||||||||| |
Sbjct: 337 tggttctcagggctcccatattcttcctcggagtctttctctagagtcctatattcgtcc 278

                                   
Query: 536 tctgggttcccatatttgttttct 559
           ||| || |||| ||||||| ||||
Sbjct: 277 tctaggatcccgtatttgtcttct 254



 Score =  103 bits (52), Expect = 8e-19
 Identities = 70/76 (92%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           |||| ||||||||||||||||||| | |||||||||||||||||||| ||||||||||| 
Sbjct: 499 aagagggaatcttcctctgggctcccatattcgtcctctgagtcttcctctgagtcttct 440

                           
Query: 374 tctaaagtaccatatt 389
           |||||||| |||||||
Sbjct: 439 tctaaagtcccatatt 424



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 72/81 (88%), Gaps = 1/81 (1%)
 Strand = Plus / Minus

                                                                       
Query: 638 tcatattcgtcctctcgggtcctgtattccgtgttctanggtctcatattcctcttctga 697
           |||||||| |||||||||||| | ||||| || ||||| | |||||||||| ||||||||
Sbjct: 163 tcatattcttcctctcgggtcttatattc-gtcttctaggctctcatattcttcttctga 105

                                
Query: 698 gtcttccgctcgagtcctata 718
           ||||||| |||||||||||||
Sbjct: 104 gtcttcctctcgagtcctata 84



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                               
Query: 428 tctgagtcttcttctaaagttccatattcgtcctct 463
           |||||||||||||||||||| |||||||||| ||||
Sbjct: 451 tctgagtcttcttctaaagtcccatattcgttctct 416



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 73/88 (82%)
 Strand = Plus / Minus

                                                                       
Query: 486 ggttcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcc 545
           ||||||||||||| |||||| |||||| ||||| | | | |||||||| |||| || || 
Sbjct: 402 ggttcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggtct 343

                                       
Query: 546 catatttgttttctgggctcccatattc 573
            ||||| ||| || ||||||||||||||
Sbjct: 342 tatattggttctcagggctcccatattc 315



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 54/63 (85%), Gaps = 3/63 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |   ||||||  ||||||||||||||| ||||||
Sbjct: 244 tattcgtcctctaggatcccatattca---tcttctcgggtttcatattcgtcttctcgg 188

              
Query: 656 gtc 658
           |||
Sbjct: 187 gtc 185



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 503 tctgagtctttctctaaagtcctatattcgttctctg 539
           ||||||||||  |||||||||| ||||||||||||||
Sbjct: 451 tctgagtcttcttctaaagtcccatattcgttctctg 415



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 626 tcttctanggtttcatattcgtcctct 652
           ||||||| |||||||||||||||||||
Sbjct: 259 tcttctagggtttcatattcgtcctct 233



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 65/79 (82%)
 Strand = Plus / Minus

                                                                       
Query: 450 catattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgagt 509
           ||||||| |||||| ||||| |||||| |   ||| || || ||||||| ||||||||||
Sbjct: 162 catattcttcctctcgggtcttatattcgtcttctaggctctcatattcttcttctgagt 103

                              
Query: 510 ctttctctaaagtcctata 528
           ||| ||||  |||||||||
Sbjct: 102 cttcctctcgagtcctata 84



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                      
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           ||||||| |||||||||||||| |||  ||| | ||| || |||||| |||||||||||
Sbjct: 120 catattcttcttctgagtcttcctctcgagtcctatactcttcctctagggtcctatat 62



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| ||||||||||| |||||||||||
Sbjct: 481 gggctcccatattcgtcctctgagtcttc 453



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | |||| |||||||||||||||
Sbjct: 228 tcccatattcatcttctcgggtttcatattcgt 196



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 356 tcttcttctgagtcttcctct 376
           |||||||||||||||||||||
Sbjct: 115 tcttcttctgagtcttcctct 95



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 363 catattcgtcctctcgggtc 344
to top
>gb|U90827.1|ACU90827 Aristida congesta subsp. barbicollis RNA polymerase beta-subunit
           (rpoC2) gene, chloroplast gene encoding chloroplast
           protein, partial cds
          Length = 459

 Score =  127 bits (64), Expect = 5e-26
 Identities = 181/220 (82%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           ||||| ||||| |||||||| ||| | ||||| || ||||||||||| ||||||| ||| 
Sbjct: 459 aagatagaatcctcctctggtctcccatattcatcttctgagtcttcctctgagtattct 400

                                                                       
Query: 374 tctaaagtaccatatttttcctcgccgctttccccggggctgccatattcgtcttctgag 433
           |||||||| |||||||  | |||   ||  ||| | ||||| |||||||| ||||||| |
Sbjct: 399 tctaaagtcccatattcgttctctgagccatcctcagggctcccatattcttcttctggg 340

                                                                       
Query: 434 tcttcttctaaagttccatattcgtcctcttgggtcctatatttgctctctgggttccca 493
           ||||| |||| ||||||||||||||  | | ||||| |||||| | |||||||| |||  
Sbjct: 339 tcttcctctagagttccatattcgttttttcgggtcttatattcgttctctgggctccgg 280

                                                   
Query: 494 tattcctcttctgagtctttctctaaagtcctatattcgt 533
           |||||||| | |||||||||||||| ||||||||||||||
Sbjct: 279 tattcctcctgtgagtctttctctagagtcctatattcgt 240



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 77/93 (82%), Gaps = 1/93 (1%)
 Strand = Plus / Minus

                                                                       
Query: 629 tctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcatattc 688
           |||| ||||||||||||||||||||||  ||  |||||| | | ||  | | ||||||||
Sbjct: 174 tctagggtttcatattcgtcctctcggaccccatattccttct-ctgggctttcatattc 116

                                            
Query: 689 ctcttctgagtcttccgctcgagtcctatattc 721
            || ||| |||||||| ||||||||||||||||
Sbjct: 115 gtcctctaagtcttcctctcgagtcctatattc 83



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 568 atattcgttttctagggtttcatattcgt 596
           |||||||| ||||||||||||||||||||
Sbjct: 247 atattcgtcttctagggtttcatattcgt 219



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 626 tcttctanggtttcatattcgtcctct 652
           ||||||| |||||||||||||||||||
Sbjct: 240 tcttctagggtttcatattcgtcctct 214



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 567 catattcgttttctagggtttcatattcgt 596
           |||||||||  |||||||||||||||||||
Sbjct: 185 catattcgtcctctagggtttcatattcgt 156



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 515 tctaaagtcctatattcgttctctg 539
           |||||||||| ||||||||||||||
Sbjct: 399 tctaaagtcccatattcgttctctg 375



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           ||||||||| || |||||||||||| |||||||
Sbjct: 133 ctctgggctttcatattcgtcctctaagtcttc 101
to top
>gb|AY174483.1| Isachne distichophylla DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 515

 Score =  123 bits (62), Expect = 9e-25
 Identities = 122/142 (85%)
 Strand = Plus / Minus

                                                                       
Query: 410 gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtc 469
           ||||| |||||||| |||||||||||||| || | | ||||||||||||||||| |||| 
Sbjct: 383 gggctcccatattcttcttctgagtcttcctccagaattccatattcgtcctctcgggtg 324

                                                                       
Query: 470 ctatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatat 529
            |||||| | |||||| | |||| ||||  ||||||||||||||||||| ||||||||||
Sbjct: 323 ttatattggttctctgagctcccgtattgttcttctgagtctttctctagagtcctatat 264

                                 
Query: 530 tcgttctctgggttcccatatt 551
           |||| |||| || |||||||||
Sbjct: 263 tcgtcctctaggatcccatatt 242



 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 52/57 (91%)
 Strand = Plus / Minus

                                                                    
Query: 320 gaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctct 376
           ||||||||||| |||||| | ||||||||||||||||| || |||||||||||||||
Sbjct: 485 gaatcttcctccgggctcccatattcgtcctctgagtcwtcctctgagtcttcctct 429



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 82/96 (85%), Gaps = 1/96 (1%)
 Strand = Plus / Minus

                                                                       
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
           ||||||| |||||||||| ||||||||||||||||||||| |||  |||  | |||||||
Sbjct: 197 tcttctagggtttcatatccgtcctctcgggtcctgtatt-cgttctctgggctctcata 139

                                               
Query: 686 ttcctcttctgagtcttccgctcgagtcctatattc 721
           ||| |  |||||||||||| |||| |||| ||||||
Sbjct: 138 ttcgttctctgagtcttcctctcgggtccgatattc 103



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                      
Query: 347 tcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           |||||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 446 tcctctgagtcttcctctgagtcttcttctaaagtcccatatt 404



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                               
Query: 428 tctgagtcttcttctaaagttccatattcgtcctct 463
           |||||||||||||||||||| |||||||||| ||||
Sbjct: 431 tctgagtcttcttctaaagtcccatattcgttctct 396



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 76/91 (83%), Gaps = 4/91 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |   ||||||| |||||||||||||| |||| | 
Sbjct: 266 tattcgtcctctaggatcccatattca---tcttctagggtttcatattcgttctctaga 210

                                          
Query: 656 gtcctgtattccgtgttctanggtctcatat 686
           ||||| |||| ||| ||||| ||| ||||||
Sbjct: 209 gtcctatatt-cgtcttctagggtttcatat 180



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 503 tctgagtctttctctaaagtcctatattcgttctctg 539
           ||||||||||  |||||||||| ||||||||||||||
Sbjct: 431 tctgagtcttcttctaaagtcccatattcgttctctg 395



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 250 tcccatattcatcttctagggtttcatattcgt 218



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| ||||||| ||||||||||||
Sbjct: 153 ctctgggctctcatattcgttctctgagtcttc 121



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 568 atattcgttttctagggtttcatat 592
           |||||||| ||||||||||||||||
Sbjct: 204 atattcgtcttctagggtttcatat 180



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 356 tcttcttctgagtcttcctc 375
           ||||||||||||||||||||
Sbjct: 371 tcttcttctgagtcttcctc 352



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 690 tcttctgagtcttccgctcgagtcctatattc 721
           ||||||||||||| | || |||||||||||||
Sbjct: 293 tcttctgagtctttctctagagtcctatattc 262



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 521 gtcctatattcgttctctgggttcccatatttgttttctg 560
           ||||| ||||||||||||||| || |||||| ||| ||||
Sbjct: 167 gtcctgtattcgttctctgggctctcatattcgttctctg 128
to top
>gb|AF372178.1| Leptocoryphium lanatum DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 646

 Score =  123 bits (62), Expect = 9e-25
 Identities = 115/133 (86%)
 Strand = Plus / Minus

                                                                       
Query: 419 tattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatttg 478
           |||||||||||||||||||| |||| ||||||||||   |||||| || || |||||| |
Sbjct: 512 tattcgtcttctgagtcttcctctanagttccatatctttcctctcggatcttatattcg 453

                                                                       
Query: 479 ctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttctct 538
            |||||||| |||| ||||| || |||||||||||||||| |||||||||||||| ||||
Sbjct: 452 ttctctgggctcccgtattcttcctctgagtctttctctagagtcctatattcgtcctct 393

                        
Query: 539 gggttcccatatt 551
            || |||||||||
Sbjct: 392 aggatcccatatt 380



 Score =  107 bits (54), Expect = 5e-20
 Identities = 95/111 (85%)
 Strand = Plus / Minus

                                                                       
Query: 279 ttgttcctcgatgctcaatcaaaccctcnnnnnnnaagatggaatcttcctctgggctct 338
           ||||||||||||||||||| ||||||||       ||||| ||||||||||| |||||| 
Sbjct: 646 ttgttcctcgatgctcaataaaaccctctttttttaagatagaatcttcctccgggctcc 587

                                                              
Query: 339 cgtattcgtcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           | |||||||| ||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 586 catattcgtcttctgagtcttcctctgagtcttcttctaaagtcccatatt 536



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                       
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatt 476
           ||||||| || ||||||||||| |||| ||||||||||||||||||| ||||| ||||||
Sbjct: 364 catattcttcctctgagtcttcctctagagttccatattcgtcctctcgggtcttatatt 305



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 359 tcttctgagtcttcctctaaagtaccatatttttcctc 396
           ||||||||||||||||||| ||| |||||| |||||||
Sbjct: 506 tcttctgagtcttcctctanagttccatatctttcctc 469



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| |||||||||||||||||||||||
Sbjct: 593 gggctcccatattcgtcttctgagtcttc 565



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 563 tctgagtcttcttctaaagtcccatattc 535



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| ||||||| |||||||||||||
Sbjct: 450 ctctgggctcccgtattcttcctctgagtctt 419



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 49/57 (85%), Gaps = 3/57 (5%)
 Strand = Plus / Minus

                                                                    
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctct 652
           |||||||| |||||||| ||||||| |   ||||||| |||||||||||| ||||||
Sbjct: 404 tattcgtcctctaggatcccatattca---tcttctagggtttcatattcttcctct 351



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 564 tcccatattcgttttctagggtttcatattc 594
           |||||||||| | ||||||||||||||||||
Sbjct: 388 tcccatattcatcttctagggtttcatattc 358



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 356 tcttcttctgagtcttcctctaaagtaccatatt 389
           ||||| |||||||||||||||| ||| |||||||
Sbjct: 359 tcttcctctgagtcttcctctagagttccatatt 326



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 451 atattcgtcctcttgggtcctatatt 476
           |||||| |||||||||||||||||||
Sbjct: 288 atattcttcctcttgggtcctatatt 263



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 489 tcccatattcctcttctgagtctttctct 517
           |||||||||| ||||||||||||| ||||
Sbjct: 589 tcccatattcgtcttctgagtcttcctct 561



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 43/51 (84%)
 Strand = Plus / Minus

                                                              
Query: 671 ttctanggtctcatattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||| ||| |||||||| || |||||||||||| || |||| | ||||||
Sbjct: 375 ttctagggtttcatattcttcctctgagtcttcctctagagttccatattc 325



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 331 catattcgtcctctcgggtc 312
to top
>gb|AF355997.1| Cortaderia toetoe RNA polymerase beta-subunit (rpoC2) gene, partial
           cds; chloroplast gene for chloroplast product
          Length = 489

 Score =  121 bits (61), Expect = 3e-24
 Identities = 127/149 (85%)
 Strand = Plus / Minus

                                                                       
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcc 470
           |||| |||||||| |||||| ||||||| |||| | ||||||||||||||||| ||||| 
Sbjct: 393 ggctcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggtct 334

                                                                       
Query: 471 tatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||| | |||| ||| |||||||||| || |||||||||||||||| ||||| |||||
Sbjct: 333 tatattggttctcagggctcccatattcttcctctgagtctttctctagagtccgatatt 274

                                        
Query: 531 cgttctctgggttcccatatttgttttct 559
            || |||| || |||| ||||||| ||||
Sbjct: 273 tgtcctctaggatcccgtatttgtcttct 245



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 72/81 (88%), Gaps = 1/81 (1%)
 Strand = Plus / Minus

                                                                       
Query: 638 tcatattcgtcctctcgggtcctgtattccgtgttctanggtctcatattcctcttctga 697
           |||||||| |||||||||||| | ||||| || ||||| | |||||||||| ||||||||
Sbjct: 154 tcatattcttcctctcgggtcttatattc-gtcttctaggctctcatattcttcttctga 96

                                
Query: 698 gtcttccgctcgagtcctata 718
           ||||||| |||||||||||||
Sbjct: 95  gtcttcctctcgagtcctata 75



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 56/61 (91%)
 Strand = Plus / Minus

                                                                       
Query: 319 ggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaa 378
           ||||||||||||||||||| | |||||||||||||||||||  ||||||||||| |||||
Sbjct: 485 ggaatcttcctctgggctcccatattcgtcctctgagtctttctctgagtcttcttctaa 426

            
Query: 379 a 379
           |
Sbjct: 425 a 425



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 54/63 (85%), Gaps = 3/63 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |   ||||||  ||||||||||||||| ||||||
Sbjct: 235 tattcgtcctctaggatcccatattca---tcttctcgggtttcatattcgtcttctcgg 179

              
Query: 656 gtc 658
           |||
Sbjct: 178 gtc 176



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 481 ctctgggttcccatattcctcttctgagtctttctct 517
           ||||||| |||||||||| || |||||||||||||||
Sbjct: 476 ctctgggctcccatattcgtcctctgagtctttctct 440



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| |||||| |||||| ||||| | | | |||||||| |||| || ||  ||
Sbjct: 390 tcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggtcttat 331

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| || ||||||||||||||
Sbjct: 330 attggttctcagggctcccatattc 306



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 428 tctgagtcttcttctaaagttccatattcgtcctct 463
           |||||||||||||||||| || ||||||||| ||||
Sbjct: 442 tctgagtcttcttctaaaattgcatattcgttctct 407



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 626 tcttctanggtttcatattcgtcctct 652
           ||||||| |||||||||||||||||||
Sbjct: 250 tcttctagggtttcatattcgtcctct 224



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 65/79 (82%)
 Strand = Plus / Minus

                                                                       
Query: 450 catattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgagt 509
           ||||||| |||||| ||||| |||||| |   ||| || || ||||||| ||||||||||
Sbjct: 153 catattcttcctctcgggtcttatattcgtcttctaggctctcatattcttcttctgagt 94

                              
Query: 510 ctttctctaaagtcctata 528
           ||| ||||  |||||||||
Sbjct: 93  cttcctctcgagtcctata 75



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                      
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           ||||||| |||||||||||||| |||  ||| | ||| || |||||| |||||||||||
Sbjct: 111 catattcttcttctgagtcttcctctcgagtcctatactcttcctctagggtcctatat 53



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | |||| |||||||||||||||
Sbjct: 219 tcccatattcatcttctcgggtttcatattcgt 187



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 356 tcttcttctgagtcttcctct 376
           |||||||||||||||||||||
Sbjct: 106 tcttcttctgagtcttcctct 86



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 410 gggctgccatattcgtcttctgagtctt 437
           ||||| ||||||||||| ||||||||||
Sbjct: 472 gggctcccatattcgtcctctgagtctt 445



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 354 catattcgtcctctcgggtc 335
to top
>gb|AF355996.1| Cortaderia richardii RNA polymerase beta-subunit (rpoC2) gene,
           partial cds; chloroplast gene for chloroplast product
          Length = 486

 Score =  121 bits (61), Expect = 3e-24
 Identities = 127/149 (85%)
 Strand = Plus / Minus

                                                                       
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcc 470
           |||| |||||||| |||||| ||||||| |||| | ||||||||||||||||| ||||| 
Sbjct: 393 ggctcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggtct 334

                                                                       
Query: 471 tatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||| | |||| ||| |||||||||| || |||||||||||||||| ||||| |||||
Sbjct: 333 tatattggttctcagggctcccatattcttcctctgagtctttctctagagtccgatatt 274

                                        
Query: 531 cgttctctgggttcccatatttgttttct 559
            || |||| || |||| ||||||| ||||
Sbjct: 273 tgtcctctaggatcccgtatttgtcttct 245



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 72/81 (88%), Gaps = 1/81 (1%)
 Strand = Plus / Minus

                                                                       
Query: 638 tcatattcgtcctctcgggtcctgtattccgtgttctanggtctcatattcctcttctga 697
           |||||||| |||||||||||| | ||||| || ||||| | |||||||||| ||||||||
Sbjct: 154 tcatattcttcctctcgggtcttatattc-gtcttctaggctctcatattcttcttctga 96

                                
Query: 698 gtcttccgctcgagtcctata 718
           ||||||| |||||||||||||
Sbjct: 95  gtcttcctctcgagtcctata 75



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 56/61 (91%)
 Strand = Plus / Minus

                                                                       
Query: 319 ggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaa 378
           ||||||||||||||||||| | |||||||||||||||||||  ||||||||||| |||||
Sbjct: 485 ggaatcttcctctgggctcccatattcgtcctctgagtctttctctgagtcttcttctaa 426

            
Query: 379 a 379
           |
Sbjct: 425 a 425



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 54/63 (85%), Gaps = 3/63 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |   ||||||  ||||||||||||||| ||||||
Sbjct: 235 tattcgtcctctaggatcccatattca---tcttctcgggtttcatattcgtcttctcgg 179

              
Query: 656 gtc 658
           |||
Sbjct: 178 gtc 176



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 481 ctctgggttcccatattcctcttctgagtctttctct 517
           ||||||| |||||||||| || |||||||||||||||
Sbjct: 476 ctctgggctcccatattcgtcctctgagtctttctct 440



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| |||||| |||||| ||||| | | | |||||||| |||| || ||  ||
Sbjct: 390 tcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggtcttat 331

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| || ||||||||||||||
Sbjct: 330 attggttctcagggctcccatattc 306



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 428 tctgagtcttcttctaaagttccatattcgtcctct 463
           |||||||||||||||||| || ||||||||| ||||
Sbjct: 442 tctgagtcttcttctaaaattgcatattcgttctct 407



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 626 tcttctanggtttcatattcgtcctct 652
           ||||||| |||||||||||||||||||
Sbjct: 250 tcttctagggtttcatattcgtcctct 224



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 65/79 (82%)
 Strand = Plus / Minus

                                                                       
Query: 450 catattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgagt 509
           ||||||| |||||| ||||| |||||| |   ||| || || ||||||| ||||||||||
Sbjct: 153 catattcttcctctcgggtcttatattcgtcttctaggctctcatattcttcttctgagt 94

                              
Query: 510 ctttctctaaagtcctata 528
           ||| ||||  |||||||||
Sbjct: 93  cttcctctcgagtcctata 75



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                      
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           ||||||| |||||||||||||| |||  ||| | ||| || |||||| |||||||||||
Sbjct: 111 catattcttcttctgagtcttcctctcgagtcctatactcttcctctagggtcctatat 53



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | |||| |||||||||||||||
Sbjct: 219 tcccatattcatcttctcgggtttcatattcgt 187



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 356 tcttcttctgagtcttcctct 376
           |||||||||||||||||||||
Sbjct: 106 tcttcttctgagtcttcctct 86



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 410 gggctgccatattcgtcttctgagtctt 437
           ||||| ||||||||||| ||||||||||
Sbjct: 472 gggctcccatattcgtcctctgagtctt 445



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 354 catattcgtcctctcgggtc 335
to top
>gb|AF355994.1| Cortaderia splendens RNA polymerase beta-subunit (rpoC2) gene,
           partial cds; chloroplast gene for chloroplast product
          Length = 522

 Score =  121 bits (61), Expect = 3e-24
 Identities = 127/149 (85%)
 Strand = Plus / Minus

                                                                       
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcc 470
           |||| |||||||| |||||| ||||||| |||| | ||||||||||||||||| ||||| 
Sbjct: 408 ggctcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggtct 349

                                                                       
Query: 471 tatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||| | |||| ||| |||||||||| || |||||||||||||||| ||||| |||||
Sbjct: 348 tatattggttctcagggctcccatattcttcctctgagtctttctctagagtccgatatt 289

                                        
Query: 531 cgttctctgggttcccatatttgttttct 559
            || |||| || |||| ||||||| ||||
Sbjct: 288 tgtcctctaggatcccgtatttgtcttct 260



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 60/66 (90%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           |||| ||||||||||||||||||| | |||||||||||||||||||  ||||||||||| 
Sbjct: 505 aagagggaatcttcctctgggctcccatattcgtcctctgagtctttctctgagtcttct 446

                 
Query: 374 tctaaa 379
           ||||||
Sbjct: 445 tctaaa 440



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 72/81 (88%), Gaps = 1/81 (1%)
 Strand = Plus / Minus

                                                                       
Query: 638 tcatattcgtcctctcgggtcctgtattccgtgttctanggtctcatattcctcttctga 697
           |||||||| |||||||||||| | ||||| || ||||| | |||||||||| ||||||||
Sbjct: 169 tcatattcttcctctcgggtcttatattc-gtcttctaggctctcatattcttcttctga 111

                                
Query: 698 gtcttccgctcgagtcctata 718
           ||||||| |||||||||||||
Sbjct: 110 gtcttcctctcgagtcctata 90



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 54/63 (85%), Gaps = 3/63 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |   ||||||  ||||||||||||||| ||||||
Sbjct: 250 tattcgtcctctaggatcccatattca---tcttctcgggtttcatattcgtcttctcgg 194

              
Query: 656 gtc 658
           |||
Sbjct: 193 gtc 191



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 481 ctctgggttcccatattcctcttctgagtctttctct 517
           ||||||| |||||||||| || |||||||||||||||
Sbjct: 491 ctctgggctcccatattcgtcctctgagtctttctct 455



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| |||||| |||||| ||||| | | | |||||||| |||| || ||  ||
Sbjct: 405 tcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggtcttat 346

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| || ||||||||||||||
Sbjct: 345 attggttctcagggctcccatattc 321



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 428 tctgagtcttcttctaaagttccatattcgtcctct 463
           |||||||||||||||||| || ||||||||| ||||
Sbjct: 457 tctgagtcttcttctaaaattgcatattcgttctct 422



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 626 tcttctanggtttcatattcgtcctct 652
           ||||||| |||||||||||||||||||
Sbjct: 265 tcttctagggtttcatattcgtcctct 239



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 65/79 (82%)
 Strand = Plus / Minus

                                                                       
Query: 450 catattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgagt 509
           ||||||| |||||| ||||| |||||| |   ||| || || ||||||| ||||||||||
Sbjct: 168 catattcttcctctcgggtcttatattcgtcttctaggctctcatattcttcttctgagt 109

                              
Query: 510 ctttctctaaagtcctata 528
           ||| ||||  |||||||||
Sbjct: 108 cttcctctcgagtcctata 90



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                      
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           ||||||| |||||||||||||| |||  ||| | ||| || |||||| |||||||||||
Sbjct: 126 catattcttcttctgagtcttcctctcgagtcctatactcttcctctagggtcctatat 68



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | |||| |||||||||||||||
Sbjct: 234 tcccatattcatcttctcgggtttcatattcgt 202



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 356 tcttcttctgagtcttcctct 376
           |||||||||||||||||||||
Sbjct: 121 tcttcttctgagtcttcctct 101



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 410 gggctgccatattcgtcttctgagtctt 437
           ||||| ||||||||||| ||||||||||
Sbjct: 487 gggctcccatattcgtcctctgagtctt 460



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 369 catattcgtcctctcgggtc 350
to top
>gb|U96319.1|ESU96319 Enneapogon scaber RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 460

 Score =  121 bits (61), Expect = 3e-24
 Identities = 121/141 (85%)
 Strand = Plus / Minus

                                                                       
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcc 470
           |||| |||||||| |||||||||||||| |||| ||||||||||||||||||| |  |  
Sbjct: 356 ggctcccatattcttcttctgagtcttcctctagagttccatattcgtcctctcgacttt 297

                                                                       
Query: 471 tatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||||| |||||||||||||| |||| ||||| || |||||||||| |||||||||||
Sbjct: 296 tatatttgttctctgggttcccagattcttcttcggaatctttctctagagtcctatatt 237

                                
Query: 531 cgttctctgggttcccatatt 551
            |  |||| || |||||||||
Sbjct: 236 tggcctctaggatcccatatt 216



 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 60/67 (89%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           ||||| ||||| ||||| | |||| |||||||||||||||||||||| ||||||||||| 
Sbjct: 453 aagatagaatcctcctccgagctcccgtattcgtcctctgagtcttcctctgagtcttct 394

                  
Query: 374 tctaaag 380
           |||||||
Sbjct: 393 tctaaag 387



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 78/92 (84%)
 Strand = Plus / Minus

                                                                       
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatttgctctctgggttcccatat 496
           |||||||  ||| |||||||||||||| ||||||||||||   |||||||| || |||||
Sbjct: 171 tcttctagggtttcatattcgtcctctcgggtcctatattcattctctgggctctcatat 112

                                           
Query: 497 tcctcttctgagtctttctctaaagtcctata 528
           || || ||||||||||  |||| |||||||||
Sbjct: 111 tcgtcctctgagtcttcttctagagtcctata 80



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 79/93 (84%), Gaps = 1/93 (1%)
 Strand = Plus / Minus

                                                                       
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
           ||||||| ||||||||||||||||||||||||||| |||| | |  |||  | |||||||
Sbjct: 171 tcttctagggtttcatattcgtcctctcgggtcctatatt-cattctctgggctctcata 113

                                            
Query: 686 ttcctcttctgagtcttccgctcgagtcctata 718
           ||| || |||||||||||  || ||||||||||
Sbjct: 112 ttcgtcctctgagtcttcttctagagtcctata 80



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 36/37 (97%)
 Strand = Plus / Minus

                                                
Query: 328 ctctgggctctcgtattcgtcctctgagtcttcttct 364
           |||||||||||| ||||||||||||||||||||||||
Sbjct: 127 ctctgggctctcatattcgtcctctgagtcttcttct 91



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                       
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||||| |||||||||||||||| ||| | ||| || |||||| | ||||||||||
Sbjct: 116 catattcgtcctctgagtcttcttctagagtcctatactcttcctctagagtcctatatt 57



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 356 tcttcttctgagtcttcctctaaagtaccatatt 389
           |||||||||||||||||||||| ||| |||||||
Sbjct: 345 tcttcttctgagtcttcctctagagttccatatt 312



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 54/63 (85%), Gaps = 1/63 (1%)
 Strand = Plus / Minus

                                                                       
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
           ||||||| |||||||||||| |||||| | ||||| |||| ||| ||||| ||| |||||
Sbjct: 213 tcttctagggtttcatattcatcctctagagtcctatatt-cgtcttctagggtttcata 155

              
Query: 686 ttc 688
           |||
Sbjct: 154 ttc 152



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 568 atattcgttttctagggtttcatattcgt 596
           |||||||| ||||||||||||||||||||
Sbjct: 178 atattcgtcttctagggtttcatattcgt 150



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 564 tcccatattcgttttctagggtttcatattc 594
           |||||||||| | ||||||||||||||||||
Sbjct: 224 tcccatattcatcttctagggtttcatattc 194



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 428 tctgagtcttcttctaaagttccatattcgtcctct 463
           |||||||||||||||||||  || ||||||| ||||
Sbjct: 405 tctgagtcttcttctaaagccccgtattcgttctct 370



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| ||||||||||||||| || |||| | ||||||
Sbjct: 350 catattcttcttctgagtcttcctctagagttccatattc 311
to top
>gb|U96317.1|ECU96317 Eragrostis capensis RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 474

 Score =  121 bits (61), Expect = 3e-24
 Identities = 121/141 (85%)
 Strand = Plus / Minus

                                                                       
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcc 470
           |||| |||||||| |||||||||||||| |||| ||||||||||||||||||| |  |  
Sbjct: 365 ggctcccatattcttcttctgagtcttcctctagagttccatattcgtcctctcgacttt 306

                                                                       
Query: 471 tatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||| | |||||||||||||| |||| |||||||| |||||||||| |||||||||||
Sbjct: 305 tatattcgttctctgggttcccagattcttcttctgaatctttctctagagtcctatatt 246

                                
Query: 531 cgttctctgggttcccatatt 551
            |  |||| || |||||||||
Sbjct: 245 tggcctctaggatcccatatt 225



 Score = 93.7 bits (47), Expect = 8e-16
 Identities = 62/67 (92%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           ||||| |||||||||||||||||| | |||||||||||||||||||| ||||||||||| 
Sbjct: 462 aagatagaatcttcctctgggctcccatattcgtcctctgagtcttcctctgagtcttct 403

                  
Query: 374 tctaaag 380
           |||||||
Sbjct: 402 tctaaag 396



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 81/93 (87%), Gaps = 1/93 (1%)
 Strand = Plus / Minus

                                                                       
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
           ||||||| ||||||||||||||||||||||||||| |||| | |  |||| | |||||||
Sbjct: 180 tcttctagggtttcatattcgtcctctcgggtcctatatt-cattctctaggctctcata 122

                                            
Query: 686 ttcctcttctgagtcttccgctcgagtcctata 718
           ||| || |||||||||||| || ||||||||||
Sbjct: 121 ttcgtcctctgagtcttcctctagagtcctata 89



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 78/92 (84%)
 Strand = Plus / Minus

                                                                       
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatttgctctctgggttcccatat 496
           |||||||  ||| |||||||||||||| ||||||||||||   ||||| || || |||||
Sbjct: 180 tcttctagggtttcatattcgtcctctcgggtcctatattcattctctaggctctcatat 121

                                           
Query: 497 tcctcttctgagtctttctctaaagtcctata 528
           || || |||||||||| ||||| |||||||||
Sbjct: 120 tcgtcctctgagtcttcctctagagtcctata 89



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 356 tcttcttctgagtcttcctctaaagtaccatatt 389
           |||||||||||||||||||||| ||| |||||||
Sbjct: 354 tcttcttctgagtcttcctctagagttccatatt 321



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 568 atattcgttttctagggtttcatattcgt 596
           |||||||| ||||||||||||||||||||
Sbjct: 187 atattcgtcttctagggtttcatattcgt 159



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||| ||||||| ||||||||||||||||||||
Sbjct: 136 ctctaggctctcatattcgtcctctgagtcttc 104



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                       
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||||| ||||||||||| |||| ||| | |||  | |||||| ||||||||||||
Sbjct: 125 catattcgtcctctgagtcttcctctagagtcctatacccttcctctagggtcctatatt 66



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| ||||||||||| |||||||||||
Sbjct: 444 gggctcccatattcgtcctctgagtcttc 416



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||| ||||||||||||
Sbjct: 233 tcccatattcatcttctaggatttcatattcgt 201



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 53/63 (84%), Gaps = 1/63 (1%)
 Strand = Plus / Minus

                                                                       
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
           ||||||| | ||||||||||||||||| | || || |||| ||| ||||| ||| |||||
Sbjct: 222 tcttctaggatttcatattcgtcctctagagtgctatatt-cgtcttctagggtttcata 164

              
Query: 686 ttc 688
           |||
Sbjct: 163 ttc 161



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 428 tctgagtcttcttctaaagttccatattcgtcctct 463
           |||||||||||||||||||  || ||||||| ||||
Sbjct: 414 tctgagtcttcttctaaagccccgtattcgttctct 379



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| ||||||||||||||| || |||| | ||||||
Sbjct: 359 catattcttcttctgagtcttcctctagagttccatattc 320
to top
>gb|U93359.1|CFU93359 Cortaderia fulvida RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 484

 Score =  121 bits (61), Expect = 3e-24
 Identities = 127/149 (85%)
 Strand = Plus / Minus

                                                                       
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcc 470
           |||| |||||||| |||||| ||||||| |||| | ||||||||||||||||| ||||| 
Sbjct: 377 ggctcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggtct 318

                                                                       
Query: 471 tatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||| | |||| ||| |||||||||| || |||||||||||||||| ||||| |||||
Sbjct: 317 tatattggttctcagggctcccatattcttcctctgagtctttctctagagtccgatatt 258

                                        
Query: 531 cgttctctgggttcccatatttgttttct 559
            || |||| || |||| ||||||| ||||
Sbjct: 257 tgtcctctaggatcccgtatttgtcttct 229



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 60/66 (90%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           |||| ||||||||||||||||||| | |||||||||||||||||||  ||||||||||| 
Sbjct: 474 aagagggaatcttcctctgggctcccatattcgtcctctgagtctttctctgagtcttct 415

                 
Query: 374 tctaaa 379
           ||||||
Sbjct: 414 tctaaa 409



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 72/81 (88%), Gaps = 1/81 (1%)
 Strand = Plus / Minus

                                                                       
Query: 638 tcatattcgtcctctcgggtcctgtattccgtgttctanggtctcatattcctcttctga 697
           |||||||| |||||||||||| | ||||| || ||||| | |||||||||| ||||||||
Sbjct: 138 tcatattcttcctctcgggtcttatattc-gtcttctaggctctcatattcttcttctga 80

                                
Query: 698 gtcttccgctcgagtcctata 718
           ||||||| |||||||||||||
Sbjct: 79  gtcttcctctcgagtcctata 59



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 54/63 (85%), Gaps = 3/63 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |   ||||||  ||||||||||||||| ||||||
Sbjct: 219 tattcgtcctctaggatcccatattca---tcttctcgggtttcatattcgtcttctcgg 163

              
Query: 656 gtc 658
           |||
Sbjct: 162 gtc 160



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 481 ctctgggttcccatattcctcttctgagtctttctct 517
           ||||||| |||||||||| || |||||||||||||||
Sbjct: 460 ctctgggctcccatattcgtcctctgagtctttctct 424



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| |||||| |||||| ||||| | | | |||||||| |||| || ||  ||
Sbjct: 374 tcccatattcttcttctaagtcttcctctagaattccatattcgtcctctcgggtcttat 315

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| || ||||||||||||||
Sbjct: 314 attggttctcagggctcccatattc 290



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 428 tctgagtcttcttctaaagttccatattcgtcctct 463
           |||||||||||||||||| || ||||||||| ||||
Sbjct: 426 tctgagtcttcttctaaaattgcatattcgttctct 391



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 626 tcttctanggtttcatattcgtcctct 652
           ||||||| |||||||||||||||||||
Sbjct: 234 tcttctagggtttcatattcgtcctct 208



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 65/79 (82%)
 Strand = Plus / Minus

                                                                       
Query: 450 catattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgagt 509
           ||||||| |||||| ||||| |||||| |   ||| || || ||||||| ||||||||||
Sbjct: 137 catattcttcctctcgggtcttatattcgtcttctaggctctcatattcttcttctgagt 78

                              
Query: 510 ctttctctaaagtcctata 528
           ||| ||||  |||||||||
Sbjct: 77  cttcctctcgagtcctata 59



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                      
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           ||||||| |||||||||||||| |||  ||| | ||| || |||||| |||||||||||
Sbjct: 95  catattcttcttctgagtcttcctctcgagtcctatactcttcctctagggtcctatat 37



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | |||| |||||||||||||||
Sbjct: 203 tcccatattcatcttctcgggtttcatattcgt 171



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 356 tcttcttctgagtcttcctct 376
           |||||||||||||||||||||
Sbjct: 90  tcttcttctgagtcttcctct 70



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 410 gggctgccatattcgtcttctgagtctt 437
           ||||| ||||||||||| ||||||||||
Sbjct: 456 gggctcccatattcgtcctctgagtctt 429



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 639 catattcgtcctctcgggtc 658
           ||||||||||||||||||||
Sbjct: 338 catattcgtcctctcgggtc 319
to top
>gb|AY174489.1| Panicum rudgei DNA-directed RNA polymerase beta' subunit 2 (rpoC2)
           gene, partial cds; chloroplast gene for chloroplast
           product
          Length = 541

 Score =  119 bits (60), Expect = 1e-23
 Identities = 98/113 (86%)
 Strand = Plus / Minus

                                                                       
Query: 277 ttttgttcctcgatgctcaatcaaaccctcnnnnnnnaagatggaatcttcctctgggct 336
           ||||||||||||||||||||| ||||||||       ||||||||||||||||| |||||
Sbjct: 541 ttttgttcctcgatgctcaataaaaccctctttttttaagatggaatcttcctccgggct 482

                                                                
Query: 337 ctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           | | |||||||| ||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 481 cccatattcgtcttctgagtcttcctctgagtcttcttctaaagtcccatatt 429



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 80/93 (86%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| ||||| |||||| | |||||||| | || ||||| || ||||||||||||||||
Sbjct: 332 cctctcgggtcttatattcgttctctgggctaccgtattcttcctctgagtctttctcta 273

                                            
Query: 519 aagtcctatattcgttctctgggttcccatatt 551
            |||||||||||||| |||| || |||||||||
Sbjct: 272 gagtcctatattcgtcctctaggatcccatatt 240



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 61/71 (85%), Gaps = 3/71 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |   ||||||| ||||||||||||||||||| | 
Sbjct: 264 tattcgtcctctaggatcccatattca---tcttctagggtttcatattcgtcctctaga 208

                      
Query: 656 gtcctgtattc 666
           ||||| |||||
Sbjct: 207 gtcctatattc 197



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           |||||||||| || |||||||||||| |||||||||||||
Sbjct: 137 tctcatattcgtcctctgagtcttcctctcgagtcctata 98



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||||||| ||||||||||||| ||||| || ||||||||
Sbjct: 404 tcccatattcttcttctgagtcttcctctagagccctatatt 363



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| |||||||||||||||||||||||
Sbjct: 486 gggctcccatattcgtcttctgagtcttc 458



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 456 tctgagtcttcttctaaagtcccatattc 428



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 248 tcccatattcatcttctagggtttcatattcgt 216



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           ||||| |||||| ||||||||||||||||||||
Sbjct: 145 ctctgtgctctcatattcgtcctctgagtcttc 113



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 682 catattcctcttctgagtcttccgctcgagtcctatatt 720
           ||||||| ||||||||||||||| || ||| ||||||||
Sbjct: 401 catattcttcttctgagtcttcctctagagccctatatt 363



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 356 tcttcttctgagtcttcctcta 377
           ||||||||||||||||||||||
Sbjct: 396 tcttcttctgagtcttcctcta 375



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 596 tattcgtcttctaggattccatattt 621
           |||||||||||||||||| |||||||
Sbjct: 201 tattcgtcttctaggatttcatattt 176



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 489 tcccatattcctcttctgagtctttctct 517
           |||||||||| ||||||||||||| ||||
Sbjct: 482 tcccatattcgtcttctgagtcttcctct 454



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 416 ccatattcgtcttctgagtcttcttcta 443
           |||||||| |||||||||||||| ||||
Sbjct: 402 ccatattcttcttctgagtcttcctcta 375



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||  ||||||| |||||||||||||
Sbjct: 310 ctctgggctaccgtattcttcctctgagtctt 279



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 237 tcttctagggtttcatattcgtcctctagagtcctatatt 198



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                       
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||||| ||||||||||| |||  ||| | ||| || |||||| |||||| |||||
Sbjct: 134 catattcgtcctctgagtcttcctctcgagtcctatactcttcctctcgggtccgatatt 75
to top
>gb|AF372180.1| Mesosetum chaseae DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 532

 Score =  119 bits (60), Expect = 1e-23
 Identities = 117/136 (86%)
 Strand = Plus / Minus

                                                                       
Query: 416 ccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           |||||||| |||||||| ||||| |||| |||||| |||||||||||| ||||| |||||
Sbjct: 392 ccatattcttcttctgattcttcctctagagttccgtattcgtcctctcgggtcttatat 333

                                                                       
Query: 476 ttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttc 535
           | | ||||| || |||||||||| || |||| ||||||||||| || ||||||||||| |
Sbjct: 332 tcgttctctaggctcccatattcttcctctgtgtctttctctagagacctatattcgtcc 273

                           
Query: 536 tctgggttcccatatt 551
           ||| || |||||||||
Sbjct: 272 tctaggatcccatatt 257



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 96/114 (84%)
 Strand = Plus / Minus

                                                                       
Query: 276 cttttgttcctcgatgctcaatcaaaccctcnnnnnnnaagatggaatcttcctctgggc 335
           |||||||||||||||||||||| ||||| ||   |   ||||| ||||||||||| | ||
Sbjct: 532 cttttgttcctcgatgctcaataaaaccttctttnattaagatagaatcttcctccgagc 473

                                                                 
Query: 336 tctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           || | ||||| || ||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 472 tcccatattcatcttctgagtcttcctctgagtcttcttctaaagtcccatatt 419



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 60/70 (85%), Gaps = 3/70 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |   ||||||| ||||||||||||||||||| | 
Sbjct: 281 tattcgtcctctaggatcccatattca---tcttctagggtttcatattcgtcctctaga 225

                     
Query: 656 gtcctgtatt 665
           ||||| ||||
Sbjct: 224 gtcctatatt 215



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| ||||||||||||||||||||
Sbjct: 162 ctctgggctctcatattcgtcctctgagtcttc 130



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 446 tctgagtcttcttctaaagtcccatattc 418



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                       
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccat 548
           |||||||||| |||||||| |||| ||||| ||| |  ||||||| |||| || ||  ||
Sbjct: 394 tcccatattcttcttctgattcttcctctagagttccgtattcgtcctctcgggtcttat 335

                                    
Query: 549 atttgttttctgggctcccatattc 573
           ||| ||| ||| |||||||||||||
Sbjct: 334 attcgttctctaggctcccatattc 310



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 265 tcccatattcatcttctagggtttcatattcgt 233



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 489 tcccatattcctcttctgagtctttctct 517
           |||||||||| ||||||||||||| ||||
Sbjct: 472 tcccatattcatcttctgagtcttcctct 444



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 254 tcttctagggtttcatattcgtcctctagagtcctatatt 215



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           |||||||||| || ||||||||||||  | ||||||||||
Sbjct: 154 tctcatattcgtcctctgagtcttcctgttgagtcctata 115
to top
>gb|AF064761.1|AF064761 Ehrharta dura DNA-directed RNA polymerase beta' subunit 2 (rpoC2)
           gene, chloroplast gene encoding chloroplast protein,
           partial cds
          Length = 522

 Score =  119 bits (60), Expect = 1e-23
 Identities = 114/132 (86%)
 Strand = Plus / Minus

                                                                       
Query: 420 attcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatttgc 479
           |||| |||||||||||||| |||| ||||||||||||||||||| |||| ||||||| | 
Sbjct: 420 attcttcttctgagtcttcctctagagttccatattcgtcctctcgggttctatattcgt 361

                                                                       
Query: 480 tctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttctctg 539
           |||||||  | ||||||||  | |||||||||| ||||   |||||||||||||||||||
Sbjct: 360 tctctggacttccatattcggcctctgagtcttcctctcgggtcctatattcgttctctg 301

                       
Query: 540 ggttcccatatt 551
           || |||||||||
Sbjct: 300 ggatcccatatt 289



 Score =  111 bits (56), Expect = 3e-21
 Identities = 71/76 (93%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           ||||||||||| |||| ||||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 505 aagatggaatcctcctgtgggctcccgtattcgtcctctgagtcttcctctgagtcttcc 446

                           
Query: 374 tctaaagtaccatatt 389
           |||||||| |||||||
Sbjct: 445 tctaaagtcccatatt 430



 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 96/115 (83%)
 Strand = Plus / Minus

                                                                       
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatttgctctctgggttcccatat 496
           ||||||| |||| ||||||| |||||| ||||||||||||   | |||||| ||||||||
Sbjct: 202 tcttctagagtttcatattcttcctctcgggtcctatattcattttctgggctcccatat 143

                                                                  
Query: 497 tcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccatatt 551
           || || |||||||||| ||||   ||||||||||||| |||| || ||| |||||
Sbjct: 142 tcgtcctctgagtcttcctctcgggtcctatattcgtcctctcgggtcctatatt 88



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 92/111 (82%), Gaps = 9/111 (8%)
 Strand = Plus / Minus

                                                                       
Query: 547 atatttgttttctgggctcccatattcgttttctagggtttcatattcgtattcgtcttc 606
           ||||| ||| |||||| |||||||||||| |||||| ||||||      |||||||| ||
Sbjct: 314 atattcgttctctgggatcccatattcgtcttctagagtttca------tattcgtcctc 261

                                                              
Query: 607 taggattccatatttagattcttctanggtttcatattcgtcctctcgggt 657
           |||||| ||||||| |   ||||||| ||||||||||||||||||| ||||
Sbjct: 260 taggatcccatattca---tcttctagggtttcatattcgtcctctagggt 213



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 128/158 (81%), Gaps = 10/158 (6%)
 Strand = Plus / Minus

                                                                       
Query: 564 tcccatattcgttttctagggtttcatattcgtattcgtcttctaggattccatatttag 623
           |||||||||| | ||||||||||||||||||||      | |||||| ||| ||||||  
Sbjct: 255 tcccatattcatcttctagggtttcatattcgt------cctctagggttcgatatttg- 203

                                                                       
Query: 624 attcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctca 683
             |||||||  ||||||||||| |||||||||||||| |||||  | ||||  | || ||
Sbjct: 202 --tcttctagagtttcatattcttcctctcgggtcctatattcatt-ttctgggctccca 146

                                                 
Query: 684 tattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||| || |||||||||||| |||| |||||||||||
Sbjct: 145 tattcgtcctctgagtcttcctctcgggtcctatattc 108



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                            
Query: 341 tattcgtcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           ||||||||||| || |||||||||||||||||||||| ||| |||||||
Sbjct: 433 tattcgtcctccgattcttcttctgagtcttcctctagagttccatatt 385



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 58/67 (86%)
 Strand = Plus / Minus

                                                                       
Query: 410 gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtc 469
           ||||| ||||||||||| ||||||||||| |||   || | ||||||||||||| |||||
Sbjct: 154 gggctcccatattcgtcctctgagtcttcctctcgggtcctatattcgtcctctcgggtc 95

                  
Query: 470 ctatatt 476
           |||||||
Sbjct: 94  ctatatt 88



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 458 tcctcttgggtcctatatttgctctctgggttcccatattcctcttct 505
           |||||| |||||||||||| | |||||||| |||||||||| ||||||
Sbjct: 328 tcctctcgggtcctatattcgttctctgggatcccatattcgtcttct 281



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 428 tctgagtcttcttctaaagttccatattcgtcctc 462
           ||||||||||| |||||||| ||||||||||||||
Sbjct: 457 tctgagtcttcctctaaagtcccatattcgtcctc 423



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 66/80 (82%)
 Strand = Plus / Minus

                                                                       
Query: 495 attcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccatatttgt 554
           |||| ||||||||||||| ||||| ||| | |||||||| |||| || | | ||||| ||
Sbjct: 420 attcttcttctgagtcttcctctagagttccatattcgtcctctcgggttctatattcgt 361

                               
Query: 555 tttctgggctcccatattcg 574
           | ||||| || |||||||||
Sbjct: 360 tctctggacttccatattcg 341



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 329 tctgggctctcgtattcgtcctctgagtcttc 360
           ||||||||| | ||||||||||||||||||||
Sbjct: 157 tctgggctcccatattcgtcctctgagtcttc 126



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 503 tctgagtctttctctaaagtcctatattcgt 533
           |||||||||| ||||||||||| ||||||||
Sbjct: 457 tctgagtcttcctctaaagtcccatattcgt 427



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 640 atattcgtcctctcgggtcctgtattc 666
           ||||||||||||||||||||| |||||
Sbjct: 113 atattcgtcctctcgggtcctatattc 87



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 554 ttttctgggctcccatattcgt 575
           ||||||||||||||||||||||
Sbjct: 160 ttttctgggctcccatattcgt 139



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 70/85 (82%), Gaps = 5/85 (5%)
 Strand = Plus / Minus

                                                                       
Query: 639 catattcgtcctctcgggtcctgtattccgtgttctanggtct--catattcctcttctg 696
           ||||||||||||||||||| || |||||   |||||  || ||  |||||||  | ||||
Sbjct: 390 catattcgtcctctcgggttctatattc---gttctctggacttccatattcggcctctg 334

                                    
Query: 697 agtcttccgctcgagtcctatattc 721
           |||||||| |||| |||||||||||
Sbjct: 333 agtcttcctctcgggtcctatattc 309



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 451 atattcgtcctcttgggtcctatat 475
           ||||||||||||| |||||||||||
Sbjct: 92  atattcgtcctctagggtcctatat 68



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatt 476
           ||||||| |||| |||||||||||||| || ||| |||||
Sbjct: 286 tcttctagagtttcatattcgtcctctaggatcccatatt 247
to top
>gb|U90825.1|OLU90825 Olyra latifolia RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 407

 Score =  117 bits (59), Expect = 5e-23
 Identities = 110/127 (86%)
 Strand = Plus / Minus

                                                                       
Query: 425 tcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatttgctctct 484
           |||||||||||||| |||| |||||| |||||||||||| |||||||||||| | | |||
Sbjct: 362 tcttctgagtcttcctctagagttccgtattcgtcctctcgggtcctatattcgttttct 303

                                                                       
Query: 485 gggttcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttc 544
           ||| ||| |||||| || |||||||||| ||||  |||||||||||||| |||| || ||
Sbjct: 302 gggctcctatattcgtcctctgagtcttcctctcgagtcctatattcgtcctctaggatc 243

                  
Query: 545 ccatatt 551
           |||||||
Sbjct: 242 ccatatt 236



 Score =  111 bits (56), Expect = 3e-21
 Identities = 62/64 (96%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 407 aagatggaatcttcttctgggctcccgtattcgtcctctgagtcttcttctgagtcttcc 348

               
Query: 374 tcta 377
           ||||
Sbjct: 347 tcta 344



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 70/81 (86%), Gaps = 1/81 (1%)
 Strand = Plus / Minus

                                                                       
Query: 641 tattcgtcctctcgggtcctgtattccgtgttctanggtctcatattcctcttctgagtc 700
           |||||||||||||||||||| ||||| || ||||  | ||  |||||| || ||||||||
Sbjct: 335 tattcgtcctctcgggtcctatattc-gttttctgggctcctatattcgtcctctgagtc 277

                                
Query: 701 ttccgctcgagtcctatattc 721
           |||| ||||||||||||||||
Sbjct: 276 ttcctctcgagtcctatattc 256



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 65/76 (85%)
 Strand = Plus / Minus

                                                                       
Query: 500 tcttctgagtctttctctaaagtcctatattcgttctctgggttcccatatttgttttct 559
           ||||||||||||| ||||| ||| |  ||||||| |||| || ||| ||||| |||||||
Sbjct: 362 tcttctgagtcttcctctagagttccgtattcgtcctctcgggtcctatattcgttttct 303

                           
Query: 560 gggctcccatattcgt 575
           ||||||| ||||||||
Sbjct: 302 gggctcctatattcgt 287



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                       
Query: 451 atattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtc 510
           |||||| | |||| ||||||||||   | |||||||| |||||||||| || ||||||||
Sbjct: 132 atattctttctctcgggtcctatacccgttctctgggctcccatattcgtcctctgagtc 73

                                  
Query: 511 tttctctaaagtcctatattcgt 533
           || ||||  ||||||||||||||
Sbjct: 72  ttcctctcgagtcctatattcgt 50



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                       
Query: 410 gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtc 469
           ||||| ||||||||||| ||||||||||| |||  ||| | ||||||||| ||| |||||
Sbjct: 98  gggctcccatattcgtcctctgagtcttcctctcgagtcctatattcgtcttctagggtc 39

                 
Query: 470 ctatat 475
           ||||||
Sbjct: 38  ctatat 33



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||||| ||||||||||||||||||||
Sbjct: 202 tcccatattcgtcttctagggtttcatattcgt 170



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                           
Query: 564 tcccatattcgttttctagggtttcatattcg 595
           |||||||||||| |||||||||||||||||||
Sbjct: 244 tcccatattcgtcttctagggtttcatattcg 213



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| || |||||||||||| ||||||||||||||||
Sbjct: 91  catattcgtcctctgagtcttcctctcgagtcctatattc 52



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||| | ||||||||||||||||||||
Sbjct: 102 ctctgggctcccatattcgtcctctgagtcttc 70



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                      
Query: 418 atattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatt 476
           ||||||||| ||||||||||| |||  ||| | ||||||||||||| || ||| |||||
Sbjct: 294 atattcgtcctctgagtcttcctctcgagtcctatattcgtcctctaggatcccatatt 236



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 410 gggctgccatattcgtcttctgagtcttcttct 442
           ||||| || |||||||| |||||||||||||||
Sbjct: 389 gggctcccgtattcgtcctctgagtcttcttct 357



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 53/63 (84%), Gaps = 1/63 (1%)
 Strand = Plus / Minus

                                                                       
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
           ||||||| ||||||||||||| ||||| || |||  |||| ||| ||||| ||| |||||
Sbjct: 233 tcttctagggtttcatattcgccctctaggatcccatatt-cgtcttctagggtttcata 175

              
Query: 686 ttc 688
           |||
Sbjct: 174 ttc 172



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 341 tattcgtcctctgagtcttc 360
           ||||||||||||||||||||
Sbjct: 293 tattcgtcctctgagtcttc 274
to top
>gb|AF372169.1| Panicum koolauense DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 500

 Score =  115 bits (58), Expect = 2e-22
 Identities = 96/111 (86%)
 Strand = Plus / Minus

                                                                       
Query: 279 ttgttcctcgatgctcaatcaaaccctcnnnnnnnaagatggaatcttcctctgggctct 338
           ||||||||||||||||||| ||||||||       ||||||||||||||||| |||||| 
Sbjct: 499 ttgttcctcgatgctcaataaaaccctctttttttaagatggaatcttcctccgggctcc 440

                                                              
Query: 339 cgtattcgtcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           | |||||||| ||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 439 catattcgtcttctgagtcttcctctgagtcttcttctaaagtcccatatt 389



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 80/93 (86%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| ||||| |||||| | ||||| || ||| |||||| |||||||||||||||||||
Sbjct: 292 cctctcgggtcttatattcgttctctagggtcctatattcttcttctgagtctttctcta 233

                                            
Query: 519 aagtcctatattcgttctctgggttcccatatt 551
            || ||||||||||| |||| || |||||||||
Sbjct: 232 gagccctatattcgtcctctaggatcccatatt 200



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||| | |||||||| || ||||||| || |||||||||| |||| 
Sbjct: 127 cctctcgggtcctatattcgttctctgggctctcatattcatcctctgagtcttcctctc 68

                     
Query: 519 aagtcctata 528
            |||||||||
Sbjct: 67  gagtcctata 58



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 490 cccatattcctcttctgagtctttctctaaagtcctatattcgt 533
           ||||||||| ||||||||||||| ||||| |||| |||||||||
Sbjct: 363 cccatattcttcttctgagtcttcctctagagtcttatattcgt 320



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 61/71 (85%), Gaps = 1/71 (1%)
 Strand = Plus / Minus

                                                                       
Query: 648 cctctcgggtcctgtattccgtgttctanggtctcatattcctcttctgagtcttccgct 707
           ||||||||||||| |||| |||  |||  | |||||||||| || |||||||||||| ||
Sbjct: 127 cctctcgggtcctatatt-cgttctctgggctctcatattcatcctctgagtcttcctct 69

                      
Query: 708 cgagtcctata 718
           |||||||||||
Sbjct: 68  cgagtcctata 58



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| |||||||||||||||||||||||
Sbjct: 446 gggctcccatattcgtcttctgagtcttc 418



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 416 tctgagtcttcttctaaagtcccatattc 388



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| ||||| ||||||||||||||
Sbjct: 105 ctctgggctctcatattcatcctctgagtcttc 73



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| ||||||||||||||| || ||||| |||||||
Sbjct: 361 catattcttcttctgagtcttcctctagagtcttatattc 322



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 564 tcccatattcgttttctagggtttcatattcg 595
           |||||||||| | |||||||||||||||||||
Sbjct: 208 tcccatattcatcttctagggtttcatattcg 177



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 521 gtcctatattcgttctctgggttcccatatt 551
           ||||||||||||||||||||| || ||||||
Sbjct: 119 gtcctatattcgttctctgggctctcatatt 89



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 356 tcttcttctgagtcttcctcta 377
           ||||||||||||||||||||||
Sbjct: 356 tcttcttctgagtcttcctcta 335



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 44/51 (86%), Gaps = 3/51 (5%)
 Strand = Plus / Minus

                                                              
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcg 646
           |||||||| |||||||| ||||||| |   ||||||| |||||||||||||
Sbjct: 224 tattcgtcctctaggatcccatattca---tcttctagggtttcatattcg 177



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 489 tcccatattcctcttctgagtctttctct 517
           |||||||||| ||||||||||||| ||||
Sbjct: 442 tcccatattcgtcttctgagtcttcctct 414



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 596 tattcgtcttctaggattccatatt 620
           |||||||||||||||||| ||||||
Sbjct: 326 tattcgtcttctaggatttcatatt 302



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 596 tattcgtcttctaggattccatatt 620
           |||||||||||||||||| ||||||
Sbjct: 161 tattcgtcttctaggatttcatatt 137



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 416 ccatattcgtcttctgagtcttcttcta 443
           |||||||| |||||||||||||| ||||
Sbjct: 362 ccatattcttcttctgagtcttcctcta 335



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 568 atattcgttttctagggtttcatattcg 595
           |||||||| ||||||| |||||||||||
Sbjct: 327 atattcgtcttctaggatttcatattcg 300
to top
>gb|AY174496.1| Setaria parviflora DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 517

 Score =  113 bits (57), Expect = 8e-22
 Identities = 95/110 (86%)
 Strand = Plus / Minus

                                                                       
Query: 280 tgttcctcgatgctcaatcaaaccctcnnnnnnnaagatggaatcttcctctgggctctc 339
           |||||||||||||||||| |||| |||       |||||||||||||||||||||||| |
Sbjct: 517 tgttcctcgatgctcaataaaactctctttttttaagatggaatcttcctctgggctccc 458

                                                             
Query: 340 gtattcgtcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
            |||||||| ||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 457 atattcgtcttctgagtcttcctctgagtcttcttctaaagtcccatatt 408



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 78/93 (83%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| ||||| |||||| | |||||||| |||| ||||| || ||||||||||||||||
Sbjct: 311 cctctcgggtcttatattcgttctctgggctcccgtattcttcctctgagtctttctcta 252

                                            
Query: 519 aagtcctatattcgttctctgggttcccatatt 551
            || || |||||||| |||| || | |||||||
Sbjct: 251 gaggcccatattcgtcctctaggattccatatt 219



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 61/70 (87%), Gaps = 3/70 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||||||||||| |   ||||||| ||||||||||||||||||| | 
Sbjct: 243 tattcgtcctctaggattccatattca---tcttctagggtttcatattcgtcctctaga 187

                     
Query: 656 gtcctgtatt 665
           ||||| ||||
Sbjct: 186 gtcctatatt 177



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                     
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||||||| ||||||||||||| ||||| |||||||||||
Sbjct: 383 tcccatattcttcttctgagtcttcctctagagtcctatatt 342



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||| | | |||||| || ||||||| || |||||||||| |||||
Sbjct: 146 cctctcgggtcctatattcgttttctgggctctcatattcgtcctctgagtcttcctcta 87

                     
Query: 519 aagtcctata 528
            |||||||||
Sbjct: 86  gagtcctata 77



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                           
Query: 329 tctgggctctcgtattcgtcctctgagtcttc 360
           ||||||||||| ||||||||||||||||||||
Sbjct: 123 tctgggctctcatattcgtcctctgagtcttc 92



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 61/71 (85%), Gaps = 1/71 (1%)
 Strand = Plus / Minus

                                                                       
Query: 648 cctctcgggtcctgtattccgtgttctanggtctcatattcctcttctgagtcttccgct 707
           ||||||||||||| ||||| || ||||  | |||||||||| || |||||||||||| ||
Sbjct: 146 cctctcgggtcctatattc-gttttctgggctctcatattcgtcctctgagtcttcctct 88

                      
Query: 708 cgagtcctata 718
            ||||||||||
Sbjct: 87  agagtcctata 77



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 682 catattcctcttctgagtcttccgctcgagtcctatatt 720
           ||||||| ||||||||||||||| || ||||||||||||
Sbjct: 380 catattcttcttctgagtcttcctctagagtcctatatt 342



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| |||||||||||||||||||||||
Sbjct: 465 gggctcccatattcgtcttctgagtcttc 437



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 481 ctctgggttcccatattcctcttctgagtctttctct 517
           ||||||| |||||||||| ||||||||||||| ||||
Sbjct: 469 ctctgggctcccatattcgtcttctgagtcttcctct 433



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 435 tctgagtcttcttctaaagtcccatattc 407



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| ||||||| |||||||||||||
Sbjct: 289 ctctgggctcccgtattcttcctctgagtctt 258



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                       
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||||| ||||||||||| |||| ||| | ||| || |||||| |||||| |||||
Sbjct: 113 catattcgtcctctgagtcttcctctagagtcctatactcttcctctcgggtccgatatt 54



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 356 tcttcttctgagtcttcctctaaagtaccatattt 390
           |||||||||||||||||||||| ||| | ||||||
Sbjct: 375 tcttcttctgagtcttcctctagagtcctatattt 341



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 566 ccatattcgttttctagggtttcatattcgt 596
           |||||||| | ||||||||||||||||||||
Sbjct: 225 ccatattcatcttctagggtttcatattcgt 195



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatttg 478
           |||||||  ||| |||||||||||||| | ||||||||||||
Sbjct: 216 tcttctagggtttcatattcgtcctctagagtcctatatttg 175



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 547 atatttgttttctgggctcccatattcgt 575
           ||||| ||||||||||||| |||||||||
Sbjct: 133 atattcgttttctgggctctcatattcgt 105



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 557 tctgggctcccatattcgttttct 580
           ||||||||||||||||||| ||||
Sbjct: 468 tctgggctcccatattcgtcttct 445



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 416 ccatattcgtcttctgagtcttcttcta 443
           |||||||| |||||||||||||| ||||
Sbjct: 381 ccatattcttcttctgagtcttcctcta 354
to top
>gb|AF000022.1|TBAF000022 Tristachya biseriata RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 476

 Score =  113 bits (57), Expect = 8e-22
 Identities = 84/93 (90%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||||| ||||| || |||||||||| || ||||||||||||||||
Sbjct: 318 cctctcgggtcctatatttgttctctaggctcccatattcttcctctgagtctttctcta 259

                                            
Query: 519 aagtcctatattcgttctctgggttcccatatt 551
            ||||||||||||||||||| || |||||||||
Sbjct: 258 gagtcctatattcgttctctaggatcccatatt 226



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 62/70 (88%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||||| |||||||| || ||||||| ||||||||||||| |||| 
Sbjct: 195 cctctcgggtcctatatttgttctctgggctctcatattcgtcttctgagtcttcctctc 136

                     
Query: 519 aagtcctata 528
            |||||||||
Sbjct: 135 gagtcctata 126



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 52/57 (91%)
 Strand = Plus / Minus

                                                                    
Query: 320 gaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctct 376
           ||||||||||| |||||| | |||||||| ||||||||||| |||||||||||||||
Sbjct: 475 gaatcttcctccgggctcccatattcgtcttctgagtcttcctctgagtcttcctct 419



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           |||||||||| ||||||||||||||| |||||||||||||
Sbjct: 165 tctcatattcgtcttctgagtcttcctctcgagtcctata 126



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                      
Query: 347 tcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           |||||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 436 tcctctgagtcttcctctgagtcttcttctaaagtcccatatt 394



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| |||||||||||||||||||||||
Sbjct: 463 gggctcccatattcgtcttctgagtcttc 435



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 421 tctgagtcttcttctaaagtcccatattc 393



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| |||||||| |||||||||||
Sbjct: 173 ctctgggctctcatattcgtcttctgagtcttc 141



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                       
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||||||||||||||||| |||  ||| | ||| || |||||| |||||| |||||
Sbjct: 162 catattcgtcttctgagtcttcctctcgagtcctatactcttcctctcgggtccgatatt 103



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 489 tcccatattcctcttctgagtctttctcta 518
           |||||||||| ||||||||||||| |||||
Sbjct: 369 tcccatattcttcttctgagtcttcctcta 340



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 356 tcttcttctgagtcttcctcta 377
           ||||||||||||||||||||||
Sbjct: 361 tcttcttctgagtcttcctcta 340



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 489 tcccatattcctcttctgagtctttctct 517
           |||||||||| ||||||||||||| ||||
Sbjct: 459 tcccatattcgtcttctgagtcttcctct 431



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                            
Query: 547 atatttgttttctgggctcccatattcgttttctagggtttcatattcg 595
           ||||| ||| ||| || |||||||||| | ||||||| |||||||||||
Sbjct: 251 atattcgttctctaggatcccatattcatcttctaggatttcatattcg 203



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| || |||||||||| | || |||||||||||||
Sbjct: 285 catattcttcctctgagtctttctctagagtcctatattc 246
to top
>gb|U92483.2|U92483 Chaetobromus dregeanus RNA polymerase beta-subunit (rpoC2) gene,
           choroplast gene encoding chloroplast protein, partial
           cds
          Length = 476

 Score =  109 bits (55), Expect = 1e-20
 Identities = 70/75 (93%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           |||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||| 
Sbjct: 469 aagagggaatcttcctctgggctcccgtattcgtcctctgagtcttcctctgagtcttct 410

                          
Query: 374 tctaaagtaccatat 388
           |||||||| ||||||
Sbjct: 409 tctaaagtcccatat 395



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 88/102 (86%)
 Strand = Plus / Minus

                                                                       
Query: 450 catattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgagt 509
           |||||||||| ||| ||||| |||||| | | |||||| |||||||||| || |||||||
Sbjct: 345 catattcgtcttctcgggtcttatattcgttttctgggctcccatattcttcctctgagt 286

                                                     
Query: 510 ctttctctaaagtcctatattcgttctctgggttcccatatt 551
           ||||||||| |||||||||||||| |||| || |||| ||||
Sbjct: 285 ctttctctagagtcctatattcgtcctctaggatcccgtatt 244



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 80/96 (83%), Gaps = 1/96 (1%)
 Strand = Plus / Minus

                                                                       
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
           ||||||  ||||||||||||||| ||||||||| | |||| ||| ||||  | || ||||
Sbjct: 358 tcttctcgggtttcatattcgtcttctcgggtcttatatt-cgttttctgggctcccata 300

                                               
Query: 686 ttcctcttctgagtcttccgctcgagtcctatattc 721
           ||| || |||||||||| | || |||||||||||||
Sbjct: 299 ttcttcctctgagtctttctctagagtcctatattc 264



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           |||| ||||| ||||||||||||||| |||||||||||||
Sbjct: 114 tctcgtattcttcttctgagtcttcctctcgagtcctata 75



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 54/63 (85%), Gaps = 1/63 (1%)
 Strand = Plus / Minus

                                                                       
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
           ||||||  ||||||||||||||| ||||||||| | |||| ||| ||||| | |||||||
Sbjct: 199 tcttctcgggtttcatattcgtcttctcgggtcttatatt-cgttttctaggttctcata 141

              
Query: 686 ttc 688
           |||
Sbjct: 140 ttc 138



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 561 ggctcccatattcgttttctagggtttcatattcgt 596
           ||||||||||||| | |||| |||||||||||||||
Sbjct: 372 ggctcccatattcatcttctcgggtttcatattcgt 337



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 428 tctgagtcttcttctaaagttccatat 454
           |||||||||||||||||||| ||||||
Sbjct: 421 tctgagtcttcttctaaagtcccatat 395



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 547 atatttgttttctgggctcccatattc 573
           ||||| |||||||||||||||||||||
Sbjct: 323 atattcgttttctgggctcccatattc 297



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 564 tcccatattcgttttctagggtttcatattc 594
           |||| ||||||| ||||||||||||||||||
Sbjct: 252 tcccgtattcgtcttctagggtttcatattc 222



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 626 tcttctanggtttcatattcgtcctctcgggtcc 659
           ||||||| |||||||||||| |||||| ||||||
Sbjct: 241 tcttctagggtttcatattcttcctctagggtcc 208



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                 
Query: 410 gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctct 463
           ||||| |||||||| || ||||||||||  |||| ||| | |||||||||||||
Sbjct: 310 gggctcccatattcttcctctgagtctttctctagagtcctatattcgtcctct 257



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | |||| |||||||||||||||
Sbjct: 210 tcccatattcatcttctcgggtttcatattcgt 178



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 356 tcttcttctgagtcttcctct 376
           |||||||||||||||||||||
Sbjct: 106 tcttcttctgagtcttcctct 86



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                    
Query: 419 tattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           ||||| |||||||||||||| |||  ||| | ||| || |||||| |||||||||||
Sbjct: 109 tattcttcttctgagtcttcctctcgagtcctatactcttcctctagggtcctatat 53
to top
>gb|AY174497.1| Setaria sphacelata DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 403

 Score =  107 bits (54), Expect = 5e-20
 Identities = 95/111 (85%)
 Strand = Plus / Minus

                                                                       
Query: 279 ttgttcctcgatgctcaatcaaaccctcnnnnnnnaagatggaatcttcctctgggctct 338
           ||||||||||||||||||| |||| |||       ||||||||||||||||||| |||| 
Sbjct: 403 ttgttcctcgatgctcaataaaactctctttttttaagatggaatcttcctctgagctcc 344

                                                              
Query: 339 cgtattcgtcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           | |||||||| ||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 343 catattcgtcttctgagtcttcctctgagtcttcttctaaagtcccatatt 293



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 61/70 (87%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| ||||| |||||| | |||||||| |||| ||||| || ||||||||||||||||
Sbjct: 196 cctctcgggtcttatattcgttctctgggctcccgtattcttcctctgagtctttctcta 137

                     
Query: 519 aagtcctata 528
            |||||||||
Sbjct: 136 gagtcctata 127



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                     
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||||||| ||||||||||||| ||||| |||||||||||
Sbjct: 268 tcccatattcttcttctgagtcttcctctagagtcctatatt 227



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 682 catattcctcttctgagtcttccgctcgagtcctatatt 720
           ||||||| ||||||||||||||| || ||||||||||||
Sbjct: 265 catattcttcttctgagtcttcctctagagtcctatatt 227



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 320 tctgagtcttcttctaaagtcccatattc 292



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| ||||||| |||||||||||||
Sbjct: 174 ctctgggctcccgtattcttcctctgagtctt 143



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 416 ccatattcgtcttctgagtcttc 438
           |||||||||||||||||||||||
Sbjct: 344 ccatattcgtcttctgagtcttc 322



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 356 tcttcttctgagtcttcctctaaagtaccatattt 390
           |||||||||||||||||||||| ||| | ||||||
Sbjct: 260 tcttcttctgagtcttcctctagagtcctatattt 226



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 489 tcccatattcctcttctgagtctttctct 517
           |||||||||| ||||||||||||| ||||
Sbjct: 346 tcccatattcgtcttctgagtcttcctct 318



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 416 ccatattcgtcttctgagtcttcttcta 443
           |||||||| |||||||||||||| ||||
Sbjct: 266 ccatattcttcttctgagtcttcctcta 239
to top
>gb|AF372208.1| Setaria palmifolia DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 504

 Score =  107 bits (54), Expect = 5e-20
 Identities = 89/103 (86%)
 Strand = Plus / Minus

                                                                       
Query: 287 cgatgctcaatcaaaccctcnnnnnnnaagatggaatcttcctctgggctctcgtattcg 346
           ||||||||||| ||||||||       |||||||||||||||||||||||| | ||||||
Sbjct: 504 cgatgctcaataaaaccctctttttttaagatggaatcttcctctgggctcccatattcg 445

                                                      
Query: 347 tcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           || ||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 444 tcttctgagtcttcctctgagtcttcttctaaagtcccatatt 402



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 78/93 (83%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| ||||| |||||| | |||||||| |||| ||||| || ||||||||||||||||
Sbjct: 305 cctctcgggtcttatattcgttctctgggctcccgtattcttcctctgagtctttctcta 246

                                            
Query: 519 aagtcctatattcgttctctgggttcccatatt 551
            || || |||||||| |||| || | |||||||
Sbjct: 245 gaggcccatattcgtcctctaggattccatatt 213



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 61/70 (87%), Gaps = 3/70 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||||||||||| |   ||||||| ||||||||||||||||||| | 
Sbjct: 237 tattcgtcctctaggattccatattca---tcttctagggtttcatattcgtcctctaga 181

                     
Query: 656 gtcctgtatt 665
           ||||| ||||
Sbjct: 180 gtcctatatt 171



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 62/71 (87%), Gaps = 1/71 (1%)
 Strand = Plus / Minus

                                                                       
Query: 648 cctctcgggtcctgtattccgtgttctanggtctcatattcctcttctgagtcttccgct 707
           ||||||||||||| ||||| || ||||  | |||||||||| || |||||||||||| ||
Sbjct: 140 cctctcgggtcctatattc-gttttctgggctctcatattcgtcctctgagtcttcctct 82

                      
Query: 708 cgagtcctata 718
           |||||||||||
Sbjct: 81  cgagtcctata 71



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                     
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||||||| ||||||||||||| ||||| |||||||||||
Sbjct: 377 tcccatattcttcttctgagtcttcctctagagtcctatatt 336



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                           
Query: 329 tctgggctctcgtattcgtcctctgagtcttc 360
           ||||||||||| ||||||||||||||||||||
Sbjct: 117 tctgggctctcatattcgtcctctgagtcttc 86



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 682 catattcctcttctgagtcttccgctcgagtcctatatt 720
           ||||||| ||||||||||||||| || ||||||||||||
Sbjct: 374 catattcttcttctgagtcttcctctagagtcctatatt 336



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||| | | |||||| || ||||||| || |||||||||| |||| 
Sbjct: 140 cctctcgggtcctatattcgttttctgggctctcatattcgtcctctgagtcttcctctc 81

                     
Query: 519 aagtcctata 528
            |||||||||
Sbjct: 80  gagtcctata 71



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| |||||||||||||||||||||||
Sbjct: 459 gggctcccatattcgtcttctgagtcttc 431



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 481 ctctgggttcccatattcctcttctgagtctttctct 517
           ||||||| |||||||||| ||||||||||||| ||||
Sbjct: 463 ctctgggctcccatattcgtcttctgagtcttcctct 427



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 429 tctgagtcttcttctaaagtcccatattc 401



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| ||||||| |||||||||||||
Sbjct: 283 ctctgggctcccgtattcttcctctgagtctt 252



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 356 tcttcttctgagtcttcctctaaagtaccatattt 390
           |||||||||||||||||||||| ||| | ||||||
Sbjct: 369 tcttcttctgagtcttcctctagagtcctatattt 335



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 566 ccatattcgttttctagggtttcatattcgt 596
           |||||||| | ||||||||||||||||||||
Sbjct: 219 ccatattcatcttctagggtttcatattcgt 189



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatttg 478
           |||||||  ||| |||||||||||||| | ||||||||||||
Sbjct: 210 tcttctagggtttcatattcgtcctctagagtcctatatttg 169



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 547 atatttgttttctgggctcccatattcgt 575
           ||||| ||||||||||||| |||||||||
Sbjct: 127 atattcgttttctgggctctcatattcgt 99



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 557 tctgggctcccatattcgttttct 580
           ||||||||||||||||||| ||||
Sbjct: 462 tctgggctcccatattcgtcttct 439



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 416 ccatattcgtcttctgagtcttcttcta 443
           |||||||| |||||||||||||| ||||
Sbjct: 375 ccatattcttcttctgagtcttcctcta 348



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                       
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||||| ||||||||||| |||  ||| | ||| || |||||| |||||| |||||
Sbjct: 107 catattcgtcctctgagtcttcctctcgagtcctatactcttcctctcgggtccgatatt 48
to top
>gb|L25386.1|SRLCPRPOC2 Spartina alterniflora chloroplast RNA polymerase beta-subunit
           (rpoC2) gene, partial cds
          Length = 483

 Score =  107 bits (54), Expect = 5e-20
 Identities = 102/118 (86%)
 Strand = Plus / Minus

                                                                       
Query: 434 tcttcttctaaagttccatattcgtcctcttgggtcctatatttgctctctgggttccca 493
           ||||| |||| ||||||||||||||||||| | ||  |||||| | ||||||||||||||
Sbjct: 355 tcttcctctagagttccatattcgtcctctcgagttttatattcgttctctgggttccca 296

                                                                     
Query: 494 tattcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccatatt 551
           ||||| ||||||||||||||||||| || |  |||||||| |||| || |||||||||
Sbjct: 295 tattcttcttctgagtctttctctagagcctcatattcgtcctctaggatcccatatt 238



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 69/76 (90%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           ||||| |||||||||||||||||| | |||||||||||||||||||| ||||||||||| 
Sbjct: 466 aagatagaatcttcctctgggctcccatattcgtcctctgagtcttcctctgagtcttct 407

                           
Query: 374 tctaaagtaccatatt 389
           |||||||  |||||||
Sbjct: 406 tctaaagccccatatt 391



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 50/57 (87%), Gaps = 3/57 (5%)
 Strand = Plus / Minus

                                                                    
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctct 652
           |||||||| |||||||| ||||||| |   ||||||| |||||||||||||||||||
Sbjct: 262 tattcgtcctctaggatcccatattca---tcttctagggtttcatattcgtcctct 209



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 246 tcccatattcatcttctagggtttcatattcgt 214



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| |||| |||||||||||||||
Sbjct: 158 ctctgggctctcatattggtcctctgagtcttc 126



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 428 tctgagtcttcttctaaagttccatattcgtcctct 463
           |||||||||||||||||||  |||||||||| ||||
Sbjct: 418 tctgagtcttcttctaaagccccatattcgttctct 383



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 626 tcttctanggtttcatattcgtcctctcgg 655
           ||||| | ||||||||||||||||||||||
Sbjct: 193 tcttccagggtttcatattcgtcctctcgg 164



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| ||||||||||| |||||||||||
Sbjct: 448 gggctcccatattcgtcctctgagtcttc 420



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 503 tctgagtctttctctaaagtcctatattcgttctctg 539
           ||||||||||  ||||||| || ||||||||||||||
Sbjct: 418 tctgagtcttcttctaaagccccatattcgttctctg 382



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                       
Query: 416 ccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           |||||||| |||||||||||||  |||| ||   |||||||||||||| || ||| ||||
Sbjct: 298 ccatattcttcttctgagtctttctctagagcctcatattcgtcctctaggatcccatat 239

            
Query: 476 t 476
           |
Sbjct: 238 t 238



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 568 atattcgttttctagggtttcatattcgt 596
           |||||||| ||| ||||||||||||||||
Sbjct: 200 atattcgtcttccagggtttcatattcgt 172
to top
>gb|AY174477.1| Cymbopogon citratus DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 539

 Score =  105 bits (53), Expect = 2e-19
 Identities = 83/93 (89%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||||| ||||| || |||||||||| || ||||||||||||||||
Sbjct: 361 cctctcgggtcctatatttgttctctaggctcccatattcttcctctgagtctttctcta 302

                                            
Query: 519 aagtcctatattcgttctctgggttcccatatt 551
            |||||||||||||| |||| || |||||||||
Sbjct: 301 gagtcctatattcgtcctctaggatcccatatt 269



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 57/63 (90%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           ||||| |||| ||||||||||||| | |||||||| ||||||||||| ||||||||||||
Sbjct: 527 aagatagaatyttcctctgggctcccatattcgtcttctgagtcttcctctgagtcttcc 468

              
Query: 374 tct 376
           |||
Sbjct: 467 tct 465



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 62/70 (88%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||||| |||||||| || ||||||| ||||||||||||| |||| 
Sbjct: 196 cctctcgggtcctatatttgttctctgggctctcatattcgtcttctgagtcttcctctc 137

                     
Query: 519 aagtcctata 528
            |||||||||
Sbjct: 136 gagtcctata 127



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           |||||||||| ||||||||||||||| |||||||||||||
Sbjct: 166 tctcatattcgtcttctgagtcttcctctcgagtcctata 127



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                      
Query: 347 tcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           |||||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 482 tcctctgagtcttcctctgagtcttcttctaaagtcccatatt 440



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 61/71 (85%), Gaps = 3/71 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |   ||||||| ||||||||||||||||||| | 
Sbjct: 293 tattcgtcctctaggatcccatattca---tcttctagggtttcatattcgtcctctaga 237

                      
Query: 656 gtcctgtattc 666
           ||||| |||||
Sbjct: 236 gtcctatattc 226



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                       
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||||||||||||||||| |||  ||| | ||| || ||||||||||||| |||||
Sbjct: 163 catattcgtcttctgagtcttcctctcgagtcctatactcttcctcttgggtccgatatt 104



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| |||||||||||||||||||||||
Sbjct: 509 gggctcccatattcgtcttctgagtcttc 481



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 481 ctctgggttcccatattcctcttctgagtctttctct 517
           ||||||| |||||||||| ||||||||||||| ||||
Sbjct: 513 ctctgggctcccatattcgtcttctgagtcttcctct 477



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 467 tctgagtcttcttctaaagtcccatattc 439



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 277 tcccatattcatcttctagggtttcatattcgt 245



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| |||||||| |||||||||||
Sbjct: 174 ctctgggctctcatattcgtcttctgagtcttc 142



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 489 tcccatattcctcttctgagtctttctcta 518
           |||||||||| ||||||||||||| |||||
Sbjct: 412 tcccatattcttcttctgagtcttcctcta 383



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 356 tcttcttctgagtcttcctcta 377
           ||||||||||||||||||||||
Sbjct: 404 tcttcttctgagtcttcctcta 383



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                       
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcc 470
           |||| |||||||| || ||||||||||  |||| ||| | ||||||||||||| || |||
Sbjct: 334 ggctcccatattcttcctctgagtctttctctagagtcctatattcgtcctctaggatcc 275

                 
Query: 471 tatatt 476
            |||||
Sbjct: 274 catatt 269



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 596 tattcgtcttctaggattccatatt 620
           |||||||||||||||||| ||||||
Sbjct: 230 tattcgtcttctaggatttcatatt 206



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 557 tctgggctcccatattcgttttct 580
           ||||||||||||||||||| ||||
Sbjct: 512 tctgggctcccatattcgtcttct 489



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| || |||||||||| | || |||||||||||||
Sbjct: 328 catattcttcctctgagtctttctctagagtcctatattc 289



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 266 tcttctagggtttcatattcgtcctctagagtcctatatt 227



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 568 atattcgttttctagggtttcatattcg 595
           |||||||| ||||||| |||||||||||
Sbjct: 231 atattcgtcttctaggatttcatattcg 204
to top
>gb|AY174476.1| Coix lacryma-jobi DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 549

 Score =  105 bits (53), Expect = 2e-19
 Identities = 83/93 (89%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||||| ||||| || |||||||||| || ||||||||||||||||
Sbjct: 346 cctctcgggtcctatatttgttctctaggctcccatattcttcctctgagtctttctcta 287

                                            
Query: 519 aagtcctatattcgttctctgggttcccatatt 551
            |||||||||||||| |||| || |||||||||
Sbjct: 286 gagtcctatattcgtcctctaggatcccatatt 254



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 86/103 (83%)
 Strand = Plus / Minus

                                                                       
Query: 274 ttcttttgttcctcgatgctcaatcaaaccctcnnnnnnnaagatggaatcttcctctgg 333
           |||||||||||||||||||||||| ||||||||       ||||| |||| |||||| ||
Sbjct: 549 ttcttttgttcctcgatgctcaataaaaccctctttttttaagatagaattttcctccgg 490

                                                      
Query: 334 gctctcgtattcgtcctctgagtcttcttctgagtcttcctct 376
           |||| | |||||||| ||||||||||| ||| ||| |||||||
Sbjct: 489 gctcccatattcgtcttctgagtcttcctctaagtattcctct 447



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 62/70 (88%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||||| |||||||| || ||||||| ||||||||||||| |||| 
Sbjct: 181 cctctcgggtcctatatttgttctctgggctctcatattcgtcttctgagtcttcctctc 122

                     
Query: 519 aagtcctata 528
            |||||||||
Sbjct: 121 gagtcctata 112



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           |||||||||| ||||||||||||||| |||||||||||||
Sbjct: 151 tctcatattcgtcttctgagtcttcctctcgagtcctata 112



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 61/71 (85%), Gaps = 3/71 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |   ||||||| ||||||||||||||||||| | 
Sbjct: 278 tattcgtcctctaggatcccatattca---tcttctagggtttcatattcgtcctctaga 222

                      
Query: 656 gtcctgtattc 666
           ||||| |||||
Sbjct: 221 gtcctatattc 211



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 410 gggctgccatattcgtcttctgagtcttcttctaa 444
           ||||| ||||||||||||||||||||||| |||||
Sbjct: 491 gggctcccatattcgtcttctgagtcttcctctaa 457



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 449 tctgagtcttcttctaaagtcccatattc 421



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 262 tcccatattcatcttctagggtttcatattcgt 230



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| |||||||| |||||||||||
Sbjct: 159 ctctgggctctcatattcgtcttctgagtcttc 127



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                       
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||||||||||||||||| |||  ||| | ||| || |||||| |||||| |||||
Sbjct: 148 catattcgtcttctgagtcttcctctcgagtcctatactcttcctctcgggtccgatatt 89



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 489 tcccatattcctcttctgagtctttctctaa 519
           |||||||||| ||||||||||||| ||||||
Sbjct: 487 tcccatattcgtcttctgagtcttcctctaa 457



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 347 tcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           |||||| ||| ||| ||||||||||| |||||||| |||||||
Sbjct: 464 tcctctaagtattcctctgagtcttcttctaaagtcccatatt 422



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 489 tcccatattcctcttctgagtctttctcta 518
           |||||||||| ||||||||||||| |||||
Sbjct: 397 tcccatattcttcttctgagtcttcctcta 368



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 356 tcttcttctgagtcttcctcta 377
           ||||||||||||||||||||||
Sbjct: 389 tcttcttctgagtcttcctcta 368



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                       
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcc 470
           |||| |||||||| || ||||||||||  |||| ||| | ||||||||||||| || |||
Sbjct: 319 ggctcccatattcttcctctgagtctttctctagagtcctatattcgtcctctaggatcc 260

                 
Query: 471 tatatt 476
            |||||
Sbjct: 259 catatt 254



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 596 tattcgtcttctaggattccatatt 620
           |||||||||||||||||| ||||||
Sbjct: 215 tattcgtcttctaggatttcatatt 191



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 359 tcttctgagtcttcctctaa 378
           ||||||||||||||||||||
Sbjct: 476 tcttctgagtcttcctctaa 457



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| || |||||||||| | || |||||||||||||
Sbjct: 313 catattcttcctctgagtctttctctagagtcctatattc 274



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 251 tcttctagggtttcatattcgtcctctagagtcctatatt 212



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 568 atattcgttttctagggtttcatattcg 595
           |||||||| ||||||| |||||||||||
Sbjct: 216 atattcgtcttctaggatttcatattcg 189
to top
>gb|AF372179.1| Melinis minutiflora DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 446

 Score =  105 bits (53), Expect = 2e-19
 Identities = 91/106 (85%)
 Strand = Plus / Minus

                                                                       
Query: 284 cctcgatgctcaatcaaaccctcnnnnnnnaagatggaatcttcctctgggctctcgtat 343
           |||||||||||||| ||||||||       ||||||||||||||||| |||||| | |||
Sbjct: 446 cctcgatgctcaataaaaccctctttttttaagatggaatcttcctccgggctcccatat 387

                                                         
Query: 344 tcgtcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           ||||| ||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 386 tcgtcttctgagtcttcctctgagtcttcttctaaagtcccatatt 341



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 81/93 (87%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| ||||| |||||| | |||||||| |||| ||||| || ||||||||||||||||
Sbjct: 277 cctctcgggtcttatattcgttctctgggctcccgtattcttcctctgagtctttctcta 218

                                            
Query: 519 aagtcctatattcgttctctgggttcccatatt 551
            |||||||||||||| |||| || |||||||||
Sbjct: 217 gagtcctatattcgtcctctaggatcccatatt 185



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 36/37 (97%)
 Strand = Plus / Minus

                                                
Query: 328 ctctgggctctcgtattcgtcctctgagtcttcttct 364
           |||||||||||| ||||||||||||||||||||||||
Sbjct: 90  ctctgggctctcatattcgtcctctgagtcttcttct 54



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                     
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||||||| ||||||||||||| ||||| |||||||||||
Sbjct: 349 tcccatattcttcttctgagtcttcctctagagtcctatatt 308



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 682 catattcctcttctgagtcttccgctcgagtcctatatt 720
           ||||||| ||||||||||||||| || ||||||||||||
Sbjct: 346 catattcttcttctgagtcttcctctagagtcctatatt 308



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| |||||||||||||||||||||||
Sbjct: 398 gggctcccatattcgtcttctgagtcttc 370



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 368 tctgagtcttcttctaaagtcccatattc 340



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| ||||||| |||||||||||||
Sbjct: 255 ctctgggctcccgtattcttcctctgagtctt 224



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 49/57 (85%), Gaps = 3/57 (5%)
 Strand = Plus / Minus

                                                                    
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctct 652
           |||||||| |||||||| ||||||| |   ||||||| |||||| ||||||||||||
Sbjct: 209 tattcgtcctctaggatcccatattca---tcttctagggtttcgtattcgtcctct 156



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           |||||||||| || |||||||||||  |||||||||||||
Sbjct: 82  tctcatattcgtcctctgagtcttcttctcgagtcctata 43



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 356 tcttcttctgagtcttcctctaaagtaccatattt 390
           |||||||||||||||||||||| ||| | ||||||
Sbjct: 341 tcttcttctgagtcttcctctagagtcctatattt 307



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 417 catattcgtcttctgagtcttcttct 442
           |||||||||| |||||||||||||||
Sbjct: 79  catattcgtcctctgagtcttcttct 54



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 489 tcccatattcctcttctgagtctttctct 517
           |||||||||| ||||||||||||| ||||
Sbjct: 394 tcccatattcgtcttctgagtcttcctct 366



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | |||||||||||| |||||||
Sbjct: 193 tcccatattcatcttctagggtttcgtattcgt 161



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 416 ccatattcgtcttctgagtcttcttcta 443
           |||||||| |||||||||||||| ||||
Sbjct: 347 ccatattcttcttctgagtcttcctcta 320
to top
>gb|AF372165.1| Cenchrus agrimonioides DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 494

 Score =  105 bits (53), Expect = 2e-19
 Identities = 94/110 (85%)
 Strand = Plus / Minus

                                                                       
Query: 280 tgttcctcgatgctcaatcaaaccctcnnnnnnnaagatggaatcttcctctgggctctc 339
           |||||||||||||||||| |||| |||       ||||||||||||||||| |||||| |
Sbjct: 492 tgttcctcgatgctcaataaaactctctttttttaagatggaatcttcctcggggctccc 433

                                                             
Query: 340 gtattcgtcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
            |||||||| ||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 432 atattcgtcttctgagtcttcctctgagtcttcttctaaagtcccatatt 383



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 62/72 (86%)
 Strand = Plus / Minus

                                                                       
Query: 480 tctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttctctg 539
           |||||||| |||| ||||| || |||||||||||||||| || || |||||||| |||| 
Sbjct: 271 tctctgggctcccgtattcttcctctgagtctttctctagaggcccatattcgtcctcta 212

                       
Query: 540 ggttcccatatt 551
           || |||||||||
Sbjct: 211 ggatcccatatt 200



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 62/71 (87%), Gaps = 1/71 (1%)
 Strand = Plus / Minus

                                                                       
Query: 648 cctctcgggtcctgtattccgtgttctanggtctcatattcctcttctgagtcttccgct 707
           ||||||||||||| ||||| || ||||  | |||||||||| || |||||||||||| ||
Sbjct: 127 cctctcgggtcctatattc-gttttctgggctctcatattcgtcctctgagtcttcctct 69

                      
Query: 708 cgagtcctata 718
           |||||||||||
Sbjct: 68  cgagtcctata 58



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                     
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||||||| ||||||||||||| ||||| |||||||||||
Sbjct: 358 tcccatattcttcttctgagtcttcctctatagtcctatatt 317



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 60/70 (85%), Gaps = 3/70 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |   ||||||| ||||||||||||||||||| | 
Sbjct: 224 tattcgtcctctaggatcccatattca---tcttctagggtttcatattcgtcctctaga 168

                     
Query: 656 gtcctgtatt 665
           ||||| ||||
Sbjct: 167 gtcctatatt 158



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                               
Query: 403 ttccccggggctgccatattcgtcttctgagtcttc 438
           |||| ||||||| |||||||||||||||||||||||
Sbjct: 447 ttcctcggggctcccatattcgtcttctgagtcttc 412



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                           
Query: 329 tctgggctctcgtattcgtcctctgagtcttc 360
           ||||||||||| ||||||||||||||||||||
Sbjct: 104 tctgggctctcatattcgtcctctgagtcttc 73



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||| | | |||||| || ||||||| || |||||||||| |||| 
Sbjct: 127 cctctcgggtcctatattcgttttctgggctctcatattcgtcctctgagtcttcctctc 68

                     
Query: 519 aagtcctata 528
            |||||||||
Sbjct: 67  gagtcctata 58



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 410 tctgagtcttcttctaaagtcccatattc 382



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 208 tcccatattcatcttctagggtttcatattcgt 176



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| ||||||| |||||||||||||
Sbjct: 270 ctctgggctcccgtattcttcctctgagtctt 239



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 682 catattcctcttctgagtcttccgctcgagtcctatatt 720
           ||||||| ||||||||||||||| ||  |||||||||||
Sbjct: 355 catattcttcttctgagtcttcctctatagtcctatatt 317



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 356 tcttcttctgagtcttcctctaaagtaccatattt 390
           |||||||||||||||||||||| ||| | ||||||
Sbjct: 350 tcttcttctgagtcttcctctatagtcctatattt 316



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatttg 478
           |||||||  ||| |||||||||||||| | ||||||||||||
Sbjct: 197 tcttctagggtttcatattcgtcctctagagtcctatatttg 156



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 489 tcccatattcctcttctgagtctttctct 517
           |||||||||| ||||||||||||| ||||
Sbjct: 436 tcccatattcgtcttctgagtcttcctct 408



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 547 atatttgttttctgggctcccatattcgt 575
           ||||| ||||||||||||| |||||||||
Sbjct: 114 atattcgttttctgggctctcatattcgt 86



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 416 ccatattcgtcttctgagtcttcttcta 443
           |||||||| |||||||||||||| ||||
Sbjct: 356 ccatattcttcttctgagtcttcctcta 329



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                       
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||||| ||||||||||| |||  ||| | ||| || |||||| |||||| |||||
Sbjct: 94  catattcgtcctctgagtcttcctctcgagtcctatactcttcctctcgggtccgatatt 35
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>gb|AF064759.1|AF064759 Anomochloa marantoidea DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, chloroplast gene encoding chloroplast
           protein, partial cds
          Length = 509

 Score =  105 bits (53), Expect = 2e-19
 Identities = 108/129 (83%), Gaps = 6/129 (4%)
 Strand = Plus / Minus

                                                                       
Query: 243 gatctacttctttttggtattttagactaaattcttttgttcctcgatgctcaatcaaac 302
           ||||||||||||||| |||||||||||| ||| |||||||| ||||||||||||||||||
Sbjct: 475 gatctacttcttttttgtattttagactcaatccttttgttactcgatgctcaatcaaac 416

                                                                       
Query: 303 cctcnnnnnnnaagatggaatcttcctctgggctc------tcgtattcgtcctctgagt 356
           ||||       || | |||||||||||||||| ||      |||||||||||||||||||
Sbjct: 415 cctcttttttaaaaaaggaatcttcctctgggatcccatcttcgtattcgtcctctgagt 356

                    
Query: 357 cttcttctg 365
           |||| ||||
Sbjct: 355 cttcctctg 347



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 338 tcgtattcgtcctctgagtcttcttctg 365
           ||||||||||||||||||||||| ||||
Sbjct: 335 tcgtattcgtcctctgagtcttcctctg 308



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 338 tcgtattcgtcctctgagtcttcttctg 365
           ||||||||||||||||||||||| ||||
Sbjct: 296 tcgtattcgtcctctgagtcttcctctg 269



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 338 tcgtattcgtcctctgagtcttc 360
           |||||||||||||||||||||||
Sbjct: 236 tcgtattcgtcctctgagtcttc 214



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 494 tattcctcttctgagtctttctctaaagtcctatattcgttctctg 539
           ||||| || |||||||||| |||||  ||||||||||||| |||||
Sbjct: 233 tattcgtcctctgagtcttcctctagggtcctatattcgtactctg 188
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>gb|U96307.1|PMU96307 Pseudopentameris macrantha RNA polymerase beta-subunit (rpoC2)
           gene, chloroplast gene encoding chloroplast protein,
           partial cds
          Length = 480

 Score =  105 bits (53), Expect = 2e-19
 Identities = 70/76 (92%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           |||| |||| |||||||||||||| |||||||||||||||||||||| ||||||||||| 
Sbjct: 468 aagagggaancttcctctgggctcccgtattcgtcctctgagtcttcctctgagtcttct 409

                           
Query: 374 tctaaagtaccatatt 389
           |||||||| |||||||
Sbjct: 408 tctaaagtcccatatt 393



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 88/102 (86%)
 Strand = Plus / Minus

                                                                       
Query: 450 catattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttctgagt 509
           |||||||||| ||| ||||| |||||| | | |||||| |||||||||| || |||||||
Sbjct: 344 catattcgtcttctcgggtcttatattcgttttctgggctcccatattcttcctctgagt 285

                                                     
Query: 510 ctttctctaaagtcctatattcgttctctgggttcccatatt 551
           ||||||||| |||||||||||||| |||| || |||| ||||
Sbjct: 284 ctttctctagagtcctatattcgtcctctaggatcccgtatt 243



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 80/96 (83%), Gaps = 1/96 (1%)
 Strand = Plus / Minus

                                                                       
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
           ||||||  ||||||||||||||| ||||||||| | |||| ||| ||||  | || ||||
Sbjct: 357 tcttctcgggtttcatattcgtcttctcgggtcttatatt-cgttttctgggctcccata 299

                                               
Query: 686 ttcctcttctgagtcttccgctcgagtcctatattc 721
           ||| || |||||||||| | || |||||||||||||
Sbjct: 298 ttcttcctctgagtctttctctagagtcctatattc 263



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 671 ttctanggtctcatattcctcttctgagtcttccgctcgagtcctata 718
           ||||| | |||| ||||| ||||||||||||||| |||||||||||||
Sbjct: 121 ttctaggctctcgtattcttcttctgagtcttcctctcgagtcctata 74



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                          
Query: 428 tctgagtcttcttctaaagttccatattcgt 458
           |||||||||||||||||||| ||||||||||
Sbjct: 420 tctgagtcttcttctaaagtcccatattcgt 390



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 561 ggctcccatattcgttttctagggtttcatattcgt 596
           ||||||||||||| | |||| |||||||||||||||
Sbjct: 371 ggctcccatattcatcttctcgggtttcatattcgt 336



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 547 atatttgttttctgggctcccatattc 573
           ||||| |||||||||||||||||||||
Sbjct: 322 atattcgttttctgggctcccatattc 296



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 564 tcccatattcgttttctagggtttcatattc 594
           |||| ||||||| ||||||||||||||||||
Sbjct: 251 tcccgtattcgtcttctagggtttcatattc 221



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                 
Query: 410 gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctct 463
           ||||| |||||||| || ||||||||||  |||| ||| | |||||||||||||
Sbjct: 309 gggctcccatattcttcctctgagtctttctctagagtcctatattcgtcctct 256



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 356 tcttcttctgagtcttcctct 376
           |||||||||||||||||||||
Sbjct: 105 tcttcttctgagtcttcctct 85



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                    
Query: 419 tattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           ||||| |||||||||||||| |||  ||| | ||| || |||||| |||||||||||
Sbjct: 108 tattcttcttctgagtcttcctctcgagtcctatactcttcctctagggtcctatat 52



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                      
Query: 626 tcttctanggtttcatattcgtcctct 652
           ||||||| |||||||||||| ||||||
Sbjct: 240 tcttctagggtttcatattcttcctct 214



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 564 tcccatattcgttttctagggtttcatattcg 595
           |||||||||| | |||| ||||||||||||||
Sbjct: 209 tcccatattcatcttctcgggtttcatattcg 178



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 333 ggctctcgtattcgtcctctgagtcttc 360
           ||||||||||||| || |||||||||||
Sbjct: 116 ggctctcgtattcttcttctgagtcttc 89
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>gb|AF372207.1| Sacciolepis indica DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 463

 Score =  103 bits (52), Expect = 8e-19
 Identities = 70/76 (92%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           |||||||||||||||||||||||| | |||||||| ||||||||||| ||||||||||| 
Sbjct: 440 aagatggaatcttcctctgggctcccatattcgtcttctgagtcttcctctgagtcttct 381

                           
Query: 374 tctaaagtaccatatt 389
           |||||||| |||||||
Sbjct: 380 tctaaagtcccatatt 365



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 69/81 (85%)
 Strand = Plus / Minus

                                                                       
Query: 471 tatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||| | |||||||| | || ||||| || |||||||||||||||| |||||||||||
Sbjct: 256 tatattcgttctctgggctaccgtattcttcctctgagtctttctctagagtcctatatt 197

                                
Query: 531 cgttctctgggttcccatatt 551
            || |||| || |||||||||
Sbjct: 196 tgtcctctaggatcccatatt 176



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                        
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgt 533
           |||||||||| |||||||| |||| ||||| ||||||||||||||
Sbjct: 340 tcccatattcttcttctgaatcttcctctagagtcctatattcgt 296



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 520 agtcctatattcgttctctgggttcccatatttgt 554
           |||| ||||||||||||||||| ||||||||||||
Sbjct: 96  agtcttatattcgttctctgggctcccatatttgt 62



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                             
Query: 547 atatttgttttctgggctcccatattcgttttctagggtttcatattcgt 596
           ||||||||  ||| || |||||||||| | ||||||||||||||||||||
Sbjct: 201 atatttgtcctctaggatcccatattcatcttctagggtttcatattcgt 152



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattc 666
           ||||||| ||||||||||||||||||| | ||||| |||||
Sbjct: 173 tcttctagggtttcatattcgtcctctagagtcctatattc 133



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| |||||||||||||||||||||||
Sbjct: 422 gggctcccatattcgtcttctgagtcttc 394



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 481 ctctgggttcccatattcctcttctgagtctttctct 517
           ||||||| |||||||||| ||||||||||||| ||||
Sbjct: 426 ctctgggctcccatattcgtcttctgagtcttcctct 390



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 392 tctgagtcttcttctaaagtcccatattc 364



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| |||||||| |||||| || |||||||||||||
Sbjct: 337 catattcttcttctgaatcttcctctagagtcctatattc 298



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 596 tattcgtcttctaggattccatatt 620
           |||||||||||||||||| ||||||
Sbjct: 302 tattcgtcttctaggatttcatatt 278



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||| | |||| |||||||||||||||
Sbjct: 81  ctctgggctcccatatttgtcctctgagtcttc 49



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 557 tctgggctcccatattcgttttct 580
           ||||||||||||||||||| ||||
Sbjct: 425 tctgggctcccatattcgtcttct 402



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 568 atattcgttttctagggtttcatattcg 595
           |||||||| ||||||| |||||||||||
Sbjct: 303 atattcgtcttctaggatttcatattcg 276



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||  ||||||| |||||||||||||
Sbjct: 246 ctctgggctaccgtattcttcctctgagtctt 215



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 173 tcttctagggtttcatattcgtcctctagagtcctatatt 134
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>gb|L25378.1|EHHCORPOC2 Ehrharta stipoides chloroplast RNA polymerase beta-subunit (rpoC2)
           gene, partial cds
          Length = 522

 Score =  103 bits (52), Expect = 8e-19
 Identities = 106/124 (85%)
 Strand = Plus / Minus

                                                                       
Query: 428 tctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatttgctctctggg 487
           ||||||||||| |||||| ||||||||||||||||| |||| ||||||| | ||||||| 
Sbjct: 412 tctgagtcttcctctaaaattccatattcgtcctctcgggttctatattcgttctctgga 353

                                                                       
Query: 488 ttcccatattcctcttctgagtctttctctaaagtcctatattcgttctctgggttccca 547
            | ||||||||  | |||||||||| ||||| |||||||||||||   |||||| |||||
Sbjct: 352 cttccatattcggcctctgagtcttcctctagagtcctatattcgccttctgggatccca 293

               
Query: 548 tatt 551
           ||||
Sbjct: 292 tatt 289



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 64/69 (92%), Gaps = 2/69 (2%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcc-tctgagtcttcttctgagtcttc 372
           ||||||||||| |||| ||||||| ||||||||||| ||||||||||| |||||||||||
Sbjct: 505 aagatggaatcctcctgtgggctc-cgtattcgtccctctgagtcttcctctgagtcttc 447

                    
Query: 373 ctctaaagt 381
           |||||||||
Sbjct: 446 ctctaaagt 438



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                            
Query: 341 tattcgtcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           ||||||||||| |||||||| |||||||||||||||||| | |||||||
Sbjct: 433 tattcgtcctccgagtcttcctctgagtcttcctctaaaattccatatt 385



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 94/115 (81%)
 Strand = Plus / Minus

                                                                       
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatttgctctctgggttcccatat 496
           ||||||| ||||  |||||| |||||| ||||||||||||   | |||||| ||||||||
Sbjct: 202 tcttctagagtttgatattcttcctctcgggtcctatattcattttctgggctcccatat 143

                                                                  
Query: 497 tcctcttctgagtctttctctaaagtcctatattcgttctctgggttcccatatt 551
           || || ||| |||||| ||||   ||||||||||||| |||| || ||| |||||
Sbjct: 142 tcgtcctctaagtcttcctctcgggtcctatattcgtcctctcggatcctatatt 88



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 84/102 (82%), Gaps = 9/102 (8%)
 Strand = Plus / Minus

                                                                       
Query: 556 ttctgggctcccatattcgttttctagggtttcatattcgtattcgtcttctaggattcc 615
           ||||||| |||||||||||| |||||| ||||||      ||||| || |||||||| ||
Sbjct: 305 ttctgggatcccatattcgtcttctagagtttca------tattcctcctctaggatccc 252

                                                     
Query: 616 atatttagattcttctanggtttcatattcgtcctctcgggt 657
           ||||| |   ||||||| ||||||||||||||||||| ||||
Sbjct: 251 atattca---tcttctagggtttcatattcgtcctctagggt 213



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 126/158 (79%), Gaps = 10/158 (6%)
 Strand = Plus / Minus

                                                                       
Query: 564 tcccatattcgttttctagggtttcatattcgtattcgtcttctaggattccatatttag 623
           |||||||||| | ||||||||||||||||||||      | |||||| ||| ||||||  
Sbjct: 255 tcccatattcatcttctagggtttcatattcgt------cctctagggttcgatatttg- 203

                                                                       
Query: 624 attcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctca 683
             |||||||  |||| |||||| |||||||||||||| |||||  | ||||  | || ||
Sbjct: 202 --tcttctagagtttgatattcttcctctcgggtcctatattcatt-ttctgggctccca 146

                                                 
Query: 684 tattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||| || ||| |||||||| |||| |||||||||||
Sbjct: 145 tattcgtcctctaagtcttcctctcgggtcctatattc 108



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 503 tctgagtctttctctaaagtcctatattcgt 533
           |||||||||| ||||||||||| ||||||||
Sbjct: 457 tctgagtcttcctctaaagtccaatattcgt 427



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 428 tctgagtcttcttctaaagttccatattcgtcctc 462
           ||||||||||| |||||||| | ||||||||||||
Sbjct: 457 tctgagtcttcctctaaagtccaatattcgtcctc 423



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 56/67 (83%)
 Strand = Plus / Minus

                                                                       
Query: 410 gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtc 469
           ||||| ||||||||||| ||| ||||||| |||   || | ||||||||||||| || ||
Sbjct: 154 gggctcccatattcgtcctctaagtcttcctctcgggtcctatattcgtcctctcggatc 95

                  
Query: 470 ctatatt 476
           |||||||
Sbjct: 94  ctatatt 88



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 554 ttttctgggctcccatattcgt 575
           ||||||||||||||||||||||
Sbjct: 160 ttttctgggctcccatattcgt 139



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 70/85 (82%), Gaps = 5/85 (5%)
 Strand = Plus / Minus

                                                                       
Query: 639 catattcgtcctctcgggtcctgtattccgtgttctanggtct--catattcctcttctg 696
           ||||||||||||||||||| || |||||   |||||  || ||  |||||||  | ||||
Sbjct: 390 catattcgtcctctcgggttctatattc---gttctctggacttccatattcggcctctg 334

                                    
Query: 697 agtcttccgctcgagtcctatattc 721
           |||||||| || |||||||||||||
Sbjct: 333 agtcttcctctagagtcctatattc 309



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 329 tctgggctctcgtattcgtcctctgagtcttc 360
           ||||||||| | |||||||||||| |||||||
Sbjct: 157 tctgggctcccatattcgtcctctaagtcttc 126
to top
>dbj|AP006955.1| Saccharum spontaneum  chloroplast gene for RNA polymerase betaII
           subunit, partial cds, strain: Jw385, clone: SJw-27kb
          Length = 508

 Score =  101 bits (51), Expect = 3e-18
 Identities = 81/91 (89%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||||| ||||| || |||||||||| || ||||||||||||||||
Sbjct: 497 cctctcgggtcctatatttgttctctaggctcccatattcttcctctgagtctttctcta 438

                                          
Query: 519 aagtcctatattcgttctctgggttcccata 549
            |||||||||||||| |||| || |||||||
Sbjct: 437 gagtcctatattcgtcctctaggatcccata 407



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 62/70 (88%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||||| |||||||| || ||||||| ||||||||||||| |||| 
Sbjct: 332 cctctcgggtcctatatttgttctctgggctctcatattcgtcttctgagtcttcctctc 273

                     
Query: 519 aagtcctata 528
            |||||||||
Sbjct: 272 gagtcctata 263



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           |||||||||| ||||||||||||||| |||||||||||||
Sbjct: 302 tctcatattcgtcttctgagtcttcctctcgagtcctata 263



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattc 666
           ||||||| ||||||||||||||||||| | ||||| |||||
Sbjct: 402 tcttctagggtttcatattcgtcctctagagtcctatattc 362



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| |||||||| |||||||||||
Sbjct: 310 ctctgggctctcatattcgtcttctgagtcttc 278



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                       
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||||||||||||||||| |||  ||| | ||| || |||||| |||||| |||||
Sbjct: 299 catattcgtcttctgagtcttcctctcgagtcctatactcttcctctcgggtccgatatt 240



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctct 463
           |||| |||||||| || ||||||||||  |||| ||| | |||||||||||||
Sbjct: 470 ggctcccatattcttcctctgagtctttctctagagtcctatattcgtcctct 418



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           ||||||| || | ||||||||||||||||||||
Sbjct: 413 tcccatactcatcttctagggtttcatattcgt 381



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 596 tattcgtcttctaggattccatatt 620
           |||||||||||||||||| ||||||
Sbjct: 366 tattcgtcttctaggatttcatatt 342



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| || |||||||||| | || |||||||||||||
Sbjct: 464 catattcttcctctgagtctttctctagagtcctatattc 425



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 402 tcttctagggtttcatattcgtcctctagagtcctatatt 363



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 568 atattcgttttctagggtttcatattcg 595
           |||||||| ||||||| |||||||||||
Sbjct: 367 atattcgtcttctaggatttcatattcg 340
to top
>dbj|AP006954.1| Saccharum spontaneum chloroplast gene for RNA polymerase betaII
           subunit, partial cds, strain: Glagah, clone: SGl-27kb
          Length = 508

 Score =  101 bits (51), Expect = 3e-18
 Identities = 81/91 (89%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||||| ||||| || |||||||||| || ||||||||||||||||
Sbjct: 497 cctctcgggtcctatatttgttctctaggctcccatattcttcctctgagtctttctcta 438

                                          
Query: 519 aagtcctatattcgttctctgggttcccata 549
            |||||||||||||| |||| || |||||||
Sbjct: 437 gagtcctatattcgtcctctaggatcccata 407



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 62/70 (88%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||||| |||||||| || ||||||| ||||||||||||| |||| 
Sbjct: 332 cctctcgggtcctatatttgttctctgggctctcatattcgtcttctgagtcttcctctc 273

                     
Query: 519 aagtcctata 528
            |||||||||
Sbjct: 272 gagtcctata 263



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           |||||||||| ||||||||||||||| |||||||||||||
Sbjct: 302 tctcatattcgtcttctgagtcttcctctcgagtcctata 263



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattc 666
           ||||||| ||||||||||||||||||| | ||||| |||||
Sbjct: 402 tcttctagggtttcatattcgtcctctagagtcctatattc 362



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| |||||||| |||||||||||
Sbjct: 310 ctctgggctctcatattcgtcttctgagtcttc 278



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                       
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||||||||||||||||| |||  ||| | ||| || |||||| |||||| |||||
Sbjct: 299 catattcgtcttctgagtcttcctctcgagtcctatactcttcctctcgggtccgatatt 240



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctct 463
           |||| |||||||| || ||||||||||  |||| ||| | |||||||||||||
Sbjct: 470 ggctcccatattcttcctctgagtctttctctagagtcctatattcgtcctct 418



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           ||||||| || | ||||||||||||||||||||
Sbjct: 413 tcccatactcatcttctagggtttcatattcgt 381



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 596 tattcgtcttctaggattccatatt 620
           |||||||||||||||||| ||||||
Sbjct: 366 tattcgtcttctaggatttcatatt 342



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| || |||||||||| | || |||||||||||||
Sbjct: 464 catattcttcctctgagtctttctctagagtcctatattc 425



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 402 tcttctagggtttcatattcgtcctctagagtcctatatt 363



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 568 atattcgttttctagggtttcatattcg 595
           |||||||| ||||||| |||||||||||
Sbjct: 367 atattcgtcttctaggatttcatattcg 340
to top
>dbj|AP006953.1| Saccharum officinarum chloroplast gene for RNA polymerase betaII
           subunit, partial cds, strain: Fiji40, clone: OFi-27kb
          Length = 508

 Score =  101 bits (51), Expect = 3e-18
 Identities = 81/91 (89%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||||| ||||| || |||||||||| || ||||||||||||||||
Sbjct: 497 cctctcgggtcctatatttgttctctaggctcccatattcttcctctgagtctttctcta 438

                                          
Query: 519 aagtcctatattcgttctctgggttcccata 549
            |||||||||||||| |||| || |||||||
Sbjct: 437 gagtcctatattcgtcctctaggatcccata 407



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 62/70 (88%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||||| |||||||| || ||||||| ||||||||||||| |||| 
Sbjct: 332 cctctcgggtcctatatttgttctctgggctctcatattcgtcttctgagtcttcctctc 273

                     
Query: 519 aagtcctata 528
            |||||||||
Sbjct: 272 gagtcctata 263



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           |||||||||| ||||||||||||||| |||||||||||||
Sbjct: 302 tctcatattcgtcttctgagtcttcctctcgagtcctata 263



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattc 666
           ||||||| ||||||||||||||||||| | ||||| |||||
Sbjct: 402 tcttctagggtttcatattcgtcctctagagtcctatattc 362



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| |||||||| |||||||||||
Sbjct: 310 ctctgggctctcatattcgtcttctgagtcttc 278



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                       
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||||||||||||||||| |||  ||| | ||| || |||||| |||||| |||||
Sbjct: 299 catattcgtcttctgagtcttcctctcgagtcctatactcttcctctcgggtccgatatt 240



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctct 463
           |||| |||||||| || ||||||||||  |||| ||| | |||||||||||||
Sbjct: 470 ggctcccatattcttcctctgagtctttctctagagtcctatattcgtcctct 418



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           ||||||| || | ||||||||||||||||||||
Sbjct: 413 tcccatactcatcttctagggtttcatattcgt 381



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 596 tattcgtcttctaggattccatatt 620
           |||||||||||||||||| ||||||
Sbjct: 366 tattcgtcttctaggatttcatatt 342



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| || |||||||||| | || |||||||||||||
Sbjct: 464 catattcttcctctgagtctttctctagagtcctatattc 425



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 402 tcttctagggtttcatattcgtcctctagagtcctatatt 363



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 568 atattcgttttctagggtttcatattcg 595
           |||||||| ||||||| |||||||||||
Sbjct: 367 atattcgtcttctaggatttcatattcg 340
to top
>dbj|AP006952.1| Saccharum officinarum chloroplast gene for RNA polymerase betaII
           subunit, partial cds, strain: Badila, clone: OBa-27kb
          Length = 508

 Score =  101 bits (51), Expect = 3e-18
 Identities = 81/91 (89%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||||| ||||| || |||||||||| || ||||||||||||||||
Sbjct: 497 cctctcgggtcctatatttgttctctaggctcccatattcttcctctgagtctttctcta 438

                                          
Query: 519 aagtcctatattcgttctctgggttcccata 549
            |||||||||||||| |||| || |||||||
Sbjct: 437 gagtcctatattcgtcctctaggatcccata 407



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 62/70 (88%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||||| |||||||| || ||||||| ||||||||||||| |||| 
Sbjct: 332 cctctcgggtcctatatttgttctctgggctctcatattcgtcttctgagtcttcctctc 273

                     
Query: 519 aagtcctata 528
            |||||||||
Sbjct: 272 gagtcctata 263



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           |||||||||| ||||||||||||||| |||||||||||||
Sbjct: 302 tctcatattcgtcttctgagtcttcctctcgagtcctata 263



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattc 666
           ||||||| ||||||||||||||||||| | ||||| |||||
Sbjct: 402 tcttctagggtttcatattcgtcctctagagtcctatattc 362



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| |||||||| |||||||||||
Sbjct: 310 ctctgggctctcatattcgtcttctgagtcttc 278



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                       
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||||||||||||||||| |||  ||| | ||| || |||||| |||||| |||||
Sbjct: 299 catattcgtcttctgagtcttcctctcgagtcctatactcttcctctcgggtccgatatt 240



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctct 463
           |||| |||||||| || ||||||||||  |||| ||| | |||||||||||||
Sbjct: 470 ggctcccatattcttcctctgagtctttctctagagtcctatattcgtcctct 418



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           ||||||| || | ||||||||||||||||||||
Sbjct: 413 tcccatactcatcttctagggtttcatattcgt 381



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 596 tattcgtcttctaggattccatatt 620
           |||||||||||||||||| ||||||
Sbjct: 366 tattcgtcttctaggatttcatatt 342



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| || |||||||||| | || |||||||||||||
Sbjct: 464 catattcttcctctgagtctttctctagagtcctatattc 425



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 402 tcttctagggtttcatattcgtcctctagagtcctatatt 363



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 568 atattcgttttctagggtttcatattcg 595
           |||||||| ||||||| |||||||||||
Sbjct: 367 atattcgtcttctaggatttcatattcg 340
to top
>gb|U96321.1|SOU96321 Saccharum officinarum RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 505

 Score =  101 bits (51), Expect = 3e-18
 Identities = 81/91 (89%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||||| ||||| || |||||||||| || ||||||||||||||||
Sbjct: 335 cctctcgggtcctatatttgttctctaggctcccatattcttcctctgagtctttctcta 276

                                          
Query: 519 aagtcctatattcgttctctgggttcccata 549
            |||||||||||||| |||| || |||||||
Sbjct: 275 gagtcctatattcgtcctctaggatcccata 245



 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 57/63 (90%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           ||||| ||||||||||| |||||| | |||||||| ||||||||||| ||||||||||||
Sbjct: 498 aagatagaatcttcctccgggctcccatattcgtcttctgagtcttcctctgagtcttcc 439

              
Query: 374 tct 376
           |||
Sbjct: 438 tct 436



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                       
Query: 467 gtcctatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtccta 526
           |||||||||||| |||||||| || ||||||| ||||||||||||| ||||  |||||||
Sbjct: 162 gtcctatatttgttctctgggctctcatattcgtcttctgagtcttcctctcgagtccta 103

                
Query: 527 tattc 531
           |||||
Sbjct: 102 tattc 98



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 41/43 (95%)
 Strand = Plus / Minus

                                                      
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctatattc 721
           |||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 140 tctcatattcgtcttctgagtcttcctctcgagtcctatattc 98



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                      
Query: 347 tcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           |||||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 453 tcctctgagtcttcctctgagtcttcttctaaagtcccatatt 411



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattc 666
           ||||||| ||||||||||||||||||| | ||||| |||||
Sbjct: 240 tcttctagggtttcatattcgtcctctagagtcctatattc 200



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                     
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctata 474
           |||||||||||||||||||||| |||  ||| | |||||| |||||| | ||||||||
Sbjct: 137 catattcgtcttctgagtcttcctctcgagtcctatattcttcctctcgagtcctata 80



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| |||||||||||||||||||||||
Sbjct: 480 gggctcccatattcgtcttctgagtcttc 452



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 438 tctgagtcttcttctaaagtcccatattc 410



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| |||||||| |||||||||||
Sbjct: 148 ctctgggctctcatattcgtcttctgagtcttc 116



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 489 tcccatattcctcttctgagtctttctcta 518
           |||||||||| ||||||||||||| |||||
Sbjct: 386 tcccatattcttcttctgagtcttcctcta 357



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 356 tcttcttctgagtcttcctcta 377
           ||||||||||||||||||||||
Sbjct: 378 tcttcttctgagtcttcctcta 357



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 489 tcccatattcctcttctgagtctttctct 517
           |||||||||| ||||||||||||| ||||
Sbjct: 476 tcccatattcgtcttctgagtcttcctct 448



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctct 463
           |||| |||||||| || ||||||||||  |||| ||| | |||||||||||||
Sbjct: 308 ggctcccatattcttcctctgagtctttctctagagtcctatattcgtcctct 256



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           ||||||| || | ||||||||||||||||||||
Sbjct: 251 tcccatactcatcttctagggtttcatattcgt 219



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 596 tattcgtcttctaggattccatatt 620
           |||||||||||||||||| ||||||
Sbjct: 204 tattcgtcttctaggatttcatatt 180



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| || |||||||||| | || |||||||||||||
Sbjct: 302 catattcttcctctgagtctttctctagagtcctatattc 263



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 240 tcttctagggtttcatattcgtcctctagagtcctatatt 201



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 568 atattcgttttctagggtttcatattcg 595
           |||||||| ||||||| |||||||||||
Sbjct: 205 atattcgtcttctaggatttcatattcg 178
to top
>gb|U96316.1|TBU96316 Tragus berteronianus RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 457

 Score =  101 bits (51), Expect = 3e-18
 Identities = 93/107 (86%)
 Strand = Plus / Minus

                                                                       
Query: 445 agttccatattcgtcctcttgggtcctatatttgctctctgggttcccatattcctcttc 504
           ||||||||||| ||||||| | ||  |||||||| | ||||||||||| ||||| |||||
Sbjct: 328 agttccatattggtcctctcgagttttatatttgttttctgggttcccgtattcttcttc 269

                                                          
Query: 505 tgagtctttctctaaagtcctatattcgttctctgggttcccatatt 551
           |||||||||||||| |||||||||||||| |||| || |||| ||||
Sbjct: 268 tgagtctttctctagagtcctatattcgtcctctaggatcccgtatt 222



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 68/76 (89%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           ||||| ||||||||||||| |||| | |||||||||||||| ||||||||||||||||| 
Sbjct: 450 aagatagaatcttcctctgagctcccatattcgtcctctgaatcttcttctgagtcttct 391

                           
Query: 374 tctaaagtaccatatt 389
           |||||||  |||||||
Sbjct: 390 tctaaagccccatatt 375



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| ||||||||||||||||||||
Sbjct: 133 ctctgggctctcatattcgtcctctgagtcttc 101



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 75/90 (83%), Gaps = 1/90 (1%)
 Strand = Plus / Minus

                                                                       
Query: 629 tctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcatattc 688
           |||| ||||||||||||||| ||| | ||||| ||||| ||  |||  | ||||||||||
Sbjct: 174 tctagggtttcatattcgtcttctagagtcctatattc-gttctctgggctctcatattc 116

                                         
Query: 689 ctcttctgagtcttccgctcgagtcctata 718
            || |||||||||||| || ||||||||||
Sbjct: 115 gtcctctgagtcttcctctagagtcctata 86



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 425 tcttctgagtcttcttctaaagttccatattcgtcctct 463
           ||||||||||||||||||||||  |||||||||| ||||
Sbjct: 405 tcttctgagtcttcttctaaagccccatattcgttctct 367



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 568 atattcgttttctagggtttcatattcgt 596
           ||||||||| |||||||||||||||||||
Sbjct: 184 atattcgttctctagggtttcatattcgt 156



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 515 tctaaagtcctatattcgttctctgggttcccatatt 551
           |||| |||||||||||||||||||||| || ||||||
Sbjct: 153 tctagagtcctatattcgttctctgggctctcatatt 117



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 500 tcttctgagtctttctctaaagtcctatattcgttctctg 539
           |||||||||||||  ||||||| || ||||||||||||||
Sbjct: 405 tcttctgagtcttcttctaaagccccatattcgttctctg 366



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 59/70 (84%), Gaps = 1/70 (1%)
 Strand = Plus / Minus

                                                                       
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattccgtgttctanggtctcata 685
           ||||||| ||||||||||||||| ||| | ||||| |||| |||  |||| ||| |||||
Sbjct: 219 tcttctagggtttcatattcgtcttctagagtcctatatt-cgttctctagggtttcata 161

                     
Query: 686 ttcctcttct 695
           ||| ||||||
Sbjct: 160 ttcgtcttct 151



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                       
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||||| ||||||||||| |||| ||| | ||| || |||||| |||||| |||||
Sbjct: 122 catattcgtcctctgagtcttcctctagagtcctatactcttcctctcgggtccgatatt 63



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 684 tattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||| ||||||||||||| | || |||||||||||||
Sbjct: 279 tattcttcttctgagtctttctctagagtcctatattc 242



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 67/82 (81%)
 Strand = Plus / Minus

                                                                       
Query: 515 tctaaagtcctatattcgttctctgggttcccatatttgttttctgggctcccatattcg 574
           |||| ||||||||||||||||||| || |  |||||| || |||| |  ||| |||||||
Sbjct: 195 tctagagtcctatattcgttctctagggtttcatattcgtcttctagagtcctatattcg 136

                                 
Query: 575 ttttctagggtttcatattcgt 596
           || ||| || | ||||||||||
Sbjct: 135 ttctctgggctctcatattcgt 114



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                        
Query: 419 tattcgtcttctgagtcttcttctaaagttccatattcgtcctct 463
           ||||| |||||||||||||  |||| ||| | |||||||||||||
Sbjct: 279 tattcttcttctgagtctttctctagagtcctatattcgtcctct 235



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||| ||||| | ||||||||||||||||||||
Sbjct: 230 tcccgtattcatcttctagggtttcatattcgt 198
to top
>gb|AY174475.1| Chionachne koenigii DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 504

 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 82/93 (88%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||||| ||||| || |||||||||| || ||||| ||||||||||
Sbjct: 364 cctctcgggtcctatatttgttctctaggctcccatattcttcctctgaatctttctcta 305

                                            
Query: 519 aagtcctatattcgttctctgggttcccatatt 551
            |||||||||||||| |||| || |||||||||
Sbjct: 304 gagtcctatattcgtcctctaggatcccatatt 272



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 62/70 (88%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||||| |||||||| || ||||||| ||||||||||||| |||| 
Sbjct: 199 cctctcgggtcctatatttgttctctgggctctcatattcgtcttctgagtcttcctctc 140

                     
Query: 519 aagtcctata 528
            |||||||||
Sbjct: 139 gagtcctata 130



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           |||||||||| ||||||||||||||| |||||||||||||
Sbjct: 169 tctcatattcgtcttctgagtcttcctctcgagtcctata 130



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 50/57 (87%), Gaps = 3/57 (5%)
 Strand = Plus / Minus

                                                                    
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctct 652
           |||||||| |||||||| ||||||| |   ||||||| |||||||||||||||||||
Sbjct: 296 tattcgtcctctaggatcccatattca---tcttctagggtttcatattcgtcctct 243



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 280 tcccatattcatcttctagggtttcatattcgt 248



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| |||||||| |||||||||||
Sbjct: 177 ctctgggctctcatattcgtcttctgagtcttc 145



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                       
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||||||||||||||||| |||  ||| | ||| || |||||| |||||| |||||
Sbjct: 166 catattcgtcttctgagtcttcctctcgagtcctatactcttcctctcgggtccgatatt 107



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 489 tcccatattcctcttctgagtctttctcta 518
           |||||||||| ||||||||||||| |||||
Sbjct: 415 tcccatattcttcttctgagtcttcctcta 386



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 356 tcttcttctgagtcttcctcta 377
           ||||||||||||||||||||||
Sbjct: 407 tcttcttctgagtcttcctcta 386



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 26/29 (89%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||  ||||||||||||||| ||||||||
Sbjct: 467 tctrrgtcttcttctaaagtcccatattc 439



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 596 tattcgtcttctaggattccatatt 620
           |||||||||||||||||| ||||||
Sbjct: 233 tattcgtcttctaggatttcatatt 209



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 568 atattcgttttctagggtttcatattcg 595
           |||||||| ||||||| |||||||||||
Sbjct: 234 atattcgtcttctaggatttcatattcg 207
to top
>gb|U96320.1|HHU96320 Hyparrhenia hirta RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 543

 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 82/93 (88%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||| ||||||| ||||| || |||||||||| || ||||||||||||||||
Sbjct: 373 cctctcgggtcccatatttgttctctaggctcccatattcttcctctgagtctttctcta 314

                                            
Query: 519 aagtcctatattcgttctctgggttcccatatt 551
            |||||||||||||| |||| || |||||||||
Sbjct: 313 gagtcctatattcgtcctctaggatcccatatt 281



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 58/63 (92%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           ||||| ||||||||||| |||||| |||||||||| ||||||||||| ||||||||||||
Sbjct: 536 aagatagaatcttcctccgggctcccgtattcgtcttctgagtcttcctctgagtcttcc 477

              
Query: 374 tct 376
           |||
Sbjct: 476 tct 474



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 62/70 (88%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||||| |||||||| || ||||||| ||||||||||||| |||| 
Sbjct: 208 cctctcgggtcctatatttgttctctgggctctcatattcgtcttctgagtcttcctctc 149

                     
Query: 519 aagtcctata 528
            |||||||||
Sbjct: 148 gagtcctata 139



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           |||||||||| ||||||||||||||| |||||||||||||
Sbjct: 178 tctcatattcgtcttctgagtcttcctctcgagtcctata 139



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                      
Query: 347 tcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           |||||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 491 tcctctgagtcttcctctgagtcttcttctaaagtcccatatt 449



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 61/71 (85%), Gaps = 3/71 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |   ||||||| ||||||||||||||||||| | 
Sbjct: 305 tattcgtcctctaggatcccatattca---tcttctagggtttcatattcgtcctctaga 249

                      
Query: 656 gtcctgtattc 666
           ||||| |||||
Sbjct: 248 gtcctatattc 238



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 476 tctgagtcttcttctaaagtcccatattc 448



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 289 tcccatattcatcttctagggtttcatattcgt 257



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| |||||||| |||||||||||
Sbjct: 186 ctctgggctctcatattcgtcttctgagtcttc 154



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                       
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||||||||||||||||| |||  ||| | ||| || |||||| |||||| |||||
Sbjct: 175 catattcgtcttctgagtcttcctctcgagtcctatactcttcctctcgggtccgatatt 116



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 543 tcccatatttgttttctgggctcccatattc 573
           ||||||||||||| ||| |||||||||||||
Sbjct: 364 tcccatatttgttctctaggctcccatattc 334



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 489 tcccatattcctcttctgagtctttctcta 518
           |||||||||| ||||||||||||| |||||
Sbjct: 424 tcccatattcttcttctgagtcttcctcta 395



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 356 tcttcttctgagtcttcctcta 377
           ||||||||||||||||||||||
Sbjct: 416 tcttcttctgagtcttcctcta 395



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                       
Query: 411 ggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcc 470
           |||| |||||||| || ||||||||||  |||| ||| | ||||||||||||| || |||
Sbjct: 346 ggctcccatattcttcctctgagtctttctctagagtcctatattcgtcctctaggatcc 287

                 
Query: 471 tatatt 476
            |||||
Sbjct: 286 catatt 281



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| || ||||||||||||||||||||
Sbjct: 518 gggctcccgtattcgtcttctgagtcttc 490



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 596 tattcgtcttctaggattccatatt 620
           |||||||||||||||||| ||||||
Sbjct: 242 tattcgtcttctaggatttcatatt 218



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| || |||||||||| | || |||||||||||||
Sbjct: 340 catattcttcctctgagtctttctctagagtcctatattc 301



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 278 tcttctagggtttcatattcgtcctctagagtcctatatt 239



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 568 atattcgttttctagggtttcatattcg 595
           |||||||| ||||||| |||||||||||
Sbjct: 243 atattcgtcttctaggatttcatattcg 216
to top
>gb|AY174501.1| Urochloa plantaginea DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 551

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 69/76 (90%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           ||||||||||||||||| |||||| | |||||||| ||||||||||| ||||||||||| 
Sbjct: 545 aagatggaatcttcctccgggctcccatattcgtcttctgagtcttcctctgagtcttct 486

                           
Query: 374 tctaaagtaccatatt 389
           |||||||| |||||||
Sbjct: 485 tctaaagtcccatatt 470



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                            
Query: 503 tctgagtctttctctaaagtcctatattcgttctctgggttcccatatt 551
           |||||||||||||||| |||||||||||||| |||| || |||||||||
Sbjct: 317 tctgagtctttctctagagtcctatattcgtcctctaggatcccatatt 269



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                     
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||||||| ||||||||||||| ||||| |||||||||||
Sbjct: 445 tcccatattcttcttctgagtcttcctctagagtcctatatt 404



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                             
Query: 328 ctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctcta 377
           |||||||||| ||||||| |||||||||||||  |||||||||| |||||
Sbjct: 351 ctctgggctcccgtattcttcctctgagtctttctctgagtctttctcta 302



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 60/70 (85%), Gaps = 3/70 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |   ||||||| ||||||||||||||||||| | 
Sbjct: 293 tattcgtcctctaggatcccatattca---tcttctagggtttcatattcgtcctctaga 237

                     
Query: 656 gtcctgtatt 665
           ||||| ||||
Sbjct: 236 gtcctatatt 227



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| ||||||||||||||||||||
Sbjct: 174 ctctgggctctcatattcgtcctctgagtcttc 142



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           |||||||||| || |||||||||||| |||||||||||||
Sbjct: 166 tctcatattcgtcctctgagtcttcctctcgagtcctata 127



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 682 catattcctcttctgagtcttccgctcgagtcctatatt 720
           ||||||| ||||||||||||||| || ||||||||||||
Sbjct: 442 catattcttcttctgagtcttcctctagagtcctatatt 404



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                      
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctct 517
           ||||| ||||| |||||| | |||||||| |||| ||||| || |||||||||||||||
Sbjct: 373 cctctcgggtcttatattcgttctctgggctcccgtattcttcctctgagtctttctct 315



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| |||||||||||||||||||||||
Sbjct: 527 gggctcccatattcgtcttctgagtcttc 499



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 497 tctgagtcttcttctaaagtcccatattc 469



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 277 tcccatattcatcttctagggtttcatattcgt 245



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 356 tcttcttctgagtcttcctctaaagtaccatattt 390
           |||||||||||||||||||||| ||| | ||||||
Sbjct: 437 tcttcttctgagtcttcctctagagtcctatattt 403



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatttg 478
           |||||||  ||| |||||||||||||| | ||||||||||||
Sbjct: 266 tcttctagggtttcatattcgtcctctagagtcctatatttg 225



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 489 tcccatattcctcttctgagtctttctct 517
           |||||||||| ||||||||||||| ||||
Sbjct: 523 tcccatattcgtcttctgagtcttcctct 495



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 416 ccatattcgtcttctgagtcttcttcta 443
           |||||||| |||||||||||||| ||||
Sbjct: 443 ccatattcttcttctgagtcttcctcta 416
to top
>gb|AF372192.1| Panicum mystasipum DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 508

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 69/76 (90%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           ||||||||||||||||| |||||| | |||||||| ||||||||||| ||||||||||| 
Sbjct: 483 aagatggaatcttcctccgggctcccatattcgtcttctgagtcttcctctgagtcttct 424

                           
Query: 374 tctaaagtaccatatt 389
           |||||||| |||||||
Sbjct: 423 tctaaagtcccatatt 408



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 80/93 (86%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| ||||| |||||| | |||||||| | || ||||| || ||||||||||||||||
Sbjct: 311 cctctcgggtcttatattcgttctctgggctaccgtattcttcctctgagtctttctcta 252

                                            
Query: 519 aagtcctatattcgttctctgggttcccatatt 551
            |||||||||||||| |||| || |||||||||
Sbjct: 251 gagtcctatattcgtcctctaggatcccatatt 219



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 50/57 (87%), Gaps = 3/57 (5%)
 Strand = Plus / Minus

                                                                    
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctct 652
           |||||||| |||||||| ||||||| |   ||||||| |||||||||||||||||||
Sbjct: 243 tattcgtcctctaggatcccatattca---tcttctagggtttcatattcgtcctct 190



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           |||||||||| || |||||||||||| |||||||||||||
Sbjct: 116 tctcatattcgtcctctgagtcttcctctcgagtcctata 77



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||||||| ||||||||||||| ||||| || ||||||||
Sbjct: 383 tcccatattcttcttctgagtcttcctctagagccctatatt 342



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| |||||||||||||||||||||||
Sbjct: 465 gggctcccatattcgtcttctgagtcttc 437



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 435 tctgagtcttcttctaaagtcccatattc 407



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 227 tcccatattcatcttctagggtttcatattcgt 195



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           ||||| |||||| ||||||||||||||||||||
Sbjct: 124 ctctgtgctctcatattcgtcctctgagtcttc 92



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 682 catattcctcttctgagtcttccgctcgagtcctatatt 720
           ||||||| ||||||||||||||| || ||| ||||||||
Sbjct: 380 catattcttcttctgagtcttcctctagagccctatatt 342



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 356 tcttcttctgagtcttcctcta 377
           ||||||||||||||||||||||
Sbjct: 375 tcttcttctgagtcttcctcta 354



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 596 tattcgtcttctaggattccatattt 621
           |||||||||||||||||| |||||||
Sbjct: 180 tattcgtcttctaggatttcatattt 155



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 489 tcccatattcctcttctgagtctttctct 517
           |||||||||| ||||||||||||| ||||
Sbjct: 461 tcccatattcgtcttctgagtcttcctct 433



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 416 ccatattcgtcttctgagtcttcttcta 443
           |||||||| |||||||||||||| ||||
Sbjct: 381 ccatattcttcttctgagtcttcctcta 354



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||  ||||||| |||||||||||||
Sbjct: 289 ctctgggctaccgtattcttcctctgagtctt 258



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                       
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||||| ||||||||||| |||  ||| | ||| || |||||| |||||| |||||
Sbjct: 113 catattcgtcctctgagtcttcctctcgagtcctatactcttcctctcgggtccgatatt 54
to top
>gb|AF372162.1| Brachiaria mutica DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 550

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 69/76 (90%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           ||||||||||||||||| |||||| | |||||||| ||||||||||| ||||||||||| 
Sbjct: 533 aagatggaatcttcctccgggctcccatattcgtcttctgagtcttcctctgagtcttct 474

                           
Query: 374 tctaaagtaccatatt 389
           |||||||| |||||||
Sbjct: 473 tctaaagtcccatatt 458



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                     
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||||||| ||||||||||||| ||||| |||||||||||
Sbjct: 433 tcccatattcttcttctgagtcttcctctagagtcctatatt 392



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                          
Query: 505 tgagtctttctctaaagtcctatattcgttctctgggttcccatatt 551
           |||||||||||||| |||||||||||||  |||| || |||||||||
Sbjct: 303 tgagtctttctctagagtcctatattcgycctctaggatcccatatt 257



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| ||||||||||||||||||||
Sbjct: 162 ctctgggctctcatattcgtcctctgagtcttc 130



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           |||||||||| || |||||||||||| |||||||||||||
Sbjct: 154 tctcatattcgtcctctgagtcttcctctcgagtcctata 115



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 682 catattcctcttctgagtcttccgctcgagtcctatatt 720
           ||||||| ||||||||||||||| || ||||||||||||
Sbjct: 430 catattcttcttctgagtcttcctctagagtcctatatt 392



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| |||||||||||||||||||||||
Sbjct: 515 gggctcccatattcgtcttctgagtcttc 487



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 485 tctgagtcttcttctaaagtcccatattc 457



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 356 tcttcttctgagtcttcctctaaagtaccatattt 390
           |||||||||||||||||||||| ||| | ||||||
Sbjct: 425 tcttcttctgagtcttcctctagagtcctatattt 391



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                    
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttct 515
           ||||| ||||| |||||| | |||||||| | |||||||| || | |||||||||||
Sbjct: 361 cctctggggtcttatattcgttctctgggctaccatattcttcctmtgagtctttct 305



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 57/70 (81%), Gaps = 3/70 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||| | |||||||| ||||||| |   |||| || ||||||||||||| ||||| | 
Sbjct: 281 tattcgycctctaggatcccatattca---tcttmtagggtttcatattcgycctctaga 225

                     
Query: 656 gtcctgtatt 665
           ||||| ||||
Sbjct: 224 gtcctatatt 215



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 564 tcccatattcgttttctagggtttcatattcg 595
           |||||||||| | || ||||||||||||||||
Sbjct: 265 tcccatattcatcttmtagggtttcatattcg 234



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 489 tcccatattcctcttctgagtctttctct 517
           |||||||||| ||||||||||||| ||||
Sbjct: 511 tcccatattcgtcttctgagtcttcctct 483



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 416 ccatattcgtcttctgagtcttcttcta 443
           |||||||| |||||||||||||| ||||
Sbjct: 431 ccatattcttcttctgagtcttcctcta 404
to top
>gb|AF000019.1|BSAF000019 Brachiaria serrata RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 330

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 69/76 (90%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           ||||||||||||||||| |||||| | |||||||| ||||||||||| ||||||||||| 
Sbjct: 321 aagatggaatcttcctccgggctcccatattcgtcttctgagtcttcctctgagtcttct 262

                           
Query: 374 tctaaagtaccatatt 389
           |||||||| |||||||
Sbjct: 261 tctaaagtcccatatt 246



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                     
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||||||| ||||||||||||| ||||| |||||||||||
Sbjct: 221 tcccatattcttcttctgagtcttcctctagagtcctatatt 180



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           |||||||||| || |||||||||||| |||||||||||||
Sbjct: 119 tctcatattcttcctctgagtcttcctctcgagtcctata 80



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 682 catattcctcttctgagtcttccgctcgagtcctatatt 720
           ||||||| ||||||||||||||| || ||||||||||||
Sbjct: 218 catattcttcttctgagtcttcctctagagtcctatatt 180



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| |||||||||||||||||||||||
Sbjct: 303 gggctcccatattcgtcttctgagtcttc 275



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 273 tctgagtcttcttctaaagtcccatattc 245



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| ||||| ||||||||||||||
Sbjct: 127 ctctgggctctcatattcttcctctgagtcttc 95



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 356 tcttcttctgagtcttcctctaaagtaccatattt 390
           |||||||||||||||||||||| ||| | ||||||
Sbjct: 213 tcttcttctgagtcttcctctagagtcctatattt 179



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 489 tcccatattcctcttctgagtctttctct 517
           |||||||||| ||||||||||||| ||||
Sbjct: 299 tcccatattcgtcttctgagtcttcctct 271



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 416 ccatattcgtcttctgagtcttcttcta 443
           |||||||| |||||||||||||| ||||
Sbjct: 219 ccatattcttcttctgagtcttcctcta 192
to top
>gb|AF372163.1| Cenchrus echinatus DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 502

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 68/76 (89%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           || |||||||||||||| |||||| | |||||||| ||||||||||| ||||||||||| 
Sbjct: 500 aaratggaatcttcctcggggctcccatattcgtcttctgagtcttcctctgagtcttct 441

                           
Query: 374 tctaaagtaccatatt 389
           |||||||| |||||||
Sbjct: 440 tctaaagtcccatatt 425



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 79/93 (84%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| ||||| |||||| | |||||||| |||| ||||| || ||||||||||||||||
Sbjct: 328 cctctcgggtcttatattcgttctctgggctcccgtattcttcctctgagtctttctcta 269

                                            
Query: 519 aagtcctatattcgttctctgggttcccatatt 551
            || || |||||||| |||| || |||||||||
Sbjct: 268 gaggcccatattcgtcctctaggatcccatatt 236



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 62/71 (87%), Gaps = 1/71 (1%)
 Strand = Plus / Minus

                                                                       
Query: 648 cctctcgggtcctgtattccgtgttctanggtctcatattcctcttctgagtcttccgct 707
           ||||||||||||| ||||| || ||||  | |||||||||| || |||||||||||| ||
Sbjct: 163 cctctcgggtcctatattc-gttttctgggctctcatattcgtcctctgagtcttcctct 105

                      
Query: 708 cgagtcctata 718
           |||||||||||
Sbjct: 104 cgagtcctata 94



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                     
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||||||| ||||||||||||| ||||| |||||||||||
Sbjct: 400 tcccatattcttcttctgagtcttcctctagagtcctatatt 359



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 60/70 (85%), Gaps = 3/70 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |   ||||||| ||||||||||||||||||| | 
Sbjct: 260 tattcgtcctctaggatcccatattca---tcttctagggtttcatattcgtcctctaga 204

                     
Query: 656 gtcctgtatt 665
           ||||| ||||
Sbjct: 203 gtcctatatt 194



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                               
Query: 403 ttccccggggctgccatattcgtcttctgagtcttc 438
           |||| ||||||| |||||||||||||||||||||||
Sbjct: 489 ttcctcggggctcccatattcgtcttctgagtcttc 454



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                           
Query: 329 tctgggctctcgtattcgtcctctgagtcttc 360
           ||||||||||| ||||||||||||||||||||
Sbjct: 140 tctgggctctcatattcgtcctctgagtcttc 109



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 682 catattcctcttctgagtcttccgctcgagtcctatatt 720
           ||||||| ||||||||||||||| || ||||||||||||
Sbjct: 397 catattcttcttctgagtcttcctctagagtcctatatt 359



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||| | | |||||| || ||||||| || |||||||||| |||| 
Sbjct: 163 cctctcgggtcctatattcgttttctgggctctcatattcgtcctctgagtcttcctctc 104

                     
Query: 519 aagtcctata 528
            |||||||||
Sbjct: 103 gagtcctata 94



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 452 tctgagtcttcttctaaagtcccatattc 424



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 244 tcccatattcatcttctagggtttcatattcgt 212



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| ||||||| |||||||||||||
Sbjct: 306 ctctgggctcccgtattcttcctctgagtctt 275



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 356 tcttcttctgagtcttcctctaaagtaccatattt 390
           |||||||||||||||||||||| ||| | ||||||
Sbjct: 392 tcttcttctgagtcttcctctagagtcctatattt 358



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatttg 478
           |||||||  ||| |||||||||||||| | ||||||||||||
Sbjct: 233 tcttctagggtttcatattcgtcctctagagtcctatatttg 192



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 489 tcccatattcctcttctgagtctttctct 517
           |||||||||| ||||||||||||| ||||
Sbjct: 478 tcccatattcgtcttctgagtcttcctct 450



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 547 atatttgttttctgggctcccatattcgt 575
           ||||| ||||||||||||| |||||||||
Sbjct: 150 atattcgttttctgggctctcatattcgt 122



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 416 ccatattcgtcttctgagtcttcttcta 443
           |||||||| |||||||||||||| ||||
Sbjct: 398 ccatattcttcttctgagtcttcctcta 371



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                       
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||||| ||||||||||| |||  ||| | ||| || |||||| |||||| |||||
Sbjct: 130 catattcgtcctctgagtcttcctctcgagtcctatactcttcctctcgggtccgatatt 71
to top
>gb|AY174488.1| Panicum miliaceum DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 529

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 68/76 (89%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           ||||||||||||||||| |||||| | |||||||| | ||||||||| ||||||||||| 
Sbjct: 497 aagatggaatcttcctccgggctcccatattcgtcttntgagtcttcctctgagtcttct 438

                           
Query: 374 tctaaagtaccatatt 389
           |||||||| |||||||
Sbjct: 437 tctaaagtcccatatt 422



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 63/72 (87%)
 Strand = Plus / Minus

                                                                       
Query: 480 tctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttctctg 539
           |||||||| | || ||||| || |||||||||||||||| |||||||||||||| |||| 
Sbjct: 304 tctctgggctaccgtattcttcctctgagtctttctctagagtcctatattcgtcctcta 245

                       
Query: 540 ggttcccatatt 551
           || |||||||||
Sbjct: 244 ggatcccatatt 233



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 61/71 (85%), Gaps = 3/71 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |   ||||||| ||||||||||||||||||| | 
Sbjct: 257 tattcgtcctctaggatcccatattca---tcttctagggtttcatattcgtcctctaga 201

                      
Query: 656 gtcctgtattc 666
           ||||| |||||
Sbjct: 200 gtcctatattc 190



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           |||||||||| || |||||||||||| |||||||||||||
Sbjct: 130 tctcatattcgtcctctgagtcttcctctcgagtcctata 91



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||||||| ||||||||||||| ||||| || ||||||||
Sbjct: 397 tcccatattcttcttctgagtcttcctctagagccctatatt 356



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 449 tctgagtcttcttctaaagtcccatattc 421



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 241 tcccatattcatcttctagggtttcatattcgt 209



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           ||||| |||||| ||||||||||||||||||||
Sbjct: 138 ctctgtgctctcatattcgtcctctgagtcttc 106



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 682 catattcctcttctgagtcttccgctcgagtcctatatt 720
           ||||||| ||||||||||||||| || ||| ||||||||
Sbjct: 394 catattcttcttctgagtcttcctctagagccctatatt 356



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| ||||||||||||| |||||||||
Sbjct: 479 gggctcccatattcgtcttntgagtcttc 451



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 356 tcttcttctgagtcttcctcta 377
           ||||||||||||||||||||||
Sbjct: 389 tcttcttctgagtcttcctcta 368



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 596 tattcgtcttctaggattccatatt 620
           |||||||||||||||||| ||||||
Sbjct: 194 tattcgtcttctaggatttcatatt 170



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 416 ccatattcgtcttctgagtcttcttcta 443
           |||||||| |||||||||||||| ||||
Sbjct: 395 ccatattcttcttctgagtcttcctcta 368



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||  ||||||| |||||||||||||
Sbjct: 303 ctctgggctaccgtattcttcctctgagtctt 272



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 230 tcttctagggtttcatattcgtcctctagagtcctatatt 191



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 568 atattcgttttctagggtttcatattcg 595
           |||||||| ||||||| |||||||||||
Sbjct: 195 atattcgtcttctaggatttcatattcg 168
to top
>gb|AY174484.1| Lasiacis sorghoidea DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 501

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 81/93 (87%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| ||||| |||||| | |||||||| |||| ||||| || ||||||||||||||||
Sbjct: 340 cctctcgggtcttatattcgttctctgggctcccgtattcttcctctgagtctttctcta 281

                                            
Query: 519 aagtcctatattcgttctctgggttcccatatt 551
            |||||||||||||| |||| || |||||||||
Sbjct: 280 gagtcctatattcgtcctctaggatcccatatt 248



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                            
Query: 341 tattcgtcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           |||||||| ||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 485 tattcgtcttctgagtcttcctctgagtcttcttctaaagtcccatatt 437



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 61/71 (85%), Gaps = 3/71 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |   ||||||| ||||||||||||||||||| | 
Sbjct: 272 tattcgtcctctaggatcccatattca---tcttctagggtttcatattcgtcctctaga 216

                      
Query: 656 gtcctgtattc 666
           ||||| |||||
Sbjct: 215 gtcctatattc 205



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                        
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgt 533
           ||||||| || ||||||||||||| ||||| ||||||||||||||
Sbjct: 412 tcccataatcttcttctgagtcttcctctagagtcctatattcgt 368



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| ||||||||||||||||||||
Sbjct: 153 ctctgggctctcatattcgtcctctgagtcttc 121



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                       
Query: 465 gggtcctatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcc 524
           |||||||||||| | |||||||| || ||||||| || |||||||||| ||||  |||||
Sbjct: 169 gggtcctatattcgttctctgggctctcatattcgtcctctgagtcttcctctcgagtcc 110

               
Query: 525 tata 528
           ||||
Sbjct: 109 tata 106



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           |||||||||| || |||||||||||| |||||||||||||
Sbjct: 145 tctcatattcgtcctctgagtcttcctctcgagtcctata 106



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 464 tctgagtcttcttctaaagtcccatattc 436



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 256 tcccatattcatcttctagggtttcatattcgt 224



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 690 tcttctgagtcttccgctcgagtcctatattc 721
           ||||||||||||||| || |||||||||||||
Sbjct: 401 tcttctgagtcttcctctagagtcctatattc 370



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| ||||||| |||||||||||||
Sbjct: 318 ctctgggctcccgtattcttcctctgagtctt 287



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 416 ccatattcgtcttctgagtcttc 438
           |||||||||||||||||||||||
Sbjct: 488 ccatattcgtcttctgagtcttc 466



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 521 gtcctatattcgttctctgggttcccatatt 551
           ||||||||||||||||||||| || ||||||
Sbjct: 167 gtcctatattcgttctctgggctctcatatt 137



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                      
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           |||||||||| ||||||||||| |||  ||| | ||| || |||||| |||||||||||
Sbjct: 142 catattcgtcctctgagtcttcctctcgagtcctatactcttcctctcgggtcctatat 84



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 356 tcttcttctgagtcttcctcta 377
           ||||||||||||||||||||||
Sbjct: 404 tcttcttctgagtcttcctcta 383



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 489 tcccatattcctcttctgagtctttctct 517
           |||||||||| ||||||||||||| ||||
Sbjct: 490 tcccatattcgtcttctgagtcttcctct 462



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 596 tattcgtcttctaggattccatatt 620
           |||||||||||||||||| ||||||
Sbjct: 374 tattcgtcttctaggatttcatatt 350



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 416 ccatattcgtcttctgagtcttcttctaaagttccatattcgtc 459
           ||||| || |||||||||||||| |||| ||| | |||||||||
Sbjct: 410 ccataatcttcttctgagtcttcctctagagtcctatattcgtc 367



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 568 atattcgttttctagggtttcatattcg 595
           |||||||| ||||||| |||||||||||
Sbjct: 375 atattcgtcttctaggatttcatattcg 348



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 245 tcttctagggtttcatattcgtcctctagagtcctatatt 206
to top
>gb|AF372212.1| Urochloa acuminata DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 543

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 81/93 (87%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| ||||| |||||| | |||||||| |||| ||||| || ||||||||||||||||
Sbjct: 379 cctctcgggtcttatattcgttctctgggctcccgtattcttcctctgagtctttctcta 320

                                            
Query: 519 aagtcctatattcgttctctgggttcccatatt 551
            |||||||||||||| |||| || |||||||||
Sbjct: 319 gagtcctatattcgtcctctaggatcccatatt 287



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 61/68 (89%)
 Strand = Plus / Minus

                                                                       
Query: 322 atcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagt 381
           ||||||||| |||||| | |||||||| ||||||||||| ||||||||||| ||||||||
Sbjct: 543 atcttcctccgggctcccatattcgtcttctgagtcttcctctgagtcttcttctaaagt 484

                   
Query: 382 accatatt 389
            |||||||
Sbjct: 483 cccatatt 476



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                     
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||||||| ||||||||||||| ||||| |||||||||||
Sbjct: 451 tcccatattcttcttctgagtcttcctctagagtcctatatt 410



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 60/70 (85%), Gaps = 3/70 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |   ||||||| ||||||||||||||||||| | 
Sbjct: 311 tattcgtcctctaggatcccatattca---tcttctagggtttcatattcgtcctctaga 255

                     
Query: 656 gtcctgtatt 665
           ||||| ||||
Sbjct: 254 gtcctatatt 245



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| ||||||||||||||||||||
Sbjct: 192 ctctgggctctcatattcgtcctctgagtcttc 160



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           |||||||||| || |||||||||||| |||||||||||||
Sbjct: 184 tctcatattcgtcctctgagtcttcctctcgagtcctata 145



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 682 catattcctcttctgagtcttccgctcgagtcctatatt 720
           ||||||| ||||||||||||||| || ||||||||||||
Sbjct: 448 catattcttcttctgagtcttcctctagagtcctatatt 410



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| |||||||||||||||||||||||
Sbjct: 533 gggctcccatattcgtcttctgagtcttc 505



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 503 tctgagtcttcttctaaagtcccatattc 475



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 295 tcccatattcatcttctagggtttcatattcgt 263



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| ||||||| |||||||||||||
Sbjct: 357 ctctgggctcccgtattcttcctctgagtctt 326



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 356 tcttcttctgagtcttcctctaaagtaccatattt 390
           |||||||||||||||||||||| ||| | ||||||
Sbjct: 443 tcttcttctgagtcttcctctagagtcctatattt 409



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatttg 478
           |||||||  ||| |||||||||||||| | ||||||||||||
Sbjct: 284 tcttctagggtttcatattcgtcctctagagtcctatatttg 243



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 489 tcccatattcctcttctgagtctttctct 517
           |||||||||| ||||||||||||| ||||
Sbjct: 529 tcccatattcgtcttctgagtcttcctct 501
to top
>gb|AF000020.1|RRAF000020 Rhynchelytrum repens subsp. repens RNA polymerase beta-subunit
           (rpoC2) gene, chloroplast gene encoding chloroplast
           protein, partial cds
          Length = 463

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 81/93 (87%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| ||||| |||||| | |||||||| |||| ||||| || ||||||||||||||||
Sbjct: 335 cctctcgggtcttatattcgttctctgggctcccgtattcttcctctgagtctttctcta 276

                                            
Query: 519 aagtcctatattcgttctctgggttcccatatt 551
            |||||||||||||| |||| || |||||||||
Sbjct: 275 gagtcctatattcgtcctctaggatcccatatt 243



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                       
Query: 325 ttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtacc 384
           |||||| |||||| | |||||||| ||||||||||| ||||||||||| |||||||| ||
Sbjct: 463 ttcctccgggctcccatattcgtcttctgagtcttcctctgagtcttcttctaaagtccc 404

                
Query: 385 atatt 389
           |||||
Sbjct: 403 atatt 399



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 36/37 (97%)
 Strand = Plus / Minus

                                                
Query: 328 ctctgggctctcgtattcgtcctctgagtcttcttct 364
           |||||||||||| ||||||||||||||||||||||||
Sbjct: 148 ctctgggctctcatattcgtcctctgagtcttcttct 112



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                     
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||||||| ||||||||||||| ||||| |||||||||||
Sbjct: 407 tcccatattcttcttctgagtcttcctctagagtcctatatt 366



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 682 catattcctcttctgagtcttccgctcgagtcctatatt 720
           ||||||| ||||||||||||||| || ||||||||||||
Sbjct: 404 catattcttcttctgagtcttcctctagagtcctatatt 366



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| |||||||||||||||||||||||
Sbjct: 456 gggctcccatattcgtcttctgagtcttc 428



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 426 tctgagtcttcttctaaagtcccatattc 398



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| ||||||| |||||||||||||
Sbjct: 313 ctctgggctcccgtattcttcctctgagtctt 282



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 49/57 (85%), Gaps = 3/57 (5%)
 Strand = Plus / Minus

                                                                    
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctct 652
           |||||||| |||||||| ||||||| |   ||||||| |||||| ||||||||||||
Sbjct: 267 tattcgtcctctaggatcccatattca---tcttctagggtttcgtattcgtcctct 214



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           |||||||||| || |||||||||||  |||||||||||||
Sbjct: 140 tctcatattcgtcctctgagtcttcttctcgagtcctata 101



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 356 tcttcttctgagtcttcctctaaagtaccatattt 390
           |||||||||||||||||||||| ||| | ||||||
Sbjct: 399 tcttcttctgagtcttcctctagagtcctatattt 365



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 417 catattcgtcttctgagtcttcttct 442
           |||||||||| |||||||||||||||
Sbjct: 137 catattcgtcctctgagtcttcttct 112



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 489 tcccatattcctcttctgagtctttctct 517
           |||||||||| ||||||||||||| ||||
Sbjct: 452 tcccatattcgtcttctgagtcttcctct 424



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | |||||||||||| |||||||
Sbjct: 251 tcccatattcatcttctagggtttcgtattcgt 219



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 523 cctatattcgttctctgggttcccatatt 551
           ||||||||||||||||||| || ||||||
Sbjct: 160 cctatattcgttctctgggctctcatatt 132



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 416 ccatattcgtcttctgagtcttcttcta 443
           |||||||| |||||||||||||| ||||
Sbjct: 405 ccatattcttcttctgagtcttcctcta 378
to top
>gb|AF372170.1| Digitaria ciliaris DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 511

 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 68/76 (89%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           ||||||||||||||||| |||||| | |||||||| ||||||||||| ||||||||||| 
Sbjct: 494 aagatggaatcttcctccgggctcccatattcgtcttctgagtcttcctctgagtcttct 435

                           
Query: 374 tctaaagtaccatatt 389
           || ||||| |||||||
Sbjct: 434 tcgaaagtcccatatt 419



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                        
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgt 533
           |||||||||| ||||||||||||| ||||| ||||||||||||||
Sbjct: 394 tcccatattcttcttctgagtcttcctctagagtcctatattcgt 350



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 73/87 (83%)
 Strand = Plus / Minus

                                                                       
Query: 465 gggtcctatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcc 524
           ||||| |||||| | |||||||| |||| ||||| || ||||||| ||| |||| |||||
Sbjct: 316 gggtcttatattcgttctctgggctcccgtattcgtcctctgagtttttttctagagtcc 257

                                      
Query: 525 tatattcgttctctgggttcccatatt 551
           ||||||||| |||| |  |||||||||
Sbjct: 256 tatattcgtcctctagaatcccatatt 230



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||| | |||||||| || ||||||| || |||||||||| |||| 
Sbjct: 157 cctctcgggtcctatattcgttctctgggctctcatattcgtcctctgagtcttcctctc 98

                     
Query: 519 aagtcctata 528
            |||||||||
Sbjct: 97  gagtcctata 88



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| ||||||||||||||||||||
Sbjct: 135 ctctgggctctcatattcgtcctctgagtcttc 103



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| ||||||||||||||| || |||||||||||||
Sbjct: 391 catattcttcttctgagtcttcctctagagtcctatattc 352



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 61/71 (85%), Gaps = 1/71 (1%)
 Strand = Plus / Minus

                                                                       
Query: 648 cctctcgggtcctgtattccgtgttctanggtctcatattcctcttctgagtcttccgct 707
           ||||||||||||| |||| |||  |||  | |||||||||| || |||||||||||| ||
Sbjct: 157 cctctcgggtcctatatt-cgttctctgggctctcatattcgtcctctgagtcttcctct 99

                      
Query: 708 cgagtcctata 718
           |||||||||||
Sbjct: 98  cgagtcctata 88



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 626 tcttctanggtttcatattcgtcctctcgggtcctgtattc 666
           ||||||| ||||||||||||||||||| | ||||| |||||
Sbjct: 227 tcttctagggtttcatattcgtcctctagagtcctatattc 187



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| |||||||||||||||||||||||
Sbjct: 476 gggctcccatattcgtcttctgagtcttc 448



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 328 ctctgggctctcgtattcgtcctctgagt 356
           |||||||||| ||||||||||||||||||
Sbjct: 300 ctctgggctcccgtattcgtcctctgagt 272



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 238 tcccatattcatcttctagggtttcatattcgt 206



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 416 ccatattcgtcttctgagtcttcttctaaagttccatattcgtc 459
           |||||||| |||||||||||||| |||| ||| | |||||||||
Sbjct: 392 ccatattcttcttctgagtcttcctctagagtcctatattcgtc 349



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 521 gtcctatattcgttctctgggttcccatatt 551
           ||||||||||||||||||||| || ||||||
Sbjct: 149 gtcctatattcgttctctgggctctcatatt 119



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 356 tcttcttctgagtcttcctcta 377
           ||||||||||||||||||||||
Sbjct: 386 tcttcttctgagtcttcctcta 365



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                 
Query: 410 gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctct 463
           ||||| || |||||||| ||||||| || ||||| ||| | |||||||||||||
Sbjct: 296 gggctcccgtattcgtcctctgagtttttttctagagtcctatattcgtcctct 243



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 489 tcccatattcctcttctgagtctttctct 517
           |||||||||| ||||||||||||| ||||
Sbjct: 472 tcccatattcgtcttctgagtcttcctct 444



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||| ||||| ||||||||
Sbjct: 446 tctgagtcttcttcgaaagtcccatattc 418



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 596 tattcgtcttctaggattccatatt 620
           |||||||||||||||||| ||||||
Sbjct: 356 tattcgtcttctaggatttcatatt 332



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 596 tattcgtcttctaggattccatatt 620
           |||||||||||||||||| ||||||
Sbjct: 191 tattcgtcttctaggatttcatatt 167



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 568 atattcgttttctagggtttcatattcg 595
           |||||||| ||||||| |||||||||||
Sbjct: 357 atattcgtcttctaggatttcatattcg 330



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 227 tcttctagggtttcatattcgtcctctagagtcctatatt 188



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 568 atattcgttttctagggtttcatattcg 595
           |||||||| ||||||| |||||||||||
Sbjct: 192 atattcgtcttctaggatttcatattcg 165
to top
>gb|AF372164.1| Cenchrus ciliaris DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 469

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 66/76 (86%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           ||||||||||||||||| |||||| | |||||||| | ||||||||| | ||||||||| 
Sbjct: 449 aagatggaatcttcctcggggctcccatattcgtcttytgagtcttcctmtgagtcttct 390

                           
Query: 374 tctaaagtaccatatt 389
           | |||||| |||||||
Sbjct: 389 tmtaaagtcccatatt 374



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 78/93 (83%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||| | |||||||| |||| ||||| || | ||||||||||||||
Sbjct: 277 cctctcgggtcctatattcgttctctgggctcccgtattcttcctytgagtctttctcta 218

                                            
Query: 519 aagtcctatattcgttctctgggttcccatatt 551
            || || |||||||| || | || |||||||||
Sbjct: 217 gaggcccatattcgtcctstaggatcccatatt 185



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 403 ttccccggggctgccatattcgtcttctgagtcttc 438
           |||| ||||||| ||||||||||||| |||||||||
Sbjct: 438 ttcctcggggctcccatattcgtcttytgagtcttc 403



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||||||| |||| |||||||| ||| | |||||||||||
Sbjct: 349 tcccatattcttcttstgagtcttcctcwatagtcctatatt 308



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 331 tgggctctcgtattcgtcctctgagtcttc 360
           ||||||||| ||||||||||| ||||||||
Sbjct: 87  tgggctctcatattcgtcctcwgagtcttc 58



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           |||||||||| || || |||||||||  ||||||||||||
Sbjct: 82  tctcatattcgtcctcwgagtcttcctmtcgagtcctata 43



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| ||||||| |||| ||||||||
Sbjct: 255 ctctgggctcccgtattcttcctytgagtctt 224



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                      
Query: 430 tgagtcttcttctaaagttccatattc 456
           ||||||||||| |||||| ||||||||
Sbjct: 399 tgagtcttcttmtaaagtcccatattc 373



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 29/33 (87%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||| | ||||||
Sbjct: 193 tcccatattcatmttctagggtttmawattcgt 161



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 56/70 (80%), Gaps = 3/70 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| | |||||| ||||||| |   | ||||| ||||| | ||||||||||| | 
Sbjct: 209 tattcgtcctstaggatcccatattca---tmttctagggtttmawattcgtcctctaga 153

                     
Query: 656 gtcctgtatt 665
           ||||| ||||
Sbjct: 152 gtcctatatt 143
to top
>gb|AY174486.1| Panicum aquaticum DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 467

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 80/93 (86%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| ||||| |||||| | |||||||| | || ||||| || ||||||||||||||||
Sbjct: 312 cctctcgggtcttatattcgttctctgggctaccgtattcttcctctgagtctttctcta 253

                                            
Query: 519 aagtcctatattcgttctctgggttcccatatt 551
            |||||||||||||| |||| || |||||||||
Sbjct: 252 gagtcctatattcgtcctctaggatcccatatt 220



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                     
Query: 332 gggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           |||||| | |||||||| ||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 466 gggctcccatattcgtcttctgagtcttcctctgagtcttcttctaaagtcccatatt 409



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 61/71 (85%), Gaps = 3/71 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |   ||||||| ||||||||||||||||||| | 
Sbjct: 244 tattcgtcctctaggatcccatattca---tcttctagggtttcatattcgtcctctaga 188

                      
Query: 656 gtcctgtattc 666
           ||||| |||||
Sbjct: 187 gtcctatattc 177



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           |||||||||| || |||||||||||| |||||||||||||
Sbjct: 117 tctcatattcgtcctctgagtcttcctctcgagtcctata 78



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||||||| ||||||||||||| ||||| || ||||||||
Sbjct: 384 tcccatattcttcttctgagtcttcctctagagccctatatt 343



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| |||||||||||||||||||||||
Sbjct: 466 gggctcccatattcgtcttctgagtcttc 438



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 436 tctgagtcttcttctaaagtcccatattc 408



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 228 tcccatattcatcttctagggtttcatattcgt 196



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           ||||| |||||| ||||||||||||||||||||
Sbjct: 125 ctctgtgctctcatattcgtcctctgagtcttc 93



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 682 catattcctcttctgagtcttccgctcgagtcctatatt 720
           ||||||| ||||||||||||||| || ||| ||||||||
Sbjct: 381 catattcttcttctgagtcttcctctagagccctatatt 343



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 356 tcttcttctgagtcttcctcta 377
           ||||||||||||||||||||||
Sbjct: 376 tcttcttctgagtcttcctcta 355



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 596 tattcgtcttctaggattccatattt 621
           |||||||||||||||||| |||||||
Sbjct: 181 tattcgtcttctaggatttcatattt 156



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 489 tcccatattcctcttctgagtctttctct 517
           |||||||||| ||||||||||||| ||||
Sbjct: 462 tcccatattcgtcttctgagtcttcctct 434



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 416 ccatattcgtcttctgagtcttcttcta 443
           |||||||| |||||||||||||| ||||
Sbjct: 382 ccatattcttcttctgagtcttcctcta 355



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||  ||||||| |||||||||||||
Sbjct: 290 ctctgggctaccgtattcttcctctgagtctt 259



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 217 tcttctagggtttcatattcgtcctctagagtcctatatt 178



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                       
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||||| ||||||||||| |||  ||| | ||| || |||||| |||||| |||||
Sbjct: 114 catattcgtcctctgagtcttcctctcgagtcctatactcttcctctcgggtccgatatt 55
to top
>gb|AF372202.1| Pseudechinolaena polystachya DNA-directed RNA polymerase beta'
           subunit 2 (rpoC2) gene, partial cds; chloroplast gene
           for chloroplast product
          Length = 532

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 80/93 (86%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| ||||| |||||| | ||| |||| |||| ||||| || ||||||||||||||||
Sbjct: 340 cctctcgggtcttatattcgttctttgggctcccgtattcttcctctgagtctttctcta 281

                                            
Query: 519 aagtcctatattcgttctctgggttcccatatt 551
            |||||||||||||| |||| || |||||||||
Sbjct: 280 gagtcctatattcgtcctctaggatcccatatt 248



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 67/76 (88%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           |||||||||||||||||  ||||| | |||||||  ||||||||||| ||||||||||| 
Sbjct: 512 aagatggaatcttcctccaggctcccatattcgttttctgagtcttcctctgagtcttct 453

                           
Query: 374 tctaaagtaccatatt 389
           |||||||| |||||||
Sbjct: 452 tctaaagtcccatatt 437



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 61/71 (85%), Gaps = 3/71 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |   ||||||| ||||||||||||||||||| | 
Sbjct: 272 tattcgtcctctaggatcccatattca---tcttctagggtttcatattcgtcctctaga 216

                      
Query: 656 gtcctgtattc 666
           ||||| |||||
Sbjct: 215 gtcctatattc 205



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                        
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgt 533
           ||||||| || ||||||||||||| ||||| ||||||||||||||
Sbjct: 412 tcccataatcttcttctgagtcttcctctagagtcctatattcgt 368



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| ||||||||||||||||||||
Sbjct: 153 ctctgggctctcatattcgtcctctgagtcttc 121



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                       
Query: 465 gggtcctatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcc 524
           |||||||||||| | |||||||| || ||||||| || |||||||||| ||||  |||||
Sbjct: 169 gggtcctatattcgttctctgggctctcatattcgtcctctgagtcttcctctcgagtcc 110

               
Query: 525 tata 528
           ||||
Sbjct: 109 tata 106



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           |||||||||| || |||||||||||| |||||||||||||
Sbjct: 145 tctcatattcgtcctctgagtcttcctctcgagtcctata 106



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 464 tctgagtcttcttctaaagtcccatattc 436



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 256 tcccatattcatcttctagggtttcatattcgt 224



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 690 tcttctgagtcttccgctcgagtcctatattc 721
           ||||||||||||||| || |||||||||||||
Sbjct: 401 tcttctgagtcttcctctagagtcctatattc 370



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 521 gtcctatattcgttctctgggttcccatatt 551
           ||||||||||||||||||||| || ||||||
Sbjct: 167 gtcctatattcgttctctgggctctcatatt 137



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                      
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatat 475
           |||||||||| ||||||||||| |||  ||| | ||| || |||||| |||||||||||
Sbjct: 142 catattcgtcctctgagtcttcctctcgagtcctatactcttcctctcgggtcctatat 84



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 356 tcttcttctgagtcttcctcta 377
           ||||||||||||||||||||||
Sbjct: 404 tcttcttctgagtcttcctcta 383



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 331 tgggctctcgtattcgtcctctgagtctt 359
           ||||||| ||||||| |||||||||||||
Sbjct: 315 tgggctcccgtattcttcctctgagtctt 287



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 561 ggctcccatattcgttttct 580
           ||||||||||||||||||||
Sbjct: 493 ggctcccatattcgttttct 474



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 411 ggctgccatattcgtcttctgagtcttc 438
           |||| |||||||||| ||||||||||||
Sbjct: 493 ggctcccatattcgttttctgagtcttc 466



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 416 ccatattcgtcttctgagtcttcttctaaagttccatattcgtc 459
           ||||| || |||||||||||||| |||| ||| | |||||||||
Sbjct: 410 ccataatcttcttctgagtcttcctctagagtcctatattcgtc 367



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 245 tcttctagggtttcatattcgtcctctagagtcctatatt 206
to top
>gb|AF372194.1| Panicum pedersenii DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 429

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 80/93 (86%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| ||||| |||||| | |||||||| | || ||||| || ||||||||||||||||
Sbjct: 292 cctctcgggtcttatattcgttctctgggctaccgtattcttcctctgagtctttctcta 233

                                            
Query: 519 aagtcctatattcgttctctgggttcccatatt 551
            |||||||||||||| |||| || |||||||||
Sbjct: 232 gagtcctatattcgtcctctaggatcccatatt 200



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 350 tctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           ||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 428 tctgagtcttcctctgagtcttcttctaaagtcccatatt 389



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           |||||||||| || |||||||||||| |||||||||||||
Sbjct: 139 tctcatattcgtcctctgagtcttcctctcgagtcctata 100



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 416 tctgagtcttcttctaaagtcccatattc 388



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 50/58 (86%), Gaps = 3/58 (5%)
 Strand = Plus / Minus

                                                                     
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctc 653
           |||||||| |||||||| ||||||| |   ||||||| ||||||||||||| ||||||
Sbjct: 224 tattcgtcctctaggatcccatattca---tcttctagggtttcatattcgccctctc 170



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           ||||| |||||| ||||||||||||||||||||
Sbjct: 147 ctctgtgctctcatattcgtcctctgagtcttc 115



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 564 tcccatattcgttttctagggtttcatattcg 595
           |||||||||| | |||||||||||||||||||
Sbjct: 208 tcccatattcatcttctagggtttcatattcg 177



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 356 tcttcttctgagtcttcctctaaagtaccatattt 390
           |||||||||||||||||||||| ||  ||||||||
Sbjct: 356 tcttcttctgagtcttcctctagagccccatattt 322



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||  ||||||| |||||||||||||
Sbjct: 270 ctctgggctaccgtattcttcctctgagtctt 239



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                       
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||||| ||||||||||| |||  ||| | ||| || |||||| |||||| |||||
Sbjct: 136 catattcgtcctctgagtcttcctctcgagtcctatactcttcctctcgggtccgatatt 77
to top
>gb|L25383.1|PENCPRPOC2 Pennisetum sp. chloroplast RNA polymerase beta-subunit (rpoC2)
           gene, partial cds
          Length = 534

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 67/76 (88%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           ||||||||||||||||| ||||||   |||||||| ||||||||||| ||||||||||| 
Sbjct: 517 aagatggaatcttcctcggggctccaatattcgtcttctgagtcttcctctgagtcttct 458

                           
Query: 374 tctaaagtaccatatt 389
           |||||| | |||||||
Sbjct: 457 tctaaaatcccatatt 442



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 79/93 (84%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| ||||| |||||| | |||||||| |||| ||||| || ||||||||||||||||
Sbjct: 345 cctctcgggtcttatattcgttctctgggctcccgtattcttcctctgagtctttctcta 286

                                            
Query: 519 aagtcctatattcgttctctgggttcccatatt 551
            || || |||||||| |||| || |||||||||
Sbjct: 285 gaggcccatattcgtcctctaggatcccatatt 253



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                       
Query: 487 gttcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||||||||| ||||||||||||| ||||| |||||||||||
Sbjct: 419 gttcccatattcttcttctgagtcttcctctagagtcctatatt 376



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 60/70 (85%), Gaps = 3/70 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |   ||||||| ||||||||||||||||||| | 
Sbjct: 277 tattcgtcctctaggatcccatattca---tcttctagggtttcatattcgtcctctaga 221

                     
Query: 656 gtcctgtatt 665
           ||||| ||||
Sbjct: 220 gtcctatatt 211



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                           
Query: 329 tctgggctctcgtattcgtcctctgagtcttc 360
           ||||||||||| ||||||||||||||||||||
Sbjct: 157 tctgggctctcatattcgtcctctgagtcttc 126



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           |||||||||| || |||||||||||| |||||||||||||
Sbjct: 150 tctcatattcgtcctctgagtcttcctctcgagtcctata 111



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 682 catattcctcttctgagtcttccgctcgagtcctatatt 720
           ||||||| ||||||||||||||| || ||||||||||||
Sbjct: 414 catattcttcttctgagtcttcctctagagtcctatatt 376



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 261 tcccatattcatcttctagggtttcatattcgt 229



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 403 ttccccggggctgccatattcgtcttctgagtcttc 438
           |||| ||||||| | |||||||||||||||||||||
Sbjct: 506 ttcctcggggctccaatattcgtcttctgagtcttc 471



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| ||||||| |||||||||||||
Sbjct: 323 ctctgggctcccgtattcttcctctgagtctt 292



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 356 tcttcttctgagtcttcctctaaagtaccatattt 390
           |||||||||||||||||||||| ||| | ||||||
Sbjct: 409 tcttcttctgagtcttcctctagagtcctatattt 375



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatttg 478
           |||||||  ||| |||||||||||||| | ||||||||||||
Sbjct: 250 tcttctagggtttcatattcgtcctctagagtcctatatttg 209



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||| | ||||||||
Sbjct: 469 tctgagtcttcttctaaaatcccatattc 441



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 547 atatttgttttctgggctcccatattcgt 575
           ||||| ||||||||||||| |||||||||
Sbjct: 167 atattcgttttctgggctctcatattcgt 139



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 416 ccatattcgtcttctgagtcttcttcta 443
           |||||||| |||||||||||||| ||||
Sbjct: 415 ccatattcttcttctgagtcttcctcta 388



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                       
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||||| ||||||||||| |||  ||| | ||| || |||||| |||||| |||||
Sbjct: 147 catattcgtcctctgagtcttcctctcgagtcctatactcttcctctcgggtccgatatt 88
to top
>gb|AC145388.2| Oryza sativa chromosome 3 BAC OSJNBb0036M02 genomic sequence, complete
              sequence
          Length = 125380

 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 45/47 (95%)
 Strand = Plus / Plus

                                                             
Query: 45     ttcaggaaaatgaatatctccggaaaatattttgagttccgtatggc 91
              ||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 106406 ttcaggaaaatgaatatctccagaaaatatttttagttccgtatggc 106452
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>gb|AC135792.3| Oryza sativa chromosome 3 BAC OSJNBa0056E06 genomic sequence, complete
             sequence
          Length = 140720

 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 45/47 (95%)
 Strand = Plus / Plus

                                                            
Query: 45    ttcaggaaaatgaatatctccggaaaatattttgagttccgtatggc 91
             ||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 11240 ttcaggaaaatgaatatctccagaaaatatttttagttccgtatggc 11286
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>gb|AF372193.1| Panicum elephantipes DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 411

 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 111/135 (82%)
 Strand = Plus / Minus

                                                                       
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||||| ||||||||||| |||  ||| | ||| || |||||| | |||||||| |
Sbjct: 400 catattcgtcctctgagtcttcctctcgagtcctatactcttcctctcgagtcctatact 341

                                                                       
Query: 477 tgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttct 536
               |||| || ||| |||||| || |||||||||||||||| |||||||||||||| ||
Sbjct: 340 cttcctctcgggtccgatattcttcctctgagtctttctctagagtcctatattcgtcct 281

                          
Query: 537 ctgggttcccatatt 551
           || || |||||||||
Sbjct: 280 ctaggatcccatatt 266



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           |||||||||| || |||||||||||| |||||||||||||
Sbjct: 403 tctcatattcgtcctctgagtcttcctctcgagtcctata 364



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 50/57 (87%), Gaps = 3/57 (5%)
 Strand = Plus / Minus

                                                                    
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctct 652
           |||||||| |||||||| ||||||| |   ||||||| |||||||||||||||||||
Sbjct: 290 tattcgtcctctaggatcccatattca---tcttctagggtttcatattcgtcctct 237



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           |||||||||| || |||||||||||| |||||||||||||
Sbjct: 163 tctcatattcgtcctctgagtcttcctctcgagtcctata 124



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 74/90 (82%), Gaps = 9/90 (10%)
 Strand = Plus / Minus

                                                                       
Query: 564 tcccatattcgttttctagggtttcatattcgtattcgtcttctaggattccatatttag 623
           |||||||||| | |||||||||||||      |||||||| |||||||| ||||||| | 
Sbjct: 274 tcccatattcatcttctagggtttca------tattcgtcctctaggatcccatattca- 222

                                         
Query: 624 attcttctanggtttcatattcgtcctctc 653
             ||||||| ||||||||||||| ||||||
Sbjct: 221 --tcttctagggtttcatattcgccctctc 194



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           ||||| |||||| ||||||||||||||||||||
Sbjct: 171 ctctgtgctctcatattcgtcctctgagtcttc 139



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 329 tctgggctctcgtattcgtcctctgagtcttc 360
           |||| |||||| ||||||||||||||||||||
Sbjct: 410 tctgtgctctcatattcgtcctctgagtcttc 379
to top
>gb|AF372188.1| Panicum fauriei DNA-directed RNA polymerase beta' subunit 2 (rpoC2)
           gene, partial cds; chloroplast gene for chloroplast
           product
          Length = 436

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 63/72 (87%)
 Strand = Plus / Minus

                                                                       
Query: 480 tctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttctctg 539
           |||||||| | || ||||| || |||||||||||||||| |||||||||||||| |||| 
Sbjct: 274 tctctgggctaccgtattcttcctctgagtctttctctaragtcctatattcgtcctcta 215

                       
Query: 540 ggttcccatatt 551
           || |||||||||
Sbjct: 214 ggatcccatatt 203



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 61/71 (85%), Gaps = 3/71 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |   ||||||| ||||||||||||||||||| | 
Sbjct: 227 tattcgtcctctaggatcccatattca---tcttctagggtttcatattcgtcctctaga 171

                      
Query: 656 gtcctgtattc 666
           ||||| |||||
Sbjct: 170 gtcctatattc 160



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 350 tctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           ||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 431 tctgagtcttcctctgagtcttcttctaaagtcccatatt 392



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           |||||||||| || |||||||||||| |||||||||||||
Sbjct: 100 tctcatattcgtcctctgagtcttcctctcgagtcctata 61



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||||||| ||||||||||||| ||||| || ||||||||
Sbjct: 367 tcccatattcttcttctgagtcttcctctagagccctatatt 326



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 419 tctgagtcttcttctaaagtcccatattc 391



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 211 tcccatattcatcttctagggtttcatattcgt 179



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           ||||| |||||| ||||||||||||||||||||
Sbjct: 108 ctctgtgctctcatattcgtcctctgagtcttc 76



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 682 catattcctcttctgagtcttccgctcgagtcctatatt 720
           ||||||| ||||||||||||||| || ||| ||||||||
Sbjct: 364 catattcttcttctgagtcttcctctagagccctatatt 326



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 356 tcttcttctgagtcttcctcta 377
           ||||||||||||||||||||||
Sbjct: 359 tcttcttctgagtcttcctcta 338



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 596 tattcgtcttctaggattccatatt 620
           |||||||||||||||||| ||||||
Sbjct: 164 tattcgtcttctaggatttcatatt 140



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 416 ccatattcgtcttctgagtcttcttcta 443
           |||||||| |||||||||||||| ||||
Sbjct: 365 ccatattcttcttctgagtcttcctcta 338



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||  ||||||| |||||||||||||
Sbjct: 273 ctctgggctaccgtattcttcctctgagtctt 242



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||  ||| |||||||||||||| | ||||||||||
Sbjct: 200 tcttctagggtttcatattcgtcctctagagtcctatatt 161



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 568 atattcgttttctagggtttcatattcg 595
           |||||||| ||||||| |||||||||||
Sbjct: 165 atattcgtcttctaggatttcatattcg 138



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                       
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||||| ||||||||||| |||  ||| | ||| || |||||| |||||| |||||
Sbjct: 97  catattcgtcctctgagtcttcctctcgagtcctatactcttcctctcgggtccgatatt 38
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>gb|AF372203.1| Stenotaphrum secundatum DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 439

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 79/93 (84%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| ||||| |||||| | |||||||| |||| ||||| || ||||||||||||||||
Sbjct: 301 cctctcgggtcttatattcgttctctgggctcccgtattcgtcctctgagtctttctcta 242

                                            
Query: 519 aagtcctatattcgttctctgggttcccatatt 551
            || || |||||||| |||| || |||||||||
Sbjct: 241 gaggcccatattcgtcctctaggatcccatatt 209



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 60/70 (85%), Gaps = 3/70 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |   ||||||| ||||||||||||||||||| | 
Sbjct: 233 tattcgtcctctaggatcccatattca---tcttctagggtttcatattcgtcctctaga 177

                     
Query: 656 gtcctgtatt 665
           ||||| ||||
Sbjct: 176 gtcctatatt 167



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 350 tctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           ||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 437 tctgagtcttcctctgagtcttcttctaaagtcccatatt 398



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| |||||||||||||||||||||
Sbjct: 279 ctctgggctcccgtattcgtcctctgagtctt 248



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||||||| ||||||||||||| || || |||||||||||
Sbjct: 373 tcccatattcttcttctgagtcttcctttagagtcctatatt 332



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 425 tctgagtcttcttctaaagtcccatattc 397



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 217 tcccatattcatcttctagggtttcatattcgt 185



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 328 ctctgggctctcgtattcgtcctctgagt 356
           |||||||||||| ||||||||||||||||
Sbjct: 114 ctctgggctctcatattcgtcctctgagt 86



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 682 catattcctcttctgagtcttccgctcgagtcctatatt 720
           ||||||| |||||||||||||||  | ||||||||||||
Sbjct: 370 catattcttcttctgagtcttcctttagagtcctatatt 332



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 56/67 (83%)
 Strand = Plus / Minus

                                                                       
Query: 410 gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtc 469
           ||||| || |||||||| ||||||||||  |||| ||  ||||||||||||||| || ||
Sbjct: 275 gggctcccgtattcgtcctctgagtctttctctagaggcccatattcgtcctctaggatc 216

                  
Query: 470 ctatatt 476
           | |||||
Sbjct: 215 ccatatt 209



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 521 gtcctatattcgttctctgggttcccatatt 551
           ||||||||||||||||||||| || ||||||
Sbjct: 128 gtcctatattcgttctctgggctctcatatt 98



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                              
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagt 509
           ||||| |||||||||||| | |||||||| || ||||||| || |||||||
Sbjct: 136 cctctcgggtcctatattcgttctctgggctctcatattcgtcctctgagt 86



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatttg 478
           |||||||  ||| |||||||||||||| | ||||||||||||
Sbjct: 206 tcttctagggtttcatattcgtcctctagagtcctatatttg 165



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 59/71 (83%), Gaps = 1/71 (1%)
 Strand = Plus / Minus

                                                                       
Query: 648 cctctcgggtcctgtattccgtgttctanggtctcatattcctcttctgagtcttccgct 707
           ||||||||||||| |||| |||  |||  | |||||||||| || ||||||| |||| ||
Sbjct: 136 cctctcgggtcctatatt-cgttctctgggctctcatattcgtcctctgagttttcctct 78

                      
Query: 708 cgagtcctata 718
           ||| |||||||
Sbjct: 77  cgaatcctata 67
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>gb|AF372175.1| Echinochloa colona DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 402

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 69/81 (85%)
 Strand = Plus / Minus

                                                                       
Query: 471 tatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||| | |||||||| |||| ||||| || |||||||||||||||| |||| ||||||
Sbjct: 256 tatattcgttctctgggctcccgtattcttcctctgagtctttctctaragtcttatatt 197

                                
Query: 531 cgttctctgggttcccatatt 551
           ||  |||| || |||||||||
Sbjct: 196 cgbcctctaggatcccatatt 176



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 490 cccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||| || ||||||||||||| ||||| || ||||||||
Sbjct: 339 cccataatcttcttctgagtcttcctctaragycctatatt 299



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 352 tgagtcttcttctgagtcttcctctaaagtaccatatt 389
           ||||||||| ||||||||||| |||||||  |||||||
Sbjct: 402 tgagtcttcctctgagtcttcttctaaagycccatatt 365



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| ||||||| |||||||||||||
Sbjct: 246 ctctgggctcccgtattcttcctctgagtctt 215



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||  ||||||||
Sbjct: 392 tctgagtcttcttctaaagycccatattc 364



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 356 tcttcttctgagtcttcctctaaag 380
           |||||||||||||||||||||| ||
Sbjct: 332 tcttcttctgagtcttcctctarag 308



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                     
Query: 627 cttctanggtttcatattcgtcctct 652
           |||||| ||||||||||||| |||||
Sbjct: 172 cttctagggtttcatattcgycctct 147



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 520 agtcctatattcgttctctgggttcccatatt 551
           |||| ||||||||||||||||| |||| ||||
Sbjct: 261 agtcttatattcgttctctgggctcccgtatt 230



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 564 tcccatattcgttttctagggtttcatattcg 595
           ||||||||||   |||||||||||||||||||
Sbjct: 184 tcccatattcaccttctagggtttcatattcg 153



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 596 tattcgtcttctaggattccatat 619
           |||||||||||||||||| |||||
Sbjct: 137 tattcgtcttctaggatttcatat 114



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 34/40 (85%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           |||||||||  || ||||| |||||| |||||| ||||||
Sbjct: 73  tctcatattggtcctctgartcttcctctcgagkcctata 34
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>gb|AF372174.1| Echinochloa crus-galli DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 468

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 70/81 (86%)
 Strand = Plus / Minus

                                                                       
Query: 471 tatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||| | |||||||| |||| ||||| || |||||||||||||||| |||| ||||||
Sbjct: 349 tatattcgttctctgggctcccgtattcttcctctgagtctttctctagagtcttatatt 290

                                
Query: 531 cgttctctgggttcccatatt 551
           ||| |||| || |||||||||
Sbjct: 289 cgtcctctaggatcccatatt 269



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 490 cccatattcctcttctgagtctttctctaaagtcctatattcgt 533
           |||||| || ||||||||||||| ||||| ||||||||||||||
Sbjct: 432 cccataatcttcttctgagtcttcctctagagtcctatattcgt 389



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           |||||||||| || |||||||||||| |||||||||||||
Sbjct: 166 tctcatattcgtcctctgagtcttcctctcgagtcctata 127



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 60/71 (84%), Gaps = 3/71 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |    |||||| ||||||||||||||||||| | 
Sbjct: 293 tattcgtcctctaggatcccatattcac---cttctagggtttcatattcgtcctctaga 237

                      
Query: 656 gtcctgtattc 666
           ||||| |||||
Sbjct: 236 gtcctatattc 226



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||| ||||||| ||||||||||||||||||||
Sbjct: 174 ctctcggctctcatattcgtcctctgagtcttc 142



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 690 tcttctgagtcttccgctcgagtcctatattc 721
           ||||||||||||||| || |||||||||||||
Sbjct: 422 tcttctgagtcttcctctagagtcctatattc 391



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| ||||||| |||||||||||||
Sbjct: 339 ctctgggctcccgtattcttcctctgagtctt 308



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                       
Query: 465 gggtcctatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcc 524
           |||||||||||| | ||||| || || ||||||| || |||||||||| ||||  |||||
Sbjct: 190 gggtcctatattcgttctctcggctctcatattcgtcctctgagtcttcctctcgagtcc 131

               
Query: 525 tata 528
           ||||
Sbjct: 130 tata 127



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 356 tcttcttctgagtcttcctcta 377
           ||||||||||||||||||||||
Sbjct: 425 tcttcttctgagtcttcctcta 404



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 596 tattcgtcttctaggattccatatt 620
           |||||||||||||||||| ||||||
Sbjct: 395 tattcgtcttctaggatttcatatt 371



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           ||||||||||   ||||||||||||||||||||
Sbjct: 277 tcccatattcaccttctagggtttcatattcgt 245



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 596 tattcgtcttctaggattccatatt 620
           |||||||||||||||||| ||||||
Sbjct: 230 tattcgtcttctaggatttcatatt 206



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 416 ccatattcgtcttctgagtcttcttctaaagttccatattcgtc 459
           ||||| || |||||||||||||| |||| ||| | |||||||||
Sbjct: 431 ccataatcttcttctgagtcttcctctagagtcctatattcgtc 388



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 568 atattcgttttctagggtttcatattcg 595
           |||||||| ||||||| |||||||||||
Sbjct: 396 atattcgtcttctaggatttcatattcg 369



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 520 agtcctatattcgttctctgggttcccatatt 551
           |||| ||||||||||||||||| |||| ||||
Sbjct: 354 agtcttatattcgttctctgggctcccgtatt 323



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 568 atattcgttttctagggtttcatattcg 595
           |||||||| ||||||| |||||||||||
Sbjct: 231 atattcgtcttctaggatttcatattcg 204
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>gb|DQ069545.1| Typha latifolia RNA polymerase beta'' chain (rpoC2) gene, partial
            cds; chloroplast
          Length = 4161

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 48/52 (92%)
 Strand = Plus / Minus

                                                                
Query: 255  tttggtattttagactaaattcttttgttcctcgatgctcaatcaaaccctc 306
            ||||||||||  |||||||||||||||||||||||| |||||||||| ||||
Sbjct: 1975 tttggtatttcggactaaattcttttgttcctcgatactcaatcaaatcctc 1924



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 66/79 (83%)
 Strand = Plus / Minus

                                                                        
Query: 100  ctcttcactcggaccagtccgcctagtccacttcttgtattttttgtgagttgtgtatcc 159
            |||| ||||||||| | ||| |||| ||  ||||||||||||   |||||| ||||||| 
Sbjct: 2129 ctctccactcggactaatccacctactcggcttcttgtatttaaagtgagtcgtgtatct 2070

                               
Query: 160  actccaataatactattgt 178
            |||||||| ||||||||||
Sbjct: 2069 actccaatgatactattgt 2051



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 29   atatcttatctgcctcttcaggaaaatgaatatctccggaaaatatttt 77
            |||||||||||| |||  |||||||||||||||| || ||||| |||||
Sbjct: 2200 atatcttatctgtctcgccaggaaaatgaatatcgccagaaaagatttt 2152
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>gb|AF372189.1| Panicum nephelophilum DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 476

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 63/72 (87%)
 Strand = Plus / Minus

                                                                       
Query: 480 tctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttctctg 539
           |||||||| | || ||||| || |||||||||||||||| |||||||||||||| |||| 
Sbjct: 301 tctctgggctaccgtattcttcctctgagtctttctctagagtcctatattcgtcctcta 242

                       
Query: 540 ggttcccatatt 551
           || |||||||||
Sbjct: 241 ggatcccatatt 230



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                     
Query: 332 gggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           || ||| | |||||||| ||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 476 ggrctcccrtattcgtcttctgagtcttcctctgagtcttcttctaaagtcccatatt 419



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 50/57 (87%), Gaps = 3/57 (5%)
 Strand = Plus / Minus

                                                                    
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctct 652
           |||||||| |||||||| ||||||| |   ||||||| |||||||||||||||||||
Sbjct: 254 tattcgtcctctaggatcccatattca---tcttctagggtttcatattcgtcctct 201



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           |||||||||| || |||||||||||| |||||||||||||
Sbjct: 127 tctcatattcgtcctctgagtcttcctctcgagtcctata 88



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           ||||| |||||| ||||||||||||||||||||
Sbjct: 135 ctctgkgctctcatattcgtcctctgagtcttc 103



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||||||| ||||||||||||| ||||| || ||||||||
Sbjct: 394 tcccatattcttcttctgagtcttcctctagagccctatatt 353



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 446 tctgagtcttcttctaaagtcccatattc 418



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 238 tcccatattcatcttctagggtttcatattcgt 206



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 682 catattcctcttctgagtcttccgctcgagtcctatatt 720
           ||||||| ||||||||||||||| || ||| ||||||||
Sbjct: 391 catattcttcttctgagtcttcctctagagccctatatt 353



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 356 tcttcttctgagtcttcctcta 377
           ||||||||||||||||||||||
Sbjct: 386 tcttcttctgagtcttcctcta 365



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 416 ccatattcgtcttctgagtcttc 438
           || ||||||||||||||||||||
Sbjct: 470 ccrtattcgtcttctgagtcttc 448



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 596 tattcgtcttctaggattccatatt 620
           |||||||||||||||||| ||||||
Sbjct: 191 tattcgtcttctaggatttcatatt 167



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 416 ccatattcgtcttctgagtcttcttcta 443
           |||||||| |||||||||||||| ||||
Sbjct: 392 ccatattcttcttctgagtcttcctcta 365



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||  ||||||| |||||||||||||
Sbjct: 300 ctctgggctaccgtattcttcctctgagtctt 269



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 568 atattcgttttctagggtttcatattcg 595
           |||||||| ||||||| |||||||||||
Sbjct: 192 atattcgtcttctaggatttcatattcg 165
to top
>gb|AF039195.1|LCLRPO2 Lathraea clandestina chloroplast RNA polymerase gamma subunit 2
           (rpoC2) pseudogene, chloroplast pseudogene, partial
           sequence
          Length = 330

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                   
Query: 29  atatcttatctgcctcttcaggaaaatgaatatctccggaaaatattttgagttcc 84
           |||||||||||| |||| |||||||||| |||||||| ||||||||||| ||||||
Sbjct: 315 atatcttatctgtctctccaggaaaatggatatctccagaaaatattttaagttcc 260
to top
>gb|AF372173.1| Digitaria insularis DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 451

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                        
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgt 533
           |||||||||| ||||||||||||| ||||| ||||||||||||||
Sbjct: 364 tcccatattcttcttctgagtcttcctctaragtcctatattcgt 320



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 74/87 (85%)
 Strand = Plus / Minus

                                                                       
Query: 465 gggtcctatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcc 524
           ||||| |||||| | |||||||| |||| ||||| || ||||||||||| |||| |||||
Sbjct: 286 gggtcttatattcgttctctgggctcccgtattcgtcctctgagtctttttctagagtcc 227

                                      
Query: 525 tatattcgttctctgggttcccatatt 551
           ||||||||| |||| |  |||||||||
Sbjct: 226 tatattcgtcctctagaatcccatatt 200



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                     
Query: 332 gggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           |||||| | |||||||| ||||||||||| ||||||||||| || ||||| |||||||
Sbjct: 446 gggctcccatattcgtcttctgagtcttcctctgagtcttcttcgaaagtcccatatt 389



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||| | |||||||| || ||||||| || |||||||||| |||| 
Sbjct: 127 cctctcgggtcctatattcgttctctgggctctcatattcgtcctctgagtcttcctctc 68

                     
Query: 519 aagtcctata 528
            |||||||||
Sbjct: 67  gagtcctata 58



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                
Query: 328 ctctgggctctcgtattcgtcctctgagtcttcttct 364
           |||||||||| ||||||||||||||||||||| ||||
Sbjct: 270 ctctgggctcccgtattcgtcctctgagtctttttct 234



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| ||||||||||||||||||||
Sbjct: 105 ctctgggctctcatattcgtcctctgagtcttc 73



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 61/71 (85%), Gaps = 1/71 (1%)
 Strand = Plus / Minus

                                                                       
Query: 648 cctctcgggtcctgtattccgtgttctanggtctcatattcctcttctgagtcttccgct 707
           ||||||||||||| |||| |||  |||  | |||||||||| || |||||||||||| ||
Sbjct: 127 cctctcgggtcctatatt-cgttctctgggctctcatattcgtcctctgagtcttcctct 69

                      
Query: 708 cgagtcctata 718
           |||||||||||
Sbjct: 68  cgagtcctata 58



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| ||||||||||||||| ||  ||||||||||||
Sbjct: 361 catattcttcttctgagtcttcctctaragtcctatattc 322



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 416 ccatattcgtcttctgagtcttcttctaaagttccatattcgtc 459
           |||||||| |||||||||||||| |||| ||| | |||||||||
Sbjct: 362 ccatattcttcttctgagtcttcctctaragtcctatattcgtc 319



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                 
Query: 410 gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctct 463
           ||||| || |||||||| |||||||||| ||||| ||| | |||||||||||||
Sbjct: 266 gggctcccgtattcgtcctctgagtctttttctagagtcctatattcgtcctct 213



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 410 gggctgccatattcgtcttctgagtcttc 438
           ||||| |||||||||||||||||||||||
Sbjct: 446 gggctcccatattcgtcttctgagtcttc 418



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 356 tcttcttctgagtcttcctctaaagt 381
           |||||||||||||||||||||| |||
Sbjct: 356 tcttcttctgagtcttcctctaragt 331



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 521 gtcctatattcgttctctgggttcccatatt 551
           ||||||||||||||||||||| || ||||||
Sbjct: 119 gtcctatattcgttctctgggctctcatatt 89



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 596 tattcgtcttctaggattccatattt 621
           |||||||||||||||||| |||||||
Sbjct: 326 tattcgtcttctaggatttcatattt 301



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 564 tcccatattcgttttctagggtttcatatt 593
           |||||||||| | |||||||||||||||||
Sbjct: 208 tcccatattcatcttctagggtttcatatt 179



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 489 tcccatattcctcttctgagtctttctct 517
           |||||||||| ||||||||||||| ||||
Sbjct: 442 tcccatattcgtcttctgagtcttcctct 414



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||| ||||| ||||||||
Sbjct: 416 tctgagtcttcttcgaaagtcccatattc 388
to top
>gb|AF372168.1| Digitaria radicosa DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 442

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                        
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgt 533
           |||||||||| ||||||||||||| ||||| ||||||||||||||
Sbjct: 364 tcccatattcttcttctgagtcttcctctaragtcctatattcgt 320



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 63/74 (85%)
 Strand = Plus / Minus

                                                                       
Query: 465 gggtcctatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcc 524
           ||||| |||||| | |||||||| |||| ||||| || ||||||| ||| |||| |||||
Sbjct: 286 gggtcttatattcgttctctgggctcccgtattcgtcctctgagtttttttctagagtcc 227

                         
Query: 525 tatattcgttctct 538
           ||||||||| ||||
Sbjct: 226 tatattcgtcctct 213



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||| | |||||||| || ||||||| || |||||||||| |||| 
Sbjct: 127 cctctcgggtcctatattcgttctctgggctctcatattcgtcctctgagtcttcctctc 68

                     
Query: 519 aagtcctata 528
            |||||||||
Sbjct: 67  gagtcctata 58



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| ||||||||||||||||||||
Sbjct: 105 ctctgggctctcatattcgtcctctgagtcttc 73



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 61/71 (85%), Gaps = 1/71 (1%)
 Strand = Plus / Minus

                                                                       
Query: 648 cctctcgggtcctgtattccgtgttctanggtctcatattcctcttctgagtcttccgct 707
           ||||||||||||| |||| |||  |||  | |||||||||| || |||||||||||| ||
Sbjct: 127 cctctcgggtcctatatt-cgttctctgggctctcatattcgtcctctgagtcttcctct 69

                      
Query: 708 cgagtcctata 718
           |||||||||||
Sbjct: 68  cgagtcctata 58



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| ||||||||||||||| ||  ||||||||||||
Sbjct: 361 catattcttcttctgagtcttcctctaragtcctatattc 322



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 416 ccatattcgtcttctgagtcttcttctaaagttccatattcgtc 459
           |||||||| |||||||||||||| |||| ||| | |||||||||
Sbjct: 362 ccatattcttcttctgagtcttcctctaragtcctatattcgtc 319



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 328 ctctgggctctcgtattcgtcctctgagt 356
           |||||||||| ||||||||||||||||||
Sbjct: 270 ctctgggctcccgtattcgtcctctgagt 242



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 208 tcccatattcatcttctagggtttcatattcgt 176



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 356 tcttcttctgagtcttcctctaaagt 381
           |||||||||||||||||||||| |||
Sbjct: 356 tcttcttctgagtcttcctctaragt 331



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 626 tcttctanggtttcatattcgtcctct 652
           ||||||| |||||||||||||||||||
Sbjct: 197 tcttctagggtttcatattcgtcctct 171



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 521 gtcctatattcgttctctgggttcccatatt 551
           ||||||||||||||||||||| || ||||||
Sbjct: 119 gtcctatattcgttctctgggctctcatatt 89



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 352 tgagtcttcttctgagtcttcctctaaagtaccatatt 389
           ||||||||| ||||||||||| || ||||| |||||||
Sbjct: 426 tgagtcttcctctgagtcttcttcgaaagtcccatatt 389



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                 
Query: 410 gggctgccatattcgtcttctgagtcttcttctaaagttccatattcgtcctct 463
           ||||| || |||||||| ||||||| || ||||| ||| | |||||||||||||
Sbjct: 266 gggctcccgtattcgtcctctgagtttttttctagagtcctatattcgtcctct 213



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||| ||||| ||||||||
Sbjct: 416 tctgagtcttcttcgaaagtcccatattc 388
to top
>gb|AF000021.1|PMAF000021 Panicum maximum RNA polymerase beta-subunit (rpoC2) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 468

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 59/67 (88%)
 Strand = Plus / Minus

                                                                       
Query: 323 tcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagta 382
           |||||||| |||| | | |||||||||||||||||||| ||||||||||| |||||| | 
Sbjct: 468 tcttcctccgggcccccatattcgtcctctgagtcttcctctgagtcttcttctaaaatc 409

                  
Query: 383 ccatatt 389
           |||||||
Sbjct: 408 ccatatt 402



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                            
Query: 503 tctgagtctttctctaaagtcctatattcgttctctgggttcccatatt 551
           |||||||||||||||| |||||||||||||| |||| || |||||||||
Sbjct: 249 tctgagtctttctctagagtcctatattcgtcctctaggatcccatatt 201



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                             
Query: 328 ctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctcta 377
           |||||||||| ||||||| |||||||||||||  |||||||||| |||||
Sbjct: 283 ctctgggctcccgtattcttcctctgagtctttctctgagtctttctcta 234



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                    
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatat 529
           |||||||||| ||||||||||||| ||||| ||||||||||
Sbjct: 377 tcccatattcttcttctgagtcttcctctagagtcctatat 337



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 60/70 (85%), Gaps = 3/70 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |   ||||||| ||||||||||||||||||| | 
Sbjct: 225 tattcgtcctctaggatcccatattca---tcttctagggtttcatattcgtcctctaga 169

                     
Query: 656 gtcctgtatt 665
           ||||| ||||
Sbjct: 168 gtcctatatt 159



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           |||||||||| || |||||||||||| |||||||||||||
Sbjct: 98  tctcatattcttcctctgagtcttcctctcgagtcctata 59



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 682 catattcctcttctgagtcttccgctcgagtcctatat 719
           ||||||| ||||||||||||||| || |||||||||||
Sbjct: 374 catattcttcttctgagtcttcctctagagtcctatat 337



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 209 tcccatattcatcttctagggtttcatattcgt 177



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| ||||| ||||||||||||||
Sbjct: 106 ctctgggctctcatattcttcctctgagtcttc 74



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 356 tcttcttctgagtcttcctcta 377
           ||||||||||||||||||||||
Sbjct: 369 tcttcttctgagtcttcctcta 348



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 480 tctctgggttcccatattcctcttctgagtctttctct 517
           |||||||| |||| ||||| || |||||||||||||||
Sbjct: 284 tctctgggctcccgtattcttcctctgagtctttctct 247



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatttg 478
           |||||||  ||| |||||||||||||| | ||||||||||||
Sbjct: 198 tcttctagggtttcatattcgtcctctagagtcctatatttg 157



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||| | ||||||||
Sbjct: 429 tctgagtcttcttctaaaatcccatattc 401



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 416 ccatattcgtcttctgagtcttcttcta 443
           |||||||| |||||||||||||| ||||
Sbjct: 375 ccatattcttcttctgagtcttcctcta 348
to top
>gb|AF372201.1| Pennisetum clandestinum DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 467

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 40/42 (95%)
 Strand = Plus / Minus

                                                     
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 394 tcccatattcttcttctgagtctttctctagagtcctatatt 353



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 62/71 (87%), Gaps = 1/71 (1%)
 Strand = Plus / Minus

                                                                       
Query: 648 cctctcgggtcctgtattccgtgttctanggtctcatattcctcttctgagtcttccgct 707
           ||||||||||||| ||||| || ||||  | |||||||||| || |||||||||||| ||
Sbjct: 157 cctctcgggtcctatattc-gttttctgggctctcatattcgtcctctgagtcttcctct 99

                      
Query: 708 cgagtcctata 718
           |||||||||||
Sbjct: 98  cgagtcctata 88



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 77/93 (82%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| ||||| |||||| | |||||||| |||| ||||| || ||||||||||||||||
Sbjct: 322 cctctcgggtcttatattcgttctctgggctcccgtattcttcctctgagtctttctcta 263

                                            
Query: 519 aagtcctatattcgttctctgggttcccatatt 551
            || || ||||| || |||  || |||||||||
Sbjct: 262 raggcccatatttgtcctccaggatcccatatt 230



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                            
Query: 341 tattcgtcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           |||||||| ||||||||||| ||||||||||| |||||| | |||||||
Sbjct: 467 tattcgtcttctgagtcttcctctgagtcttcttctaaaatcccatatt 419



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                           
Query: 329 tctgggctctcgtattcgtcctctgagtcttc 360
           ||||||||||| ||||||||||||||||||||
Sbjct: 134 tctgggctctcatattcgtcctctgagtcttc 103



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||| | | |||||| || ||||||| || |||||||||| |||| 
Sbjct: 157 cctctcgggtcctatattcgttttctgggctctcatattcgtcctctgagtcttcctctc 98

                     
Query: 519 aagtcctata 528
            |||||||||
Sbjct: 97  gagtcctata 88



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 238 tcccatattcatcttctagggtttcatattcgt 206



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| ||||||| |||||||||||||
Sbjct: 300 ctctgggctcccgtattcttcctctgagtctt 269



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 626 tcttctanggtttcatattcgtcctct 652
           ||||||| |||||||||||||||||||
Sbjct: 227 tcttctagggtttcatattcgtcctct 201



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 682 catattcctcttctgagtcttccgctcgagtcctatatt 720
           ||||||| ||||||||||||| | || ||||||||||||
Sbjct: 391 catattcttcttctgagtctttctctagagtcctatatt 353



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||| | ||||||||
Sbjct: 446 tctgagtcttcttctaaaatcccatattc 418



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 547 atatttgttttctgggctcccatattcgt 575
           ||||| ||||||||||||| |||||||||
Sbjct: 144 atattcgttttctgggctctcatattcgt 116



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 419 tattcgtcttctgagtcttc 438
           ||||||||||||||||||||
Sbjct: 467 tattcgtcttctgagtcttc 448



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 36/42 (85%)
 Strand = Plus / Minus

                                                     
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatttg 478
           |||||||  ||| ||||||||||||||   ||||||||||||
Sbjct: 227 tcttctagggtttcatattcgtcctctasagtcctatatttg 186
to top
>gb|AF372199.1| Panicum tenuifolium DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 438

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                       
Query: 480 tctctgggttcccatattcctcttctgagtctttctctaaagtcctatattcgttctctg 539
           |||||||| | || ||||| || |||||||||||||||| || ||||||||||  |||| 
Sbjct: 280 tctctgggctaccgtattcttcctctgagtctttctctaragycctatattcgycctcta 221

                       
Query: 540 ggttcccatatt 551
           || |||||||||
Sbjct: 220 ggatcccatatt 209



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 350 tctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           ||||||||||| ||||||||||| |||||||  |||||||
Sbjct: 437 tctgagtcttcctctgagtcttcttctaaagwcccatatt 398



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||||||| ||||||||||||| ||| | || ||||||||
Sbjct: 373 tcccatattcttcttctgagtcttcctcwagagccctatatt 332



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 48/57 (84%), Gaps = 3/57 (5%)
 Strand = Plus / Minus

                                                                    
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctct 652
           |||||| | |||||||| ||||||| |   ||||||| || ||||||||||||||||
Sbjct: 233 tattcgycctctaggatcccatattca---tcttctagggkttcatattcgtcctct 180



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           ||||| |||||| |||||| |||||||||||||
Sbjct: 114 ctctgkgctctcatattcgncctctgagtcttc 82



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||  ||||||||
Sbjct: 425 tctgagtcttcttctaaagwcccatattc 397



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | |||||||| |||||||||||
Sbjct: 217 tcccatattcatcttctagggkttcatattcgt 185



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 679 tctcatattcctcttctgagtcttccgctcgagtccta 716
           ||||||||||  | |||||||||||| |||||||||||
Sbjct: 106 tctcatattcgncctctgagtcttcctctcgagtccta 69



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 596 tattcgtcttctaggattccatatt 620
           |||||||||||||||||| ||||||
Sbjct: 170 tattcgtcttctaggatttcatatt 146



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 356 tcttcttctgagtcttcctc 375
           ||||||||||||||||||||
Sbjct: 365 tcttcttctgagtcttcctc 346



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||  ||||||| |||||||||||||
Sbjct: 279 ctctgggctaccgtattcttcctctgagtctt 248



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 568 atattcgttttctagggtttcatattcg 595
           |||||||| ||||||| |||||||||||
Sbjct: 171 atattcgtcttctaggatttcatattcg 144
to top
>gb|AF372198.1| Pennisetum setaceum DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 301

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                     
Query: 332 gggctctcgtattcgtcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           |||||| | |||||||| ||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 300 gggctcccatattcgtcttctgagtcttcctctgagtcttcttctaaagtcccatatt 243



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 62/71 (87%), Gaps = 1/71 (1%)
 Strand = Plus / Minus

                                                                       
Query: 648 cctctcgggtcctgtattccgtgttctanggtctcatattcctcttctgagtcttccgct 707
           ||||||||||||| ||||| || ||||  | |||||||||| || |||||||||||| ||
Sbjct: 146 cctctcgggtcctatattc-gttttctgggctctcatattcatcctctgagtcttcctct 88

                      
Query: 708 cgagtcctata 718
           |||||||||||
Sbjct: 87  cgagtcctata 77



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                     
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||||||| ||||||||||||| ||||| |||||||||||
Sbjct: 218 tcccatattcttcttctgagtcttcctctagagtcctatatt 177



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 682 catattcctcttctgagtcttccgctcgagtcctatatt 720
           ||||||| ||||||||||||||| || ||||||||||||
Sbjct: 215 catattcttcttctgagtcttcctctagagtcctatatt 177



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 409 ggggctgccatattcgtcttctgagtcttc 438
           |||||| |||||||||||||||||||||||
Sbjct: 301 ggggctcccatattcgtcttctgagtcttc 272



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||| | | |||||| || ||||||| || |||||||||| |||| 
Sbjct: 146 cctctcgggtcctatattcgttttctgggctctcatattcatcctctgagtcttcctctc 87

                     
Query: 519 aagtcctata 528
            |||||||||
Sbjct: 86  gagtcctata 77



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 270 tctgagtcttcttctaaagtcccatattc 242



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 329 tctgggctctcgtattcgtcctctgagtcttc 360
           ||||||||||| ||||| ||||||||||||||
Sbjct: 123 tctgggctctcatattcatcctctgagtcttc 92



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 356 tcttcttctgagtcttcctctaaagtaccatattt 390
           |||||||||||||||||||||| ||| | ||||||
Sbjct: 210 tcttcttctgagtcttcctctagagtcctatattt 176



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 489 tcccatattcctcttctgagtctttctct 517
           |||||||||| ||||||||||||| ||||
Sbjct: 296 tcccatattcgtcttctgagtcttcctct 268



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 416 ccatattcgtcttctgagtcttcttcta 443
           |||||||| |||||||||||||| ||||
Sbjct: 216 ccatattcttcttctgagtcttcctcta 189
to top
>gb|AF372177.1| Eriochloa punctata DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 491

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 64/76 (84%)
 Strand = Plus / Minus

                                                                       
Query: 314 aagatggaatcttcctctgggctctcgtattcgtcctctgagtcttcttctgagtcttcc 373
           |||| ||||| | |||| || ||| | || ||||| ||||||||||| ||||||||||| 
Sbjct: 485 aagagggaatytycctccggrctcccatactcgtcttctgagtcttcctctgagtcttct 426

                           
Query: 374 tctaaagtaccatatt 389
           |||||||| |||||||
Sbjct: 425 tctaaagtcccatatt 410



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                            
Query: 503 tctgagtctttctctaaagtcctatattcgttctctgggttcccatatt 551
           |||||||||||||||| |||||||||||||| |||| || |||||||||
Sbjct: 257 tctgagtctttctctagagtcctatattcgtcctctaggatcccatatt 209



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                     
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||||||| ||||||||||||| ||||| |||||||||||
Sbjct: 385 tcccatattcttcttctgagtcttcctctagagtcctatatt 344



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                            
Query: 329 tctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctcta 377
           ||||||||| ||||||| |||||||||||||  |||||||||| |||||
Sbjct: 290 tctgggctcccgtattcttcctctgagtctttctctgagtctttctcta 242



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 60/70 (85%), Gaps = 3/70 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||| ||||||| |   ||||||| ||||||||||||||||||| | 
Sbjct: 233 tattcgtcctctaggatcccatattca---tcttctagggtttcatattcgtcctctaga 177

                     
Query: 656 gtcctgtatt 665
           ||||| ||||
Sbjct: 176 gtcctatatt 167



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| ||||||||||||||||||||
Sbjct: 114 ctctgggctctcatattcgtcctctgagtcttc 82



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           |||||||||| || |||||||||||| |||||||||||||
Sbjct: 106 tctcatattcgtcctctgagtcttcctctcgagtcctata 67



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 682 catattcctcttctgagtcttccgctcgagtcctatatt 720
           ||||||| ||||||||||||||| || ||||||||||||
Sbjct: 382 catattcttcttctgagtcttcctctagagtcctatatt 344



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 437 tctgagtcttcttctaaagtcccatattc 409



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 217 tcccatattcatcttctagggtttcatattcgt 185



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 356 tcttcttctgagtcttcctctaaagtaccatattt 390
           |||||||||||||||||||||| ||| | ||||||
Sbjct: 377 tcttcttctgagtcttcctctagagtcctatattt 343



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                      
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctct 517
           ||||| ||||| |||||| | | |||||| |||| ||||| || |||||||||||||||
Sbjct: 313 cctctcgggtcttatattcgttttctgggctcccgtattcttcctctgagtctttctct 255



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatttg 478
           |||||||  ||| |||||||||||||| | ||||||||||||
Sbjct: 206 tcttctagggtttcatattcgtcctctagagtcctatatttg 165



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 416 ccatattcgtcttctgagtcttcttcta 443
           |||||||| |||||||||||||| ||||
Sbjct: 383 ccatattcttcttctgagtcttcctcta 356
to top
>gb|AF372213.1| Urochloa reptans DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 528

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                            
Query: 503 tctgagtctttctctaaagtcctatattcgttctctgggttcccatatt 551
           |||||||||||||||| |||||||||||||| |||| || |||||||||
Sbjct: 335 tctgagtctttctctagagtcctatattcgtcctctaggatcccatatt 287



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                            
Query: 329 tctgggctctcgtattcgtcctctgagtcttcttctgagtcttcctcta 377
           ||||||||| ||||||| |||||||||||||  |||||||||| |||||
Sbjct: 368 tctgggctcccgtattcttcctctgagtctttctctgagtctttctcta 320



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 491 ccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||||| ||||||||||||| ||||| |||||||||||
Sbjct: 461 ccatattcttcttctgagtcttcctctagagtcctatatt 422



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 682 catattcctcttctgagtcttccgctcgagtcctatatt 720
           ||||||| ||||||||||||||| || ||||||||||||
Sbjct: 460 catattcttcttctgagtcttcctctagagtcctatatt 422



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                      
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctct 517
           ||||| ||||| |||||||| | |||||| |||| ||||| || |||||||||||||||
Sbjct: 391 cctctcgggtcttatatttgttttctgggctcccgtattcttcctctgagtctttctct 333



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 352 tgagtcttcttctgagtcttcctctaaagtaccatatt 389
           ||||||||| ||||||||||| |||||||| |||||||
Sbjct: 525 tgagtcttcctctgagtcttcttctaaagtcccatatt 488



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 48/55 (87%), Gaps = 3/55 (5%)
 Strand = Plus / Minus

                                                                  
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcct 650
           |||||||| |||||||| ||||||| |   ||||||| |||||||||||||||||
Sbjct: 311 tattcgtcctctaggatcccatattca---tcttctagggtttcatattcgtcct 260



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 323 tcttcctctgggctctcgtattcgtcctctgagtcttc 360
           |||| |||||||||||| ||||||||||| ||||||||
Sbjct: 197 tctttctctgggctctcatattcgtcctccgagtcttc 160



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 515 tctgagtcttcttctaaagtcccatattc 487



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 564 tcccatattcgttttctagggtttcatattcgt 596
           |||||||||| | ||||||||||||||||||||
Sbjct: 295 tcccatattcatcttctagggtttcatattcgt 263



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 356 tcttcttctgagtcttcctctaaagtaccatattt 390
           |||||||||||||||||||||| ||| | ||||||
Sbjct: 455 tcttcttctgagtcttcctctagagtcctatattt 421



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 547 atatttgttttctgggctcccatattc 573
           ||||||||||||||||||||| |||||
Sbjct: 378 atatttgttttctgggctcccgtattc 352



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 416 ccatattcgtcttctgagtcttcttcta 443
           |||||||| |||||||||||||| ||||
Sbjct: 461 ccatattcttcttctgagtcttcctcta 434
to top
>gb|AF372204.1| Setaria gracilis DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 439

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 78/93 (83%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| ||||| |||||| | |||||||| |||| ||||| || ||||||||||||||||
Sbjct: 301 cctctcgggtcttatattcgttctctgggctcccgtattcttcctctgagtctttctcta 242

                                            
Query: 519 aagtcctatattcgttctctgggttcccatatt 551
            || || |||||||| |||| || | |||||||
Sbjct: 241 gaggcccatattcgtcctctaggattccatatt 209



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 61/70 (87%), Gaps = 3/70 (4%)
 Strand = Plus / Minus

                                                                       
Query: 596 tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctctcgg 655
           |||||||| |||||||||||||||| |   ||||||| ||||||||||||||||||| | 
Sbjct: 233 tattcgtcctctaggattccatattca---tcttctagggtttcatattcgtcctctaga 177

                     
Query: 656 gtcctgtatt 665
           ||||| ||||
Sbjct: 176 gtcctatatt 167



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                     
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||||||| ||||||||||||| ||||| |||||||||||
Sbjct: 373 tcccatattcttcttctgagtcttcctctagagtcctatatt 332



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||| | | |||||| || ||||||| || |||||||||| |||||
Sbjct: 136 cctctcgggtcctatattcgttttctgggctctcatattcgtcctctgagtcttcctcta 77

                     
Query: 519 aagtcctata 528
            |||||||||
Sbjct: 76  gagtcctata 67



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 350 tctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           ||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 437 tctgagtcttcctctgagtcttcttctaaagtcccatatt 398



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                           
Query: 329 tctgggctctcgtattcgtcctctgagtcttc 360
           ||||||||||| ||||||||||||||||||||
Sbjct: 113 tctgggctctcatattcgtcctctgagtcttc 82



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 61/71 (85%), Gaps = 1/71 (1%)
 Strand = Plus / Minus

                                                                       
Query: 648 cctctcgggtcctgtattccgtgttctanggtctcatattcctcttctgagtcttccgct 707
           ||||||||||||| ||||| || ||||  | |||||||||| || |||||||||||| ||
Sbjct: 136 cctctcgggtcctatattc-gttttctgggctctcatattcgtcctctgagtcttcctct 78

                      
Query: 708 cgagtcctata 718
            ||||||||||
Sbjct: 77  agagtcctata 67



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 682 catattcctcttctgagtcttccgctcgagtcctatatt 720
           ||||||| ||||||||||||||| || ||||||||||||
Sbjct: 370 catattcttcttctgagtcttcctctagagtcctatatt 332



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 425 tctgagtcttcttctaaagtcccatattc 397



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 328 ctctgggctctcgtattcgtcctctgagtctt 359
           |||||||||| ||||||| |||||||||||||
Sbjct: 279 ctctgggctcccgtattcttcctctgagtctt 248



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                       
Query: 417 catattcgtcttctgagtcttcttctaaagttccatattcgtcctcttgggtcctatatt 476
           |||||||||| ||||||||||| |||| ||| | ||| || |||||| |||||| |||||
Sbjct: 103 catattcgtcctctgagtcttcctctagagtcctatactcttcctctcgggtccgatatt 44



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 356 tcttcttctgagtcttcctctaaagtaccatattt 390
           |||||||||||||||||||||| ||| | ||||||
Sbjct: 365 tcttcttctgagtcttcctctagagtcctatattt 331



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 566 ccatattcgttttctagggtttcatattcgt 596
           |||||||| | ||||||||||||||||||||
Sbjct: 215 ccatattcatcttctagggtttcatattcgt 185



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 437 tcttctaaagttccatattcgtcctcttgggtcctatatttg 478
           |||||||  ||| |||||||||||||| | ||||||||||||
Sbjct: 206 tcttctagggtttcatattcgtcctctagagtcctatatttg 165



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 547 atatttgttttctgggctcccatattcgt 575
           ||||| ||||||||||||| |||||||||
Sbjct: 123 atattcgttttctgggctctcatattcgt 95



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 416 ccatattcgtcttctgagtcttcttcta 443
           |||||||| |||||||||||||| ||||
Sbjct: 371 ccatattcttcttctgagtcttcctcta 344
to top
>gb|AF372200.1| Pennisetum purpureum DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 286

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                            
Query: 341 tattcgtcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           |||||||| ||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 281 tattcgtcttctgagtcttcctctgagtcttcttctaaagtcccatatt 233



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 62/71 (87%), Gaps = 1/71 (1%)
 Strand = Plus / Minus

                                                                       
Query: 648 cctctcgggtcctgtattccgtgttctanggtctcatattcctcttctgagtcttccgct 707
           ||||||||||||| ||||| || ||||  | |||||||||| || |||||||||||| ||
Sbjct: 136 cctctcgggtcctatattc-gttttctgggctctcatattcgtcctctgagtcttcctct 78

                      
Query: 708 cgagtcctata 718
           |||||||||||
Sbjct: 77  cgagtcctata 67



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                           
Query: 329 tctgggctctcgtattcgtcctctgagtcttc 360
           ||||||||||| ||||||||||||||||||||
Sbjct: 113 tctgggctctcatattcgtcctctgagtcttc 82



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||||||| | ||||||||||| ||||| |||||||||||
Sbjct: 208 tcccatattctttttctgagtcttcctctagagtcctatatt 167



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||| | | |||||| || ||||||| || |||||||||| |||| 
Sbjct: 136 cctctcgggtcctatattcgttttctgggctctcatattcgtcctctgagtcttcctctc 77

                     
Query: 519 aagtcctata 528
            |||||||||
Sbjct: 76  gagtcctata 67



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||||||||| ||||||||
Sbjct: 260 tctgagtcttcttctaaagtcccatattc 232



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 682 catattcctcttctgagtcttccgctcgagtcctatatt 720
           ||||||| | ||||||||||||| || ||||||||||||
Sbjct: 205 catattctttttctgagtcttcctctagagtcctatatt 167



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 416 ccatattcgtcttctgagtcttc 438
           || ||||||||||||||||||||
Sbjct: 284 ccrtattcgtcttctgagtcttc 262



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 547 atatttgttttctgggctcccatattcgt 575
           ||||| ||||||||||||| |||||||||
Sbjct: 123 atattcgttttctgggctctcatattcgt 95
to top
>gb|AF372171.1| Digitaria setigera DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 437

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                        
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatattcgt 533
           |||||||||| ||||||||||||| ||||| ||||||||||||||
Sbjct: 364 tcccatattcttcttctgagtcttcctctagagtcctatattcgt 320



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                            
Query: 341 tattcgtcctctgagtcttcttctgagtcttcctctaaagtaccatatt 389
           |||||||| ||||||||||| ||||||||||| || ||||| |||||||
Sbjct: 437 tattcgtcttctgagtcttcctctgagtcttcttcgaaagtcccatatt 389



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                            
Query: 328 ctctgggctctcgtattcgtcctctgagtcttc 360
           |||||||||||| ||||||||||||||||||||
Sbjct: 105 ctctgggctctcatattcgtcctctgagtcttc 73



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 682 catattcctcttctgagtcttccgctcgagtcctatattc 721
           ||||||| ||||||||||||||| || |||||||||||||
Sbjct: 361 catattcttcttctgagtcttcctctagagtcctatattc 322



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                       
Query: 465 gggtcctatatttgctctctgggttcccatattcctcttctgagtctttctctaaagtcc 524
           ||||| |||||| | |||||||| |||| ||||| || ||||||| ||| |||| |||||
Sbjct: 286 gggtcttatattcgttctctgggctcccgtattcgtcctctgagtttttttctagagtcc 227

                   
Query: 525 tatattcg 532
           ||||||||
Sbjct: 226 tatattcg 219



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 679 tctcatattcctcttctgagtcttccgctcgagtcctata 718
           |||||||||| || |||||||||||| |||||||||||||
Sbjct: 97  tctcatattcgtcctctgagtcttcctctcgagtcctata 58



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 328 ctctgggctctcgtattcgtcctctgagt 356
           |||||||||| ||||||||||||||||||
Sbjct: 270 ctctgggctcccgtattcgtcctctgagt 242



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 416 ccatattcgtcttctgagtcttcttctaaagttccatattcgtc 459
           |||||||| |||||||||||||| |||| ||| | |||||||||
Sbjct: 362 ccatattcttcttctgagtcttcctctagagtcctatattcgtc 319



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 564 tcccatattcgttttctagggtttcatattcg 595
           |||||||||| | |||||||||||||||||||
Sbjct: 208 tcccatattcatcttctagggtttcatattcg 177



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 356 tcttcttctgagtcttcctcta 377
           ||||||||||||||||||||||
Sbjct: 356 tcttcttctgagtcttcctcta 335



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                      
Query: 626 tcttctanggtttcatattcgtcctct 652
           ||||||| ||||||||||||| |||||
Sbjct: 197 tcttctagggtttcatattcgycctct 171



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 428 tctgagtcttcttctaaagttccatattc 456
           |||||||||||||| ||||| ||||||||
Sbjct: 416 tctgagtcttcttcgaaagtcccatattc 388



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 596 tattcgtcttctaggattccatatt 620
           |||||||||||||||||| ||||||
Sbjct: 326 tattcgtcttctaggatttcatatt 302



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 596 tattcgtcttctaggattccatatt 620
           |||||||||||||||||| ||||||
Sbjct: 161 tattcgtcttctaggatttcatatt 137



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 523 cctatattcgttctctgggttcccatatt 551
           ||||||||||||||||||| || ||||||
Sbjct: 117 cctatattcgttctctgggctctcatatt 89



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 419 tattcgtcttctgagtcttc 438
           ||||||||||||||||||||
Sbjct: 437 tattcgtcttctgagtcttc 418



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 568 atattcgttttctagggtttcatattcg 595
           |||||||| ||||||| |||||||||||
Sbjct: 327 atattcgtcttctaggatttcatattcg 300



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 568 atattcgttttctagggtttcatattcg 595
           |||||||| ||||||| |||||||||||
Sbjct: 162 atattcgtcttctaggatttcatattcg 135
to top
>gb|DQ069546.1| Yucca schidigera RNA polymerase beta'' chain (rpoC2) gene, partial
            cds; chloroplast
          Length = 4152

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                
Query: 255  tttggtattttagactaaattcttttgttcctcgatgctcaatcaaaccctc 306
            ||||||||||  ||||||||||||||| |||||||| |||||||||| ||||
Sbjct: 1975 tttggtatttcggactaaattcttttgctcctcgatactcaatcaaatcctc 1924



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                   
Query: 29   atatcttatctgcctcttcaggaaaatgaatatctccggaaaatattttgagttc 83
            |||||||||||| |||| | ||||||||||||||||| ||||| ||||| |||||
Sbjct: 2206 atatcttatctgtctctccgggaaaatgaatatctccagaaaagattttcagttc 2152



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 147  gagttgtgtatccactccaataatactattgt 178
            |||||||||||| |||||||| ||||||||||
Sbjct: 2082 gagttgtgtatctactccaatgatactattgt 2051
to top
>gb|AF372172.1| Digitaria violascens DNA-directed RNA polymerase beta' subunit 2
           (rpoC2) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 388

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 62/71 (87%), Gaps = 1/71 (1%)
 Strand = Plus / Minus

                                                                       
Query: 648 cctctcgggtcctgtattccgtgttctanggtctcatattcctcttctgagtcttccgct 707
           ||||||||||||| ||||| || ||||  | |||||||||| || |||||||||||| ||
Sbjct: 127 cctctcgggtcctatattc-gttttctgggctctcatattcgtcctctgagtcttcctct 69

                      
Query: 708 cgagtcctata 718
           |||||||||||
Sbjct: 68  cgagtcctata 58



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 489 tcccatattcctcttctgagtctttctctaaagtcctatatt 530
           |||||||||| ||||||||||||| ||||| ||||||| |||
Sbjct: 352 tcccatattcttcttctgagtcttcctctaragtcctawatt 311



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                           
Query: 329 tctgggctctcgtattcgtcctctgagtcttc 360
           ||||||||||| ||||||||||||||||||||
Sbjct: 104 tctgggctctcatattcgtcctctgagtcttc 73



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                       
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattcctcttctgagtctttctcta 518
           ||||| |||||||||||| | | |||||| || ||||||| || |||||||||| |||| 
Sbjct: 127 cctctcgggtcctatattcgttttctgggctctcatattcgtcctctgagtcttcctctc 68

                     
Query: 519 aagtcctata 528
            |||||||||
Sbjct: 67  gagtcctata 58



 Score = 48.1 bits (24), Expect = 0.041
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 356 tcttcttctgagtcttcctctaaagt 381
           |||||||||||||||||||||| |||
Sbjct: 344 tcttcttctgagtcttcctctaragt 319



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 34/39 (87%)
 Strand = Plus / Minus

                                                  
Query: 682 catattcctcttctgagtcttccgctcgagtcctatatt 720
           ||||||| ||||||||||||||| ||  ||||||| |||
Sbjct: 349 catattcttcttctgagtcttcctctaragtcctawatt 311



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 521 gtcctatattcgttctctgggttcccatatt 551
           ||||||||||||||||||||| |||| ||||
Sbjct: 272 gtcctatattcgttctctgggctcccgtatt 242



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 416 ccatattcgtcttctgagtcttcttctaaagt 447
           |||||||| |||||||||||||| |||| |||
Sbjct: 350 ccatattcttcttctgagtcttcctctaragt 319



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                      
Query: 626 tcttctanggtttcatattcgtcctct 652
           ||||||| ||||||||||||| |||||
Sbjct: 197 tcttctagggtttcatattcgycctct 171



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 567 catattcgttttctagggtttcatattcg 595
           ||||||| | |||||||||||||||||||
Sbjct: 205 catattcatcttctagggtttcatattcg 177



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 547 atatttgttttctgggctcccatattcgt 575
           ||||| ||||||||||||| |||||||||
Sbjct: 114 atattcgttttctgggctctcatattcgt 86



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 459 cctcttgggtcctatatttgctctctgggttcccatattc 498
           ||||| |||||||||||| | |||||||| |||| |||||
Sbjct: 280 cctctcgggtcctatattcgttctctgggctcccgtattc 241
to top
>gb|AY521596.1| Cucumis sativus isolate GY-14, chloroplast sequence
          Length = 16653

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                   
Query: 29   atatcttatctgcctcttcaggaaaatgaatatctccggaaaatattttgagttc 83
            ||||||||||   |||| |||||||||| |||||||| |||||||||||||||||
Sbjct: 8743 atatcttatccatctctccaggaaaatgtatatctccagaaaatattttgagttc 8797
to top
>gb|DQ069544.1| Ranunculus macranthus RNA polymerase beta'' chain (rpoC2) gene,
            partial cds; chloroplast
          Length = 4128

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                           
Query: 255  tttggtattttagactaaattcttttgttcctcgatgctcaatcaaa 301
            ||||||||||| | |||||||||||||||| ||||| ||||||||||
Sbjct: 1981 tttggtattttggcctaaattcttttgttcttcgatactcaatcaaa 1935
to top
>gb|DQ069541.1| Acorus americanus RNA polymerase beta'' chain (rpoC2) gene, partial
            cds; chloroplast
          Length = 4158

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                   
Query: 29   atatcttatctgcctcttcaggaaaatgaatatctccggaaaatattttgagttc 83
            |||||||||||| |||| |||||||||| |||||||| ||||  |||||||||||
Sbjct: 2206 atatcttatctgtctctccaggaaaatggatatctccagaaacaattttgagttc 2152



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                        
Query: 242  cgatctacttctttttggtattttagactaaattcttttgttcctcgatgctcaatcaaa 301
            ||||||||||   ||||||||||   ||||||||||||||||||||||| |||||| |||
Sbjct: 1994 cgatctactttcatttggtatttcgaactaaattcttttgttcctcgatactcaatgaaa 1935

                 
Query: 302  ccctc 306
             ||||
Sbjct: 1934 tcctc 1930
to top
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA
          Length = 155943

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                    
Query: 29    atatcttatctgcctcttcaggaaaatgaatatctccggaaaatattttgagttc 83
             |||||||||||| |||| |||||||||| |||||||| ||||| ||||| |||||
Sbjct: 19140 atatcttatctgtctctccaggaaaatggatatctccagaaaagattttaagttc 19194
to top
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome
          Length = 155293

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                    
Query: 29    atatcttatctgcctcttcaggaaaatgaatatctccggaaaatattttgagttc 83
             ||||||||||   |||| |||||||||| |||||||| |||||||||||||||||
Sbjct: 19344 atatcttatccatctctccaggaaaatgtatatctccagaaaatattttgagttc 19398
to top
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome
          Length = 153337

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                    
Query: 29    atatcttatctgcctcttcaggaaaatgaatatctccggaaaatattttgagttc 83
             |||||||||||| |||| |||||||||| ||||| || ||||||||||| |||||
Sbjct: 19033 atatcttatctgtctctccaggaaaatggatatccccagaaaatattttcagttc 19087



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                         
Query: 242   cgatctacttctttttggtattttagactaaattcttttgttcctcgatgctcaatcaaa 301
             ||||||||||   ||||||||||| | ||||||||||||| || ||||| ||||||||||
Sbjct: 19245 cgatctactttcatttggtattttggcctaaattcttttgctcttcgatactcaatcaaa 19304

                  
Query: 302   ccctc 306
              ||||
Sbjct: 19305 tcctc 19309
to top
>gb|AY582139.1| Panax ginseng chloroplast, complete genome
          Length = 156318

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                    
Query: 29    atatcttatctgcctcttcaggaaaatgaatatctccggaaaatattttgagttc 83
             |||||||||| | |||| |||||||||| |||||||| ||||||||||| |||||
Sbjct: 19821 atatcttatccgtctctccaggaaaatggatatctccagaaaatattttaagttc 19875



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 66/79 (83%)
 Strand = Plus / Plus

                                                                         
Query: 100   ctcttcactcggaccagtccgcctagtccacttcttgtattttttgtgagttgtgtatcc 159
             |||| ||||||||||| |||||| | ||  ||||||||| ||   |||| ||||||||| 
Sbjct: 19892 ctctccactcggaccaatccgcccactcggcttcttgtagttaaagtgatttgtgtatct 19951

                                
Query: 160   actccaataatactattgt 178
             || ||||||||||||||||
Sbjct: 19952 accccaataatactattgt 19970



 Score = 40.1 bits (20), Expect = 9.9
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                                 
Query: 255   tttggtattttagactaaattcttttgttcctcgatgctcaatcaaaccctc 306
             ||||||||||| | |||||||| ||   |||||||| |||||||||| ||||
Sbjct: 20046 tttggtattttggcctaaattccttgactcctcgatactcaatcaaatcctc 20097
to top
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome
          Length = 155527

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                    
Query: 29    atatcttatctgcctcttcaggaaaatgaatatctccggaaaatattttgagttc 83
             ||||||||||   |||| |||||||||| |||||||| |||||||||||||||||
Sbjct: 19333 atatcttatccatctctccaggaaaatgtatatctccagaaaatattttgagttc 19387
to top
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome
          Length = 153821

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                    
Query: 29    atatcttatctgcctcttcaggaaaatgaatatctccggaaaatattttgagttc 83
             |||||||||||| |||| |||||||||| |||||||| ||||  |||||||||||
Sbjct: 18623 atatcttatctgtctctccaggaaaatggatatctccagaaacaattttgagttc 18677



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                         
Query: 242   cgatctacttctttttggtattttagactaaattcttttgttcctcgatgctcaatcaaa 301
             ||||||||||   ||||||||||   ||||||||||||||||||||||| |||||| |||
Sbjct: 18835 cgatctactttcatttggtatttcgaactaaattcttttgttcctcgatactcaatgaaa 18894

                  
Query: 302   ccctc 306
              ||||
Sbjct: 18895 tcctc 18899
to top
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence
          Length = 155941

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                    
Query: 29    atatcttatctgcctcttcaggaaaatgaatatctccggaaaatattttgagttc 83
             |||||||||||| |||| |||||||||| |||||||| ||||| ||||| |||||
Sbjct: 19138 atatcttatctgtctctccaggaaaatggatatctccagaaaagattttaagttc 19192
to top
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence
          Length = 155745

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                    
Query: 29    atatcttatctgcctcttcaggaaaatgaatatctccggaaaatattttgagttc 83
             |||||||||||| |||| |||||||||| |||||||| ||||| ||||| |||||
Sbjct: 19090 atatcttatctgtctctccaggaaaatggatatctccagaaaagattttaagttc 19144
to top
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome
          Length = 160286

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                    
Query: 29    atatcttatctgcctcttcaggaaaatgaatatctccggaaaatattttgagttc 83
             |||||||||||| |||| |||||||||| |||||||| ||||| ||||| |||||
Sbjct: 19956 atatcttatctgtctctccaggaaaatggatatctccagaaaagattttcagttc 20010
to top
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome
          Length = 151104

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 66/78 (84%)
 Strand = Plus / Minus

                                                                         
Query: 101   tcttcactcggaccagtccgcctagtccacttcttgtattttttgtgagttgtgtatcca 160
             ||||||||||||||| ||| ||||  | ||||||| |||||   |||| ||||||||| |
Sbjct: 21334 tcttcactcggaccaatccacctacccgacttcttctatttaaagtgatttgtgtatcta 21275

                               
Query: 161   ctccaataatactattgt 178
             | ||||||||||||||||
Sbjct: 21274 ccccaataatactattgt 21257
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>emb|AL606652.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0004A17,
             complete sequence
          Length = 159894

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 50/57 (87%), Gaps = 3/57 (5%)
 Strand = Plus / Plus

                                                                      
Query: 596   tattcgtcttctaggattccatatttagattcttctanggtttcatattcgtcctct 652
             |||||||| |||||||||||||||| |   ||||||| |||||||||||||| ||||
Sbjct: 64930 tattcgtcctctaggattccatattca---tcttctagggtttcatattcgttctct 64983



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                           
Query: 546   catatttgttttctgggctcccatattcgttttctagggtttcata 591
             |||||| ||| |||||  |||||||||| |||||||||||||||||
Sbjct: 64970 catattcgttctctggaatcccatattcattttctagggtttcata 65015



 Score = 46.1 bits (23), Expect = 0.16
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 566   ccatattcgttttctagggtttcatattcgt 596
             |||||||| | ||||||||||||||||||||
Sbjct: 64948 ccatattcatcttctagggtttcatattcgt 64978
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>emb|AJ243754.2|SAL243754 Sinapis alba chloroplast rpoB operon (rpoB, rpoC1 and rpoC2 genes)
          Length = 11206

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                   
Query: 29   atatcttatctgcctcttcaggaaaatgaatatctccggaaaatattttgagttc 83
            |||||||||||| ||  || |||||||| ||||| || |||||||||||||||||
Sbjct: 9100 atatcttatctgtcttgtccggaaaatggatatcccctgaaaatattttgagttc 9046
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>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan)
          Length = 156687

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                    
Query: 29    atatcttatctgcctcttcaggaaaatgaatatctccggaaaatattttgagttc 83
             |||||||||||| |||  |||||||||| |||||||| ||||| ||||| |||||
Sbjct: 18902 atatcttatctgtctcgccaggaaaatggatatctccagaaaagattttaagttc 18956



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                         
Query: 242   cgatctacttctttttggtattttagactaaattcttttgttcctcgatgctcaatcaaa 301
             ||||||||||   ||||||||||| | |||||||| ||   |||||||| ||||||||||
Sbjct: 19114 cgatctactttcatttggtattttggcctaaattccttgactcctcgatactcaatcaaa 19173

                  
Query: 302   ccctc 306
              ||||
Sbjct: 19174 tcctc 19178
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>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence
          Length = 153482

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                    
Query: 29    atatcttatctgcctcttcaggaaaatgaatatctccggaaaatattttgagttc 83
             |||||||||||| ||  || |||||||| ||||| || |||||||||||||||||
Sbjct: 17503 atatcttatctgtcttgtccggaaaatggatatcccccgaaaatattttgagttc 17557
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>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome
          Length = 152772

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 65/78 (83%)
 Strand = Plus / Minus

                                                                         
Query: 101   tcttcactcggaccagtccgcctagtccacttcttgtattttttgtgagttgtgtatcca 160
             ||||||||||||||| ||||||||  | ||||||| ||||    |||| |||||||||  
Sbjct: 21274 tcttcactcggaccaatccgcctacccgacttcttctattgaaagtgatttgtgtatctg 21215

                               
Query: 161   ctccaataatactattgt 178
             | ||||||||||||||||
Sbjct: 21214 ccccaataatactattgt 21197


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,770,905
Number of Sequences: 3902068
Number of extensions: 6770905
Number of successful extensions: 145161
Number of sequences better than 10.0: 327
Number of HSP's better than 10.0 without gapping: 334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 137217
Number of HSP's gapped (non-prelim): 6926
length of query: 721
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 698
effective length of database: 17,143,297,704
effective search space: 11966021797392
effective search space used: 11966021797392
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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