ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd16p11 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X13366.1|CHSCPSBD Secale cereale chloroplast psbD, psbC and trnS genes for D2 polypeptide, Chl a-binding protein and tRNA-Ser(uga) Length = 2992 Score = 575 bits (290), Expect = e-161 Identities = 319/326 (97%), Gaps = 2/326 (0%) Strand = Plus / Minus Query: 1 aaaaaagtagnaacaggtataaataagnaaaatcttagttaagagggttcatgtaaagaa 60 |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 2759 aaaaaagtag-aacaggtataaataag-aaaatcttagttaagagggttcatgtaaagaa 2702 Query: 61 caggttccaaatcacgatcgattcccttttcaaaacctgctgcagcagctcgggctcttc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2701 caggttccaaatcacgatcgattcccttttcaaaacctgctgcagcagctcgggctcttc 2642 Query: 121 ctgcatgccataaatggcccacaaaaaagaagaatcctagaacaaaatgagaagttgata 180 |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| Sbjct: 2641 ctgcatgccataaatggcccacaaaagggaagaatcctagaacaaaatgagaagtagata 2582 Query: 181 accaacttctaggagagacataattaactgcattgatctcggtcgctacgccacccacgg 240 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 2581 accaacttctaggagagacataattaactgcattgatctcggtagctacgccacccacgg 2522 Query: 241 aatttaaagagcctaaaggagcgtgggtcatatattctgctgagcgccgttcttgccaag 300 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 2521 aatttaaagagcctaaaggagcgtgggtcatatattctgctgagcgtcgttcttgccaag 2462 Query: 301 gttgtatgtcttttttcaacctactc 326 |||||||||||||||||||||||||| Sbjct: 2461 gttgtatgtcttttttcaacctactc 2436
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 543 bits (274), Expect = e-151 Identities = 315/326 (96%), Gaps = 2/326 (0%) Strand = Plus / Minus Query: 1 aaaaaagtagnaacaggtataaataagnaaaatcttagttaagagggttcatgtaaagaa 60 |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 11457 aaaaaagtag-aacaggtataaataag-aaaatcttagttaagagggttcatgtaaagaa 11400 Query: 61 caggttccaaatcacgatcgattcccttttcaaaacctgctgcagcagctcgggctcttc 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 11399 caggttccaaatcacgatcgattcccttttcaaaacctgctgcagcagcccgggctcttc 11340 Query: 121 ctgcatgccataaatggcccacaaaaaagaagaatcctagaacaaaatgagaagttgata 180 |||||||||| |||||||||||||||||||||||||||||||||||||| |||| | || Sbjct: 11339 ctgcatgccaaaaatggcccacaaaaaagaagaatcctagaacaaaatgggaagacgcta 11280 Query: 181 accaacttctaggagagacataattaactgcattgatctcggtcgctacgccacccacgg 240 |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| Sbjct: 11279 accaacttctaggagaaacataattaactgcattgatctcggtagctacgccacccacgg 11220 Query: 241 aatttaaagagcctaaaggagcgtgggtcatatattctgctgagcgccgttcttgccaag 300 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 11219 aatttaaagagcctaaaggagcgtgggtcatatattctgctgagcgtcgttcttgccaag 11160 Query: 301 gttgtatgtcttttttcaacctactc 326 |||||||||||||||||||||||||| Sbjct: 11159 gttgtatgtcttttttcaacctactc 11134
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 507 bits (256), Expect = e-141 Identities = 301/315 (95%), Gaps = 2/315 (0%) Strand = Plus / Minus Query: 12 aacaggtataaataagnaaaatcttagttaagagggttcatgtaaagaacaggttccaaa 71 ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 11876 aacaggtataaataa--aaaatcttagttaagaggggtcatgtaaagaacaggttccaaa 11819 Query: 72 tcacgatcgattcccttttcaaaacctgctgcagcagctcgggctcttcctgcatgccat 131 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 11818 tcacgatcgattcccttttcaaagcctgctgcagcagctcgggctcttcctgcatgccac 11759 Query: 132 aaatggcccacaaaaaagaagaatcctagaacaaaatgagaagttgataaccaacttcta 191 |||||||||||||||||||||||||||||||||||||| || || | ||||||||||||| Sbjct: 11758 aaatggcccacaaaaaagaagaatcctagaacaaaatgggaggtcgctaaccaacttcta 11699 Query: 192 ggagagacataattaactgcattgatctcggtcgctacgccacccacggaatttaaagag 251 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 11698 ggagagacataattaactgcattgatctcggtagctacgccacccacggaatttaaagag 11639 Query: 252 cctaaaggagcgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtct 311 ||||||||||| |||||||||||||||||||| || ||||||||||||||||| |||||| Sbjct: 11638 cctaaaggagcatgggtcatatattctgctgaacgtcgttcttgccaaggttggatgtct 11579 Query: 312 tttttcaacctactc 326 ||||||||||||||| Sbjct: 11578 tttttcaacctactc 11564
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 500 bits (252), Expect = e-138 Identities = 300/315 (95%), Gaps = 2/315 (0%) Strand = Plus / Minus Query: 12 aacaggtataaataagnaaaatcttagttaagagggttcatgtaaagaacaggttccaaa 71 ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 73503 aacaggtataaataa--aaaatcttagttaagaggggtcatgtaaagaacaggttccaaa 73446 Query: 72 tcacgatcgattcccttttcaaaacctgctgcagcagctcgggctcttcctgcatgccat 131 |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 73445 tcacgatcaattcccttttcaaagcctgctgcagcagctcgggctcttcctgcatgccac 73386 Query: 132 aaatggcccacaaaaaagaagaatcctagaacaaaatgagaagttgataaccaacttcta 191 |||||||||||||||||||||||||||||||||||||| || || | ||||||||||||| Sbjct: 73385 aaatggcccacaaaaaagaagaatcctagaacaaaatgggaggtcgctaaccaacttcta 73326 Query: 192 ggagagacataattaactgcattgatctcggtcgctacgccacccacggaatttaaagag 251 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 73325 ggagagacataattaactgcattgatctcggtagctacgccacccacggaatttaaagag 73266 Query: 252 cctaaaggagcgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtct 311 ||||||||||| |||||||||||||||||||| || ||||||||||||||||| |||||| Sbjct: 73265 cctaaaggagcatgggtcatatattctgctgaacgtcgttcttgccaaggttggatgtct 73206 Query: 312 tttttcaacctactc 326 ||||||||||||||| Sbjct: 73205 tttttcaacctactc 73191
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 490 bits (247), Expect = e-135 Identities = 299/315 (94%), Gaps = 1/315 (0%) Strand = Plus / Minus Query: 12 aacaggtataaataagnaaaatcttagttaagagggttcatgtaaagaacaggttccaaa 71 |||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||| Sbjct: 11354 aacaggtataaataag-aaaatcttagttaagaggggtcatgtaaagaacaggctccaaa 11296 Query: 72 tcacgatcgattcccttttcaaaacctgctgcagcagctcgggctcttcctgcatgccat 131 ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 11295 tcacgatcgattcccttttcaaatcctgctgcagcagcccgggctcttcctgcatgccac 11236 Query: 132 aaatggcccacaaaaaagaagaatcctagaacaaaatgagaagttgataaccaacttcta 191 |||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||| Sbjct: 11235 aaatggcccacaaaaaagaagaatcctagaacaaaatgggaagtcgctaaccaacttcta 11176 Query: 192 ggagagacataattaactgcattgatctcggtcgctacgccacccacggaatttaaagag 251 ||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 11175 ggagaaacataattaactgcattgatctcggtagctacgccacccacagaatttaaagag 11116 Query: 252 cctaaaggagcgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtct 311 ||||||||||| ||||||||||||||||| || || |||||||||||||||||||||||| Sbjct: 11115 cctaaaggagcatgggtcatatattctgccgaacgtcgttcttgccaaggttgtatgtct 11056 Query: 312 tttttcaacctactc 326 ||||||||||||||| Sbjct: 11055 tttttcaacctactc 11041
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 490 bits (247), Expect = e-135 Identities = 299/315 (94%), Gaps = 1/315 (0%) Strand = Plus / Minus Query: 12 aacaggtataaataagnaaaatcttagttaagagggttcatgtaaagaacaggttccaaa 71 |||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||| Sbjct: 11354 aacaggtataaataag-aaaatcttagttaagaggggtcatgtaaagaacaggctccaaa 11296 Query: 72 tcacgatcgattcccttttcaaaacctgctgcagcagctcgggctcttcctgcatgccat 131 ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 11295 tcacgatcgattcccttttcaaatcctgctgcagcagcccgggctcttcctgcatgccac 11236 Query: 132 aaatggcccacaaaaaagaagaatcctagaacaaaatgagaagttgataaccaacttcta 191 |||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||| Sbjct: 11235 aaatggcccacaaaaaagaagaatcctagaacaaaatgggaagtcgctaaccaacttcta 11176 Query: 192 ggagagacataattaactgcattgatctcggtcgctacgccacccacggaatttaaagag 251 ||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 11175 ggagaaacataattaactgcattgatctcggtagctacgccacccacagaatttaaagag 11116 Query: 252 cctaaaggagcgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtct 311 ||||||||||| ||||||||||||||||| || || |||||||||||||||||||||||| Sbjct: 11115 cctaaaggagcatgggtcatatattctgccgaacgtcgttcttgccaaggttgtatgtct 11056 Query: 312 tttttcaacctactc 326 ||||||||||||||| Sbjct: 11055 tttttcaacctactc 11041
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 490 bits (247), Expect = e-135 Identities = 299/315 (94%), Gaps = 1/315 (0%) Strand = Plus / Minus Query: 12 aacaggtataaataagnaaaatcttagttaagagggttcatgtaaagaacaggttccaaa 71 |||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||| Sbjct: 11291 aacaggtataaataag-aaaatcttagttaagaggggtcatgtaaagaacaggctccaaa 11233 Query: 72 tcacgatcgattcccttttcaaaacctgctgcagcagctcgggctcttcctgcatgccat 131 ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 11232 tcacgatcgattcccttttcaaatcctgctgcagcagcccgggctcttcctgcatgccac 11173 Query: 132 aaatggcccacaaaaaagaagaatcctagaacaaaatgagaagttgataaccaacttcta 191 |||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||| Sbjct: 11172 aaatggcccacaaaaaagaagaatcctagaacaaaatgggaagtcgctaaccaacttcta 11113 Query: 192 ggagagacataattaactgcattgatctcggtcgctacgccacccacggaatttaaagag 251 ||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 11112 ggagaaacataattaactgcattgatctcggtagctacgccacccacagaatttaaagag 11053 Query: 252 cctaaaggagcgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtct 311 ||||||||||| ||||||||||||||||| || || |||||||||||||||||||||||| Sbjct: 11052 cctaaaggagcatgggtcatatattctgccgaacgtcgttcttgccaaggttgtatgtct 10993 Query: 312 tttttcaacctactc 326 ||||||||||||||| Sbjct: 10992 tttttcaacctactc 10978
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 490 bits (247), Expect = e-135 Identities = 299/315 (94%), Gaps = 1/315 (0%) Strand = Plus / Minus Query: 12 aacaggtataaataagnaaaatcttagttaagagggttcatgtaaagaacaggttccaaa 71 |||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||| Sbjct: 11352 aacaggtataaataag-aaaatcttagttaagaggggtcatgtaaagaacaggctccaaa 11294 Query: 72 tcacgatcgattcccttttcaaaacctgctgcagcagctcgggctcttcctgcatgccat 131 ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 11293 tcacgatcgattcccttttcaaatcctgctgcagcagcccgggctcttcctgcatgccac 11234 Query: 132 aaatggcccacaaaaaagaagaatcctagaacaaaatgagaagttgataaccaacttcta 191 |||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||| Sbjct: 11233 aaatggcccacaaaaaagaagaatcctagaacaaaatgggaagtcgctaaccaacttcta 11174 Query: 192 ggagagacataattaactgcattgatctcggtcgctacgccacccacggaatttaaagag 251 ||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 11173 ggagaaacataattaactgcattgatctcggtagctacgccacccacagaatttaaagag 11114 Query: 252 cctaaaggagcgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtct 311 ||||||||||| ||||||||||||||||| || || |||||||||||||||||||||||| Sbjct: 11113 cctaaaggagcatgggtcatatattctgccgaacgtcgttcttgccaaggttgtatgtct 11054 Query: 312 tttttcaacctactc 326 ||||||||||||||| Sbjct: 11053 tttttcaacctactc 11039
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 490 bits (247), Expect = e-135 Identities = 299/315 (94%), Gaps = 1/315 (0%) Strand = Plus / Minus Query: 12 aacaggtataaataagnaaaatcttagttaagagggttcatgtaaagaacaggttccaaa 71 |||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||| Sbjct: 94701 aacaggtataaataag-aaaatcttagttaagaggggtcatgtaaagaacaggctccaaa 94643 Query: 72 tcacgatcgattcccttttcaaaacctgctgcagcagctcgggctcttcctgcatgccat 131 ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 94642 tcacgatcgattcccttttcaaatcctgctgcagcagcccgggctcttcctgcatgccac 94583 Query: 132 aaatggcccacaaaaaagaagaatcctagaacaaaatgagaagttgataaccaacttcta 191 |||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||| Sbjct: 94582 aaatggcccacaaaaaagaagaatcctagaacaaaatgggaagtcgctaaccaacttcta 94523 Query: 192 ggagagacataattaactgcattgatctcggtcgctacgccacccacggaatttaaagag 251 ||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 94522 ggagaaacataattaactgcattgatctcggtagctacgccacccacagaatttaaagag 94463 Query: 252 cctaaaggagcgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtct 311 ||||||||||| ||||||||||||||||| || || |||||||||||||||||||||||| Sbjct: 94462 cctaaaggagcatgggtcatatattctgccgaacgtcgttcttgccaaggttgtatgtct 94403 Query: 312 tttttcaacctactc 326 ||||||||||||||| Sbjct: 94402 tttttcaacctactc 94388
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 490 bits (247), Expect = e-135 Identities = 299/315 (94%), Gaps = 1/315 (0%) Strand = Plus / Minus Query: 12 aacaggtataaataagnaaaatcttagttaagagggttcatgtaaagaacaggttccaaa 71 |||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||| Sbjct: 9240580 aacaggtataaataag-aaaatcttagttaagaggggtcatgtaaagaacaggctccaaa 9240522 Query: 72 tcacgatcgattcccttttcaaaacctgctgcagcagctcgggctcttcctgcatgccat 131 ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 9240521 tcacgatcgattcccttttcaaatcctgctgcagcagcccgggctcttcctgcatgccac 9240462 Query: 132 aaatggcccacaaaaaagaagaatcctagaacaaaatgagaagttgataaccaacttcta 191 |||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||| Sbjct: 9240461 aaatggcccacaaaaaagaagaatcctagaacaaaatgggaagtcgctaaccaacttcta 9240402 Query: 192 ggagagacataattaactgcattgatctcggtcgctacgccacccacggaatttaaagag 251 ||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 9240401 ggagaaacataattaactgcattgatctcggtagctacgccacccacagaatttaaagag 9240342 Query: 252 cctaaaggagcgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtct 311 ||||||||||| ||||||||||||||||| || || |||||||||||||||||||||||| Sbjct: 9240341 cctaaaggagcatgggtcatatattctgccgaacgtcgttcttgccaaggttgtatgtct 9240282 Query: 312 tttttcaacctactc 326 ||||||||||||||| Sbjct: 9240281 tttttcaacctactc 9240267 Score = 490 bits (247), Expect = e-135 Identities = 299/315 (94%), Gaps = 1/315 (0%) Strand = Plus / Minus Query: 12 aacaggtataaataagnaaaatcttagttaagagggttcatgtaaagaacaggttccaaa 71 |||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||| Sbjct: 9136675 aacaggtataaataag-aaaatcttagttaagaggggtcatgtaaagaacaggctccaaa 9136617 Query: 72 tcacgatcgattcccttttcaaaacctgctgcagcagctcgggctcttcctgcatgccat 131 ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 9136616 tcacgatcgattcccttttcaaatcctgctgcagcagcccgggctcttcctgcatgccac 9136557 Query: 132 aaatggcccacaaaaaagaagaatcctagaacaaaatgagaagttgataaccaacttcta 191 |||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||| Sbjct: 9136556 aaatggcccacaaaaaagaagaatcctagaacaaaatgggaagtcgctaaccaacttcta 9136497 Query: 192 ggagagacataattaactgcattgatctcggtcgctacgccacccacggaatttaaagag 251 ||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 9136496 ggagaaacataattaactgcattgatctcggtagctacgccacccacagaatttaaagag 9136437 Query: 252 cctaaaggagcgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtct 311 ||||||||||| ||||||||||||||||| || || |||||||||||||||||||||||| Sbjct: 9136436 cctaaaggagcatgggtcatatattctgccgaacgtcgttcttgccaaggttgtatgtct 9136377 Query: 312 tttttcaacctactc 326 ||||||||||||||| Sbjct: 9136376 tttttcaacctactc 9136362
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 490 bits (247), Expect = e-135 Identities = 299/315 (94%), Gaps = 1/315 (0%) Strand = Plus / Plus Query: 12 aacaggtataaataagnaaaatcttagttaagagggttcatgtaaagaacaggttccaaa 71 |||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||| Sbjct: 14384966 aacaggtataaataag-aaaatcttagttaagaggggtcatgtaaagaacaggctccaaa 14385024 Query: 72 tcacgatcgattcccttttcaaaacctgctgcagcagctcgggctcttcctgcatgccat 131 ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 14385025 tcacgatcgattcccttttcaaatcctgctgcagcagcccgggctcttcctgcatgccac 14385084 Query: 132 aaatggcccacaaaaaagaagaatcctagaacaaaatgagaagttgataaccaacttcta 191 |||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||| Sbjct: 14385085 aaatggcccacaaaaaagaagaatcctagaacaaaatgggaagtcgctaaccaacttcta 14385144 Query: 192 ggagagacataattaactgcattgatctcggtcgctacgccacccacggaatttaaagag 251 ||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 14385145 ggagaaacataattaactgcattgatctcggtagctacgccacccacagaatttaaagag 14385204 Query: 252 cctaaaggagcgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtct 311 ||||||||||| ||||||||||||||||| || || |||||||||||||||||||||||| Sbjct: 14385205 cctaaaggagcatgggtcatatattctgccgaacgtcgttcttgccaaggttgtatgtct 14385264 Query: 312 tttttcaacctactc 326 ||||||||||||||| Sbjct: 14385265 tttttcaacctactc 14385279 Score = 46.1 bits (23), Expect = 0.070 Identities = 29/31 (93%) Strand = Plus / Plus Query: 144 aaaaagaagaatcctagaacaaaatgagaag 174 ||||| |||||||||||||||||||| |||| Sbjct: 17793811 aaaaaaaagaatcctagaacaaaatgggaag 17793841
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 490 bits (247), Expect = e-135 Identities = 299/315 (94%), Gaps = 1/315 (0%) Strand = Plus / Minus Query: 12 aacaggtataaataagnaaaatcttagttaagagggttcatgtaaagaacaggttccaaa 71 |||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||| Sbjct: 33563369 aacaggtataaataag-aaaatcttagttaagaggggtcatgtaaagaacaggctccaaa 33563311 Query: 72 tcacgatcgattcccttttcaaaacctgctgcagcagctcgggctcttcctgcatgccat 131 ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 33563310 tcacgatcgattcccttttcaaatcctgctgcagcagcccgggctcttcctgcatgccac 33563251 Query: 132 aaatggcccacaaaaaagaagaatcctagaacaaaatgagaagttgataaccaacttcta 191 |||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||| Sbjct: 33563250 aaatggcccacaaaaaagaagaatcctagaacaaaatgggaagtcgctaaccaacttcta 33563191 Query: 192 ggagagacataattaactgcattgatctcggtcgctacgccacccacggaatttaaagag 251 ||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 33563190 ggagaaacataattaactgcattgatctcggtagctacgccacccacagaatttaaagag 33563131 Query: 252 cctaaaggagcgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtct 311 ||||||||||| ||||||||||||||||| || || |||||||||||||||||||||||| Sbjct: 33563130 cctaaaggagcatgggtcatatattctgccgaacgtcgttcttgccaaggttgtatgtct 33563071 Query: 312 tttttcaacctactc 326 ||||||||||||||| Sbjct: 33563070 tttttcaacctactc 33563056
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 490 bits (247), Expect = e-135 Identities = 299/315 (94%), Gaps = 1/315 (0%) Strand = Plus / Minus Query: 12 aacaggtataaataagnaaaatcttagttaagagggttcatgtaaagaacaggttccaaa 71 |||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||| Sbjct: 108566 aacaggtataaataag-aaaatcttagttaagaggggtcatgtaaagaacaggctccaaa 108508 Query: 72 tcacgatcgattcccttttcaaaacctgctgcagcagctcgggctcttcctgcatgccat 131 ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 108507 tcacgatcgattcccttttcaaatcctgctgcagcagcccgggctcttcctgcatgccac 108448 Query: 132 aaatggcccacaaaaaagaagaatcctagaacaaaatgagaagttgataaccaacttcta 191 |||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||| Sbjct: 108447 aaatggcccacaaaaaagaagaatcctagaacaaaatgggaagtcgctaaccaacttcta 108388 Query: 192 ggagagacataattaactgcattgatctcggtcgctacgccacccacggaatttaaagag 251 ||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 108387 ggagaaacataattaactgcattgatctcggtagctacgccacccacagaatttaaagag 108328 Query: 252 cctaaaggagcgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtct 311 ||||||||||| ||||||||||||||||| || || |||||||||||||||||||||||| Sbjct: 108327 cctaaaggagcatgggtcatatattctgccgaacgtcgttcttgccaaggttgtatgtct 108268 Query: 312 tttttcaacctactc 326 ||||||||||||||| Sbjct: 108267 tttttcaacctactc 108253
>dbj|AP005408.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0022A24 Length = 148347 Score = 490 bits (247), Expect = e-135 Identities = 299/315 (94%), Gaps = 1/315 (0%) Strand = Plus / Plus Query: 12 aacaggtataaataagnaaaatcttagttaagagggttcatgtaaagaacaggttccaaa 71 |||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||| Sbjct: 106888 aacaggtataaataag-aaaatcttagttaagaggggtcatgtaaagaacaggctccaaa 106946 Query: 72 tcacgatcgattcccttttcaaaacctgctgcagcagctcgggctcttcctgcatgccat 131 ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 106947 tcacgatcgattcccttttcaaatcctgctgcagcagcccgggctcttcctgcatgccac 107006 Query: 132 aaatggcccacaaaaaagaagaatcctagaacaaaatgagaagttgataaccaacttcta 191 |||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||| Sbjct: 107007 aaatggcccacaaaaaagaagaatcctagaacaaaatgggaagtcgctaaccaacttcta 107066 Query: 192 ggagagacataattaactgcattgatctcggtcgctacgccacccacggaatttaaagag 251 ||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 107067 ggagaaacataattaactgcattgatctcggtagctacgccacccacagaatttaaagag 107126 Query: 252 cctaaaggagcgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtct 311 ||||||||||| ||||||||||||||||| || || |||||||||||||||||||||||| Sbjct: 107127 cctaaaggagcatgggtcatatattctgccgaacgtcgttcttgccaaggttgtatgtct 107186 Query: 312 tttttcaacctactc 326 ||||||||||||||| Sbjct: 107187 tttttcaacctactc 107201
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 490 bits (247), Expect = e-135 Identities = 299/315 (94%), Gaps = 1/315 (0%) Strand = Plus / Minus Query: 12 aacaggtataaataagnaaaatcttagttaagagggttcatgtaaagaacaggttccaaa 71 |||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||| Sbjct: 11289 aacaggtataaataag-aaaatcttagttaagaggggtcatgtaaagaacaggctccaaa 11231 Query: 72 tcacgatcgattcccttttcaaaacctgctgcagcagctcgggctcttcctgcatgccat 131 ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 11230 tcacgatcgattcccttttcaaatcctgctgcagcagcccgggctcttcctgcatgccac 11171 Query: 132 aaatggcccacaaaaaagaagaatcctagaacaaaatgagaagttgataaccaacttcta 191 |||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||| Sbjct: 11170 aaatggcccacaaaaaagaagaatcctagaacaaaatgggaagtcgctaaccaacttcta 11111 Query: 192 ggagagacataattaactgcattgatctcggtcgctacgccacccacggaatttaaagag 251 ||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 11110 ggagaaacataattaactgcattgatctcggtagctacgccacccacagaatttaaagag 11051 Query: 252 cctaaaggagcgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtct 311 ||||||||||| ||||||||||||||||| || || |||||||||||||||||||||||| Sbjct: 11050 cctaaaggagcatgggtcatatattctgccgaacgtcgttcttgccaaggttgtatgtct 10991 Query: 312 tttttcaacctactc 326 ||||||||||||||| Sbjct: 10990 tttttcaacctactc 10976
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 482 bits (243), Expect = e-133 Identities = 298/315 (94%), Gaps = 1/315 (0%) Strand = Plus / Minus Query: 12 aacaggtataaataagnaaaatcttagttaagagggttcatgtaaagaacaggttccaaa 71 |||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||| Sbjct: 142382 aacaggtataaataag-aaaatcttagttaagaggggtcatgtaaagaacaggctccaaa 142324 Query: 72 tcacgatcgattcccttttcaaaacctgctgcagcagctcgggctcttcctgcatgccat 131 ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 142323 tcacgatcgattcccttttcaaatcctgctgcagcagcccgggctcttcctgcatgccac 142264 Query: 132 aaatggcccacaaaaaagaagaatcctagaacaaaatgagaagttgataaccaacttcta 191 |||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||| Sbjct: 142263 aaatggcccacaaaaaagaagaatcctagaacaaaatgggaagtcgctaaccaacttcta 142204 Query: 192 ggagagacataattaactgcattgatctcggtcgctacgccacccacggaatttaaagag 251 ||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||| Sbjct: 142203 ggagaaacataattaactgcattgatctcggtacctacgccacccacagaatttaaagag 142144 Query: 252 cctaaaggagcgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtct 311 ||||||||||| |||||||||||||||||||| | |||||||||||||||||||||||| Sbjct: 142143 cctaaaggagcatgggtcatatattctgctgaatgtcgttcttgccaaggttgtatgtct 142084 Query: 312 tttttcaacctactc 326 ||||||||||||||| Sbjct: 142083 tttttcaacctactc 142069
>gb|AC130726.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0508G08, complete sequence Length = 141383 Score = 482 bits (243), Expect = e-133 Identities = 298/315 (94%), Gaps = 1/315 (0%) Strand = Plus / Minus Query: 12 aacaggtataaataagnaaaatcttagttaagagggttcatgtaaagaacaggttccaaa 71 |||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||| Sbjct: 5469 aacaggtataaataag-aaaatcttagttaagaggggtcatgtaaagaacaggctccaaa 5411 Query: 72 tcacgatcgattcccttttcaaaacctgctgcagcagctcgggctcttcctgcatgccat 131 ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 5410 tcacgatcgattcccttttcaaatcctgctgcagcagcccgggctcttcctgcatgccac 5351 Query: 132 aaatggcccacaaaaaagaagaatcctagaacaaaatgagaagttgataaccaacttcta 191 |||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||| Sbjct: 5350 aaatggcccacaaaaaagaagaatcctagaacaaaatgggaagtcgctaaccaacttcta 5291 Query: 192 ggagagacataattaactgcattgatctcggtcgctacgccacccacggaatttaaagag 251 ||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||| Sbjct: 5290 ggagaaacataattaactgcattgatctcggtacctacgccacccacagaatttaaagag 5231 Query: 252 cctaaaggagcgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtct 311 ||||||||||| |||||||||||||||||||| | |||||||||||||||||||||||| Sbjct: 5230 cctaaaggagcatgggtcatatattctgctgaatgtcgttcttgccaaggttgtatgtct 5171 Query: 312 tttttcaacctactc 326 ||||||||||||||| Sbjct: 5170 tttttcaacctactc 5156
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 482 bits (243), Expect = e-133 Identities = 298/315 (94%), Gaps = 1/315 (0%) Strand = Plus / Minus Query: 12 aacaggtataaataagnaaaatcttagttaagagggttcatgtaaagaacaggttccaaa 71 |||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||| Sbjct: 12844923 aacaggtataaataag-aaaatcttagttaagaggggtcatgtaaagaacaggctccaaa 12844865 Query: 72 tcacgatcgattcccttttcaaaacctgctgcagcagctcgggctcttcctgcatgccat 131 ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 12844864 tcacgatcgattcccttttcaaatcctgctgcagcagcccgggctcttcctgcatgccac 12844805 Query: 132 aaatggcccacaaaaaagaagaatcctagaacaaaatgagaagttgataaccaacttcta 191 |||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||| Sbjct: 12844804 aaatggcccacaaaaaagaagaatcctagaacaaaatgggaagtcgctaaccaacttcta 12844745 Query: 192 ggagagacataattaactgcattgatctcggtcgctacgccacccacggaatttaaagag 251 ||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||| Sbjct: 12844744 ggagaaacataattaactgcattgatctcggtacctacgccacccacagaatttaaagag 12844685 Query: 252 cctaaaggagcgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtct 311 ||||||||||| |||||||||||||||||||| | |||||||||||||||||||||||| Sbjct: 12844684 cctaaaggagcatgggtcatatattctgctgaatgtcgttcttgccaaggttgtatgtct 12844625 Query: 312 tttttcaacctactc 326 ||||||||||||||| Sbjct: 12844624 tttttcaacctactc 12844610
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 476 bits (240), Expect = e-131 Identities = 297/315 (94%), Gaps = 2/315 (0%) Strand = Plus / Minus Query: 12 aacaggtataaataagnaaaatcttagttaagagggttcatgtaaagaacaggttccaaa 71 ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 11528 aacaggtataaataa--aaaatcttagttaagaggggtcatgtaaagaacaggttccaaa 11471 Query: 72 tcacgatcgattcccttttcaaaacctgctgcagcagctcgggctcttcctgcatgccat 131 || ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 11470 tcgcgatcaattcccttttcaaagcctgctgcagcagctcgggctcttcctgcatgccac 11411 Query: 132 aaatggcccacaaaaaagaagaatcctagaacaaaatgagaagttgataaccaacttcta 191 |||||||||||||||||||||||||||||||||||||| || || | ||||||||||||| Sbjct: 11410 aaatggcccacaaaaaagaagaatcctagaacaaaatgggaggtcgctaaccaacttcta 11351 Query: 192 ggagagacataattaactgcattgatctcggtcgctacgccacccacggaatttaaagag 251 || |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 11350 ggggagacataattaacagcattgatctcggtagctacgccacccacggaatttaaagag 11291 Query: 252 cctaaaggagcgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtct 311 ||||||||||| |||||||||||||||||||| || ||||||||||||||||| |||||| Sbjct: 11290 cctaaaggagcatgggtcatatattctgctgaacgtcgttcttgccaaggttggatgtct 11231 Query: 312 tttttcaacctactc 326 ||||||||||||||| Sbjct: 11230 tttttcaacctactc 11216
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 474 bits (239), Expect = e-131 Identities = 297/315 (94%), Gaps = 1/315 (0%) Strand = Plus / Minus Query: 12 aacaggtataaataagnaaaatcttagttaagagggttcatgtaaagaacaggttccaaa 71 |||||||||||||||| ||||||||||||||| ||| |||||||||||||||| |||||| Sbjct: 9576 aacaggtataaataag-aaaatcttagttaagtggggtcatgtaaagaacaggctccaaa 9518 Query: 72 tcacgatcgattcccttttcaaaacctgctgcagcagctcgggctcttcctgcatgccat 131 ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 9517 tcacgatcgattcccttttcaaatcctgctgcagcagcccgggctcttcctgcatgccac 9458 Query: 132 aaatggcccacaaaaaagaagaatcctagaacaaaatgagaagttgataaccaacttcta 191 |||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||| Sbjct: 9457 aaatggcccacaaaaaagaagaatcctagaacaaaatgggaagtcgctaaccaacttcta 9398 Query: 192 ggagagacataattaactgcattgatctcggtcgctacgccacccacggaatttaaagag 251 ||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 9397 ggagaaacataattaactgcattgatctcggtagctacgccacccacagaatttaaagag 9338 Query: 252 cctaaaggagcgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtct 311 ||||||||||| ||||||||||||||||| || | |||||||||||||||||||||||| Sbjct: 9337 cctaaaggagcatgggtcatatattctgccgaatgtcgttcttgccaaggttgtatgtct 9278 Query: 312 tttttcaacctactc 326 ||||||||||||||| Sbjct: 9277 tttttcaacctactc 9263
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 474 bits (239), Expect = e-131 Identities = 297/315 (94%), Gaps = 1/315 (0%) Strand = Plus / Minus Query: 12 aacaggtataaataagnaaaatcttagttaagagggttcatgtaaagaacaggttccaaa 71 |||||||||||||||| ||||||||||||||| ||| |||||||||||||||| |||||| Sbjct: 84509 aacaggtataaataag-aaaatcttagttaagtggggtcatgtaaagaacaggctccaaa 84451 Query: 72 tcacgatcgattcccttttcaaaacctgctgcagcagctcgggctcttcctgcatgccat 131 ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 84450 tcacgatcgattcccttttcaaatcctgctgcagcagcccgggctcttcctgcatgccac 84391 Query: 132 aaatggcccacaaaaaagaagaatcctagaacaaaatgagaagttgataaccaacttcta 191 |||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||| Sbjct: 84390 aaatggcccacaaaaaagaagaatcctagaacaaaatgggaagtcgctaaccaacttcta 84331 Query: 192 ggagagacataattaactgcattgatctcggtcgctacgccacccacggaatttaaagag 251 ||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 84330 ggagaaacataattaactgcattgatctcggtagctacgccacccacagaatttaaagag 84271 Query: 252 cctaaaggagcgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtct 311 ||||||||||| ||||||||||||||||| || | |||||||||||||||||||||||| Sbjct: 84270 cctaaaggagcatgggtcatatattctgccgaatgtcgttcttgccaaggttgtatgtct 84211 Query: 312 tttttcaacctactc 326 ||||||||||||||| Sbjct: 84210 tttttcaacctactc 84196
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 474 bits (239), Expect = e-131 Identities = 297/315 (94%), Gaps = 1/315 (0%) Strand = Plus / Minus Query: 12 aacaggtataaataagnaaaatcttagttaagagggttcatgtaaagaacaggttccaaa 71 |||||||||||||||| ||||||||||||||| ||| |||||||||||||||| |||||| Sbjct: 10303184 aacaggtataaataag-aaaatcttagttaagtggggtcatgtaaagaacaggctccaaa 10303126 Query: 72 tcacgatcgattcccttttcaaaacctgctgcagcagctcgggctcttcctgcatgccat 131 ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 10303125 tcacgatcgattcccttttcaaatcctgctgcagcagcccgggctcttcctgcatgccac 10303066 Query: 132 aaatggcccacaaaaaagaagaatcctagaacaaaatgagaagttgataaccaacttcta 191 |||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||| Sbjct: 10303065 aaatggcccacaaaaaagaagaatcctagaacaaaatgggaagtcgctaaccaacttcta 10303006 Query: 192 ggagagacataattaactgcattgatctcggtcgctacgccacccacggaatttaaagag 251 ||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 10303005 ggagaaacataattaactgcattgatctcggtagctacgccacccacagaatttaaagag 10302946 Query: 252 cctaaaggagcgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtct 311 ||||||||||| ||||||||||||||||| || | |||||||||||||||||||||||| Sbjct: 10302945 cctaaaggagcatgggtcatatattctgccgaatgtcgttcttgccaaggttgtatgtct 10302886 Query: 312 tttttcaacctactc 326 ||||||||||||||| Sbjct: 10302885 tttttcaacctactc 10302871 Score = 184 bits (93), Expect = 1e-43 Identities = 121/129 (93%), Gaps = 1/129 (0%) Strand = Plus / Plus Query: 198 acataattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaa 257 |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 21925375 acataattaactgcattgatctcggtagctacgccacccacagaatttaaagagcctaa- 21925433 Query: 258 ggagcgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttc 317 ||||| ||||||||||||||||| || || ||||||||| |||||||||||||||||||| Sbjct: 21925434 ggagcatgggtcatatattctgccgaacgtcgttcttgctaaggttgtatgtcttttttc 21925493 Query: 318 aacctactc 326 ||||||||| Sbjct: 21925494 aacctactc 21925502
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 474 bits (239), Expect = e-131 Identities = 297/315 (94%), Gaps = 1/315 (0%) Strand = Plus / Minus Query: 12 aacaggtataaataagnaaaatcttagttaagagggttcatgtaaagaacaggttccaaa 71 |||||||||||||||| ||||||||||||||| ||| |||||||||||||||| |||||| Sbjct: 10309223 aacaggtataaataag-aaaatcttagttaagtggggtcatgtaaagaacaggctccaaa 10309165 Query: 72 tcacgatcgattcccttttcaaaacctgctgcagcagctcgggctcttcctgcatgccat 131 ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 10309164 tcacgatcgattcccttttcaaatcctgctgcagcagcccgggctcttcctgcatgccac 10309105 Query: 132 aaatggcccacaaaaaagaagaatcctagaacaaaatgagaagttgataaccaacttcta 191 |||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||| Sbjct: 10309104 aaatggcccacaaaaaagaagaatcctagaacaaaatgggaagtcgctaaccaacttcta 10309045 Query: 192 ggagagacataattaactgcattgatctcggtcgctacgccacccacggaatttaaagag 251 ||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 10309044 ggagaaacataattaactgcattgatctcggtagctacgccacccacagaatttaaagag 10308985 Query: 252 cctaaaggagcgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtct 311 ||||||||||| ||||||||||||||||| || | |||||||||||||||||||||||| Sbjct: 10308984 cctaaaggagcatgggtcatatattctgccgaatgtcgttcttgccaaggttgtatgtct 10308925 Query: 312 tttttcaacctactc 326 ||||||||||||||| Sbjct: 10308924 tttttcaacctactc 10308910 Score = 184 bits (93), Expect = 1e-43 Identities = 121/129 (93%), Gaps = 1/129 (0%) Strand = Plus / Plus Query: 198 acataattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaa 257 |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 21937038 acataattaactgcattgatctcggtagctacgccacccacagaatttaaagagcctaa- 21937096 Query: 258 ggagcgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttc 317 ||||| ||||||||||||||||| || || ||||||||| |||||||||||||||||||| Sbjct: 21937097 ggagcatgggtcatatattctgccgaacgtcgttcttgctaaggttgtatgtcttttttc 21937156 Query: 318 aacctactc 326 ||||||||| Sbjct: 21937157 aacctactc 21937165
>ref|XM_465411.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1422 Score = 460 bits (232), Expect = e-126 Identities = 277/292 (94%) Strand = Plus / Minus Query: 35 ttagttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaa 94 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1422 ttagttaagaggggtcatgtaaagaacaggctccaaatcacgatcgattcccttttcaaa 1363 Query: 95 acctgctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaa 154 |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1362 tcctgctgcagcagcccgggctcttcctgcatgccacaaatggcccacaaaaaagaagaa 1303 Query: 155 tcctagaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcatt 214 ||||||||||||||| ||||| | |||||||||||||||||| ||||||||||||||||| Sbjct: 1302 tcctagaacaaaatgggaagtcgctaaccaacttctaggagaaacataattaactgcatt 1243 Query: 215 gatctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatata 274 ||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 1242 gatctcggtagctacgccacccacagaatttaaagagcctaaaggagcatgggtcatata 1183 Query: 275 ttctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 |||||| || || ||||||||||||||||||||||||||||||||||||||| Sbjct: 1182 ttctgccgaacgtcgttcttgccaaggttgtatgtcttttttcaacctactc 1131
>ref|NM_195972.1| Oryza sativa (japonica cultivar-group) putative PSII 43kDa protein from chromosome 10 chloroplast insertion (OSJNBb0075K12.22), mRNA Length = 1422 Score = 444 bits (224), Expect = e-122 Identities = 275/292 (94%) Strand = Plus / Minus Query: 35 ttagttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaa 94 ||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1422 ttagttaagtggggtcatgtaaagaacaggctccaaatcacgatcgattcccttttcaaa 1363 Query: 95 acctgctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaa 154 |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1362 tcctgctgcagcagcccgggctcttcctgcatgccacaaatggcccacaaaaaagaagaa 1303 Query: 155 tcctagaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcatt 214 ||||||||||||||| ||||| | |||||||||||||||||| ||||||||||||||||| Sbjct: 1302 tcctagaacaaaatgggaagtcgctaaccaacttctaggagaaacataattaactgcatt 1243 Query: 215 gatctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatata 274 ||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 1242 gatctcggtagctacgccacccacagaatttaaagagcctaaaggagcatgggtcatata 1183 Query: 275 ttctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 |||||| || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 1182 ttctgccgaatgtcgttcttgccaaggttgtatgtcttttttcaacctactc 1131
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 436 bits (220), Expect = e-119 Identities = 292/315 (92%), Gaps = 2/315 (0%) Strand = Plus / Minus Query: 12 aacaggtataaataagnaaaatcttagttaagagggttcatgtaaagaacaggttccaaa 71 ||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 11534 aacaggtataaataa--aaaatcttagttaagaggggtcatgtaaacaacaggttccaaa 11477 Query: 72 tcacgatcgattcccttttcaaaacctgctgcagcagctcgggctcttcctgcatgccat 131 || ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 11476 tcgcgatcaattcccttttcaaagcctgctgcagcagctcgggctcttcctgcatgccac 11417 Query: 132 aaatggcccacaaaaaagaagaatcctagaacaaaatgagaagttgataaccaacttcta 191 |||||||||||||||||||||||||||||||||||||| || || | ||||||||||||| Sbjct: 11416 aaatggcccacaaaaaagaagaatcctagaacaaaatgggaggtcgctaaccaacttcta 11357 Query: 192 ggagagacataattaactgcattgatctcggtcgctacgccacccacggaatttaaagag 251 || |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 11356 ggggagacataattaacagcattgatctcggtagctacgccacccacggaatttaaagag 11297 Query: 252 cctaaaggagcgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtct 311 ||||||||||| ||||||||||||||| |||| || ||||||||||||||||| |||| Sbjct: 11296 cctaaaggagcatgggtcatatattctcctgaacgtcgttcttgccaaggttggccgtct 11237 Query: 312 tttttcaacctactc 326 || |||||||||||| Sbjct: 11236 ttcttcaacctactc 11222
>gb|DQ069647.1| Typha latifolia photosystem II 44 kDa protein (psbC) gene, partial cds; chloroplast Length = 1419 Score = 375 bits (189), Expect = e-101 Identities = 264/289 (91%) Strand = Plus / Minus Query: 38 gttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacc 97 |||||||||| ||||| ||||||||||||||||||| ||||||||||| |||||||| || Sbjct: 1419 gttaagaggggtcatggaaagaacaggttccaaatcgcgatcgattcctttttcaaaccc 1360 Query: 98 tgctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcc 157 |||||||| || ||||| ||||| |||||||| ||||| |||||||| | ||||||||| Sbjct: 1359 cgctgcagctgcacgggcccttcccgcatgccacaaatgacccacaaataggaagaatcc 1300 Query: 158 tagaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgat 217 ||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 1299 tagaacaaaatgagaggtcgctaaccaacttctaggagagacataattaactgcattgat 1240 Query: 218 ctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattc 277 |||||| |||||||||||||||||||||||||| ||||||||||| || ||||||||||| Sbjct: 1239 ctcggtagctacgccacccacggaatttaaagaacctaaaggagcatgagtcatatattc 1180 Query: 278 tgctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 ||| || || ||||||||||||||||||||||||||||||| ||||||| Sbjct: 1179 tgccgaacgtcgttcttgccaaggttgtatgtcttttttcagcctactc 1131
>gb|DQ069643.1| Acorus americanus photosystem II 44 kDa protein (psbC) gene, partial cds; chloroplast Length = 1383 Score = 373 bits (188), Expect = e-100 Identities = 263/288 (91%) Strand = Plus / Minus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 |||||||| ||||| ||||||||||||| ||||||||||||||||| |||||||| ||| Sbjct: 1382 ttaagaggagtcatggaaagaacaggttctaaatcacgatcgattcctttttcaaatcct 1323 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 ||||| || || |||||||||||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 1322 gctgccgctgcgcgggctcttcctgcgtgccacaaatgacccacaaaaaagaagaatcct 1263 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 ||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||| Sbjct: 1262 agaacaaaatgagaagtagctaaccaacttctaggagagacataattgactgcattgatc 1203 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| ||||| |||||||||||||||||||| ||||||||||| || ||||||||||| Sbjct: 1202 tcggtagctacaccacccacggaatttaaagaccctaaaggagcatgagtcatatattcc 1143 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || || ||||||||||||||||||||||||||||||| ||||||| Sbjct: 1142 gccgaacgtcgttcttgccaaggttgtatgtcttttttcagcctactc 1095
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 373 bits (188), Expect = e-100 Identities = 263/288 (91%) Strand = Plus / Minus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 |||||||| ||||| ||||||||||||| ||||||||||||||||| |||||||| ||| Sbjct: 35745 ttaagaggagtcatggaaagaacaggttctaaatcacgatcgattcctttttcaaatcct 35686 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 ||||| || || |||||||||||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 35685 gctgccgctgcgcgggctcttcctgcgtgccacaaatgacccacaaaaaagaagaatcct 35626 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 ||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||| Sbjct: 35625 agaacaaaatgagaagtagctaaccaacttctaggagagacataattgactgcattgatc 35566 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| ||||| |||||||||||||||||||| ||||||||||| || ||||||||||| Sbjct: 35565 tcggtagctacaccacccacggaatttaaagaccctaaaggagcatgagtcatatattcc 35506 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || || ||||||||||||||||||||||||||||||| ||||||| Sbjct: 35505 gccgaacgtcgttcttgccaaggttgtatgtcttttttcagcctactc 35458
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 365 bits (184), Expect = 6e-98 Identities = 256/280 (91%) Strand = Plus / Minus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 ||||||||| ||||| ||||||||||||| ||||||||||| ||||| |||||||| ||| Sbjct: 34883 ttaagaggggtcatggaaagaacaggttcaaaatcacgatcaattcctttttcaaatcct 34824 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || ||||||||||| ||||| ||||| || || || |||||||||||| Sbjct: 34823 gctgcagctgcacgagctcttcctgcgtgccacaaatgccctacgaagaagaagaatcct 34764 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 ||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||| Sbjct: 34763 agaacaaaatgagaagtagctaaccaacttctaggagagacataattgactgcattgatc 34704 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 34703 tcggtagctacgccacccacggaatttaaagaacctaaaggagcatgggtcatatattct 34644 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttca 318 || || || ||||||||||||||||||||||||||||||| Sbjct: 34643 gcggaacgacgttcttgccaaggttgtatgtcttttttca 34604
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 365 bits (184), Expect = 6e-98 Identities = 256/280 (91%) Strand = Plus / Minus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 ||||||||| ||||| ||||||||||||| ||||||||||| ||||| |||||||| ||| Sbjct: 34882 ttaagaggggtcatggaaagaacaggttcaaaatcacgatcaattcctttttcaaatcct 34823 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || ||||||||||| ||||| ||||| || || || |||||||||||| Sbjct: 34822 gctgcagctgcacgagctcttcctgcgtgccacaaatgccctacgaagaagaagaatcct 34763 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 ||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||| Sbjct: 34762 agaacaaaatgagaagtagctaaccaacttctaggagagacataattgactgcattgatc 34703 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 34702 tcggtagctacgccacccacggaatttaaagaacctaaaggagcatgggtcatatattct 34643 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttca 318 || || || ||||||||||||||||||||||||||||||| Sbjct: 34642 gcggaacgacgttcttgccaaggttgtatgtcttttttca 34603
>gb|DQ069648.1| Yucca schidigera photosystem II 44 kDa protein (psbC) gene, partial cds; chloroplast Length = 1419 Score = 363 bits (183), Expect = 2e-97 Identities = 261/287 (90%) Strand = Plus / Minus Query: 40 taagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacctg 99 |||||||| ||||| ||||||| ||||||||||||||||||||||| |||||||| |||| Sbjct: 1417 taagaggggtcatggaaagaacgggttccaaatcacgatcgattcctttttcaaatcctg 1358 Query: 100 ctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatccta 159 | ||||| || |||||||||||||||||||| ||||| |||||||| | ||||||||||| Sbjct: 1357 cagcagctgcacgggctcttcctgcatgccacaaatgacccacaaataggaagaatccta 1298 Query: 160 gaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatct 219 |||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1297 gaacaaaatgagaagtggctaaccaacttctaggagagacataattgactgcattgatct 1238 Query: 220 cggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattctg 279 |||| ||||||||||| || ||||||||||| ||||||||||| || ||||||||||||| Sbjct: 1237 cggtagctacgccacctaccgaatttaaagaacctaaaggagcatgagtcatatattctg 1178 Query: 280 ctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 | || || |||||||||||||||||||| |||||||||| ||||||| Sbjct: 1177 ccgaacgtcgttcttgccaaggttgtatatcttttttcagcctactc 1131
>gb|AY363057.1|AY363056S2 Spiranthes romanzoffiana PsbC (psbC) gene, partial cds; and psbC-trnS intergenic spacer, partial sequence; chloroplast Length = 642 Score = 361 bits (182), Expect = 9e-97 Identities = 263/290 (90%) Strand = Plus / Minus Query: 29 aaaatcttagttaagagggttcatgtaaagaacaggttccaaatcacgatcgattccctt 88 ||||||| || |||||||| ||||| ||||||||||||||||||||||||| ||||| || Sbjct: 517 aaaatctcagctaagaggggtcatggaaagaacaggttccaaatcacgatcaattccttt 458 Query: 89 ttcaaaacctgctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaa 148 |||||| || |||||||| || || || ||||| |||||||| ||||| |||||||| || Sbjct: 457 ttcaaatcccgctgcagctgcgcgtgcccttcccgcatgccacaaatgtcccacaaataa 398 Query: 149 gaagaatcctagaacaaaatgagaagttgataaccaacttctaggagagacataattaac 208 ||| ||||||| |||||||||||| || | |||||||||||||||||||||||||||||| Sbjct: 397 gaaaaatcctaaaacaaaatgagaggtagctaaccaacttctaggagagacataattaac 338 Query: 209 tgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggt 268 ||||||||||||||| |||||||| ||||| ||||||||||||||||||||||| ||||| Sbjct: 337 tgcattgatctcggtagctacgccccccacagaatttaaagagcctaaaggagcatgggt 278 Query: 269 catatattctgctgagcgccgttcttgccaaggttgtatgtcttttttca 318 |||||||||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 277 catatattctgccgagcgtcgttcttgccaaggttgtatgtcttttttca 228
>gb|AY450953.1| Panax ginseng photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, complete cds; chloroplast Length = 2431 Score = 357 bits (180), Expect = 1e-95 Identities = 261/288 (90%) Strand = Plus / Minus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 ||||||||| ||||| ||||||||||||| ||||||||||| ||||| |||||||| ||| Sbjct: 2427 ttaagaggggtcatggaaagaacaggttcaaaatcacgatcaattcctttttcaaaccct 2368 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || || ||||| || ||||| ||||| || || || |||||||||||| Sbjct: 2367 gctgcagctgcacgagcccttcccgcgtgccacaaatgacctacgaacaagaagaatcct 2308 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 ||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||| Sbjct: 2307 agaacaaaatgagaagtagctaaccaacttctaggagagacataattgactgcattgatc 2248 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| |||||||||||||| ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 2247 tcggtagctacgccacccacagaatttaaagaacctaaaggagcatgggtcatatattct 2188 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 2187 gcagaacgccgttcttgccaaggttgtatgtcttttttcagcctactc 2140
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 357 bits (180), Expect = 1e-95 Identities = 261/288 (90%) Strand = Plus / Minus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 |||||||| ||||| ||||||||||||| ||||| |||||||| || |||||||||||| Sbjct: 38785 ttaagaggagtcatgaaaagaacaggttcaaaatcgcgatcgatccctttttcaaaacct 38726 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || ||||| ||||| |||||||| ||||| ||||||||||||||||||||| Sbjct: 38725 gctgcagctgcacgggcccttcccgcatgccacaaatgacccacaaaaaagaagaatcct 38666 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 |||||||||||||| || | ||||||||||||||||||||||||||| |||||||||||| Sbjct: 38665 agaacaaaatgagaggtagctaaccaacttctaggagagacataattgactgcattgatc 38606 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 || || ||||| |||||||||||||||||||| ||||||||||| || ||||||||||| Sbjct: 38605 tctgtagctacaccacccacggaatttaaagaacctaaaggagcatgagtcatatattcc 38546 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || || ||||||||||||||||||||||||||||||||||||||| Sbjct: 38545 gccgaacgtcgttcttgccaaggttgtatgtcttttttcaacctactc 38498
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 357 bits (180), Expect = 1e-95 Identities = 261/288 (90%) Strand = Plus / Minus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 ||||||||| ||||| ||||||||||||| ||||||||||| ||||| |||||||| ||| Sbjct: 37301 ttaagaggggtcatggaaagaacaggttcaaaatcacgatcaattcctttttcaaaccct 37242 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || || ||||| || ||||| ||||| || || || |||||||||||| Sbjct: 37241 gctgcagctgcacgagcccttcccgcgtgccacaaatgacctacgaacaagaagaatcct 37182 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 ||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||| Sbjct: 37181 agaacaaaatgagaagtagctaaccaacttctaggagagacataattgactgcattgatc 37122 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| |||||||||||||| ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 37121 tcggtagctacgccacccacagaatttaaagaacctaaaggagcatgggtcatatattct 37062 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 37061 gcagaacgccgttcttgccaaggttgtatgtcttttttcagcctactc 37014
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 353 bits (178), Expect = 2e-94 Identities = 262/290 (90%) Strand = Plus / Minus Query: 37 agttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaac 96 ||||||||||| ||||| ||||||||||||| ||||||||||||||||| |||||||| | Sbjct: 36447 agttaagaggggtcatggaaagaacaggttcaaaatcacgatcgattcctttttcaaatc 36388 Query: 97 ctgctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatc 156 | |||||||| || || || ||||| |||||||| ||||||||||| || | |||||||| Sbjct: 36387 cggctgcagccgcacgagcccttcccgcatgccacaaatggcccacgaataggaagaatc 36328 Query: 157 ctagaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattga 216 |||||||||||||||| || | ||||||||||||||||||||||||||| || ||||||| Sbjct: 36327 ctagaacaaaatgagaggtagctaaccaacttctaggagagacataattgaccgcattga 36268 Query: 217 tctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatatt 276 ||||||| |||||||||||||||||||||||||| ||||||||||| || |||||||||| Sbjct: 36267 tctcggtagctacgccacccacggaatttaaagaacctaaaggagcatgagtcatatatt 36208 Query: 277 ctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 | || || || ||||||||||||||||||||||||||||||||||||||| Sbjct: 36207 ccgcggaacgtcgttcttgccaaggttgtatgtcttttttcaacctactc 36158
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 347 bits (175), Expect = 1e-92 Identities = 259/287 (90%) Strand = Plus / Minus Query: 40 taagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacctg 99 |||||||| ||||| ||||||||||||||||||||||||||||||| |||||||| || | Sbjct: 36852 taagaggggtcatggaaagaacaggttccaaatcacgatcgattcctttttcaaaccccg 36793 Query: 100 ctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatccta 159 ||||||| || || || ||||| |||||||| ||||| |||||||| | ||| ||||||| Sbjct: 36792 ctgcagctgcacgtgcccttcccgcatgccacaaatgtcccacaaataggaaaaatccta 36733 Query: 160 gaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatct 219 ||||||||||||| || | ||||||||||||||||||||||||||| ||||||||||||| Sbjct: 36732 gaacaaaatgagaggtagctaaccaacttctaggagagacataattgactgcattgatct 36673 Query: 220 cggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattctg 279 |||| |||||||||||||||||||||||||| || |||||||| || ||||||||||||| Sbjct: 36672 cggtagctacgccacccacggaatttaaagaacccaaaggagcatgagtcatatattctg 36613 Query: 280 ctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 | || || ||||||||||||||||||||||||||||||| ||||||| Sbjct: 36612 ccgaacgtcgttcttgccaaggttgtatgtcttttttcagcctactc 36566
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 345 bits (174), Expect = 5e-92 Identities = 261/290 (90%) Strand = Plus / Minus Query: 37 agttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaac 96 ||||||||||| |||| ||||||||||||| ||||||||||| ||||| |||||||| | Sbjct: 38532 agttaagaggggtcatagaaagaacaggttcaaaatcacgatcaattcctttttcaaatc 38473 Query: 97 ctgctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatc 156 |||||||||| || || || ||||| || ||||| ||||| || || || | |||||||| Sbjct: 38472 ctgctgcagctgcacgagcccttcccgcgtgccacaaatgacctacgaataggaagaatc 38413 Query: 157 ctagaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattga 216 ||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||| Sbjct: 38412 ctagaacaaaatgagaagtagctaaccaacttctaggagagacataattgactgcattga 38353 Query: 217 tctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatatt 276 ||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 38352 tctcggtagctacgccacccacggaatttaaagaacctaaaggagcgtgagtcatatatt 38293 Query: 277 ctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 | || || |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 38292 ccgcggaacgccgttcttgccaaggttgtatgtcttttttcagcctactc 38243
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 341 bits (172), Expect = 9e-91 Identities = 253/280 (90%) Strand = Plus / Minus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 ||||||||| ||||| ||||||||||||| ||||||||||| ||||| |||||||| ||| Sbjct: 34922 ttaagaggggtcatggaaagaacaggttcaaaatcacgatcaattcctttttcaaatcct 34863 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || ||||||||||| ||||| ||||| || || || |||||||||||| Sbjct: 34862 gctgcagctgcacgagctcttcctgcgtgccacaaatgtcctacgaagaagaagaatcct 34803 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 ||||||||||||||||| | |||||||||||||||||| |||||||| |||||||||||| Sbjct: 34802 agaacaaaatgagaagtagctaaccaacttctaggagacacataattgactgcattgatc 34743 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| ||||| |||||||||||||||||||| ||||||||||| || |||||||||||| Sbjct: 34742 tcggtagctactccacccacggaatttaaagaacctaaaggagcatgagtcatatattct 34683 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttca 318 || || || ||||||||||||||||||||||||||||||| Sbjct: 34682 gcggaacgacgttcttgccaaggttgtatgtcttttttca 34643
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 341 bits (172), Expect = 9e-91 Identities = 259/288 (89%) Strand = Plus / Minus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 ||||||||| ||||| ||||||||||||| || |||||||| ||||| |||||||| ||| Sbjct: 36153 ttaagaggggtcatgaaaagaacaggttcaaagtcacgatcaattcctttttcaaatcct 36094 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || || |||||||| ||||| ||||| || ||||| |||||||||||| Sbjct: 36093 gctgcagctgcacgagcccttcctgcgtgccacaaatgacctacaaagaagaagaatcct 36034 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 |||||||||||||| || | ||||||||||||||||||||||||||| |||||||||||| Sbjct: 36033 agaacaaaatgagaggtagctaaccaacttctaggagagacataattgactgcattgatc 35974 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| ||||| |||||||||||||||||||| ||||||||||| || ||||||||||| Sbjct: 35973 tcggtagctacaccacccacggaatttaaagaacctaaaggagcatgagtcatatattcc 35914 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 35913 gcggaacgccgttcctgccaaggttgtatgtcttttttcaacctactc 35866
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 341 bits (172), Expect = 9e-91 Identities = 259/288 (89%) Strand = Plus / Minus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 ||||||||| ||||| ||||||||||||| || |||||||| ||||| |||||||| ||| Sbjct: 36036 ttaagaggggtcatggaaagaacaggttcaaagtcacgatcaattcctttttcaaatcct 35977 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || || |||||||| ||||| ||||| || ||||| |||||||||||| Sbjct: 35976 gctgcagctgcacgagcccttcctgcgtgccacaaatgacctacaaagaagaagaatcct 35917 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 |||||||||||||| || | ||||||||||||||||||||||||||| |||||||||||| Sbjct: 35916 agaacaaaatgagaggtagctaaccaacttctaggagagacataattgactgcattgatc 35857 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| ||||| |||||||||||||||||||| ||||||||||| || ||||||||||| Sbjct: 35856 tcggtagctacaccacccacggaatttaaagaacctaaaggagcatgagtcatatattcc 35797 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 35796 gcggaacgccgttcctgccaaggttgtatgtcttttttcaacctactc 35749
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 341 bits (172), Expect = 9e-91 Identities = 259/288 (89%) Strand = Plus / Minus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 ||||||||| ||||| ||||||||||||| || |||||||| ||||| |||||||| ||| Sbjct: 36157 ttaagaggggtcatgaaaagaacaggttcaaagtcacgatcaattcctttttcaaatcct 36098 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || || |||||||| ||||| ||||| || ||||| |||||||||||| Sbjct: 36097 gctgcagctgcacgagcccttcctgcgtgccacaaatgacctacaaagaagaagaatcct 36038 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 |||||||||||||| || | ||||||||||||||||||||||||||| |||||||||||| Sbjct: 36037 agaacaaaatgagaggtagctaaccaacttctaggagagacataattgactgcattgatc 35978 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| ||||| |||||||||||||||||||| ||||||||||| || ||||||||||| Sbjct: 35977 tcggtagctacaccacccacggaatttaaagaacctaaaggagcatgagtcatatattcc 35918 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 35917 gcggaacgccgttcctgccaaggttgtatgtcttttttcaacctactc 35870
>gb|AY741479.1| Camellia sinensis cultivar Taiwan Sun Cha photosystem II CP43 protein (psbC) gene, partial cds; chloroplast Length = 1520 Score = 333 bits (168), Expect = 2e-88 Identities = 258/288 (89%) Strand = Plus / Minus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 |||| |||| ||||| ||||||||||||| ||||||||||| ||||| |||||||| ||| Sbjct: 1297 ttaaaaggggtcatggaaagaacaggttcaaaatcacgatcaattcctttttcaaatcct 1238 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || || ||||| || ||||| ||||| || || || ||||||||| || Sbjct: 1237 gctgcagctgcacgagcccttcccgcgtgccacaaatgacctacgaataagaagaatgct 1178 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 |||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1177 agaacaaaatgagaggtagataaccaacttctaggagagacataattgactgcattgatc 1118 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| |||||||| ||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 1117 tcggtagctacgccccccacggaatttaaagaacctaaaggagcatgggtcatatattct 1058 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || ||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 1057 gcggaacgccgttcttgccaaggttgtatatcttttttcagcctactc 1010
>gb|AY741478.1| Camellia sinensis var. assamica cultivar Shan photosystem II CP43 protein (psbC) gene, partial cds; chloroplast Length = 1521 Score = 333 bits (168), Expect = 2e-88 Identities = 258/288 (89%) Strand = Plus / Minus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 |||| |||| ||||| ||||||||||||| ||||||||||| ||||| |||||||| ||| Sbjct: 1297 ttaaaaggggtcatggaaagaacaggttcaaaatcacgatcaattcctttttcaaatcct 1238 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || || ||||| || ||||| ||||| || || || ||||||||| || Sbjct: 1237 gctgcagctgcacgagcccttcccgcgtgccacaaatgacctacgaataagaagaatgct 1178 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 |||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1177 agaacaaaatgagaggtagataaccaacttctaggagagacataattgactgcattgatc 1118 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| |||||||| ||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 1117 tcggtagctacgccccccacggaatttaaagaacctaaaggagcatgggtcatatattct 1058 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || ||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 1057 gcggaacgccgttcttgccaaggttgtatatcttttttcagcctactc 1010
>gb|AY741477.1| Camellia sinensis var. assamica cultivar TTES No. 18 photosystem II CP43 protein (psbC) gene, partial cds; chloroplast Length = 1521 Score = 333 bits (168), Expect = 2e-88 Identities = 258/288 (89%) Strand = Plus / Minus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 |||| |||| ||||| ||||||||||||| ||||||||||| ||||| |||||||| ||| Sbjct: 1297 ttaaaaggggtcatggaaagaacaggttcaaaatcacgatcaattcctttttcaaatcct 1238 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || || ||||| || ||||| ||||| || || || ||||||||| || Sbjct: 1237 gctgcagctgcacgagcccttcccgcgtgccacaaatgacctacgaataagaagaatgct 1178 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 |||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1177 agaacaaaatgagaggtagataaccaacttctaggagagacataattgactgcattgatc 1118 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| |||||||| ||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 1117 tcggtagctacgccccccacggaatttaaagaacctaaaggagcatgggtcatatattct 1058 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || ||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 1057 gcggaacgccgttcttgccaaggttgtatatcttttttcagcctactc 1010
>gb|AY741476.1| Camellia sinensis var. assamica cultivar Burma photosystem II CP43 protein (psbC) gene, partial cds; chloroplast Length = 1521 Score = 333 bits (168), Expect = 2e-88 Identities = 258/288 (89%) Strand = Plus / Minus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 |||| |||| ||||| ||||||||||||| ||||||||||| ||||| |||||||| ||| Sbjct: 1297 ttaaaaggggtcatggaaagaacaggttcaaaatcacgatcaattcctttttcaaatcct 1238 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || || ||||| || ||||| ||||| || || || ||||||||| || Sbjct: 1237 gctgcagctgcacgagcccttcccgcgtgccacaaatgacctacgaataagaagaatgct 1178 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 |||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1177 agaacaaaatgagaggtagataaccaacttctaggagagacataattgactgcattgatc 1118 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| |||||||| ||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 1117 tcggtagctacgccccccacggaatttaaagaacctaaaggagcatgggtcatatattct 1058 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || ||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 1057 gcggaacgccgttcttgccaaggttgtatatcttttttcagcctactc 1010
>gb|AY741475.1| Camellia sinensis cultivar Shiang Yuan photosystem II CP43 protein (psbC) gene, partial cds; chloroplast Length = 1521 Score = 333 bits (168), Expect = 2e-88 Identities = 258/288 (89%) Strand = Plus / Minus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 |||| |||| ||||| ||||||||||||| ||||||||||| ||||| |||||||| ||| Sbjct: 1297 ttaaaaggggtcatggaaagaacaggttcaaaatcacgatcaattcctttttcaaatcct 1238 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || || ||||| || ||||| ||||| || || || ||||||||| || Sbjct: 1237 gctgcagctgcacgagcccttcccgcgtgccacaaatgacctacgaataagaagaatgct 1178 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 |||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1177 agaacaaaatgagaggtagataaccaacttctaggagagacataattgactgcattgatc 1118 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| |||||||| ||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 1117 tcggtagctacgccccccacggaatttaaagaacctaaaggagcatgggtcatatattct 1058 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || ||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 1057 gcggaacgccgttcttgccaaggttgtatatcttttttcagcctactc 1010
>gb|AY741474.1| Camellia sinensis var. sinensis cultivar Shy Jin Chuen photosystem II CP43 protein (psbC) gene, partial cds; chloroplast Length = 1521 Score = 333 bits (168), Expect = 2e-88 Identities = 258/288 (89%) Strand = Plus / Minus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 |||| |||| ||||| ||||||||||||| ||||||||||| ||||| |||||||| ||| Sbjct: 1297 ttaaaaggggtcatggaaagaacaggttcaaaatcacgatcaattcctttttcaaatcct 1238 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || || ||||| || ||||| ||||| || || || ||||||||| || Sbjct: 1237 gctgcagctgcacgagcccttcccgcgtgccacaaatgacctacgaataagaagaatgct 1178 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 |||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1177 agaacaaaatgagaggtagataaccaacttctaggagagacataattgactgcattgatc 1118 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| |||||||| ||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 1117 tcggtagctacgccccccacggaatttaaagaacctaaaggagcatgggtcatatattct 1058 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || ||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 1057 gcggaacgccgttcttgccaaggttgtatatcttttttcagcctactc 1010
>gb|AY741473.1| Camellia sinensis cultivar Gau Lu photosystem II CP43 protein (psbC) gene, partial cds; chloroplast Length = 1521 Score = 333 bits (168), Expect = 2e-88 Identities = 258/288 (89%) Strand = Plus / Minus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 |||| |||| ||||| ||||||||||||| ||||||||||| ||||| |||||||| ||| Sbjct: 1297 ttaaaaggggtcatggaaagaacaggttcaaaatcacgatcaattcctttttcaaatcct 1238 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || || ||||| || ||||| ||||| || || || ||||||||| || Sbjct: 1237 gctgcagctgcacgagcccttcccgcgtgccacaaatgacctacgaataagaagaatgct 1178 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 |||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1177 agaacaaaatgagaggtagataaccaacttctaggagagacataattgactgcattgatc 1118 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| |||||||| ||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 1117 tcggtagctacgccccccacggaatttaaagaacctaaaggagcatgggtcatatattct 1058 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || ||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 1057 gcggaacgccgttcttgccaaggttgtatatcttttttcagcctactc 1010
>gb|AY741472.1| Camellia sinensis var. sinensis cultivar TTES No. 13 photosystem II CP43 protein (psbC) gene, partial cds; chloroplast Length = 1521 Score = 333 bits (168), Expect = 2e-88 Identities = 258/288 (89%) Strand = Plus / Minus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 |||| |||| ||||| ||||||||||||| ||||||||||| ||||| |||||||| ||| Sbjct: 1297 ttaaaaggggtcatggaaagaacaggttcaaaatcacgatcaattcctttttcaaatcct 1238 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || || ||||| || ||||| ||||| || || || ||||||||| || Sbjct: 1237 gctgcagctgcacgagcccttcccgcgtgccacaaatgacctacgaataagaagaatgct 1178 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 |||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1177 agaacaaaatgagaggtagataaccaacttctaggagagacataattgactgcattgatc 1118 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| |||||||| ||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 1117 tcggtagctacgccccccacggaatttaaagaacctaaaggagcatgggtcatatattct 1058 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || ||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 1057 gcggaacgccgttcttgccaaggttgtatatcttttttcagcctactc 1010
>gb|AY741471.1| Camellia sinensis var. sinensis cultivar Chin Shin Dah Pan photosystem II CP43 protein (psbC) gene, partial cds; chloroplast Length = 1521 Score = 333 bits (168), Expect = 2e-88 Identities = 258/288 (89%) Strand = Plus / Minus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 |||| |||| ||||| ||||||||||||| ||||||||||| ||||| |||||||| ||| Sbjct: 1297 ttaaaaggggtcatggaaagaacaggttcaaaatcacgatcaattcctttttcaaatcct 1238 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || || ||||| || ||||| ||||| || || || ||||||||| || Sbjct: 1237 gctgcagctgcacgagcccttcccgcgtgccacaaatgacctacgaataagaagaatgct 1178 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 |||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1177 agaacaaaatgagaggtagataaccaacttctaggagagacataattgactgcattgatc 1118 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| |||||||| ||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 1117 tcggtagctacgccccccacggaatttaaagaacctaaaggagcatgggtcatatattct 1058 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || ||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 1057 gcggaacgccgttcttgccaaggttgtatatcttttttcagcctactc 1010
>gb|AY741470.1| Camellia sinensis var. sinensis cultivar Chin Shin Oolong photosystem II CP43 protein (psbC) gene, partial cds; chloroplast Length = 1521 Score = 333 bits (168), Expect = 2e-88 Identities = 258/288 (89%) Strand = Plus / Minus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 |||| |||| ||||| ||||||||||||| ||||||||||| ||||| |||||||| ||| Sbjct: 1297 ttaaaaggggtcatggaaagaacaggttcaaaatcacgatcaattcctttttcaaatcct 1238 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || || ||||| || ||||| ||||| || || || ||||||||| || Sbjct: 1237 gctgcagctgcacgagcccttcccgcgtgccacaaatgacctacgaataagaagaatgct 1178 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 |||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1177 agaacaaaatgagaggtagataaccaacttctaggagagacataattgactgcattgatc 1118 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| |||||||| ||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 1117 tcggtagctacgccccccacggaatttaaagaacctaaaggagcatgggtcatatattct 1058 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || ||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 1057 gcggaacgccgttcttgccaaggttgtatatcttttttcagcctactc 1010
>gb|AY741469.1| Camellia sinensis var. sinensis cultivar Bair Mau Hour photosystem II CP43 protein (psbC) gene, partial cds; chloroplast Length = 1521 Score = 333 bits (168), Expect = 2e-88 Identities = 258/288 (89%) Strand = Plus / Minus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 |||| |||| ||||| ||||||||||||| ||||||||||| ||||| |||||||| ||| Sbjct: 1297 ttaaaaggggtcatggaaagaacaggttcaaaatcacgatcaattcctttttcaaatcct 1238 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || || ||||| || ||||| ||||| || || || ||||||||| || Sbjct: 1237 gctgcagctgcacgagcccttcccgcgtgccacaaatgacctacgaataagaagaatgct 1178 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 |||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1177 agaacaaaatgagaggtagataaccaacttctaggagagacataattgactgcattgatc 1118 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| |||||||| ||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 1117 tcggtagctacgccccccacggaatttaaagaacctaaaggagcatgggtcatatattct 1058 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || ||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 1057 gcggaacgccgttcttgccaaggttgtatatcttttttcagcctactc 1010
>gb|AY741468.1| Camellia sinensis var. sinensis cultivar Tiee Guan In photosystem II CP43 protein (psbC) gene, partial cds; chloroplast Length = 1521 Score = 333 bits (168), Expect = 2e-88 Identities = 258/288 (89%) Strand = Plus / Minus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 |||| |||| ||||| ||||||||||||| ||||||||||| ||||| |||||||| ||| Sbjct: 1297 ttaaaaggggtcatggaaagaacaggttcaaaatcacgatcaattcctttttcaaatcct 1238 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || || ||||| || ||||| ||||| || || || ||||||||| || Sbjct: 1237 gctgcagctgcacgagcccttcccgcgtgccacaaatgacctacgaataagaagaatgct 1178 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 |||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1177 agaacaaaatgagaggtagataaccaacttctaggagagacataattgactgcattgatc 1118 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| |||||||| ||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 1117 tcggtagctacgccccccacggaatttaaagaacctaaaggagcatgggtcatatattct 1058 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || ||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 1057 gcggaacgccgttcttgccaaggttgtatatcttttttcagcctactc 1010
>gb|AY741467.1| Camellia sinensis var. sinensis cultivar TTES No. 12 photosystem II CP43 protein (psbC) gene, partial cds; chloroplast Length = 1520 Score = 333 bits (168), Expect = 2e-88 Identities = 258/288 (89%) Strand = Plus / Minus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 |||| |||| ||||| ||||||||||||| ||||||||||| ||||| |||||||| ||| Sbjct: 1297 ttaaaaggggtcatggaaagaacaggttcaaaatcacgatcaattcctttttcaaatcct 1238 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || || ||||| || ||||| ||||| || || || ||||||||| || Sbjct: 1237 gctgcagctgcacgagcccttcccgcgtgccacaaatgacctacgaataagaagaatgct 1178 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 |||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1177 agaacaaaatgagaggtagataaccaacttctaggagagacataattgactgcattgatc 1118 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| |||||||| ||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 1117 tcggtagctacgccccccacggaatttaaagaacctaaaggagcatgggtcatatattct 1058 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || ||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 1057 gcggaacgccgttcttgccaaggttgtatatcttttttcagcctactc 1010
>gb|AY741466.1| Camellia tenuifolia cultivar Don San photosystem II CP43 protein (psbC) gene, partial cds; chloroplast Length = 1520 Score = 333 bits (168), Expect = 2e-88 Identities = 258/288 (89%) Strand = Plus / Minus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 |||| |||| ||||| ||||||||||||| ||||||||||| ||||| |||||||| ||| Sbjct: 1297 ttaaaaggggtcatggaaagaacaggttcaaaatcacgatcaattcctttttcaaatcct 1238 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || || ||||| || ||||| ||||| || || || ||||||||| || Sbjct: 1237 gctgcagctgcacgagcccttcccgcgtgccacaaatgacctacgaataagaagaatgct 1178 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 |||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1177 agaacaaaatgagaggtagataaccaacttctaggagagacataattgactgcattgatc 1118 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| |||||||| ||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 1117 tcggtagctacgccccccacggaatttaaagaacctaaaggagcatgggtcatatattct 1058 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || ||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 1057 gcggaacgccgttcttgccaaggttgtatatcttttttcagcctactc 1010
>gb|AY741465.1| Camellia furfuracea cultivar Chyh Ya Sun Cha photosystem II CP43 protein (psbC) gene, partial cds; chloroplast Length = 1520 Score = 333 bits (168), Expect = 2e-88 Identities = 258/288 (89%) Strand = Plus / Minus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 |||| |||| ||||| ||||||||||||| ||||||||||| ||||| |||||||| ||| Sbjct: 1297 ttaaaaggggtcatggaaagaacaggttcaaaatcacgatcaattcctttttcaaatcct 1238 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || || ||||| || ||||| ||||| || || || ||||||||| || Sbjct: 1237 gctgcagctgcacgagcccttcccgcgtgccacaaatgacctacgaataagaagaatgct 1178 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 |||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1177 agaacaaaatgagaggtagataaccaacttctaggagagacataattgactgcattgatc 1118 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| |||||||| ||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 1117 tcggtagctacgccccccacggaatttaaagaacctaaaggagcatgggtcatatattct 1058 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || ||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 1057 gcggaacgccgttcttgccaaggttgtatatcttttttcagcctactc 1010
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 333 bits (168), Expect = 2e-88 Identities = 258/288 (89%) Strand = Plus / Minus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 ||||||||| ||||| ||||||||||||| || |||||||| ||||| |||||||| ||| Sbjct: 36901 ttaagaggggtcatggaaagaacaggttcaaagtcacgatcaattcctttttcaaatcct 36842 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || || ||||| || ||||| ||||| || || || |||||||||||| Sbjct: 36841 gctgcagctgcacgagcccttcccgcgtgccacaaatgacctacgaagaagaagaatcct 36782 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 |||||||||||||| || | ||||||||||||||||||||||||||| |||||||||||| Sbjct: 36781 agaacaaaatgagaggtagctaaccaacttctaggagagacataattgactgcattgatc 36722 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| ||||| |||||||||||||||||||| ||||||||||| || |||||||||||| Sbjct: 36721 tcggtagctacaccacccacggaatttaaagaacctaaaggagcatgagtcatatattct 36662 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 36661 gcggaacgccgttcctgccaaggttgtatgtcttttttcaacctactc 36614
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 333 bits (168), Expect = 2e-88 Identities = 258/288 (89%) Strand = Plus / Minus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 ||||||||| ||||| ||||||||||||| || || ||||| ||||| |||||||| ||| Sbjct: 36011 ttaagaggggtcatggaaagaacaggttcaaagtcgcgatcaattcctttttcaaatcct 35952 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || || |||||||| ||||| ||||| || ||||| |||||||||||| Sbjct: 35951 gctgcagctgcacgagcccttcctgcgtgccacaaatgacctacaaagaagaagaatcct 35892 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 |||||||||||||| || | ||||||||||||||||||||||||||| |||||||||||| Sbjct: 35891 agaacaaaatgagaggtagctaaccaacttctaggagagacataattgactgcattgatc 35832 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| ||||| |||||||||||||||||||| ||||||||||| || ||||||||||| Sbjct: 35831 tcggtagctacaccacccacggaatttaaagaacctaaaggagcatgagtcatatattcc 35772 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 35771 gcggaacgccgttcctgccaaggttgtatgtcttttttcaacctactc 35724
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 333 bits (168), Expect = 2e-88 Identities = 258/288 (89%) Strand = Plus / Minus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 ||||||||| ||||| ||||||||||||| || || ||||| ||||| |||||||| ||| Sbjct: 36008 ttaagaggggtcatggaaagaacaggttcaaagtcgcgatcaattcctttttcaaatcct 35949 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || || |||||||| ||||| ||||| || ||||| |||||||||||| Sbjct: 35948 gctgcagctgcacgagcccttcctgcgtgccacaaatgacctacaaagaagaagaatcct 35889 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 |||||||||||||| || | ||||||||||||||||||||||||||| |||||||||||| Sbjct: 35888 agaacaaaatgagaggtagctaaccaacttctaggagagacataattgactgcattgatc 35829 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| ||||| |||||||||||||||||||| ||||||||||| || ||||||||||| Sbjct: 35828 tcggtagctacaccacccacggaatttaaagaacctaaaggagcatgagtcatatattcc 35769 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 35768 gcggaacgccgttcctgccaaggttgtatgtcttttttcaacctactc 35721
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 333 bits (168), Expect = 2e-88 Identities = 258/288 (89%) Strand = Plus / Minus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 ||||||||| ||||| ||||||||||||| || |||||||| ||||| |||||||| ||| Sbjct: 36898 ttaagaggggtcatggaaagaacaggttcaaagtcacgatcaattcctttttcaaatcct 36839 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || || ||||| || ||||| ||||| || || || |||||||||||| Sbjct: 36838 gctgcagctgcacgagcccttcccgcgtgccacaaatgacctacgaagaagaagaatcct 36779 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 |||||||||||||| || | ||||||||||||||||||||||||||| |||||||||||| Sbjct: 36778 agaacaaaatgagaggtagctaaccaacttctaggagagacataattgactgcattgatc 36719 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| ||||| |||||||||||||||||||| ||||||||||| || |||||||||||| Sbjct: 36718 tcggtagctacaccacccacggaatttaaagaacctaaaggagcatgagtcatatattct 36659 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 36658 gcggaacgccgttcctgccaaggttgtatgtcttttttcaacctactc 36611
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 333 bits (168), Expect = 2e-88 Identities = 258/288 (89%) Strand = Plus / Minus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 ||||||||| ||||| ||||||||||||| || |||||||| ||||| |||||||| ||| Sbjct: 36835 ttaagaggggtcatggaaagaacaggttcaaagtcacgatcaattcctttttcaaatcct 36776 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || || ||||| || ||||| ||||| || || || |||||||||||| Sbjct: 36775 gctgcagctgcacgagcccttcccgcgtgccacaaatgacctacgaagaagaagaatcct 36716 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 |||||||||||||| || | ||||||||||||||||||||||||||| |||||||||||| Sbjct: 36715 agaacaaaatgagaggtagctaaccaacttctaggagagacataattgactgcattgatc 36656 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| ||||| |||||||||||||||||||| ||||||||||| || |||||||||||| Sbjct: 36655 tcggtagctacaccacccacggaatttaaagaacctaaaggagcatgagtcatatattct 36596 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 36595 gcggaacgccgttcctgccaaggttgtatgtcttttttcaacctactc 36548
>gb|AY701779.1| Ipomopsis aggregata PsbC gene, partial cds; and psbC-trnS intergenic spacer, partial sequence; chloroplast Length = 485 Score = 325 bits (164), Expect = 5e-86 Identities = 257/288 (89%) Strand = Plus / Minus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 |||||||| ||||| ||||||||||||| ||||||||||| ||||| |||||||| ||| Sbjct: 430 ttaagaggagtcatggaaagaacaggttcaaaatcacgatcaattcctttttcaaatcct 371 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || || ||||| || ||||| ||||| || || || ||||| || || Sbjct: 370 gctgcagctgcacgagcccttcccgcgtgccacaaatgtcctacgaataagaaaaaggct 311 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 |||||||||||||| || | |||||||||||||||||||||||||||||||||||||||| Sbjct: 310 agaacaaaatgagaggtagctaaccaacttctaggagagacataattaactgcattgatc 251 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| ||||| ||||| |||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 250 tcggtagctacaccacctacggaatttaaagaacctaaaggagcatgggtcatatattct 191 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 190 gcagaacgccgttcttgccaaggttgtatgtcttttttcaacctactc 143
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 317 bits (160), Expect = 1e-83 Identities = 250/280 (89%) Strand = Plus / Minus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 ||||||||| |||| ||||||||||||| ||||||||||| ||||| |||||||| ||| Sbjct: 33933 ttaagaggggtcatcgaaagaacaggttcaaaatcacgatcaattcctttttcaaatcct 33874 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || || ||||| |||||||| ||||| || || || | |||||||||| Sbjct: 33873 gctgcagctgcacgagcccttcccgcatgccacaaatgccctacgaataggaagaatcct 33814 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 33813 agaacaaaatgagaagtagataaccaacttctaggagagacataattgactgcattgatc 33754 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| || || |||||||| ||||||||||| ||||||||||| || |||||||||||| Sbjct: 33753 tcggtagccaccccacccacagaatttaaagaacctaaaggagcatgagtcatatattct 33694 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttca 318 ||||| || |||||||||||||||||||| |||||||||| Sbjct: 33693 gctgaacgtcgttcttgccaaggttgtatatcttttttca 33654
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 317 bits (160), Expect = 1e-83 Identities = 256/288 (88%) Strand = Plus / Minus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 ||||||||| ||||| ||||||||||||| || |||||||| ||||| |||||||| ||| Sbjct: 36651 ttaagaggggtcatggaaagaacaggttcaaagtcacgatcaattcctttttcaaatcct 36592 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || || ||||| || ||||| ||||| || || || |||||||||||| Sbjct: 36591 gctgcagctgcacgagcccttcccgcgtgccacaaatgacctacgaagaagaagaatcct 36532 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 | |||||||||||| || | ||||||||||||||||||||||||||| |||||||||||| Sbjct: 36531 aaaacaaaatgagaggtagctaaccaacttctaggagagacataattgactgcattgatc 36472 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| ||||| |||||||||||||||||||| ||||||||||| || ||||||||||| Sbjct: 36471 tcggtagctacaccacccacggaatttaaagaacctaaaggagcatgagtcatatattcc 36412 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 36411 gcggaacgccgttcctgccaaggttgtatgtcttttttcaacctactc 36364
>dbj|AB206619.1| Pieris floribunda chloroplast DNA, psbC-trnS intergenic spacer Length = 736 Score = 317 bits (160), Expect = 1e-83 Identities = 256/288 (88%) Strand = Plus / Minus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 ||||||||| ||||| ||||||| || || ||||||||||| |||||||||||||| ||| Sbjct: 486 ttaagaggggtcatggaaagaacgggctcaaaatcacgatcaattcccttttcaaatcct 427 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || || ||||| || ||||| ||||| || || || ||||||||| || Sbjct: 426 gctgcagctgcacgagcccttcccgcgtgccacaaatgacctacgaataagaagaatgct 367 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 |||||||||||||| || | ||||||||||||||||||||||||||| |||||||||||| Sbjct: 366 agaacaaaatgagaggtagctaaccaacttctaggagagacataattgactgcattgatc 307 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| |||||||||||||||||||||||||| |||||||| || || |||||||||||| Sbjct: 306 tcggtagctacgccacccacggaatttaaagaacctaaaggcgcatgagtcatatattct 247 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || || ||||||||||||||||||||||| ||||||||||||||| Sbjct: 246 gcggaacgtcgttcttgccaaggttgtatgtcgtttttcaacctactc 199
>dbj|AB206618.1| Pieris phillyreifolia chloroplast DNA, psbC-trnS intergenic spacer Length = 736 Score = 317 bits (160), Expect = 1e-83 Identities = 256/288 (88%) Strand = Plus / Minus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 ||||||||| ||||| ||||||| || || ||||||||||| |||||||||||||| ||| Sbjct: 486 ttaagaggggtcatggaaagaacgggctcaaaatcacgatcaattcccttttcaaatcct 427 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || || ||||| || ||||| ||||| || || || ||||||||| || Sbjct: 426 gctgcagctgcacgagcccttcccgcgtgccacaaatgacctacgaataagaagaatgct 367 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 |||||||||||||| || | ||||||||||||||||||||||||||| |||||||||||| Sbjct: 366 agaacaaaatgagaggtagctaaccaacttctaggagagacataattgactgcattgatc 307 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| |||||||||||||||||||||||||| |||||||| || || |||||||||||| Sbjct: 306 tcggtagctacgccacccacggaatttaaagaacctaaaggcgcatgagtcatatattct 247 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || || ||||||||||||||||||||||| ||||||||||||||| Sbjct: 246 gcggaacgtcgttcttgccaaggttgtatgtcgtttttcaacctactc 199
>dbj|AB206617.1| Pieris formosa chloroplast DNA, psbC-trnS intergenic spacer Length = 736 Score = 317 bits (160), Expect = 1e-83 Identities = 256/288 (88%) Strand = Plus / Minus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 ||||||||| ||||| ||||||| || || ||||||||||| |||||||||||||| ||| Sbjct: 486 ttaagaggggtcatggaaagaacgggctcaaaatcacgatcaattcccttttcaaatcct 427 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || || ||||| || ||||| ||||| || || || ||||||||| || Sbjct: 426 gctgcagctgcacgagcccttcccgcgtgccacaaatgacctacgaataagaagaatgct 367 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 |||||||||||||| || | ||||||||||||||||||||||||||| |||||||||||| Sbjct: 366 agaacaaaatgagaggtagctaaccaacttctaggagagacataattcactgcattgatc 307 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| |||||||||||||||||||||||||| |||||||| || || |||||||||||| Sbjct: 306 tcggtagctacgccacccacggaatttaaagaacctaaaggcgcatgagtcatatattct 247 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || || ||||||||||||||||||||||| ||||||||||||||| Sbjct: 246 gcggaacgtcgttcttgccaaggttgtatgtcgtttttcaacctactc 199
>dbj|AB206615.1| Pieris taiwanensis chloroplast DNA, psbC-trnS intergenic spacer Length = 731 Score = 317 bits (160), Expect = 1e-83 Identities = 256/288 (88%) Strand = Plus / Minus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 ||||||||| ||||| ||||||| || || ||||||||||| |||||||||||||| ||| Sbjct: 486 ttaagaggggtcatggaaagaacgggctcaaaatcacgatcaattcccttttcaaatcct 427 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || || ||||| || ||||| ||||| || || || ||||||||| || Sbjct: 426 gctgcagctgcacgagcccttcccgcgtgccacaaatgacctacgaataagaagaatgct 367 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 |||||||||||||| || | ||||||||||||||||||||||||||| |||||||||||| Sbjct: 366 agaacaaaatgagaggtagctaaccaacttctaggagagacataattgactgcattgatc 307 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| |||||||||||||||||||||||||| |||||||| || || |||||||||||| Sbjct: 306 tcggtagctacgccacccacggaatttaaagaacctaaaggcgcatgagtcatatattct 247 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || || ||||||||||||||||||||||| ||||||||||||||| Sbjct: 246 gcggaacgtcgttcttgccaaggttgtatgtcgtttttcaacctactc 199
>dbj|AB206614.1| Pieris koidzumiana chloroplast DNA, psbC-trnS intergenic spacer, country:Japan:Okinawa, Okinawa Island Length = 731 Score = 317 bits (160), Expect = 1e-83 Identities = 256/288 (88%) Strand = Plus / Minus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 ||||||||| ||||| ||||||| || || ||||||||||| |||||||||||||| ||| Sbjct: 486 ttaagaggggtcatggaaagaacgggctcaaaatcacgatcaattcccttttcaaatcct 427 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || || ||||| || ||||| ||||| || || || ||||||||| || Sbjct: 426 gctgcagctgcacgagcccttcccgcgtgccacaaatgacctacgaataagaagaatgct 367 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 |||||||||||||| || | ||||||||||||||||||||||||||| |||||||||||| Sbjct: 366 agaacaaaatgagaggtagctaaccaacttctaggagagacataattgactgcattgatc 307 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| |||||||||||||||||||||||||| |||||||| || || |||||||||||| Sbjct: 306 tcggtagctacgccacccacggaatttaaagaacctaaaggcgcatgagtcatatattct 247 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || || ||||||||||||||||||||||| ||||||||||||||| Sbjct: 246 gcggaacgtcgttcttgccaaggttgtatgtcgtttttcaacctactc 199
>dbj|AB206613.1| Pieris koidzumiana chloroplast DNA, psbC-trnS intergenic spacer, country:Japan:Kagoshima, Amamioshima Island Length = 731 Score = 317 bits (160), Expect = 1e-83 Identities = 256/288 (88%) Strand = Plus / Minus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 ||||||||| ||||| ||||||| || || ||||||||||| |||||||||||||| ||| Sbjct: 486 ttaagaggggtcatggaaagaacgggctcaaaatcacgatcaattcccttttcaaatcct 427 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || || ||||| || ||||| ||||| || || || ||||||||| || Sbjct: 426 gctgcagctgcacgagcccttcccgcgtgccacaaatgacctacgaataagaagaatgct 367 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 |||||||||||||| || | ||||||||||||||||||||||||||| |||||||||||| Sbjct: 366 agaacaaaatgagaggtagctaaccaacttctaggagagacataattgactgcattgatc 307 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| |||||||||||||||||||||||||| |||||||| || || |||||||||||| Sbjct: 306 tcggtagctacgccacccacggaatttaaagaacctaaaggcgcatgagtcatatattct 247 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || || ||||||||||||||||||||||| ||||||||||||||| Sbjct: 246 gcggaacgtcgttcttgccaaggttgtatgtcgtttttcaacctactc 199
>dbj|AB206612.1| Pieris japonica var. yakushimensis chloroplast DNA, psbC-trnS intergenic spacer Length = 731 Score = 317 bits (160), Expect = 1e-83 Identities = 256/288 (88%) Strand = Plus / Minus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 ||||||||| ||||| ||||||| || || ||||||||||| |||||||||||||| ||| Sbjct: 486 ttaagaggggtcatggaaagaacgggctcaaaatcacgatcaattcccttttcaaatcct 427 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || || ||||| || ||||| ||||| || || || ||||||||| || Sbjct: 426 gctgcagctgcacgagcccttcccgcgtgccacaaatgacctacgaataagaagaatgct 367 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 |||||||||||||| || | ||||||||||||||||||||||||||| |||||||||||| Sbjct: 366 agaacaaaatgagaggtagctaaccaacttctaggagagacataattgactgcattgatc 307 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| |||||||||||||||||||||||||| |||||||| || || |||||||||||| Sbjct: 306 tcggtagctacgccacccacggaatttaaagaacctaaaggcgcatgagtcatatattct 247 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || || ||||||||||||||||||||||| ||||||||||||||| Sbjct: 246 gcggaacgtcgttcttgccaaggttgtatgtcgtttttcaacctactc 199
>dbj|AB206611.1| Pieris japonica chloroplast DNA, psbC-trnS intergenic spacer Length = 731 Score = 317 bits (160), Expect = 1e-83 Identities = 256/288 (88%) Strand = Plus / Minus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 ||||||||| ||||| ||||||| || || ||||||||||| |||||||||||||| ||| Sbjct: 486 ttaagaggggtcatggaaagaacgggctcaaaatcacgatcaattcccttttcaaatcct 427 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || || ||||| || ||||| ||||| || || || ||||||||| || Sbjct: 426 gctgcagctgcacgagcccttcccgcgtgccacaaatgacctacgaataagaagaatgct 367 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 |||||||||||||| || | ||||||||||||||||||||||||||| |||||||||||| Sbjct: 366 agaacaaaatgagaggtagctaaccaacttctaggagagacataattgactgcattgatc 307 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| |||||||||||||||||||||||||| |||||||| || || |||||||||||| Sbjct: 306 tcggtagctacgccacccacggaatttaaagaacctaaaggcgcatgagtcatatattct 247 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || || ||||||||||||||||||||||| ||||||||||||||| Sbjct: 246 gcggaacgtcgttcttgccaaggttgtatgtcgtttttcaacctactc 199
>gb|AY701780.1| Ipomopsis tenuituba PsbC gene, partial cds; and psbC-trnS intergenic spacer, partial sequence; chloroplast Length = 485 Score = 317 bits (160), Expect = 1e-83 Identities = 256/288 (88%) Strand = Plus / Minus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 |||||||| ||||| ||||||||||||| ||||||||||| ||||| |||||||| ||| Sbjct: 430 ttaagaggagtcatggaaagaacaggttcaaaatcacgatcaattcctttttcaaatcct 371 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || || ||||| || ||||| ||||| || || || ||||| || || Sbjct: 370 gctgcagctgcacgagcccttcccgcgtgccacaaatgtcctacgaataagaaaaaggct 311 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 |||||||||||||| || | |||||||||||||||||| ||||||||||||||||||||| Sbjct: 310 agaacaaaatgagaggtagctaaccaacttctaggagaaacataattaactgcattgatc 251 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| ||||| ||||| |||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 250 tcggtagctacaccacctacggaatttaaagaacctaaaggagcatgggtcatatattct 191 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 190 gcagaacgccgttcttgccaaggttgtatgtcttttttcaacctactc 143
>dbj|AB112635.1| Humulus japonicus chloroplast DNA, downstream region of trnS, Japanese wild, Length = 577 Score = 317 bits (160), Expect = 1e-83 Identities = 256/288 (88%) Strand = Plus / Plus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 |||||||| ||||| ||||||||||||| ||||||||||| |||||||||||||| || Sbjct: 194 ttaagaggagtcatgaaaagaacaggttctaaatcacgatcaattcccttttcaaatccc 253 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || || ||||| || ||||||||||| || || || | |||||| ||| Sbjct: 254 gctgcagctgcacgagcccttcccgcgtgccataaatgacctacgaataggaagaaccct 313 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 ||||||||||||||||| | |||||||||||| |||||||||||||| |||||||||||| Sbjct: 314 agaacaaaatgagaagtagctaaccaacttctcggagagacataattgactgcattgatc 373 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| |||||||||||||||||||||||||| ||||||||||| || ||||||||||| Sbjct: 374 tcggtagctacgccacccacggaatttaaagaacctaaaggagcatgagtcatatattcc 433 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || ||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 434 gcagaacgccgttcttgccaaggctgtatgtcttttttcagcctactc 481
>dbj|AB112634.1| Humulus lupulus chloroplast DNA, downstream region of trnS, North American wild, haplotype:NA3 Length = 578 Score = 317 bits (160), Expect = 1e-83 Identities = 256/288 (88%) Strand = Plus / Plus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 |||||||| ||||| ||||||||||||| ||||||||||| |||||||||||||| || Sbjct: 195 ttaagaggagtcatggaaagaacaggttctaaatcacgatcaattcccttttcaaatccc 254 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || || ||||| || ||||||||||| || || || | |||||| ||| Sbjct: 255 gctgcagctgcacgagcccttcccgcgtgccataaatgacctacgaataggaagaaccct 314 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 ||||||||||||||||| | |||||||||||| |||||||||||||| |||||||||||| Sbjct: 315 agaacaaaatgagaagtagctaaccaacttctcggagagacataattgactgcattgatc 374 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| |||||||||||||||||||||||||| ||||||||||| || ||||||||||| Sbjct: 375 tcggtagctacgccacccacggaatttaaagaacctaaaggagcatgagtcatatattcc 434 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || ||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 435 gcagaacgccgttcttgccaaggctgtatgtcttttttcagcctactc 482
>dbj|AB112633.1| Humulus lupulus chloroplast DNA, downstream region of trnS, North American wild, haplotype:NA1 Length = 578 Score = 317 bits (160), Expect = 1e-83 Identities = 256/288 (88%) Strand = Plus / Plus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 |||||||| ||||| ||||||||||||| ||||||||||| |||||||||||||| || Sbjct: 195 ttaagaggagtcatggaaagaacaggttctaaatcacgatcaattcccttttcaaatccc 254 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || || ||||| || ||||||||||| || || || | |||||| ||| Sbjct: 255 gctgcagctgcacgagcccttcccgcgtgccataaatgacctacgaataggaagaaccct 314 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 ||||||||||||||||| | |||||||||||| |||||||||||||| |||||||||||| Sbjct: 315 agaacaaaatgagaagtagctaaccaacttctcggagagacataattgactgcattgatc 374 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| |||||||||||||||||||||||||| ||||||||||| || ||||||||||| Sbjct: 375 tcggtagctacgccacccacggaatttaaagaacctaaaggagcatgagtcatatattcc 434 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || ||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 435 gcagaacgccgttcttgccaaggctgtatgtcttttttcagcctactc 482
>dbj|AB112632.1| Humulus lupulus chloroplast DNA, downstream region of trnS, North American wild, haplotype:NA2 Length = 578 Score = 317 bits (160), Expect = 1e-83 Identities = 256/288 (88%) Strand = Plus / Plus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 |||||||| ||||| ||||||||||||| ||||||||||| |||||||||||||| || Sbjct: 195 ttaagaggagtcatggaaagaacaggttctaaatcacgatcaattcccttttcaaatccc 254 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || || ||||| || ||||||||||| || || || | |||||| ||| Sbjct: 255 gctgcagctgcacgagcccttcccgcgtgccataaatgacctacgaataggaagaaccct 314 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 ||||||||||||||||| | |||||||||||| |||||||||||||| |||||||||||| Sbjct: 315 agaacaaaatgagaagtagctaaccaacttctcggagagacataattgactgcattgatc 374 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| |||||||||||||||||||||||||| ||||||||||| || ||||||||||| Sbjct: 375 tcggtagctacgccacccacggaatttaaagaacctaaaggagcatgagtcatatattcc 434 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || ||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 435 gcagaacgccgttcttgccaaggctgtatgtcttttttcagcctactc 482
>dbj|AB112631.1| Humulus lupulus chloroplast DNA, downstream region of trnS, North American wild, haplotype:NA4 Length = 578 Score = 317 bits (160), Expect = 1e-83 Identities = 256/288 (88%) Strand = Plus / Plus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 |||||||| ||||| ||||||||||||| ||||||||||| |||||||||||||| || Sbjct: 195 ttaagaggagtcatggaaagaacaggttctaaatcacgatcaattcccttttcaaatccc 254 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || || ||||| || ||||||||||| || || || | |||||| ||| Sbjct: 255 gctgcagctgcacgagcccttcccgcgtgccataaatgacctacgaataggaagaaccct 314 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 ||||||||||||||||| | |||||||||||| |||||||||||||| |||||||||||| Sbjct: 315 agaacaaaatgagaagtagctaaccaacttctcggagagacataattgactgcattgatc 374 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| |||||||||||||||||||||||||| ||||||||||| || ||||||||||| Sbjct: 375 tcggtagctacgccacccacggaatttaaagaacctaaaggagcatgagtcatatattcc 434 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || ||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 435 gcagaacgccgttcttgccaaggctgtatgtcttttttcagcctactc 482
>dbj|AB112630.1| Humulus lupulus chloroplast DNA, downstream region of trnS, Japanese wild Length = 578 Score = 317 bits (160), Expect = 1e-83 Identities = 256/288 (88%) Strand = Plus / Plus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 |||||||| ||||| ||||||||||||| ||||||||||| |||||||||||||| || Sbjct: 195 ttaagaggagtcatggaaagaacaggttctaaatcacgatcaattcccttttcaaatccc 254 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || || ||||| || ||||||||||| || || || | |||||| ||| Sbjct: 255 gctgcagctgcacgagcccttcccgcgtgccataaatgacctacgaataggaagaaccct 314 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 ||||||||||||||||| | |||||||||||| |||||||||||||| |||||||||||| Sbjct: 315 agaacaaaatgagaagtagctaaccaacttctcggagagacataattgactgcattgatc 374 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| |||||||||||||||||||||||||| ||||||||||| || ||||||||||| Sbjct: 375 tcggtagctacgccacccacggaatttaaagaacctaaaggagcatgagtcatatattcc 434 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || ||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 435 gcagaacgccgttcttgccaaggctgtatgtcttttttcagcctactc 482
>dbj|AB112629.1| Humulus lupulus chloroplast DNA, downstream region of trnS, Chinese wild, haplotype:SC Length = 578 Score = 317 bits (160), Expect = 1e-83 Identities = 256/288 (88%) Strand = Plus / Plus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 |||||||| ||||| ||||||||||||| ||||||||||| |||||||||||||| || Sbjct: 195 ttaagaggagtcatggaaagaacaggttctaaatcacgatcaattcccttttcaaatccc 254 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || || ||||| || ||||||||||| || || || | |||||| ||| Sbjct: 255 gctgcagctgcacgagcccttcccgcgtgccataaatgacctacgaataggaagaaccct 314 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 ||||||||||||||||| | |||||||||||| |||||||||||||| |||||||||||| Sbjct: 315 agaacaaaatgagaagtagctaaccaacttctcggagagacataattgactgcattgatc 374 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| |||||||||||||||||||||||||| ||||||||||| || ||||||||||| Sbjct: 375 tcggtagctacgccacccacggaatttaaagaacctaaaggagcatgagtcatatattcc 434 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || ||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 435 gcagaacgccgttcttgccaaggctgtatgtcttttttcagcctactc 482
>dbj|AB112628.1| Humulus lupulus chloroplast DNA, downstream region of trnS, Chinese wild, haplotype:NC Length = 578 Score = 317 bits (160), Expect = 1e-83 Identities = 256/288 (88%) Strand = Plus / Plus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 |||||||| ||||| ||||||||||||| ||||||||||| |||||||||||||| || Sbjct: 195 ttaagaggagtcatggaaagaacaggttctaaatcacgatcaattcccttttcaaatccc 254 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || || ||||| || ||||||||||| || || || | |||||| ||| Sbjct: 255 gctgcagctgcacgagcccttcccgcgtgccataaatgacctacgaataggaagaaccct 314 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 ||||||||||||||||| | |||||||||||| |||||||||||||| |||||||||||| Sbjct: 315 agaacaaaatgagaagtagctaaccaacttctcggagagacataattgactgcattgatc 374 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| |||||||||||||||||||||||||| ||||||||||| || ||||||||||| Sbjct: 375 tcggtagctacgccacccacggaatttaaagaacctaaaggagcatgagtcatatattcc 434 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || ||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 435 gcagaacgccgttcttgccaaggctgtatgtcttttttcagcctactc 482
>dbj|AB112627.1| Humulus lupulus chloroplast DNA, downstream region of trnS, European wild, haplotype:EP Length = 578 Score = 317 bits (160), Expect = 1e-83 Identities = 256/288 (88%) Strand = Plus / Plus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 |||||||| ||||| ||||||||||||| ||||||||||| |||||||||||||| || Sbjct: 195 ttaagaggagtcatggaaagaacaggttctaaatcacgatcaattcccttttcaaatccc 254 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || || ||||| || ||||||||||| || || || | |||||| ||| Sbjct: 255 gctgcagctgcacgagcccttcccgcgtgccataaatgacctacgaataggaagaaccct 314 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 ||||||||||||||||| | |||||||||||| |||||||||||||| |||||||||||| Sbjct: 315 agaacaaaatgagaagtcgctaaccaacttctcggagagacataattgactgcattgatc 374 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| |||||||||||||||||||||||||| ||||||||||| || ||||||||||| Sbjct: 375 tcggtagctacgccacccacggaatttaaagaacctaaaggagcatgagtcatatattcc 434 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || ||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 435 gcagaacgccgttcttgccaaggctgtatgtcttttttcagcctactc 482
>dbj|AB112626.1| Humulus lupulus chloroplast DNA, downstream region of trnS, European wild, haplotype:E Length = 578 Score = 317 bits (160), Expect = 1e-83 Identities = 256/288 (88%) Strand = Plus / Plus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 |||||||| ||||| ||||||||||||| ||||||||||| |||||||||||||| || Sbjct: 195 ttaagaggagtcatggaaagaacaggttctaaatcacgatcaattcccttttcaaatccc 254 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || || ||||| || ||||||||||| || || || | |||||| ||| Sbjct: 255 gctgcagctgcacgagcccttcccgcgtgccataaatgacctacgaataggaagaaccct 314 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 ||||||||||||||||| | |||||||||||| |||||||||||||| |||||||||||| Sbjct: 315 agaacaaaatgagaagtcgctaaccaacttctcggagagacataattgactgcattgatc 374 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| |||||||||||||||||||||||||| ||||||||||| || ||||||||||| Sbjct: 375 tcggtagctacgccacccacggaatttaaagaacctaaaggagcatgagtcatatattcc 434 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || ||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 435 gcagaacgccgttcttgccaaggctgtatgtcttttttcagcctactc 482
>gb|M36833.1|SPICPCHLA Spinach chloroplast 44 kD chlorophyII alpha apoprotein and 32 kD-like polypeptide associated with the photosystem II reaction with the photosystem II reaction center genes, complete cds Length = 2914 Score = 317 bits (160), Expect = 1e-83 Identities = 250/280 (89%) Strand = Plus / Minus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 ||||||||| |||| ||||||||||||| ||||||||||| ||||| |||||||| ||| Sbjct: 2644 ttaagaggggtcatcgaaagaacaggttcaaaatcacgatcaattcctttttcaaatcct 2585 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || || ||||| |||||||| ||||| || || || | |||||||||| Sbjct: 2584 gctgcagctgcacgagcccttcccgcatgccacaaatgccctacgaataggaagaatcct 2525 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 2524 agaacaaaatgagaagtagataaccaacttctaggagagacataattgactgcattgatc 2465 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| || || |||||||| ||||||||||| ||||||||||| || |||||||||||| Sbjct: 2464 tcggtagccaccccacccacagaatttaaagaacctaaaggagcatgagtcatatattct 2405 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttca 318 ||||| || |||||||||||||||||||| |||||||||| Sbjct: 2404 gctgaacgtcgttcttgccaaggttgtatatcttttttca 2365
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 315 bits (159), Expect = 5e-83 Identities = 261/295 (88%) Strand = Plus / Minus Query: 32 atcttagttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttc 91 |||| |||||||||| ||||| | |||||||| || ||||||||||| ||||| ||||| Sbjct: 37030 atctcagttaagaggagtcatggagagaacaggctcaaaatcacgatcaattcctttttc 36971 Query: 92 aaaacctgctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaa 151 ||| || ||||| || || || |||||||| || ||||||||||| ||||| || | ||| Sbjct: 36970 aaatcccgctgcggctgcgcgagctcttcccgcgtgccataaatgacccacgaataggaa 36911 Query: 152 gaatcctagaacaaaatgagaagttgataaccaacttctaggagagacataattaactgc 211 ||||||||||||||||||||| || | |||||||||||| |||||||||||||||||||| Sbjct: 36910 gaatcctagaacaaaatgagaggtagctaaccaacttctcggagagacataattaactgc 36851 Query: 212 attgatctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcat 271 |||||||||||| ||||||||||| || ||||||||||| ||||||||||| || ||||| Sbjct: 36850 attgatctcggtagctacgccacctacagaatttaaagaccctaaaggagcatgcgtcat 36791 Query: 272 atattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 |||||| || || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 36790 atattccgcagaacgccgttcttgccaaggttgtatgtcttttttcaacctactc 36736
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 313 bits (158), Expect = 2e-82 Identities = 257/290 (88%) Strand = Plus / Minus Query: 37 agttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaac 96 |||||||||| ||||| ||||||||||||| ||||||||||||||||| |||||||| | Sbjct: 40256 agttaagaggagtcatggaaagaacaggttcaaaatcacgatcgattcctttttcaaatc 40197 Query: 97 ctgctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatc 156 |||||||||| || ||||| |||||||||||||| ||||| ||||| || | ||| |||| Sbjct: 40196 ctgctgcagctgcacgggcccttcctgcatgccacaaatgacccacgaataggaaaaatc 40137 Query: 157 ctagaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattga 216 |||||||||||||||| || | |||||||||||| |||||||||||||| |||||||||| Sbjct: 40136 ctagaacaaaatgagaggtagctaaccaacttctgggagagacataattgactgcattga 40077 Query: 217 tctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatatt 276 |||| || |||||||| ||||||||||||||||| ||||||||||| || |||||||||| Sbjct: 40076 tctctgtagctacgccgcccacggaatttaaagaacctaaaggagcatgagtcatatatt 40017 Query: 277 ctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 | || || || ||||||||||| || |||||||||||||||| ||||||| Sbjct: 40016 ccgccgaacgtcgttcttgccagggctgtatgtcttttttcagcctactc 39967
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 313 bits (158), Expect = 2e-82 Identities = 257/290 (88%) Strand = Plus / Plus Query: 37 agttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaac 96 ||||||||||| ||||| ||||| ||||||| ||||||||||| ||||| |||||||| | Sbjct: 30012 agttaagaggggtcatggaaagagcaggttcaaaatcacgatcaattcctttttcaaatc 30071 Query: 97 ctgctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatc 156 |||||||||| || || || ||||| || ||||||||||| || || || | |||||||| Sbjct: 30072 ctgctgcagctgcacgagcccttcccgcgtgccataaatgccctacgaataggaagaatc 30131 Query: 157 ctagaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattga 216 |||||||||||||||| || | ||||||||||||||||||||||||||| |||||||||| Sbjct: 30132 ctagaacaaaatgagaggtagctaaccaacttctaggagagacataattgactgcattga 30191 Query: 217 tctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatatt 276 ||||||| || |||||||| || ||||||||||| ||||||||||| || |||||||||| Sbjct: 30192 tctcggtagcaacgccaccaaccgaatttaaagaacctaaaggagcatgagtcatatatt 30251 Query: 277 ctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 |||| || ||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 30252 ctgcggaacgccgttcttgccaaggctgtatgtcttttttcagcctactc 30301
>dbj|AB206620.1| Arcterica nana chloroplast DNA, psbC-trnS intergenic spacer Length = 731 Score = 309 bits (156), Expect = 3e-81 Identities = 255/288 (88%) Strand = Plus / Minus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 ||||||||| ||||| ||||||| || || ||||||||||| ||||| |||||||| ||| Sbjct: 486 ttaagaggggtcatggaaagaacgggctcaaaatcacgatcaattcctttttcaaatcct 427 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || || ||||| || ||||| ||||| || || || ||||||||| || Sbjct: 426 gctgcagctgcacgagcccttcccgcgtgccacaaatgacctacgaataagaagaatgct 367 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 |||||||||||||| || | ||||||||||||||||||||||||||| |||||||||||| Sbjct: 366 agaacaaaatgagaggtagctaaccaacttctaggagagacataattgactgcattgatc 307 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| |||||||||||||||||||||||||| |||||||| || || |||||||||||| Sbjct: 306 tcggtagctacgccacccacggaatttaaagaacctaaaggcgcatgagtcatatattct 247 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || || ||||||||||||||||||||||| ||||||||||||||| Sbjct: 246 gcggaacgtcgttcttgccaaggttgtatgtcgtttttcaacctactc 199
>dbj|AB206616.1| Pieris formosa var. forrestii chloroplast DNA, psbC-trnS intergenic spacer Length = 754 Score = 309 bits (156), Expect = 3e-81 Identities = 255/288 (88%) Strand = Plus / Minus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 ||||||||| ||||| ||||||| || || ||||||||||| |||||||||||||| ||| Sbjct: 486 ttaagaggggtcatggaaagaacgggctcaaaatcacgatcaattcccttttcaaatcct 427 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || || ||||| || ||||| ||||| || || || ||||||||| || Sbjct: 426 gctgcagctgcacgagcccttcccgcgtgccacaaatgacctacgaataagaagaatgct 367 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 |||||||||||||| || | ||||||||||||||||||||||||||| |||||||||||| Sbjct: 366 agaacaaaatgagaggtagctaaccaacttctaggagagacataattgactgcattgatc 307 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| ||||| |||||||||||||||||||| |||||||| || || |||||||||||| Sbjct: 306 tcggtagctacaccacccacggaatttaaagaacctaaaggcgcatgagtcatatattct 247 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || || ||||||||||||||||||||||| ||||||||||||||| Sbjct: 246 gcggaacgtcgttcttgccaaggttgtatgtcgtttttcaacctactc 199
>gb|AF134324.1|AF134324 Populus deltoides Qa-binding protein PsbD (psbD) and chlorophyll a-binding protein PsbC (psbC) genes, chloroplast genes encoding chloroplast proteins, complete cds Length = 2545 Score = 307 bits (155), Expect = 1e-80 Identities = 260/295 (88%) Strand = Plus / Minus Query: 32 atcttagttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttc 91 |||| |||||||||| |||||||||||||||||||||| || ||||||||||| ||||| Sbjct: 2505 atctcagttaagaggagtcatgtaaagaacaggttccaagtctcgatcgattcctttttc 2446 Query: 92 aaaacctgctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaa 151 ||| || |||||||| || || || ||||| || |||||||||||||| || || | ||| Sbjct: 2445 aaatccagctgcagctgcacgagcccttcccgcgtgccataaatggcctacgaataggaa 2386 Query: 152 gaatcctagaacaaaatgagaagttgataaccaacttctaggagagacataattaactgc 211 |||||| |||||||||||||| || | |||||||||||||||||||||||| || ||||| Sbjct: 2385 gaatccgagaacaaaatgagaggtagctaaccaacttctaggagagacatagttgactgc 2326 Query: 212 attgatctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcat 271 |||||| ||||| ||||||||||| ||||||||||| || |||||||| || |||||||| Sbjct: 2325 attgatttcggtagctacgccacctacggaatttaatgaacctaaaggcgcatgggtcat 2266 Query: 272 atattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 |||||| || || || ||||||||||||||||||||||||||||||||||||||| Sbjct: 2265 atattccgcagaacgtcgttcttgccaaggttgtatgtcttttttcaacctactc 2211
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 305 bits (154), Expect = 5e-80 Identities = 250/282 (88%) Strand = Plus / Minus Query: 37 agttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaac 96 |||||||||| ||||| | ||||||||||| ||||||||||| ||||| |||||||| | Sbjct: 37229 agttaagaggagtcatgaacagaacaggttcaaaatcacgatcaattcctttttcaaatc 37170 Query: 97 ctgctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatc 156 |||| ||||| || || || |||||||||||||||||||| || || || |||||||||| Sbjct: 37169 ctgcggcagctgcacgagcccttcctgcatgccataaatgacctacgaataagaagaatc 37110 Query: 157 ctagaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattga 216 |||||||||||||||| || | ||||||||||||||||||||||||||| |||||||| | Sbjct: 37109 ctagaacaaaatgagaggtagctaaccaacttctaggagagacataattgactgcattaa 37050 Query: 217 tctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatatt 276 | ||||| |||||||| ||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 37049 tttcggtagctacgccccccacggaatttaaagaacctaaaggagcatgggtcatatatt 36990 Query: 277 ctgctgagcgccgttcttgccaaggttgtatgtcttttttca 318 | || || || ||||||||||||||||| ||||||||||||| Sbjct: 36989 ccgcggaacgtcgttcttgccaaggttggatgtcttttttca 36948
>gb|DQ069646.1| Ranunculus macranthus photosystem II 44 kDa protein (psbC) gene, partial cds; chloroplast Length = 1419 Score = 303 bits (153), Expect = 2e-79 Identities = 255/289 (88%) Strand = Plus / Minus Query: 38 gttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacc 97 |||||||||| ||||| ||||||||||||||||||| ||||| ||||| |||||||| || Sbjct: 1419 gttaagaggggtcatgaaaagaacaggttccaaatcccgatcaattcctttttcaaatcc 1360 Query: 98 tgctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcc 157 ||| ||||| || ||||| ||||| |||||||| || || ||||| || | ||||||||| Sbjct: 1359 tgcggcagctgcacgggcccttcccgcatgccacaagtgacccacgaataggaagaatcc 1300 Query: 158 tagaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgat 217 ||||||||||||||| || ||||||||||||||||| || |||||||| ||||||||||| Sbjct: 1299 tagaacaaaatgagaggtggataaccaacttctaggcgaaacataattgactgcattgat 1240 Query: 218 ctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattc 277 |||||| ||||| ||||| |||||||||||||| ||||||||||| || ||||||||||| Sbjct: 1239 ctcggtagctacaccaccgacggaatttaaagaacctaaaggagcatgagtcatatattc 1180 Query: 278 tgctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || || |||||||||||||||||||| |||||||||| ||||||| Sbjct: 1179 cgcggaacgacgttcttgccaaggttgtatatcttttttcagcctactc 1131
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 301 bits (152), Expect = 7e-79 Identities = 254/288 (88%) Strand = Plus / Minus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 ||||| ||| ||||| ||||||||||||| ||||||||||| |||||||||||||| ||| Sbjct: 38418 ttaaggggggtcatggaaagaacaggttcaaaatcacgatcaattcccttttcaaatcct 38359 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 |||||||| || || || ||||| || ||||||||||| || || || | ||||||||| Sbjct: 38358 gctgcagctgcacgagcccttcccgcgtgccataaatgacctacgaatagaaagaatcct 38299 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 ||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||| Sbjct: 38298 agaacaaaatgagaagtagctaaccaacttctaggagagacataattgactgcattgatc 38239 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| || || |||||||| ||||||||||| ||||||||||| || |||||||||||| Sbjct: 38238 tcggtagcgacaccacccacagaatttaaagaacctaaaggagcatgagtcatatattct 38179 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || || |||||||||||||| ||||| |||||||||| ||||||| Sbjct: 38178 gcggaacgacgttcttgccaaggctgtatatcttttttcagcctactc 38131
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 299 bits (151), Expect = 3e-78 Identities = 256/291 (87%) Strand = Plus / Minus Query: 35 ttagttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaa 94 |||||||||||| |||| ||||||||||||| ||||||||||| ||||| |||||||| Sbjct: 34320 ttagttaagaggagtcatagaaagaacaggttcaaaatcacgatcaattcctttttcaaa 34261 Query: 95 acctgctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaa 154 |||||||| || || || |||||||| || ||||||||||| ||||| || | |||||| Sbjct: 34260 tcctgctgccgctgcccgagctcttcccgcgtgccataaatgacccacgaataggaagaa 34201 Query: 155 tcctagaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcatt 214 |||||||||||||||||| || |||||||||||||| |||||||| ||||| |||||||| Sbjct: 34200 tcctagaacaaaatgagaggtagataaccaacttctcggagagacgtaattgactgcatt 34141 Query: 215 gatctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatata 274 |||||| || |||||||| || || |||||||| || ||||||||||| || |||||||| Sbjct: 34140 gatctcagtagctacgccccctacagaatttaaggaacctaaaggagcatgagtcatata 34081 Query: 275 ttctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacctact 325 |||||| || || |||||||||||||||||||||||||||||||||||||| Sbjct: 34080 ttctgcagaacgtcgttcttgccaaggttgtatgtcttttttcaacctact 34030
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 293 bits (148), Expect = 2e-76 Identities = 256/292 (87%) Strand = Plus / Minus Query: 35 ttagttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaa 94 |||||||||||| ||||| ||||||||||||| ||||||||||| ||||| |||||||| Sbjct: 35141 ttagttaagaggagtcatggaaagaacaggttcaaaatcacgatcaattcctttttcaaa 35082 Query: 95 acctgctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaa 154 || ||||| || || || || ||||| || ||||||||||| ||||| || | ||| || Sbjct: 35081 tcccgctgccgctgcccgagcccttcccgcgtgccataaatgacccacgaataggaaaaa 35022 Query: 155 tcctagaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcatt 214 |||||||||||||||||| || |||||||||||||| |||||||||||||| |||||||| Sbjct: 35021 tcctagaacaaaatgagaggtagataaccaacttctcggagagacataattgactgcatt 34962 Query: 215 gatctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatata 274 |||||| || |||||||| || || |||||||| || ||||||||||| || |||||||| Sbjct: 34961 gatctcagtagctacgccccctacagaatttaacgaacctaaaggagcatgagtcatata 34902 Query: 275 ttctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 |||||| || || ||||||||||||||||||||||||||||||||||||||| Sbjct: 34901 ttctgccgaacgtcgttcttgccaaggttgtatgtcttttttcaacctactc 34850
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 285 bits (144), Expect = 4e-74 Identities = 246/280 (87%) Strand = Plus / Minus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 |||||||| ||||| |||||||||| ||| |||| ||||| ||||| |||||||| ||| Sbjct: 98501 ttaagaggagtcatgaaaagaacaggctccgaatctcgatcaattcctttttcaaatcct 98442 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 || ||||| || || |||||||| || ||||||||||| || || || | |||||||||| Sbjct: 98441 gcggcagctgcacgagctcttcccgcgtgccataaatgacctacgaataggaagaatcct 98382 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 ||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| ||| Sbjct: 98381 agaacaaaatgagaagtagctaaccaacttctaggagagacataattgactgcattaatc 98322 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 || || |||||||||||||||||||||||||| ||||||||||| || ||||||||||| Sbjct: 98321 tctgtagctacgccacccacggaatttaaagaacctaaaggagcatgagtcatatattcc 98262 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttca 318 || || || |||||||||||||| |||||||||||||||| Sbjct: 98261 gcagaacgacgttcttgccaaggctgtatgtcttttttca 98222
>gb|AC145457.1| Cicer arietinum strain FLIP84-92C clone gl1-40c9, complete sequence Length = 23359 Score = 278 bits (140), Expect = 1e-71 Identities = 245/280 (87%) Strand = Plus / Minus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 |||||||| ||||| |||||||||| || ||||| ||||| ||||| |||||||| ||| Sbjct: 19204 ttaagaggagtcatggaaagaacaggctcaaaatctcgatcaattcctttttcaaatcct 19145 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 || ||||| || || |||||||| || ||||||||||| || || || | |||||||||| Sbjct: 19144 gcagcagctgcgcgagctcttcccgcgtgccataaatgacctacgaataggaagaatcct 19085 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 ||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| ||| Sbjct: 19084 agaacaaaatgagaagtagctaaccaacttctaggagagacataattgactgcattaatc 19025 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 || || ||||||||||| |||||||||||||| ||||||||||| || ||||||||||| Sbjct: 19024 tctgtagctacgccaccaacggaatttaaagaacctaaaggagcatgagtcatatattcc 18965 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttca 318 || || || |||||||||||||| |||||||||||||||| Sbjct: 18964 gcggaacgacgttcttgccaaggctgtatgtcttttttca 18925
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 278 bits (140), Expect = 1e-71 Identities = 245/280 (87%) Strand = Plus / Plus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 |||||||| ||||| ||||||| ||||| ||||| ||||| ||||| |||||||| ||| Sbjct: 25675 ttaagaggagtcatggaaagaactggttcaaaatctcgatcaattcctttttcaaatcct 25734 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 || ||||| || || |||||||| || |||||||||||||| ||||| | |||||||||| Sbjct: 25735 gcggcagctgcgcgagctcttcccgcgtgccataaatggcctacaaataggaagaatcct 25794 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 ||||||||||||||||| | |||||||||||||||||| |||||||| |||||||| ||| Sbjct: 25795 agaacaaaatgagaagtagctaaccaacttctaggagaaacataattgactgcattaatc 25854 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 || || ||||||||||||||||||||||| || ||||||||||| || ||||||||||| Sbjct: 25855 tctgtagctacgccacccacggaatttaaggaacctaaaggagcatgagtcatatattcc 25914 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttca 318 || || || |||||||||||||| ||||| |||||||||| Sbjct: 25915 gcagaacggcgttcttgccaaggctgtatatcttttttca 25954
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 276 bits (139), Expect = 4e-71 Identities = 249/283 (87%), Gaps = 2/283 (0%) Strand = Plus / Minus Query: 37 agttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaac 96 |||||||||| ||||| | ||||||||||| ||||||||||| ||||| |||||||| | Sbjct: 37246 agttaagaggagtcatgaacagaacaggttcaaaatcacgatcaattcctttttcaaatc 37187 Query: 97 ctgctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatc 156 |||| ||||| || || || |||||||||||||||||||| || || || |||||||||| Sbjct: 37186 ctgcggcagctgcacgagcccttcctgcatgccataaatgacctacgaataagaagaatc 37127 Query: 157 ctagaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattga 216 |||||||||||||||| || | ||||||||||||||||||||||||||| |||||||| | Sbjct: 37126 ctagaacaaaatgagaggtagctaaccaacttctaggagagacataattgactgcattaa 37067 Query: 217 tctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatatt 276 | ||||| |||||||| ||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 37066 tttcggtagctacgccccccacggaatttaaagaacctaaaggagc-agggtcatatatt 37008 Query: 277 ctgctgagcgccgttcttgccaagg-ttgtatgtcttttttca 318 | || || || |||||||||||||| ||| ||||||||||||| Sbjct: 37007 ccgcggaacgtcgttcttgccaaggtttggatgtcttttttca 36965
>gb|AY865171.1| Lactuca sativa chloroplast inversion region Length = 28722 Score = 270 bits (136), Expect = 3e-69 Identities = 163/172 (94%) Strand = Plus / Minus Query: 147 aagaagaatcctagaacaaaatgagaagttgataaccaacttctaggagagacataatta 206 ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 28711 aagaagaatcctagaacaaaatgagaagtagctaaccaacttctaggagagacataattg 28652 Query: 207 actgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgg 266 ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 28651 actgcattgatctcggtagctacgccacccacggaatttaaagaacctaaaggagcatgg 28592 Query: 267 gtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttca 318 |||||||||||||| || || ||||||||||||||||||||||||||||||| Sbjct: 28591 gtcatatattctgcggaacgacgttcttgccaaggttgtatgtcttttttca 28540
>gb|M27309.1|PEACPD2 Pisum sativum D2 photosystem II protein and 44 kd photosystem II protein genes, complete cds; tRNA-Ser gene, complete sequence; and unknown gene; chloroplast genes for chloroplast products Length = 4078 Score = 270 bits (136), Expect = 3e-69 Identities = 244/280 (87%) Strand = Plus / Minus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 |||||||| ||||| |||||||||| || ||||| | ||| ||||| |||||||| ||| Sbjct: 2907 ttaagaggagtcatggaaagaacaggctcaaaatctctatcaattcctttttcaaatcct 2848 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 || ||||| || || |||||||| || ||||||||||| || || || | |||||||||| Sbjct: 2847 gcggcagctgcgcgagctcttcccgcgtgccataaatgacctacgaataggaagaatcct 2788 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 ||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| ||| Sbjct: 2787 agaacaaaatgagaagtagctaaccaacttctaggagagacataattgactgcattaatc 2728 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 || || |||||||||||||||||||||||||| ||||||||||| || ||||||||||| Sbjct: 2727 tctgtagctacgccacccacggaatttaaagaacctaaaggagcatgagtcatatattcc 2668 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttca 318 || || || |||||||||||||| ||||| |||||||||| Sbjct: 2667 gcggaacgacgttcttgccaaggctgtatatcttttttca 2628
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 254 bits (128), Expect = 2e-64 Identities = 245/284 (86%) Strand = Plus / Plus Query: 37 agttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaac 96 |||||||||| ||||| |||| |||||||| ||||||||||| || || || ||||| | Sbjct: 78179 agttaagaggagtcatggaaaggacaggttcgaaatcacgatcaatccctttctcaaatc 78238 Query: 97 ctgctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatc 156 |||||||||| || || || ||||| |||||||| |||||||| || || ||||| |||| Sbjct: 78239 ctgctgcagctgcacgagcccttcccgcatgccacaaatggcctacgaagaagaaaaatc 78298 Query: 157 ctagaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattga 216 ||||||| ||||| || || ||||||||||||| |||||||||||||| || ||||||| Sbjct: 78299 ctagaacgaaatgggaggtggataaccaacttcggggagagacataattcaccgcattga 78358 Query: 217 tctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatatt 276 | ||||| ||||| |||||||| ||||||||||| ||||||||||| || |||||||||| Sbjct: 78359 tttcggtagctacaccacccacagaatttaaagaacctaaaggagcatgagtcatatatt 78418 Query: 277 ctgctgagcgccgttcttgccaaggttgtatgtcttttttcaac 320 ||||||| || ||||| |||||||| |||||||||||||||||| Sbjct: 78419 ctgctgaacgtcgttcctgccaaggctgtatgtcttttttcaac 78462
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 246 bits (124), Expect = 4e-62 Identities = 232/268 (86%) Strand = Plus / Plus Query: 49 tcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacctgctgcagcag 108 ||||| ||||||||||||| ||||| ||||| ||||| |||||||| || || ||||| | Sbjct: 26033 tcatggaaagaacaggttcaaaatctcgatcaattcctttttcaaatcccgcggcagctg 26092 Query: 109 ctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcctagaacaaaat 168 | || |||||||| || ||||||||||| ||||| || | ||||||||||||||||| | Sbjct: 26093 cgcgagctcttccagcgtgccataaatgacccacgaatagaaagaatcctagaacaaagt 26152 Query: 169 gagaagttgataaccaacttctaggagagacataattaactgcattgatctcggtcgcta 228 ||||||| | |||||||||||||||||| || ||||| |||||||||||||| || |||| Sbjct: 26153 gagaagtagctaaccaacttctaggagaaacgtaattgactgcattgatctccgtagcta 26212 Query: 229 cgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattctgctgagcgcc 288 | || |||||||||||||| || |||||||||||||| ||||||||||| || || || | Sbjct: 26213 caccccccacggaatttaaggaacctaaaggagcgtgagtcatatattccgcggaacgac 26272 Query: 289 gttcttgccaaggttgtatgtctttttt 316 ||||||||||||| |||||||||||||| Sbjct: 26273 gttcttgccaaggctgtatgtctttttt 26300
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 238 bits (120), Expect = 9e-60 Identities = 243/284 (85%) Strand = Plus / Plus Query: 37 agttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaac 96 |||||||||| ||||| |||| |||||||| ||||||||||| || || || ||||| | Sbjct: 80144 agttaagaggagtcatggaaaggacaggttcgaaatcacgatcaatccctttctcaaatc 80203 Query: 97 ctgctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatc 156 |||||||||| || || || ||||| |||||||| ||||| || || || ||||| |||| Sbjct: 80204 ctgctgcagctgcacgagcccttcccgcatgccacaaatgacctacgaagaagaaaaatc 80263 Query: 157 ctagaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattga 216 ||||||| ||||| || || ||||||||||||| |||||||||||||| || ||||||| Sbjct: 80264 ctagaacgaaatgggaggtggataaccaacttcggggagagacataattcaccgcattga 80323 Query: 217 tctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatatt 276 | ||||| ||||| |||||||| ||||||||||| ||||||||||| || |||||||||| Sbjct: 80324 tttcggtagctacaccacccacagaatttaaagaacctaaaggagcatgagtcatatatt 80383 Query: 277 ctgctgagcgccgttcttgccaaggttgtatgtcttttttcaac 320 ||||||| || ||||| |||||||| |||||||||||| ||||| Sbjct: 80384 ctgctgaacgtcgttcctgccaaggctgtatgtcttttctcaac 80427
>gb|AC140103.7| Medicago truncatula clone mth2-9i16, complete sequence Length = 96937 Score = 228 bits (115), Expect = 9e-57 Identities = 208/239 (87%) Strand = Plus / Minus Query: 39 ttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaacct 98 |||||||| ||||| |||||||||| ||| |||| ||||| ||||| |||||||| ||| Sbjct: 59834 ttaagaggagtcatgaaaagaacaggctccgaatctcgatcaattcctttttcaaatcct 59775 Query: 99 gctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatcct 158 || ||||| || || |||||||| || || |||||||| || || || | |||||||||| Sbjct: 59774 gcggcagctgcacgagctcttcccgcgtgtcataaatgacctacgaataggaagaatcct 59715 Query: 159 agaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatc 218 ||||||||||||||||| | |||||| |||||||||||||||||||| |||||||| ||| Sbjct: 59714 agaacaaaatgagaagtagctaaccagcttctaggagagacataattgactgcattaatc 59655 Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattc 277 || || |||||||||||||||||||||||||| ||||||||||| || ||||||||||| Sbjct: 59654 tctgtagctacgccacccacggaatttaaagaacctaaaggagcatgagtcatatattc 59596
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 226 bits (114), Expect = 3e-56 Identities = 225/262 (85%) Strand = Plus / Minus Query: 55 aaagaacaggttccaaatcacgatcgattcccttttcaaaacctgctgcagcagctcggg 114 ||||||| ||||| ||||||||||| ||||| ||||||||||| ||||||||||| || | Sbjct: 41265 aaagaactggttcaaaatcacgatcaattcctttttcaaaaccagctgcagcagcacgtg 41206 Query: 115 ctcttcctgcatgccataaatggcccacaaaaaagaagaatcctagaacaaaatgagaag 174 ||||||| ||||||||||| || || ||||| || ||||| |||| ||| |||||||| | Sbjct: 41205 ctcttccagcatgccataagtgccctacaaagaaaaagaaacctaaaacgaaatgagatg 41146 Query: 175 ttgataaccaacttctaggagagacataattaactgcattgatctcggtcgctacgccac 234 ||| |||||||||||||||||| |||||||| |||||||| || || || ||||| |||| Sbjct: 41145 ttgctaaccaacttctaggagaaacataatttactgcattaatttctgttgctactccac 41086 Query: 235 ccacggaatttaaagagcctaaaggagcgtgggtcatatattctgctgagcgccgttctt 294 | || |||||||| || ||||| ||||| || ||||| |||||||| || || ||||||| Sbjct: 41085 ctacagaatttaatgatcctaatggagcatgagtcatgtattctgcagatcgacgttctt 41026 Query: 295 gccaaggttgtatgtctttttt 316 ||||||||||||| |||||||| Sbjct: 41025 gccaaggttgtatatctttttt 41004
>emb|X01647.1|CHMPTRN Marchantia polymorpha chloroplast DNA for tRNA-Ser(UGA), tRNA-Gly(GCC), tRNA-Met(CAU), ORF701, ORF702 and ORF703 Length = 3381 Score = 226 bits (114), Expect = 3e-56 Identities = 225/262 (85%) Strand = Plus / Minus Query: 55 aaagaacaggttccaaatcacgatcgattcccttttcaaaacctgctgcagcagctcggg 114 ||||||| ||||| ||||||||||| ||||| ||||||||||| ||||||||||| || | Sbjct: 1487 aaagaactggttcaaaatcacgatcaattcctttttcaaaaccagctgcagcagcacgtg 1428 Query: 115 ctcttcctgcatgccataaatggcccacaaaaaagaagaatcctagaacaaaatgagaag 174 ||||||| ||||||||||| || || ||||| || ||||| |||| ||| |||||||| | Sbjct: 1427 ctcttccagcatgccataagtgccctacaaagaaaaagaaacctaaaacgaaatgagatg 1368 Query: 175 ttgataaccaacttctaggagagacataattaactgcattgatctcggtcgctacgccac 234 ||| |||||||||||||||||| |||||||| |||||||| || || || ||||| |||| Sbjct: 1367 ttgctaaccaacttctaggagaaacataatttactgcattaatttctgttgctactccac 1308 Query: 235 ccacggaatttaaagagcctaaaggagcgtgggtcatatattctgctgagcgccgttctt 294 | || |||||||| || ||||| ||||| || ||||| |||||||| || || ||||||| Sbjct: 1307 ctacagaatttaatgatcctaatggagcatgagtcatgtattctgcagatcgacgttctt 1248 Query: 295 gccaaggttgtatgtctttttt 316 ||||||||||||| |||||||| Sbjct: 1247 gccaaggttgtatatctttttt 1226
>gb|AF239778.1| Chloranthus japonicus photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2222 Score = 220 bits (111), Expect = 2e-54 Identities = 150/163 (92%) Strand = Plus / Minus Query: 164 aaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatctcggt 223 ||||||||| || | ||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 2222 aaaatgagaggtagctaaccaacttctaggagagacataattgactgcattgatctcggt 2163 Query: 224 cgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattctgctga 283 |||||||||||||||||||||||||| ||||||||||| || ||||||||||| || || Sbjct: 2162 agctacgccacccacggaatttaaagaacctaaaggagcatgagtcatatattccgccga 2103 Query: 284 gcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || ||||||||||||||||||||||||||||||| ||||||| Sbjct: 2102 acgtcgttcttgccaaggttgtatgtcttttttcagcctactc 2060
>gb|AY147792.1| Abies alba photosystem II 44 kDa protein (psbC) gene, psbC-B allele, complete cds; chloroplast gene for chloroplast product Length = 1571 Score = 214 bits (108), Expect = 1e-52 Identities = 240/284 (84%) Strand = Plus / Plus Query: 37 agttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaac 96 |||||||||| ||||| |||| |||||||| ||||||||||| ||||| |||||||| | Sbjct: 135 agttaagaggagtcatggaaaggacaggttcgaaatcacgatcaattcctttttcaaatc 194 Query: 97 ctgctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatc 156 |||||||||| || || || ||||| |||||||| ||||| || | || ||||| |||| Sbjct: 195 ctgctgcagctgcacgagcccttcccgcatgccacaaatgacctatgaacaagaaaaatc 254 Query: 157 ctagaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattga 216 ||| ||| ||||| || || ||||||||||||| |||||||||||||| || ||||||| Sbjct: 255 ctaaaacgaaatgggaggtggataaccaacttcggggagagacataattcaccgcattga 314 Query: 217 tctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatatt 276 | ||||| ||||| |||||||| |||||| |||| ||||||||||| || |||||||||| Sbjct: 315 tttcggtagctacaccacccacagaatttgaagaacctaaaggagcatgagtcatatatt 374 Query: 277 ctgctgagcgccgttcttgccaaggttgtatgtcttttttcaac 320 |||| || || ||||| |||||||| |||||||| ||| ||||| Sbjct: 375 ctgccgaacgtcgttcctgccaaggctgtatgtcctttctcaac 418
>gb|AY147791.1| Abies alba photosystem II 44 kDa protein (psbC) gene, psbC-A allele, complete cds; chloroplast gene for chloroplast product Length = 1571 Score = 214 bits (108), Expect = 1e-52 Identities = 240/284 (84%) Strand = Plus / Plus Query: 37 agttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaaac 96 |||||||||| ||||| |||| |||||||| ||||||||||| ||||| |||||||| | Sbjct: 135 agttaagaggagtcatggaaaggacaggttcgaaatcacgatcaattcctttttcaaatc 194 Query: 97 ctgctgcagcagctcgggctcttcctgcatgccataaatggcccacaaaaaagaagaatc 156 |||||||||| || || || ||||| |||||||| ||||| || | || ||||| |||| Sbjct: 195 ctgctgcagctgcacgagcccttcccgcatgccacaaatgacctatgaacaagaaaaatc 254 Query: 157 ctagaacaaaatgagaagttgataaccaacttctaggagagacataattaactgcattga 216 ||| ||| ||||| || || ||||||||||||| |||||||||||||| || ||||||| Sbjct: 255 ctaaaacgaaatgggaggtggataaccaacttcggggagagacataattcaccgcattga 314 Query: 217 tctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatatt 276 | ||||| ||||| |||||||| |||||| |||| ||||||||||| || |||||||||| Sbjct: 315 tttcggtagctacaccacccacagaatttgaagaacctaaaggagcatgagtcatatatt 374 Query: 277 ctgctgagcgccgttcttgccaaggttgtatgtcttttttcaac 320 |||| || || ||||| |||||||| |||||||| ||| ||||| Sbjct: 375 ctgccgaacgtcgttcctgccaaggctgtatgtcctttctcaac 418
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 212 bits (107), Expect = 5e-52 Identities = 230/271 (84%) Strand = Plus / Plus Query: 55 aaagaacaggttccaaatcacgatcgattcccttttcaaaacctgctgcagcagctcggg 114 |||||||||| || ||||||||||| ||||| |||||||| || |||||||| || || | Sbjct: 42099 aaagaacaggctcaaaatcacgatcaattcctttttcaaatccagctgcagctgcacgtg 42158 Query: 115 ctcttcctgcatgccataaatggcccacaaaaaagaagaatcctagaacaaaatgagaag 174 |||||||||||||||||||||| || ||||| ||||| ||||||| ||||| ||||||| Sbjct: 42159 ctcttcctgcatgccataaatgacctacaaagaagaaaaatcctaatacaaagtgagaag 42218 Query: 175 ttgataaccaacttctaggagagacataattaactgcattgatctcggtcgctacgccac 234 | | ||||||||| | ||||| |||||||| |||||||| || || || ||||| |||| Sbjct: 42219 tagctaaccaactacgtggagacacataatttactgcattaatttcagtagctacaccac 42278 Query: 235 ccacggaatttaaagagcctaaaggagcgtgggtcatatattctgctgagcgccgttctt 294 | || ||||||||||| ||||| ||||| || |||||||||||||| || || | ||||| Sbjct: 42279 ctacagaatttaaagaacctaacggagcatgagtcatatattctgcagaacgtctttctt 42338 Query: 295 gccaaggttgtatgtcttttttcaacctact 325 |||||||||| || |||||||||||| |||| Sbjct: 42339 gccaaggttgaatatcttttttcaacttact 42369
>gb|AY116657.1| Trimenia moorei photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2222 Score = 196 bits (99), Expect = 3e-47 Identities = 146/162 (90%) Strand = Plus / Minus Query: 164 aaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatctcggt 223 ||||||||| || | |||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 2222 aaaatgagaggtagctaaccaacttctgggagagacataattgactgcattgatctcggt 2163 Query: 224 cgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattctgctga 283 | ||| |||||||||||||||||||| ||||| ||||| || ||||||||||| || || Sbjct: 2162 agntacaccacccacggaatttaaagaacctaagggagcatgagtcatatattccgccga 2103 Query: 284 gcgccgttcttgccaaggttgtatgtcttttttcaacctact 325 ||| ||||||||||||||||||||||||||||||| |||||| Sbjct: 2102 gcgtcgttcttgccaaggttgtatgtcttttttcagcctact 2061
>gb|AY147656.1| Typha angustifolia photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 184 bits (93), Expect = 1e-43 Identities = 117/125 (93%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 2184 aattaactgcattgatctcggtagctacgccacccacggaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || |||||||||||||| || || ||||||||||||||||||||||||||||||| || Sbjct: 2124 catgagtcatatattctgccgaacgtcgttcttgccaaggttgtatgtcttttttcagcc 2065 Query: 322 tactc 326 ||||| Sbjct: 2064 tactc 2060
>gb|AF528940.1| Stewartia pseudocamellia photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 184 bits (93), Expect = 1e-43 Identities = 117/125 (93%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| ||||||||||||||||| |||||||| ||||||||||||||||| |||||||||| Sbjct: 2184 aattgactgcattgatctcggtagctacgccccccacggaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | ||||||||||||||||| || |||||||||||||||||||||||||||||||||| || Sbjct: 2124 catgggtcatatattctgcggaacgccgttcttgccaaggttgtatgtcttttttcagcc 2065 Query: 322 tactc 326 ||||| Sbjct: 2064 tactc 2060
>gb|AF528937.1| Ribes aureum photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 184 bits (93), Expect = 1e-43 Identities = 117/125 (93%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 2184 aattgactgcattgatctcggtagctacgccacccacggaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || ||||||||||| || || ||||||||||||||||||||||||||||||||||||| Sbjct: 2124 catgagtcatatattccgcggaacgccgttcttgccaaggttgtatgtcttttttcaacc 2065 Query: 322 tactc 326 ||||| Sbjct: 2064 tactc 2060
>gb|AC087599.14| Oryza sativa chromosome 10 BAC OSJNBa0057L21 genomic sequence, complete sequence Length = 183046 Score = 184 bits (93), Expect = 1e-43 Identities = 121/129 (93%), Gaps = 1/129 (0%) Strand = Plus / Minus Query: 198 acataattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaa 257 |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| || Sbjct: 82946 acataattaactgcattgatctcggtagctacgccacccacagaatttaaagagcct-aa 82888 Query: 258 ggagcgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttc 317 ||||| ||||||||||||||||| || || ||||||||| |||||||||||||||||||| Sbjct: 82887 ggagcatgggtcatatattctgccgaacgtcgttcttgctaaggttgtatgtcttttttc 82828 Query: 318 aacctactc 326 ||||||||| Sbjct: 82827 aacctactc 82819
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 184 bits (93), Expect = 1e-43 Identities = 213/253 (84%) Strand = Plus / Plus Query: 55 aaagaacaggttccaaatcacgatcgattcccttttcaaaacctgctgcagcagctcggg 114 ||||||||||||| ||||||||| ||||| || || || || |||||||| || || | Sbjct: 35261 aaagaacaggttcagtatcacgatcaattcctttctcgaatccagctgcagcggcccgag 35320 Query: 115 ctcttcctgcatgccataaatggcccacaaaaaagaagaatcctagaacaaaatgagaag 174 ||||||| || ||||||||||| || |||||||||||||| |||||||| ||||| |||| Sbjct: 35321 ctcttcccgcgtgccataaatgacctacaaaaaagaagaaacctagaacgaaatgggaag 35380 Query: 175 ttgataaccaacttctaggagagacataattaactgcattgatctcggtcgctacgccac 234 | | ||||||||||| |||||| ||||| || || ||||| ||||| || ||||| |||| Sbjct: 35381 tggctaaccaacttcgaggagatacatagttcacagcatttatctcagtagctactccac 35440 Query: 235 ccacggaatttaaagagcctaaaggagcgtgggtcatatattctgctgagcgccgttctt 294 |||| ||||| ||||| || |||||||| || |||||||||||||| || || ||||| | Sbjct: 35441 ccacagaattcaaagaacccaaaggagcatgagtcatatattctgccgaacgtcgttcct 35500 Query: 295 gccaaggttgtat 307 ||||||||||||| Sbjct: 35501 gccaaggttgtat 35513
>gb|AF528930.1| Hydrangea macrophylla photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 182 bits (92), Expect = 5e-43 Identities = 116/124 (93%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 2184 aattgactgcattgatctcggtagctacgccacccacggaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || |||||||||||||| || |||||||||||||||||||||||||||||||||| || Sbjct: 2124 catgagtcatatattctgcggaacgccgttcttgccaaggttgtatgtcttttttcagcc 2065 Query: 322 tact 325 |||| Sbjct: 2064 tact 2061
>gb|AY147674.1| Xeronema callistemon photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 176 bits (89), Expect = 3e-41 Identities = 116/125 (92%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 2184 aattgactgcattgatctcggtagctacgccacccacggaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || |||||||||||||| || || ||||||||||||||||||||||||||||||| || Sbjct: 2124 catgagtcatatattctgccgaacgtcgttcttgccaaggttgtatgtcttttttcagcc 2065 Query: 322 tactc 326 ||||| Sbjct: 2064 tactc 2060
>gb|AY147661.1| Blandfordia punicea photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 176 bits (89), Expect = 3e-41 Identities = 116/125 (92%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 2184 aattgactgcattgatctcggtagctacgccacccacggaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || |||||||||||||| || || ||||||||||||||||||||||||||||||| || Sbjct: 2124 catgagtcatatattctgccgaacgtcgttcttgccaaggttgtatgtcttttttcagcc 2065 Query: 322 tactc 326 ||||| Sbjct: 2064 tactc 2060
>gb|AY147649.1| Ensete ventricosum photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 176 bits (89), Expect = 3e-41 Identities = 116/125 (92%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 2184 aattgactgcattgatctcggtagctacgccacccacggaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || |||||||||||||| || || ||||||||||||||||||||||||||||||| || Sbjct: 2124 catgagtcatatattctgccgaacgtcgttcttgccaaggttgtatgtcttttttcagcc 2065 Query: 322 tactc 326 ||||| Sbjct: 2064 tactc 2060
>dbj|AB027572.1| Triticum aestivum chloroplast DNA, 21.1-kb fragment bearing RNA polymerase subunit (rpo) genes Length = 21245 Score = 176 bits (89), Expect = 3e-41 Identities = 103/105 (98%), Gaps = 2/105 (1%) Strand = Plus / Minus Query: 1 aaaaaagtagnaacaggtataaataagnaaaatcttagttaagagggttcatgtaaagaa 60 |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 103 aaaaaagtag-aacaggtataaataag-aaaatcttagttaagagggttcatgtaaagaa 46 Query: 61 caggttccaaatcacgatcgattcccttttcaaaacctgctgcag 105 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 45 caggttccaaatcacgatcgattcccttttcaaaacctgctgcag 1
>gb|AF123825.1|AF123825 Liriodendron tulipifera photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2179 Score = 176 bits (89), Expect = 3e-41 Identities = 116/125 (92%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 2179 aattaactgcattgatctcggtagctacgccacccacggaatttaaagaacctaaaggag 2120 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || ||||||||||| || || || ||||||||||||||||||||||||||||||| || Sbjct: 2119 catgagtcatatattccgccgaacgtcgttcttgccaaggttgtatgtcttttttcagcc 2060 Query: 322 tactc 326 ||||| Sbjct: 2059 tactc 2055
>gb|AY705191.1| Epistephium sp. Chase O-432 PsbC (psbC) gene, partial cds; chloroplast Length = 1442 Score = 174 bits (88), Expect = 1e-40 Identities = 112/120 (93%) Strand = Plus / Minus Query: 207 actgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgg 266 ||||||||||||||||| || ||||||||||| ||||||||||||||||||||||| || Sbjct: 1440 actgcattgatctcggtagccacgccacccacagaatttaaagagcctaaaggagcatga 1381 Query: 267 gtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 |||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1380 gtcatatattctgccgaacgccgttcttgccaaggctgtatgtcttttttcaacctactc 1321
>gb|AY705177.1| Erythrorchis cassythoides PsbC (psbC) gene, partial cds; chloroplast Length = 1442 Score = 174 bits (88), Expect = 1e-40 Identities = 112/120 (93%) Strand = Plus / Minus Query: 207 actgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgg 266 ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| Sbjct: 1440 actgcattgatctcggtagctacgccacccacggaatttaaagaacctaaaggagcgtga 1381 Query: 267 gtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 |||||||||||||| || ||||||||||||||||| |||||||||||||| | ||||||| Sbjct: 1380 gtcatatattctgccgaacgccgttcttgccaaggctgtatgtctttttttagcctactc 1321
>gb|AF123827.1|AF123827 Trochodendron aralioides photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2177 Score = 174 bits (88), Expect = 1e-40 Identities = 112/120 (93%) Strand = Plus / Minus Query: 207 actgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgg 266 ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| || Sbjct: 2174 actgcattgatctcggtagctacgccacccacggaatttaaagaacctaaaggagcatga 2115 Query: 267 gtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 ||||||||||| || || |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 2114 gtcatatattccgcggaacgccgttcttgccaaggttgtatgtcttttttcagcctactc 2055
>gb|AF528927.1| Euptelea polyandra photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 172 bits (87), Expect = 4e-40 Identities = 115/125 (92%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 2184 aattgactgcattgatctcggtagctacgccacccacggaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || || |||||||| || || |||||||||||||||||||||||||||||||||| || Sbjct: 2124 catgagtsatatattccgcggaacgccgttcttgccaaggttgtatgtcttttttcagcc 2065 Query: 322 tactc 326 ||||| Sbjct: 2064 tactc 2060
>gb|AY147660.1| Astelia alpina photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 170 bits (86), Expect = 2e-39 Identities = 115/125 (92%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 2184 aattgactgcattgatntcggtagctacgccacccacggaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || |||||||||||||| || || ||||||||||||||||||||||||||||||| || Sbjct: 2124 catgagtcatatattctgccgaacgtcgttcttgccaaggttgtatgtcttttttcagcc 2065 Query: 322 tactc 326 ||||| Sbjct: 2064 tactc 2060
>gb|AY147644.1| Stemona tuberosa photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 170 bits (86), Expect = 2e-39 Identities = 109/117 (93%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||||||||||||||| ||||| ||||| |||||||||||||||||||| |||||||||| Sbjct: 2184 aattaactgcattgatntcggtagctactccacccacggaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttca 318 | || |||||||||||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 2124 catgagtcatatattctgccgagcgtcgttcttgccaaggttgtatgtcttttttca 2068
>gb|AY705184.1| Vanilla roscheri PsbC (psbC) gene, partial cds; chloroplast Length = 1421 Score = 170 bits (86), Expect = 2e-39 Identities = 110/118 (93%) Strand = Plus / Minus Query: 207 actgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgg 266 ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| || Sbjct: 1419 actgcattgatctcggtagctacgccacccacggaatttaaagaacctaaaggagcatga 1360 Query: 267 gtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacctac 324 |||||||||||||| || ||||||||||||||||| |||||||||||||||| ||||| Sbjct: 1359 gtcatatattctgccgaacgccgttcttgccaaggctgtatgtcttttttcagcctac 1302
>gb|AY705181.1| Vanilla africana PsbC (psbC) gene, partial cds; chloroplast Length = 1428 Score = 170 bits (86), Expect = 2e-39 Identities = 110/118 (93%) Strand = Plus / Minus Query: 207 actgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgg 266 ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| || Sbjct: 1426 actgcattgatctcggtagctacgccacccacggaatttaaagaacctaaaggagcatga 1367 Query: 267 gtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacctac 324 |||||||||||||| || ||||||||||||||||| |||||||||||||||| ||||| Sbjct: 1366 gtcatatattctgccgaacgccgttcttgccaaggctgtatgtcttttttcagcctac 1309
>gb|AY705180.1| Vanilla aphylla PsbC (psbC) gene, partial cds; chloroplast Length = 1421 Score = 170 bits (86), Expect = 2e-39 Identities = 110/118 (93%) Strand = Plus / Minus Query: 207 actgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgg 266 ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| || Sbjct: 1419 actgcattgatctcggtagctacgccacccacggaatttaaagaacctaaaggagcatga 1360 Query: 267 gtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacctac 324 |||||||||||||| || ||||||||||||||||| |||||||||||||||| ||||| Sbjct: 1359 gtcatatattctgccgaacgccgttcttgccaaggctgtatgtcttttttcagcctac 1302
>gb|AY147655.1| Talbotia elegans photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 168 bits (85), Expect = 7e-39 Identities = 115/125 (92%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| ||||||||||||||||| || ||||||||||| ||||||||||| |||||||||| Sbjct: 2184 aattgactgcattgatctcggtagccacgccacccacagaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || ||||||||||||||||| ||||| |||||||||||||||||||||||||||| || Sbjct: 2124 catgagtcatatattctgctgaacgccgctcttgccaaggttgtatgtcttttttcagcc 2065 Query: 322 tactc 326 ||||| Sbjct: 2064 tactc 2060
>gb|AY147653.1| Philydrum lanuginosum photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 168 bits (85), Expect = 7e-39 Identities = 115/125 (92%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 2184 aatttactgcattgatctcggtagctacgccacccacggaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || ||||| |||||||| || || ||||||||||||||||||||||||||||||| || Sbjct: 2124 catgagtcatgtattctgccgaacgtcgttcttgccaaggttgtatgtcttttttcagcc 2065 Query: 322 tactc 326 ||||| Sbjct: 2064 tactc 2060
>gb|AY147650.1| Hydrothrix gardneri photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 168 bits (85), Expect = 7e-39 Identities = 115/125 (92%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| ||||||||||||||||| ||||| |||||||||||||||||||| |||||||||| Sbjct: 2184 aattgactgcattgatctcggtagctaccccacccacggaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || |||||||||||||| || || ||||||||||||||||||||||||||||||| || Sbjct: 2124 catgagtcatatattctgccgaacgtcgttcttgccaaggttgtatgtcttttttcagcc 2065 Query: 322 tactc 326 ||||| Sbjct: 2064 tactc 2060
>gb|AF528929.1| Hernandia peltata photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 168 bits (85), Expect = 7e-39 Identities = 115/125 (92%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 2184 aattgactgcattgatctcggtagctacgccacccacggaatttaaagaccctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || ||||||||||| || || || ||||||||||||||||||||||||||||||| || Sbjct: 2124 catgagtcatatattccgccgaacgtcgttcttgccaaggttgtatgtcttttttcagcc 2065 Query: 322 tactc 326 ||||| Sbjct: 2064 tactc 2060
>gb|AF525949.1| Taxodium distichum photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2220 Score = 168 bits (85), Expect = 7e-39 Identities = 124/137 (90%) Strand = Plus / Minus Query: 182 ccaacttctaggagagacataattaactgcattgatctcggtcgctacgccacccacgga 241 |||||||||||| ||||||||||| || ||||| |||||||| | ||| |||||||| || Sbjct: 2220 ccaacttctaggggagacataattgaccgcattaatctcggtaggtacaccacccacaga 2161 Query: 242 atttaaagagcctaaaggagcgtgggtcatatattctgctgagcgccgttcttgccaagg 301 ||||||||| ||||||||||| || ||||||||||||||||| || |||||||||||||| Sbjct: 2160 atttaaagaacctaaaggagcatgagtcatatattctgctgaacgtcgttcttgccaagg 2101 Query: 302 ttgtatgtcttttttca 318 ||||||||||||||||| Sbjct: 2100 ttgtatgtcttttttca 2084
>gb|AF123816.1|AF123816 Calycanthus floridus photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 168 bits (85), Expect = 7e-39 Identities = 109/117 (93%) Strand = Plus / Minus Query: 210 gcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtc 269 |||||||||||||| |||||||||||||||||||||||||| ||||||||||| || ||| Sbjct: 2176 gcattgatctcggtagctacgccacccacggaatttaaagaacctaaaggagcatgagtc 2117 Query: 270 atatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 |||||||| || || || ||||||||||||||||||||||||||||||||||||||| Sbjct: 2116 atatattccgcggaacgtcgttcttgccaaggttgtatgtcttttttcaacctactc 2060
>gb|AF528924.1| Cornus mas photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 167 bits (84), Expect = 3e-38 Identities = 114/124 (91%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| ||||||||||||||||| | |||||||||||| ||||||||||| |||||||||| Sbjct: 2184 aattgactgcattgatctcggtaggtacgccacccacagaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | ||||||||||||||||| || || ||||||||||||||||||||||||||||||| || Sbjct: 2124 catgggtcatatattctgcggaacgtcgttcttgccaaggttgtatgtcttttttcagcc 2065 Query: 322 tact 325 |||| Sbjct: 2064 tact 2061
>gb|AY705200.1| Cleistes sp. Jardim 2579 PsbC (psbC) gene, partial cds; chloroplast Length = 1442 Score = 167 bits (84), Expect = 3e-38 Identities = 111/120 (92%) Strand = Plus / Minus Query: 207 actgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgg 266 ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| || Sbjct: 1440 actgcattgatctcggtggctacgccacccacggaatttaaagaacctaaaggagcatga 1381 Query: 267 gtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 |||||||||||||| || ||||||||||||||||| |||||||||||||| | ||||||| Sbjct: 1380 gtcatatattctgccgaacgccgttcttgccaaggctgtatgtctttttttagcctactc 1321
>gb|AY705199.1| Cleistes cipoana PsbC (psbC) gene, partial cds; chloroplast Length = 1442 Score = 167 bits (84), Expect = 3e-38 Identities = 111/120 (92%) Strand = Plus / Minus Query: 207 actgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgg 266 ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| || Sbjct: 1440 actgcattgatctcggtggctacgccacccacggaatttaaagaacctaaaggagcatga 1381 Query: 267 gtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 |||||||||||||| || ||||||||||||||||| |||||||||||||| | ||||||| Sbjct: 1380 gtcatatattctgccgaacgccgttcttgccaaggctgtatgtctttttttagcctactc 1321
>gb|AY705198.1| Cleistes divaricata PsbC (psbC) gene, partial cds; chloroplast Length = 1442 Score = 167 bits (84), Expect = 3e-38 Identities = 111/120 (92%) Strand = Plus / Minus Query: 207 actgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgg 266 ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| || Sbjct: 1440 actgcattgatctcggtagctacgccacccacggaatttaaagaacctaaaggagcatga 1381 Query: 267 gtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 |||||||||||||| || ||||||||||||||||| |||||||||||||| | ||||||| Sbjct: 1380 gtcatatattctgccgaacgccgttcttgccaaggctgtatgtctttttttagcctactc 1321
>gb|AY705195.1| Epistephium subrepens PsbC (psbC) gene, partial cds; chloroplast Length = 1442 Score = 167 bits (84), Expect = 3e-38 Identities = 111/120 (92%) Strand = Plus / Minus Query: 207 actgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgg 266 ||||||||||||||||| || ||||||||||| ||||||||||| ||||||||||| || Sbjct: 1440 actgcattgatctcggtagccacgccacccacagaatttaaagaacctaaaggagcatga 1381 Query: 267 gtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 |||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1380 gtcatatattctgccgaacgccgttcttgccaaggctgtatgtcttttttcaacctactc 1321
>gb|AY705194.1| Epistephium parviflorum PsbC (psbC) gene, partial cds; chloroplast Length = 1442 Score = 167 bits (84), Expect = 3e-38 Identities = 111/120 (92%) Strand = Plus / Minus Query: 207 actgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgg 266 ||||||||||||||||| || ||||||||||| ||||||||||| ||||||||||| || Sbjct: 1440 actgcattgatctcggtagccacgccacccacagaatttaaagaacctaaaggagcatga 1381 Query: 267 gtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 |||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1380 gtcatatattctgccgaacgccgttcttgccaaggctgtatgtcttttttcaacctactc 1321
>gb|AY705193.1| Epistephium lucidum PsbC (psbC) gene, partial cds; chloroplast Length = 1442 Score = 167 bits (84), Expect = 3e-38 Identities = 111/120 (92%) Strand = Plus / Minus Query: 207 actgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgg 266 ||||||||||||||||| || ||||||||||| ||||||||||| ||||||||||| || Sbjct: 1440 actgcattgatctcggtagccacgccacccacagaatttaaagaacctaaaggagcatga 1381 Query: 267 gtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 |||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1380 gtcatatattctgccgaacgccgttcttgccaaggctgtatgtcttttttcaacctactc 1321
>gb|AY705192.1| Epistephium sp. Chase O-433 PsbC (psbC) gene, partial cds; chloroplast Length = 1442 Score = 167 bits (84), Expect = 3e-38 Identities = 111/120 (92%) Strand = Plus / Minus Query: 207 actgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgg 266 ||||||||||||||||| || ||||||||||| ||||||||||| ||||||||||| || Sbjct: 1440 actgcattgatctcggtagccacgccacccacagaatttaaagaacctaaaggagcatga 1381 Query: 267 gtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 |||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1380 gtcatatattctgccgaacgccgttcttgccaaggctgtatgtcttttttcaacctactc 1321
>gb|AY705178.1| Erythrorchis altissima PsbC-like (psbC) gene, partial sequence; chloroplast Length = 1442 Score = 167 bits (84), Expect = 3e-38 Identities = 111/120 (92%) Strand = Plus / Minus Query: 207 actgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgg 266 ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| || Sbjct: 1440 actgcattgatctcggtagctacgccacccacggaatttaaagaacctaaaggagcatga 1381 Query: 267 gtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 |||||||||||||| || ||||||||||||||||| |||||||||||||| | ||||||| Sbjct: 1380 gtcatatattctgccgaacgccgttcttgccaaggctgtatgtctttttttagcctactc 1321
>gb|AF239785.1| Magnolia stellata photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 167 bits (84), Expect = 3e-38 Identities = 114/124 (91%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||| Sbjct: 2184 aattaactgcattgatctcggtagctacgccacccacagaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || ||||||||||| || || || ||||||||||||||||||||||||||||||| || Sbjct: 2124 catgagtcatatattccgccgaacgtcgttcttgccaaggttgtatgtcttttttcagcc 2065 Query: 322 tact 325 |||| Sbjct: 2064 tact 2061
>gb|AY705188.1| Pseudovanilla ponapensis PsbC (psbC) gene, partial cds; chloroplast Length = 1439 Score = 165 bits (83), Expect = 1e-37 Identities = 104/111 (93%) Strand = Plus / Minus Query: 208 ctgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtggg 267 |||||||||||||||| |||||||||||||||||||||||||| ||||||||||| || | Sbjct: 1439 ctgcattgatctcggtagctacgccacccacggaatttaaagaacctaaaggagcatgag 1380 Query: 268 tcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttca 318 ||||||||||||| || ||||||||||||||||| |||||||||||||||| Sbjct: 1379 tcatatattctgccgaacgccgttcttgccaaggctgtatgtcttttttca 1329
>gb|AY147672.1| Sisyrinchium montanum photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 163 bits (82), Expect = 4e-37 Identities = 114/125 (91%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| |||||||||||||| || | |||||||||||||||||||||||| |||||||||| Sbjct: 2184 aattgactgcattgatctcagtagntacgccacccacggaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || |||||||||||||| || || ||||||||||||||||||||||||||||||| || Sbjct: 2124 catgagtcatatattctgccgaacgtcgttcttgccaaggttgtatgtcttttttcagcc 2065 Query: 322 tactc 326 ||||| Sbjct: 2064 tactc 2060
>gb|AY147669.1| Lanaria lanata photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 163 bits (82), Expect = 4e-37 Identities = 114/125 (91%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| ||||||||||| ||||| | |||||||||||||||||||||||| |||||||||| Sbjct: 2184 aattgactgcattgatttcggtagntacgccacccacggaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || |||||||||||||| || || ||||||||||||||||||||||||||||||| || Sbjct: 2124 catgagtcatatattctgccgaacgtcgttcttgccaaggttgtatgtcttttttcagcc 2065 Query: 322 tactc 326 ||||| Sbjct: 2064 tactc 2060
>gb|AY147652.1| Palisota bogneri photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 163 bits (82), Expect = 4e-37 Identities = 114/125 (91%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| ||||||||||||||||| | |||||||||||| ||||||||||| |||||||||| Sbjct: 2184 aattgactgcattgatctcggtagntacgccacccacagaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || |||||||||||||| || || |||||||||||||| ||||||||||||||||||| Sbjct: 2124 catgagtcatatattctgccgaacgtcgttcttgccaaggctgtatgtcttttttcaacc 2065 Query: 322 tactc 326 ||||| Sbjct: 2064 tactc 2060
>gb|AY705182.1| Vanilla cf. planifolia Chase O-170 PsbC (psbC) gene, partial cds; chloroplast Length = 1421 Score = 163 bits (82), Expect = 4e-37 Identities = 103/110 (93%) Strand = Plus / Minus Query: 207 actgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgg 266 ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| || Sbjct: 1419 actgcattgatctcggtagctacgccacccacggaatttaaagaacctaaaggagcatga 1360 Query: 267 gtcatatattctgctgagcgccgttcttgccaaggttgtatgtctttttt 316 |||||||||||||| || ||||||||||||||||| |||||||||||||| Sbjct: 1359 gtcatatattctgccgaacgccgttcttgccaaggctgtatgtctttttt 1310
>gb|AY705179.1| Vanilla imperialis PsbC (psbC) gene, partial cds; chloroplast Length = 1419 Score = 163 bits (82), Expect = 4e-37 Identities = 109/118 (92%) Strand = Plus / Minus Query: 207 actgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgg 266 ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| || Sbjct: 1419 actgcattgatctcggtagctacgccacccacggaatttaaagaacctaaaggagcatga 1360 Query: 267 gtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacctac 324 ||||| |||||||| || ||||||||||||||||| |||||||||||||||| ||||| Sbjct: 1359 gtcatgtattctgccgaacgccgttcttgccaaggctgtatgtcttttttcagcctac 1302
>gb|AF239776.1| Ascarina lucida photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 163 bits (82), Expect = 4e-37 Identities = 114/125 (91%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| ||||||||||||||||| | |||||||||||||||||||||||| |||||||||| Sbjct: 2184 aattgactgcattgatctcggtagntacgccacccacggaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || ||||||||||| || || || ||||||||||||||||||||||||||||||| || Sbjct: 2124 catgagtcatatattccgccgaacgtcgttcttgccaaggttgtatgtcttttttcagcc 2065 Query: 322 tactc 326 ||||| Sbjct: 2064 tactc 2060
>gb|AY147678.1| Chlorophytum comosum photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 161 bits (81), Expect = 2e-36 Identities = 114/125 (91%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| ||||||||||||||||| ||||||||||| || ||||||||||| |||||||||| Sbjct: 2184 aattgactgcattgatctcggtagctacgccacctacagaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || ||||||||||||||||| || |||||||||||||||||||| |||||||||| || Sbjct: 2124 catgagtcatatattctgctgaacgtcgttcttgccaaggttgtatatcttttttcagcc 2065 Query: 322 tactc 326 ||||| Sbjct: 2064 tactc 2060
>gb|AY147665.1| Cypripedium passerinum photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 161 bits (81), Expect = 2e-36 Identities = 114/125 (91%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| ||||||||||||||||| ||||| |||||||||||||||||||| |||||||||| Sbjct: 2184 aattgactgcattgatctcggtggctacaccacccacggaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || |||||||||||||| || || |||||||||||||| |||||||||||||||| || Sbjct: 2124 catgagtcatatattctgccgaacgtcgttcttgccaaggctgtatgtcttttttcagcc 2065 Query: 322 tactc 326 ||||| Sbjct: 2064 tactc 2060
>gb|AY147663.1| Curculigo capitulata photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 161 bits (81), Expect = 2e-36 Identities = 108/117 (92%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||| | Sbjct: 2184 aattgactgcattgatctcggtagctacgccacccacggaatttaaagaacctaaagggg 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttca 318 | || |||||||||||||| || || ||||||||||||||||||||||||||||||| Sbjct: 2124 catgagtcatatattctgccgaacgtcgttcttgccaaggttgtatgtcttttttca 2068
>gb|AY147662.1| Coelogyne cristata photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 161 bits (81), Expect = 2e-36 Identities = 114/125 (91%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| ||||||||||||||||| |||||||||||||| ||||||||||| |||||||||| Sbjct: 2184 aattgactgcattgatctcggtagctacgccacccacagaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || |||||||||||||| || || |||||||||||||| |||||||||||||||| || Sbjct: 2124 catgagtcatatattctgccgaacgtcgttcttgccaaggctgtatgtcttttttcagcc 2065 Query: 322 tactc 326 ||||| Sbjct: 2064 tactc 2060
>gb|AY147639.1| Scheuchzeria palustris photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 161 bits (81), Expect = 2e-36 Identities = 108/117 (92%) Strand = Plus / Minus Query: 210 gcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtc 269 |||||||||||||| |||||||||||||| ||||||||||| ||||||||||| || ||| Sbjct: 2176 gcattgatctcggtagctacgccacccacagaatttaaagaacctaaaggagcatgagtc 2117 Query: 270 atatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 ||||||||||| || || ||||||||||||||||||||||||||||||| ||||||| Sbjct: 2116 atatattctgccgaacgtcgttcttgccaaggttgtatgtcttttttcagcctactc 2060
>gb|AF528934.1| Phytolacca americana photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 161 bits (81), Expect = 2e-36 Identities = 108/117 (92%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| ||||||||||||||||| | |||||||||||| ||||||||||| |||||||||| Sbjct: 2184 aattgactgcattgatctcggtaggtacgccacccacagaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttca 318 | || ||||||||||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 2124 catgagtcatatattctgctgaacgtcgttcttgccaaggttgtatgtcttttttca 2068
>gb|AF528931.1| Nelumbo lutea photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 161 bits (81), Expect = 2e-36 Identities = 114/125 (91%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 2184 aattgactgcattgatctcggtagctacgccacccacggaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || ||||||||||| || || || ||||||||||||||||||||||||||||| | || Sbjct: 2124 catgagtcatatattccgcggaacgacgttcttgccaaggttgtatgtcttttttaagcc 2065 Query: 322 tactc 326 ||||| Sbjct: 2064 tactc 2060
>gb|AF239777.1| Austrobaileya scandens photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 161 bits (81), Expect = 2e-36 Identities = 114/125 (91%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| |||||||||||||| || |||||||||||||||||||||||||| |||||||||| Sbjct: 2184 aattgactgcattgatctcagtagctacgccacccacggaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || ||||||||||| || || || ||||||||||||||||||||||||||||||| || Sbjct: 2124 catgagtcatatattccgccgaacgtcgttcttgccaaggttgtatgtcttttttcagcc 2065 Query: 322 tactc 326 ||||| Sbjct: 2064 tactc 2060
>gb|AF188854.1|AF188854 Nymphaea odorata photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 161 bits (81), Expect = 2e-36 Identities = 114/125 (91%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| |||||||||||||| || ||||| |||||||||||||||||||| |||||||||| Sbjct: 2184 aattgactgcattgatctctgtagctacaccacccacggaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || ||||||||||| || || || |||||||||||||||||||||||||||||||||| Sbjct: 2124 catgagtcatatattccgccgaacgtcgttcttgccaaggttgtatgtcttttttcaacc 2065 Query: 322 tactc 326 ||||| Sbjct: 2064 tactc 2060
>gb|AF123823.1|AF123823 Illicium parviflorum photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2179 Score = 161 bits (81), Expect = 2e-36 Identities = 114/125 (91%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| |||||||||||||| || |||||||||||||||||||||||||| |||||||||| Sbjct: 2179 aattgactgcattgatctcagtagctacgccacccacggaatttaaagaacctaaaggag 2120 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || ||||||||||| || || || ||||||||||||||||||||||||||||||| || Sbjct: 2119 catgagtcatatattccgccgaacgtcgttcttgccaaggttgtatgtcttttttcagcc 2060 Query: 322 tactc 326 ||||| Sbjct: 2059 tactc 2055
>gb|AF239794.1| Spathiphyllum wallisii photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 161 bits (81), Expect = 2e-36 Identities = 114/125 (91%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| |||||||||||||| || |||||||||||||||||||||||||| |||| ||||| Sbjct: 2184 aattgactgcattgatctcagtagctacgccacccacggaatttaaagaacctagaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 |||| ||||||||||| || || || ||||||||||||||||||||||||||||||| || Sbjct: 2124 cgtgagtcatatattccgccgaacggcgttcttgccaaggttgtatgtcttttttcagcc 2065 Query: 322 tactc 326 ||||| Sbjct: 2064 tactc 2060
>gb|AF239789.1| Sagittaria latifolia photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2185 Score = 161 bits (81), Expect = 2e-36 Identities = 114/125 (91%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| ||||||||||||||||| ||||| |||||||| |||||||| || |||||||||| Sbjct: 2185 aattgactgcattgatctcggtagctacaccacccacagaatttaaggaacctaaaggag 2126 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || |||||||||||||| ||||| ||||||||||||||||||||||||||||||| || Sbjct: 2125 catgagtcatatattctgccgagcgtcgttcttgccaaggttgtatgtcttttttcagcc 2066 Query: 322 tactc 326 ||||| Sbjct: 2065 tactc 2061
>gb|AY147664.1| Cyanastrum cordifolium photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 159 bits (80), Expect = 7e-36 Identities = 113/125 (90%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| ||||||||||| |||| | |||||||||||||||||||||||| |||||||||| Sbjct: 2184 aattgactgcattgatnncggtagntacgccacccacggaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || |||||||||||||| || || ||||||||||||||||||||||||||||||| || Sbjct: 2124 catgagtcatatattctgccgaacgtcgttcttgccaaggttgtatgtcttttttcagcc 2065 Query: 322 tactc 326 ||||| Sbjct: 2064 tactc 2060
>gb|DQ069645.1| Nuphar advena photosystem II 44 kDa protein (psbC) gene, partial cds; chloroplast Length = 1275 Score = 159 bits (80), Expect = 7e-36 Identities = 110/120 (91%) Strand = Plus / Minus Query: 207 actgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgg 266 |||||||||||||| || ||||| |||||||||||||||||||| ||||||||||| || Sbjct: 1271 actgcattgatctctgtagctacaccacccacggaatttaaagaacctaaaggagcatga 1212 Query: 267 gtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 ||||||||||| || || || ||||||||||||||||||||||||||||||||||||||| Sbjct: 1211 gtcatatattccgccgaacgtcgttcttgccaaggttgtatgtcttttttcaacctactc 1152
>gb|AY705211.1| Apostasia stylidioides PsbC (psbC) gene, partial cds; chloroplast Length = 1406 Score = 159 bits (80), Expect = 7e-36 Identities = 95/100 (95%) Strand = Plus / Minus Query: 227 tacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattctgctgagcg 286 |||||||||||||||||||||||| ||||||||||| || ||||||||||||||||| || Sbjct: 1406 tacgccacccacggaatttaaagaacctaaaggagcatgagtcatatattctgctgaacg 1347 Query: 287 ccgttcttgccaaggttgtatgtcttttttcaacctactc 326 ||||||||||||||||||||||||||||||||||||||| Sbjct: 1346 tcgttcttgccaaggttgtatgtcttttttcaacctactc 1307
>gb|AY705206.1| Pogonia ophioglossoides PsbC-like (psbC) gene, partial sequence; chloroplast Length = 1441 Score = 159 bits (80), Expect = 7e-36 Identities = 110/120 (91%) Strand = Plus / Minus Query: 207 actgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgg 266 ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| || Sbjct: 1439 actgcattgatctcggtagctacgccacccacggaatttaaagaacctaacggagcatga 1380 Query: 267 gtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 |||||||||||||| || ||||||||||||||||| |||||||||||||| | ||||||| Sbjct: 1379 gtcatatattctgccgaacgccgttcttgccaaggctgtatgtctttttttagcctactc 1320
>gb|AY705205.1| Pogonia japonica PsbC-like (psbC) gene, partial sequence; chloroplast Length = 1441 Score = 159 bits (80), Expect = 7e-36 Identities = 110/120 (91%) Strand = Plus / Minus Query: 207 actgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgg 266 ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| || Sbjct: 1439 actgcattgatctcggtagctacgccacccacggaatttaaagaacctaacggagcatga 1380 Query: 267 gtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 |||||||||||||| || ||||||||||||||||| |||||||||||||| | ||||||| Sbjct: 1379 gtcatatattctgccgaacgccgttcttgccaaggctgtatgtctttttttagcctactc 1320
>gb|AY705204.1| Pogonia minor PsbC-like (psbC) gene, partial sequence; chloroplast Length = 1441 Score = 159 bits (80), Expect = 7e-36 Identities = 110/120 (91%) Strand = Plus / Minus Query: 207 actgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgg 266 ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| || Sbjct: 1439 actgcattgatctcggtagctacgccacccacggaatttaaagaacctaacggagcatga 1380 Query: 267 gtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 |||||||||||||| || ||||||||||||||||| |||||||||||||| | ||||||| Sbjct: 1379 gtcatatattctgccgaacgccgttcttgccaaggctgtatgtctttttttagcctactc 1320
>gb|AY705203.1| Cleistes rosea PsbC (psbC) gene, partial cds; chloroplast Length = 1442 Score = 159 bits (80), Expect = 7e-36 Identities = 110/120 (91%) Strand = Plus / Minus Query: 207 actgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgg 266 |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||| || Sbjct: 1440 actgcattaatctcggtggctacgccacccacggaatttaaagaacctaaaggagcatga 1381 Query: 267 gtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 |||||||||||||| || ||||||||||||||||| |||||||||||||| | ||||||| Sbjct: 1380 gtcatatattctgccgaacgccgttcttgccaaggctgtatgtctttttttagcctactc 1321
>gb|AY705201.1| Cleistes sp. Chase O-430 PsbC (psbC) gene, partial cds; chloroplast Length = 1442 Score = 159 bits (80), Expect = 7e-36 Identities = 110/120 (91%) Strand = Plus / Minus Query: 207 actgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgg 266 |||||||||||||| || |||||||||||||||||||||||||| ||||||||||| || Sbjct: 1440 actgcattgatctcagtagctacgccacccacggaatttaaagaacctaaaggagcatga 1381 Query: 267 gtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 |||||||||||||| || ||||||||||||||||| |||||||||||||| | ||||||| Sbjct: 1380 gtcatatattctgccgaacgccgttcttgccaaggctgtatgtctttttttagcctactc 1321
>gb|AY705196.1| Isotria medeoloides PsbC (psbC) gene, partial cds; chloroplast Length = 1442 Score = 159 bits (80), Expect = 7e-36 Identities = 110/120 (91%) Strand = Plus / Minus Query: 207 actgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgg 266 ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| || Sbjct: 1440 actgcattgatctcggtggctacgccacccacggaatttaaagaacctaagggagcatga 1381 Query: 267 gtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 |||||||||||||| || ||||||||||||||||| |||||||||||||| | ||||||| Sbjct: 1380 gtcatatattctgccgaacgccgttcttgccaaggctgtatgtctttttttagcctactc 1321
>gb|AY705190.1| Clematepistephium smilacifolium PsbC (psbC) gene, partial cds; chloroplast Length = 1429 Score = 159 bits (80), Expect = 7e-36 Identities = 110/120 (91%) Strand = Plus / Minus Query: 207 actgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgg 266 |||||||||||||| || | |||||||||||||||||||||||| ||||||||||| || Sbjct: 1427 actgcattgatctcagtagttacgccacccacggaatttaaagaacctaaaggagcatga 1368 Query: 267 gtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 |||||||||||||| || ||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 1367 gtcatatattctgccgaacgccgttcttgccaaggctgtatgtcttttttcagcctactc 1308
>gb|AF462401.1| Cedrus deodara photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2222 Score = 159 bits (80), Expect = 7e-36 Identities = 137/156 (87%) Strand = Plus / Minus Query: 165 aaatgagaagttgataaccaacttctaggagagacataattaactgcattgatctcggtc 224 |||||||| || ||||||||||||| |||||||||||||| || |||||||| ||||| Sbjct: 2221 aaatgagaggtggataaccaacttcggggagagacataattcaccgcattgatttcggta 2162 Query: 225 gctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattctgctgag 284 ||||| |||||||| ||||||||||| ||||||||||| || |||||||||||||| || Sbjct: 2161 gctacaccacccacagaatttaaagaacctaaaggagcatgagtcatatattctgccgaa 2102 Query: 285 cgccgttcttgccaaggttgtatgtcttttttcaac 320 || ||||| |||||||| |||||||||||| ||||| Sbjct: 2101 cgtcgttcctgccaaggctgtatgtcttttctcaac 2066
>gb|AF123813.1|AF123813 Acorus calamus photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2181 Score = 159 bits (80), Expect = 7e-36 Identities = 110/120 (91%) Strand = Plus / Minus Query: 207 actgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgg 266 ||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||| || Sbjct: 2177 actgcattgatctcggtagctacaccacccacggaatttaaagaccctaaaggagcatga 2118 Query: 267 gtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 ||||||||||| || || || ||||||||||||||||||||||||||||||| ||||||| Sbjct: 2117 gtcatatattccgccgaacgtcgttcttgccaaggttgtatgtcttttttcagcctactc 2058
>gb|AF239791.1| Schisandra chinensis photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 159 bits (80), Expect = 7e-36 Identities = 113/124 (91%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| ||||||||||||||||| |||||||||||||| ||||||||||| |||||||||| Sbjct: 2184 aattgactgcattgatctcggtagctacgccacccacagaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || ||||||||||| || || || ||||||||||||||||||||||||||||||| || Sbjct: 2124 catgagtcatatattccgccgaacgtcgttcttgccaaggttgtatgtcttttttcagcc 2065 Query: 322 tact 325 |||| Sbjct: 2064 tact 2061
>gb|AY147667.1| Iris missouriensis photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 157 bits (79), Expect = 3e-35 Identities = 113/125 (90%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| ||||||||||| | || |||||||||||||||||||||||||| |||||||||| Sbjct: 2184 aattgactgcattgatnncagtagctacgccacccacggaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || |||||||||||||| || || ||||||||||||||||||||||||||||||| || Sbjct: 2124 catgagtcatatattctgccgaacgtcgttcttgccaaggttgtatgtcttttttcagcc 2065 Query: 322 tactc 326 ||||| Sbjct: 2064 tactc 2060
>gb|AF528936.1| Platanus occidentalis photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 157 bits (79), Expect = 3e-35 Identities = 113/125 (90%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| |||||||||||||| || | |||||||||||||||||||||||| |||||||||| Sbjct: 2184 aattgactgcattgatctctgtagntacgccacccacggaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || ||||| ||||| || || |||||||||||||||||||||||||||||||||| || Sbjct: 2124 catgagtcatntattccgcggaacgccgttcttgccaaggttgtatgtcttttttcagcc 2065 Query: 322 tactc 326 ||||| Sbjct: 2064 tactc 2060
>gb|AY936348.1| Cuscuta sandwichiana PsaB (psaB) and Rps14 (rps14) genes, complete cds; tRNA-Met and tRNA-Gly genes, complete sequence; Ycf9 (ycf9) gene, complete cds; tRNA-Ser gene, complete sequence; PsbC (psbC) and PsbD (psbD) genes, complete cds; tRNA-Thr, tRNA-Glu, tRNA-Tyr, and tRNA-Asp genes, complete sequence; and PsbM (psbM) gene, complete cds; chloroplast Length = 7350 Score = 157 bits (79), Expect = 3e-35 Identities = 220/267 (82%) Strand = Plus / Plus Query: 55 aaagaacaggttccaaatcacgatcgattcccttttcaaaacctgctgcagcagctcggg 114 ||||||| ||||| ||||| ||||| ||||| || ||||| || ||||| || || || | Sbjct: 3699 aaagaaccggttcgaaatcccgatcaattcctttctcaaacccagctgccgccgcccgag 3758 Query: 115 ctcttcctgcatgccataaatggcccacaaaaaagaagaatcctagaacaaaatgagaag 174 | | || || ||||| ||||| || ||||||||||| ||||||||| |||||| || | Sbjct: 3759 cccggcccgcgtgccacaaatgaccaacaaaaaagaaaaatcctagacaaaaatgtgagg 3818 Query: 175 ttgataaccaacttctaggagagacataattaactgcattgatctcggtcgctacgccac 234 ||| ||||||||||| |||||||||||||| |||||||| || || || || || || | Sbjct: 3819 ttgccaaccaacttcttggagagacataattgactgcatttatttcagtagccacacctc 3878 Query: 235 ccacggaatttaaagagcctaaaggagcgtgggtcatatattctgctgagcgccgttctt 294 | || ||||||||||| |||||||| || || |||||||||||||| || |||||||| | Sbjct: 3879 cgacagaatttaaagaacctaaaggggcatgagtcatatattctgcggaacgccgttcct 3938 Query: 295 gccaaggttgtatgtcttttttcaacc 321 ||||||||||||| |||||||| |||| Sbjct: 3939 gccaaggttgtatatctttttttaacc 3965
>gb|AY147646.1| Ananas comosus photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2146 Score = 155 bits (78), Expect = 1e-34 Identities = 112/125 (89%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| ||||||||||| ||||| | |||||||||||||||||||||||| |||||||||| Sbjct: 2146 aattgactgcattgatntcggtagntacgccacccacggaatttaaagaacctaaaggag 2087 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || |||||||||| || || || ||||||||||||||||||||||||||||||| || Sbjct: 2086 catgagtcatatattntgntgnacgtcgttcttgccaaggttgtatgtcttttttcagcc 2027 Query: 322 tactc 326 ||||| Sbjct: 2026 tactc 2022
>gb|AY147645.1| Zigadenus elegans photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 155 bits (78), Expect = 1e-34 Identities = 111/122 (90%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| ||||| ||||| || || |||||||||||||||||||||||||| |||||||||| Sbjct: 2184 aattgactgcgttgatttcagtagctacgccacccacggaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || |||||||||||||| || |||||||||||||||||||||||||||||||||| || Sbjct: 2124 catgagtcatatattctgccgaacgccgttcttgccaaggttgtatgtcttttttcagcc 2065 Query: 322 ta 323 || Sbjct: 2064 ta 2063
>gb|AY705197.1| Isotria verticillata PsbC-like (psbC) gene, partial sequence; chloroplast Length = 1436 Score = 155 bits (78), Expect = 1e-34 Identities = 102/110 (92%) Strand = Plus / Minus Query: 207 actgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgg 266 ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| || Sbjct: 1434 actgcattgatctcggtggctacgccacccacggaatttaaagaacctaagggagcatga 1375 Query: 267 gtcatatattctgctgagcgccgttcttgccaaggttgtatgtctttttt 316 |||||||||||||| || ||||||||||||||||| |||||||||||||| Sbjct: 1374 gtcatatattctgccgaacgccgttcttgccaaggctgtatgtctttttt 1325
>gb|AY147684.1| Yucca glauca photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 153 bits (77), Expect = 4e-34 Identities = 113/125 (90%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| ||||||||||||||||| ||||||||||| || ||||||||||| |||||||||| Sbjct: 2184 aattgactgcattgatctcggtagctacgccacctaccgaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || |||||||||||||| || || |||||||||||||||||||| |||||||||| || Sbjct: 2124 catgagtcatatattctgccgaacgtcgttcttgccaaggttgtatatcttttttcagcc 2065 Query: 322 tactc 326 ||||| Sbjct: 2064 tactc 2060
>gb|AY147676.1| Aphyllanthes monspeliensis photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 153 bits (77), Expect = 4e-34 Identities = 107/117 (91%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| ||||||||||||||||| ||||||||||| || ||||||||||| |||||||||| Sbjct: 2184 aattcactgcattgatctcggtagctacgccacctacagaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttca 318 | || |||||||||||||| ||||| |||||||||||||||||||| |||||||||| Sbjct: 2124 catgagtcatatattctgccgagcgtcgttcttgccaaggttgtatatcttttttca 2068
>gb|AY147647.1| Cartonema philydroides photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 153 bits (77), Expect = 4e-34 Identities = 113/125 (90%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 2184 aattgactgcattgatttcggtagctacgccacccacggaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || |||||||||||||| || || ||||||||||| || |||||||||||||||| || Sbjct: 2124 catgagtcatatattctgccgaacgtcgttcttgccacggctgtatgtcttttttcagcc 2065 Query: 322 tactc 326 ||||| Sbjct: 2064 tactc 2060
>gb|AF528938.1| Saruma henryi photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 153 bits (77), Expect = 4e-34 Identities = 113/125 (90%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| ||||||||||||||||| | |||||||||||| ||||||||||| |||||||||| Sbjct: 2184 aattgactgcattgatctcggtaggtacgccacccacagaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || |||||||| || || ||||| ||||||||||||||||||||||||||||||| || Sbjct: 2124 catgagtcatatactccgcagagcgtcgttcttgccaaggttgtatgtcttttttcagcc 2065 Query: 322 tactc 326 ||||| Sbjct: 2064 tactc 2060
>gb|AF528935.1| Piper betle photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 153 bits (77), Expect = 4e-34 Identities = 107/117 (91%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 2184 aattgactgcattgatctcggtagctacgccacccacggaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttca 318 | || |||||||| ||||| || || ||||||||||||||||||||||| ||||||| Sbjct: 2124 catgagtcatatactctgcggaacgtcgttcttgccaaggttgtatgtcctttttca 2068
>gb|AF528932.1| Pachysandra terminalis photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 153 bits (77), Expect = 4e-34 Identities = 107/117 (91%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| |||||||||||||| || |||||||||||||||||||||||||| |||||||| | Sbjct: 2184 aattgactgcattgatctctgtagctacgccacccacggaatttaaagaacctaaagggg 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttca 318 | || ||||||||||| || || |||||||||||||||||||||||||||||||||| Sbjct: 2124 catgagtcatatattccgcggaacgccgttcttgccaaggttgtatgtcttttttca 2068
>gb|AF123815.1|AF123815 Cabomba caroliniana photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 153 bits (77), Expect = 4e-34 Identities = 113/125 (90%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| |||||||||||||| || ||||| |||||||||||||||||||| || || |||| Sbjct: 2184 aattgactgcattgatctccgtagctacaccacccacggaatttaaagaacccaacggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || |||||||||||||| || || |||||||||||||||||||||||||||||||||| Sbjct: 2124 catgagtcatatattctgccgaacgtcgttcttgccaaggttgtatgtcttttttcaacc 2065 Query: 322 tactc 326 ||||| Sbjct: 2064 tactc 2060
>gb|AF528922.1| Canella winterana photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 151 bits (76), Expect = 2e-33 Identities = 103/112 (91%) Strand = Plus / Minus Query: 207 actgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgg 266 ||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||| || Sbjct: 2179 actgcattgatctcggtagctacgccacccacagaatttaaagaacctaaaggagcatga 2120 Query: 267 gtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttca 318 ||||||||||| || || || ||||||||||||||||||||||||||||||| Sbjct: 2119 gtcatatattccgccgaacgtcgttcttgccaaggttgtatgtcttttttca 2068
>gb|AY705202.1| Cleistes sp. Thomas 12975 PsbC-like (psbC) gene, partial sequence; chloroplast Length = 1441 Score = 151 bits (76), Expect = 2e-33 Identities = 109/120 (90%) Strand = Plus / Minus Query: 207 actgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgg 266 |||||||| || ||||| |||||||||||||||||||||||||| ||||||||||| || Sbjct: 1439 actgcattaatttcggtagctacgccacccacggaatttaaagaacctaaaggagcatga 1380 Query: 267 gtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 |||||||||||||| || ||||||||||||||||| |||||||||||||| | ||||||| Sbjct: 1379 gtcatatattctgccgaacgccgttcttgccaaggctgtatgtctttttttagcctactc 1320
>gb|AF123818.1|AF123818 Cercidiphyllum japonicum photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2157 Score = 151 bits (76), Expect = 2e-33 Identities = 94/100 (94%) Strand = Plus / Minus Query: 227 tacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattctgctgagcg 286 |||||||||||||||||||||||| ||||||||||| || |||||||||||||| || || Sbjct: 2157 tacgccacccacggaatttaaagaacctaaaggagcatgagtcatatattctgcggaacg 2098 Query: 287 ccgttcttgccaaggttgtatgtcttttttcaacctactc 326 |||||||||||||||||||||||||||||||| ||||||| Sbjct: 2097 ccgttcttgccaaggttgtatgtcttttttcagcctactc 2058
>gb|AY147657.1| Xiphidium caeruleum photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 149 bits (75), Expect = 7e-33 Identities = 112/125 (89%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||||||||||||||| ||||| | ||||||||| |||||||||||||| |||||||| | Sbjct: 2184 aattaactgcattgatntcggtagntacgccacctacggaatttaaagaacctaaagggg 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | ||||||||||||||||| || || |||||||||||||| |||||||| ||||||| || Sbjct: 2124 catgggtcatatattctgccgaacgtcgttcttgccaaggctgtatgtcctttttcagcc 2065 Query: 322 tactc 326 ||||| Sbjct: 2064 tactc 2060
>gb|AY147640.1| Tofieldia glutinosa photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 149 bits (75), Expect = 7e-33 Identities = 112/125 (89%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| ||||||||||| ||||| | ||||||||| |||||||||||||| |||||||||| Sbjct: 2184 aattgactgcattgatntcggtagntacgccaccaacggaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || ||||||||||| || || || ||||||||||||||||||||||||||||||| || Sbjct: 2124 catgagtcatatattccgccgaacgtcgttcttgccaaggttgtatgtcttttttcagcc 2065 Query: 322 tactc 326 ||||| Sbjct: 2064 tactc 2060
>gb|AY147658.1| Alania endlicheri photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 147 bits (74), Expect = 3e-32 Identities = 106/117 (90%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| ||||||||||||||||| | |||||||||||||||||||||||| |||||||| | Sbjct: 2184 aattgactgcattgatctcggtagntacgccacccacggaatttaaagaacctaaagggg 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttca 318 | || |||||||||||||| || || |||||||||||||| |||||||||||||||| Sbjct: 2124 catgagtcatatattctgccgaacgtcgttcttgccaaggctgtatgtcttttttca 2068
>gb|AY147651.1| Mayaca fluviatilis photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 147 bits (74), Expect = 3e-32 Identities = 112/125 (89%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| |||||||| || || || |||||||||||||||||||||||||||||||| |||| Sbjct: 2184 aattgactgcatttatntcagtagctacgccacccacggaatttaaagagcctaagggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || |||||||||||||| || || |||||||||||||||||||| |||||||||| || Sbjct: 2124 catgagtcatatattctgccgaacgtcgttcttgccaaggttgtatatcttttttcagcc 2065 Query: 322 tactc 326 ||||| Sbjct: 2064 tactc 2060
>gb|AY147638.1| Butomus umbellatus photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 147 bits (74), Expect = 3e-32 Identities = 112/125 (89%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| ||||||||||||||||| | ||| |||||||| ||||||||||| |||||||||| Sbjct: 2184 aattgactgcattgatctcggtagntacaccacccacagaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || ||||||||||| || || || ||||||||||||||||||||||||||||||| || Sbjct: 2124 catgagtcatatattcggccgaacgtcgttcttgccaaggttgtatgtcttttttcagcc 2065 Query: 322 tactc 326 ||||| Sbjct: 2064 tactc 2060
>gb|AF123826.1|AF123826 Saururus cernuus photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2180 Score = 147 bits (74), Expect = 3e-32 Identities = 107/118 (90%) Strand = Plus / Minus Query: 207 actgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgg 266 ||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||| || Sbjct: 2177 actgcattgatctcggtagctacgccacccacagaatttaaagaacctaaaggagcatga 2118 Query: 267 gtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacctac 324 |||||||| || || || || ||||||||||||||||||||||||||||||| ||||| Sbjct: 2117 gtcatatactccgcggaacgtcgttcttgccaaggttgtatgtcttttttcagcctac 2060
>gb|AY147683.1| Narcissus elegans photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 145 bits (73), Expect = 1e-31 Identities = 112/125 (89%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| ||||||||||||||||| ||||||||||| || ||||||||||| |||||||||| Sbjct: 2184 aattgactgcattgatctcggtagctacgccacctacagaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || |||||||||||||| || || |||||||||||||| ||||| |||||||||| || Sbjct: 2124 catgagtcatatattctgccgaacgtcgttcttgccaaggctgtatatcttttttcagcc 2065 Query: 322 tactc 326 ||||| Sbjct: 2064 tactc 2060
>gb|AY147682.1| Muscari comosum photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 145 bits (73), Expect = 1e-31 Identities = 112/125 (89%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| ||||||||||||||||| ||||||||||| || ||||||||||| |||||||| | Sbjct: 2184 aattgactgcattgatctcggtagctacgccacctacagaatttaaagaacctaaagggg 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || ||||||||||||||||| ||||| ||||||||||||||||| |||||||| | || Sbjct: 2124 catgagtcatatattctgctgaacgccgctcttgccaaggttgtatatctttttttagcc 2065 Query: 322 tactc 326 ||||| Sbjct: 2064 tactc 2060
>gb|AY147681.1| Muilla maritima photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 145 bits (73), Expect = 1e-31 Identities = 112/125 (89%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| ||||||||||||||||| |||||||| || || ||||||||||| |||||||||| Sbjct: 2184 aattgactgcattgatctcggtagctacgccccctacagaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || ||||||||||| ||||| || |||||||||||||||||||| |||||||||| || Sbjct: 2124 catgagtcatatattccgctgaacgtcgttcttgccaaggttgtatatcttttttcagcc 2065 Query: 322 tactc 326 ||||| Sbjct: 2064 tactc 2060
>gb|AY147679.1| Lomandra longifolia photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 145 bits (73), Expect = 1e-31 Identities = 106/117 (90%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| ||||||||||| ||||| ||||||||||| || ||||||||||| |||||||||| Sbjct: 2184 aattgactgcattgatttcggtagctacgccacctacagaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttca 318 | || ||||||||||||||||| || |||||||||||||||||||| |||||||||| Sbjct: 2124 catgagtcatatattctgctgaacgtcgttcttgccaaggttgtatatcttttttca 2068
>gb|AY147673.1| Xanthorrhoea resinosa photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 145 bits (73), Expect = 1e-31 Identities = 112/125 (89%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| ||||||||||||||||| ||||| ||||| || ||||||||||| |||||||||| Sbjct: 2184 aattgactgcattgatctcggtagctacaccacctacagaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || |||||||||||||| || || |||||||||||||||||||| |||||||||| || Sbjct: 2124 catgagtcatatattctgccgaacgtcgttcttgccaaggttgtatatcttttttcagcc 2065 Query: 322 tactc 326 ||||| Sbjct: 2064 tactc 2060
>gb|AF528942.1| Thuja plicata photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 145 bits (73), Expect = 1e-31 Identities = 106/117 (90%) Strand = Plus / Minus Query: 210 gcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtc 269 ||||| |||||||| ||||| || ||||| ||||||||||| ||||||||||| || ||| Sbjct: 2176 gcattaatctcggtagctacaccgcccacagaatttaaagaacctaaaggagcatgagtc 2117 Query: 270 atatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 |||||||||||||| || ||||||||||||||||||||||||||||||||| ||||| Sbjct: 2116 atatattctgctgaacgtcgttcttgccaaggttgtatgtcttttttcaacttactc 2060
>gb|AF528941.1| Tasmannia lanceolata photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 145 bits (73), Expect = 1e-31 Identities = 106/117 (90%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| |||||||||||||| || |||||||||||||| ||||||||||| |||||||||| Sbjct: 2184 aattgactgcattgatctctgtagctacgccacccacagaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttca 318 | || ||||||||||| || || || ||||||||||||||||||||||||||||||| Sbjct: 2124 catgagtcatatattccgccgaacgtcgttcttgccaaggttgtatgtcttttttca 2068
>gb|AF528939.1| Spinacia oleracea photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 145 bits (73), Expect = 1e-31 Identities = 106/117 (90%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| ||||||||||||||||| || || |||||||| ||||||||||| |||||||||| Sbjct: 2184 aattgactgcattgatctcggtagccaccccacccacagaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttca 318 | || ||||||||||||||||| || |||||||||||||||||||| |||||||||| Sbjct: 2124 catgagtcatatattctgctgaacgtcgttcttgccaaggttgtatatcttttttca 2068
>gb|AF528920.1| Aristolochia macrophylla photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 145 bits (73), Expect = 1e-31 Identities = 106/117 (90%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||| | Sbjct: 2184 aattgactgcattgatctcggtagctacgccacccacggaatttaaagaacctaaagggg 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttca 318 | || |||||||| || || || || ||||||||||||||||||||||||||||||| Sbjct: 2124 catgagtcatatactccgcagaacgtcgttcttgccaaggttgtatgtcttttttca 2068
>gb|AF525948.1| Taxus brevifolia photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2207 Score = 145 bits (73), Expect = 1e-31 Identities = 112/125 (89%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| |||||||||||||| || |||||||| ||||||||||||||||| |||||||||| Sbjct: 2207 aattgactgcattgatctctgtagctacgccgcccacggaatttaaagaacctaaaggag 2148 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || ||||||||||| ||||| || ||||||||||| ||||||||||| ||||||||| Sbjct: 2147 catgagtcatatattccgctgaacgtcgttcttgccagggttgtatgtcctttttcaact 2088 Query: 322 tactc 326 ||||| Sbjct: 2087 tactc 2083
>gb|AF123824.1|AF123824 Lactoris fernandeziana photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2180 Score = 145 bits (73), Expect = 1e-31 Identities = 112/125 (89%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 2180 aattgactgcattgatctcggtagctacgccacccacggaatttaaagaacctaaaggag 2121 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || |||||||| || || || || | |||||||||||||||||| |||||||||| || Sbjct: 2120 catgagtcatatactccgcagaacgtctttcttgccaaggttgtatatcttttttcagcc 2061 Query: 322 tactc 326 ||||| Sbjct: 2060 tactc 2056
>ref|XM_475050.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 954 Score = 143 bits (72), Expect = 4e-31 Identities = 84/88 (95%) Strand = Plus / Minus Query: 35 ttagttaagagggttcatgtaaagaacaggttccaaatcacgatcgattcccttttcaaa 94 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 954 ttagttaagaggggtcatgtaaagaacaggctccaaatcacgatcgattcccttttcaaa 895 Query: 95 acctgctgcagcagctcgggctcttcct 122 |||||||||||||| |||||||||||| Sbjct: 894 tcctgctgcagcagcccgggctcttcct 867
>gb|AY705183.1| Vanilla cf. barbellata Chase O-591 PsbC (psbC) gene, partial cds; chloroplast Length = 1401 Score = 143 bits (72), Expect = 4e-31 Identities = 93/100 (93%) Strand = Plus / Minus Query: 225 gctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattctgctgag 284 |||||||||||||||||||||||||| ||||||||||| || |||||||||||||| || Sbjct: 1401 gctacgccacccacggaatttaaagaacctaaaggagcatgagtcatatattctgccgaa 1342 Query: 285 cgccgttcttgccaaggttgtatgtcttttttcaacctac 324 ||||||||||||||||| |||||||||||||||| ||||| Sbjct: 1341 cgccgttcttgccaaggctgtatgtcttttttcagcctac 1302
>gb|AF123820.1|AF123820 Drimys winteri photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2161 Score = 143 bits (72), Expect = 4e-31 Identities = 102/112 (91%) Strand = Plus / Minus Query: 207 actgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgg 266 |||||||||||||| || |||||||||||||| ||||||||||| ||||||||||| || Sbjct: 2157 actgcattgatctctgtagctacgccacccacagaatttaaagaacctaaaggagcatga 2098 Query: 267 gtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttca 318 ||||||||||| || || || ||||||||||||||||||||||||||||||| Sbjct: 2097 gtcatatattccgccgaacgtcgttcttgccaaggttgtatgtcttttttca 2046
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 143 bits (72), Expect = 4e-31 Identities = 195/236 (82%) Strand = Plus / Plus Query: 81 attcccttttcaaaacctgctgcagcagctcgggctcttcctgcatgccataaatggccc 140 ||||| ||||||||||| ||||| ||||| || |||||||| |||||||| || || | Sbjct: 60633 attcctttttcaaaaccagctgctgcagcacgagctcttccagcatgccacaagtgagca 60692 Query: 141 acaaaaaagaagaatcctagaacaaaatgagaagttgataaccaacttctaggagagaca 200 || || || |||||||| ||||||||||||||||||||||||||||| | |||||| || Sbjct: 60693 acgaagaaaaagaatccaagaacaaaatgagaagttgataaccaactacgaggagaaacg 60752 Query: 201 taattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaagga 260 || ||||| ||||| || || || ||||| ||||| || ||||||||||| || | ||| Sbjct: 60753 tagttaacagcattaatttcagtagctacaccaccaacagaatttaaagatccaagtgga 60812 Query: 261 gcgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtctttttt 316 ||||| ||||| ||||| ||||| || | |||||||||||| || || |||||||| Sbjct: 60813 gcgtgagtcatgtattcagctgaacgtctttcttgccaaggctgaatatctttttt 60868
>gb|AY147670.1| Orchis rotundifolia photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 141 bits (71), Expect = 2e-30 Identities = 105/117 (89%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| |||||||| |||||||| | |||||||||||||||||||||||| |||||||||| Sbjct: 2184 aattgactgcatttatctcggtagntacgccacccacggaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttca 318 | || |||||||||| ||| || ||||||||||||||||| ||||||| |||||||| Sbjct: 2124 catgagtcatatattttgccgaacgccgttcttgccaaggctgtatgtnttttttca 2068
>gb|AF528928.1| Houttuynia cordata photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 141 bits (71), Expect = 2e-30 Identities = 110/123 (89%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| ||||||||||||||||| | |||||||||||||||||||||||| |||||||| | Sbjct: 2184 aattgactgcattgatctcggtaggtacgccacccacggaatttaaagaacctaaagggg 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || |||||||| || || || || ||||||||||||||||||||||||||||||| || Sbjct: 2124 catgagtcatatactccgcggaacgtcgttcttgccaaggttgtatgtcttttttcagcc 2065 Query: 322 tac 324 ||| Sbjct: 2064 tac 2062
>gb|AY147680.1| Smilacina racemosa photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 139 bits (70), Expect = 6e-30 Identities = 105/117 (89%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| ||||||||||||||||| | ||||||||| || ||||||||||| |||||||||| Sbjct: 2184 aattgactgcattgatctcggtagntacgccacctacagaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttca 318 | || |||||||||||||| || || |||||||||||||||||||| |||||||||| Sbjct: 2124 catgagtcatatattctgccgaacgtcgttcttgccaaggttgtatatcttttttca 2068
>gb|AY147677.1| Asparagus officinalis photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 139 bits (70), Expect = 6e-30 Identities = 111/125 (88%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| ||||||||||| ||||| | ||||||||| || ||||||||||| |||||||||| Sbjct: 2184 aattgactgcattgatttcggtagntacgccacctacagaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || |||||||||||||| || || |||||||||||||||||||| |||||||||| || Sbjct: 2124 catgagtcatatattctgccgaacgtcgttcttgccaaggttgtatatcttttttcagcc 2065 Query: 322 tactc 326 ||||| Sbjct: 2064 tactc 2060
>gb|AY147648.1| Dasypogon hookeri photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 139 bits (70), Expect = 6e-30 Identities = 111/125 (88%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| ||||||||||||||||| | ||| || |||||||||||||| || |||||||| | Sbjct: 2184 aattgactgcattgatctcggtagntacaccgcccacggaatttaacgaacctaaagggg 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || |||||||||||||| || ||||| |||||||||||||||||||||||||||| || Sbjct: 2124 catgagtcatatattctgccgaacgccgctcttgccaaggttgtatgtcttttttcagcc 2065 Query: 322 tactc 326 ||||| Sbjct: 2064 tactc 2060
>gb|AY147642.1| Narthecium ossifragum photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 139 bits (70), Expect = 6e-30 Identities = 105/118 (88%) Strand = Plus / Minus Query: 209 tgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggt 268 ||||||||| ||||| | || ||||||||||||| |||||| ||||||||||| || || Sbjct: 2177 tgcattgatttcggtagntangccacccacggaanntaaagaacctaaaggagcatgagt 2118 Query: 269 catatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 |||||||||||| || || ||||||||||||||||||||||||||||||| ||||||| Sbjct: 2117 catatattctgccgaacgtcgttcttgccaaggttgtatgtcttttttcagcctactc 2060
>gb|AY147659.1| Asphodelus albus photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 137 bits (69), Expect = 2e-29 Identities = 111/125 (88%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| ||||||||||||||||| ||||| ||||| || ||||||||||| |||||||||| Sbjct: 2184 aattgactgcattgatctcggtagctacaccacctacagaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || |||||||||||||| || || |||||||||||||||||||| || ||||||| || Sbjct: 2124 catgagtcatatattctgccgaacgtcgttcttgccaaggttgtatatcctttttcagcc 2065 Query: 322 tactc 326 ||||| Sbjct: 2064 tactc 2060
>gb|AF528925.1| Cunninghamia lanceolata photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 137 bits (69), Expect = 2e-29 Identities = 111/125 (88%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| |||||||||||||| || |||||||| ||||||||||||||||| |||||||||| Sbjct: 2184 aattgactgcattgatctctgtagctacgccgcccacggaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || ||||||||||| || || || ||||||||||| || |||||||||||||||| || Sbjct: 2124 catgagtcatatattccgccgaacgtcgttcttgccagggctgtatgtcttttttcagcc 2065 Query: 322 tactc 326 ||||| Sbjct: 2064 tactc 2060
>gb|AF462406.1| Metasequoia glyptostroboides photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 137 bits (69), Expect = 2e-29 Identities = 105/117 (89%) Strand = Plus / Minus Query: 210 gcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtc 269 ||||| |||||||| ||||| |||||||| ||||||||||| ||||||||||| || ||| Sbjct: 2176 gcattaatctcggtagctacaccacccacagaatttaaagaacctaaaggagcatgagtc 2117 Query: 270 atatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 |||||||||||||| || | ||||||||| ||||||||||||||||||||| ||||| Sbjct: 2116 atatattctgctgaacgtctttcttgccagggttgtatgtcttttttcaacttactc 2060
>gb|AF235043.1|AF235043 Amborella trichopoda photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 137 bits (69), Expect = 2e-29 Identities = 111/125 (88%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| |||||||||||||| || |||||||| ||||||||||||||||| |||||||||| Sbjct: 2184 aattgactgcattgatctctgtagctacgccgcccacggaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || ||||||||||| || || || ||||||||||| || |||||||||||||||| || Sbjct: 2124 catgagtcatatattccgccgaacgtcgttcttgccagggctgtatgtcttttttcagcc 2065 Query: 322 tactc 326 ||||| Sbjct: 2064 tactc 2060
>gb|AF528921.1| Mahonia aquifolium photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 135 bits (68), Expect = 1e-28 Identities = 109/124 (87%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| ||||||||||| || || | ||| |||||||| ||||||||||| ||||| || | Sbjct: 2184 aattgactgcattgatntcagtagntacaccacccacngaatttaaagaacctaagggcg 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || |||||||||| ||| || ||||||||||||||||||||||||||||||||||||| Sbjct: 2124 catgagtcatatattntgcagaacgccgttcttgccaaggttgtatgtcttttttcaacc 2065 Query: 322 tact 325 |||| Sbjct: 2064 tact 2061
>gb|AF123814.1|AF123814 Asarum canadense photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2164 Score = 135 bits (68), Expect = 1e-28 Identities = 103/115 (89%) Strand = Plus / Minus Query: 212 attgatctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcat 271 |||||||||||| | |||||||||||| ||||||||||| ||||||||||| || ||||| Sbjct: 2164 attgatctcggtagntacgccacccacagaatttaaagaacctaaaggagcatgagtcat 2105 Query: 272 atattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 ||| || || || || ||||||||||||||||||||||||||||||| ||||||| Sbjct: 2104 atactccgcagaacgtcgttcttgccaaggttgtatgtcttttttcagcctactc 2050
>gb|AY147675.1| Allium textile photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 133 bits (67), Expect = 4e-28 Identities = 110/125 (88%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 ||||||||||||| || ||||| | ||||||||| || ||||||||||| |||||||||| Sbjct: 2184 aattaactgcatttatntcggtagntacgccacctacagaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || ||||||||||| || || || |||||||||||||||||||| |||||||||| || Sbjct: 2124 catgagtcatatattccgccgaacgtcgttcttgccaaggttgtatatcttttttcagcc 2065 Query: 322 tactc 326 ||||| Sbjct: 2064 tactc 2060
>gb|AF528919.1| Agathis robusta photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2222 Score = 133 bits (67), Expect = 4e-28 Identities = 133/155 (85%) Strand = Plus / Minus Query: 164 aaaatgagaagttgataaccaacttctaggagagacataattaactgcattgatctcggt 223 ||||||||| || ||||||||||| | || || |||||||| || ||||| |||||||| Sbjct: 2222 aaaatgagaggtggataaccaactgcggggggatacataattcaccgcattaatctcggt 2163 Query: 224 cgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattctgctga 283 ||||| ||||||||||| |||||||| ||||||||||| || ||||||||||| || || Sbjct: 2162 agctacaccacccacggagtttaaagaacctaaaggagcatgagtcatatattccgccga 2103 Query: 284 gcgccgttcttgccaaggttgtatgtcttttttca 318 || |||||||||||||| |||||||| ||||||| Sbjct: 2102 acgtcgttcttgccaaggctgtatgtcctttttca 2068
>gb|AF528926.1| Euonymus alatus photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 131 bits (66), Expect = 2e-27 Identities = 104/117 (88%) Strand = Plus / Minus Query: 210 gcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtc 269 |||||||||||||| | |||||||||||| |||||||||||||| || || || |||||| Sbjct: 2176 gcattgatctcggtagntacgccacccacagaatttaaagagcccaacggggcatgggtc 2117 Query: 270 atatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 |||||||| || || || ||||||||||| ||||||||||||||||||| ||||||| Sbjct: 2116 atatattccgcggaacgtcgttcttgccagggttgtatgtcttttttcagcctactc 2060
>gb|AY147666.1| Hemerocallis littorea photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 129 bits (65), Expect = 6e-27 Identities = 110/125 (88%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| |||||||||||||| || ||||| ||||| || ||||||||||| |||||||||| Sbjct: 2184 aattgactgcattgatctcagtagctacaccacctacagaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || |||||||||||||| || || |||||||||||||||||||| || ||||||| || Sbjct: 2124 catgagtcatatattctgccgaacgtcgttcttgccaaggttgtatatcctttttcagcc 2065 Query: 322 tactc 326 ||||| Sbjct: 2064 tactc 2060
>gb|AY147643.1| Japonolirion osense photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 129 bits (65), Expect = 6e-27 Identities = 86/93 (92%) Strand = Plus / Minus Query: 234 cccacggaatttaaagagcctaaaggagcgtgggtcatatattctgctgagcgccgttct 293 ||||||||||||||||| ||||||||||| || |||||||||||||| || || |||||| Sbjct: 2152 cccacggaatttaaagaacctaaaggagcatgagtcatatattctgccgaacgtcgttct 2093 Query: 294 tgccaaggttgtatgtcttttttcaacctactc 326 ||||||||||||||||||||||||| ||||||| Sbjct: 2092 tgccaaggttgtatgtcttttttcagcctactc 2060
>gb|AY705189.1| Eriaxis rigida PsbC (psbC) gene, partial cds; chloroplast Length = 1400 Score = 129 bits (65), Expect = 6e-27 Identities = 86/93 (92%) Strand = Plus / Minus Query: 234 cccacggaatttaaagagcctaaaggagcgtgggtcatatattctgctgagcgccgttct 293 ||||| ||||||||||| ||||||||||| || |||||||||||||| || ||||||||| Sbjct: 1400 cccacagaatttaaagaacctaaaggagcatgagtcatatattctgccgaacgccgttct 1341 Query: 294 tgccaaggttgtatgtcttttttcaacctactc 326 |||||||| |||||||||||||||||||||||| Sbjct: 1340 tgccaaggctgtatgtcttttttcaacctactc 1308
>gb|AF239781.1| Gunnera chilensis photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2167 Score = 129 bits (65), Expect = 6e-27 Identities = 97/108 (89%) Strand = Plus / Minus Query: 219 tcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattct 278 ||||| | |||||||||||||||||||||||| || |||||||| || ||||||||||| Sbjct: 2167 tcggtagntacgccacccacggaatttaaagaacccaaaggagcatgagtcatatattcc 2108 Query: 279 gctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 || || || ||||||||||||||||||||||||||||||| ||||||| Sbjct: 2107 gcggaacgacgttcttgccaaggttgtatgtcttttttcagcctactc 2060
>gb|AF528943.1| Widdringtonia cedarbergensis photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 127 bits (64), Expect = 2e-26 Identities = 103/116 (88%) Strand = Plus / Minus Query: 210 gcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtc 269 ||||| |||||||| ||||| || ||||| ||||||||||| ||||||||||| || ||| Sbjct: 2176 gcattaatctcggtagctacaccgcccacagaatttaaagaacctaaaggagcatgagtc 2117 Query: 270 atatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacctact 325 |||||||||||||| || |||||||||||||||||||| |||||||| ||| |||| Sbjct: 2116 atatattctgctgaacgtcgttcttgccaaggttgtatatctttttttaacttact 2061
>emb|X70810.2|CLEGCGA Euglena gracilis chloroplast complete genome Length = 143171 Score = 127 bits (64), Expect = 2e-26 Identities = 187/228 (82%) Strand = Plus / Minus Query: 74 acgatcgattcccttttcaaaacctgctgcagcagctcgggctcttcctgcatgccataa 133 |||||| ||||| ||||||||||| ||||| || || ||||| || ||||||||||| Sbjct: 24527 acgatcaattcctttttcaaaaccaatagcagccgcacgagctctaccggcatgccataa 24468 Query: 134 atggcccacaaaaaagaagaatcctagaacaaaatgagaagttgataaccaacttctagg 193 ||| || |||||||||||||| ||| |||||||||||| |||| |||||||||||||| Sbjct: 24467 atgaccaacaaaaaagaagaaagctaaaacaaaatgagatgttgccaaccaacttctagg 24408 Query: 194 agagacataattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcc 253 | || |||| || ||||| ||||| || || || || || || ||||||||||| || Sbjct: 24407 attaacgaaatttacagcattaatctctgtagcaacacctccaacagaatttaaagaccc 24348 Query: 254 taaaggagcgtgggtcatatattctgctgagcgccgttcttgccaagg 301 ||||||||| || |||||||||||||||| | |||||||||||||| Sbjct: 24347 taaaggagcatgcgtcatatattctgctgctctacgttcttgccaagg 24300
>gb|AF462400.1| Bowenia serrulata photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 127 bits (64), Expect = 2e-26 Identities = 103/116 (88%) Strand = Plus / Minus Query: 210 gcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtc 269 |||||||||||||| ||||| |||||||||||||| ||||| ||||||||||| || ||| Sbjct: 2176 gcattgatctcggtagctacaccacccacggaattcaaagaacctaaaggagcatgagtc 2117 Query: 270 atatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacctact 325 ||||||||||| || || ||||||||||| || ||||| |||||||||| |||||| Sbjct: 2116 atatattctgccgaacgtcgttcttgccagggctgtatatcttttttcagcctact 2061
>gb|AF462407.1| Podocarpus chinensis photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2198 Score = 127 bits (64), Expect = 2e-26 Identities = 112/128 (87%) Strand = Plus / Minus Query: 192 ggagagacataattaactgcattgatctcggtcgctacgccacccacggaatttaaagag 251 |||||||||||||| || ||||| || ||||| |||||||||||||||||||| ||||| Sbjct: 2194 ggagagacataatttaccgcattaatttcggtagctacgccacccacggaattcaaagaa 2135 Query: 252 cctaaaggagcgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtct 311 ||||| |||||||| |||||||||||||| || || ||||||||||| || ||||| || Sbjct: 2134 cctaagggagcgtgagtcatatattctgccgaacgtcgttcttgccagggctgtatatcc 2075 Query: 312 tttttcaa 319 |||||||| Sbjct: 2074 tttttcaa 2067
>emb|X00929.1|CHEGPSB Euglena gracilis chloroplast DNA for photosystem II psbA gene and tRNA-Leu2 Length = 4904 Score = 127 bits (64), Expect = 2e-26 Identities = 187/228 (82%) Strand = Plus / Minus Query: 74 acgatcgattcccttttcaaaacctgctgcagcagctcgggctcttcctgcatgccataa 133 |||||| ||||| ||||||||||| ||||| || || ||||| || ||||||||||| Sbjct: 1390 acgatcaattcctttttcaaaaccaatagcagccgcacgagctctaccggcatgccataa 1331 Query: 134 atggcccacaaaaaagaagaatcctagaacaaaatgagaagttgataaccaacttctagg 193 ||| || |||||||||||||| ||| |||||||||||| |||| |||||||||||||| Sbjct: 1330 atgaccaacaaaaaagaagaaagctaaaacaaaatgagatgttgccaaccaacttctagg 1271 Query: 194 agagacataattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcc 253 | || |||| || ||||| ||||| || || || || || || ||||||||||| || Sbjct: 1270 attaacgaaatttacagcattaatctctgtagcaacacctccaacagaatttaaagaccc 1211 Query: 254 taaaggagcgtgggtcatatattctgctgagcgccgttcttgccaagg 301 ||||||||| || |||||||||||||||| | |||||||||||||| Sbjct: 1210 taaaggagcatgcgtcatatattctgctgctctacgttcttgccaagg 1163
>gb|AF239796.1| Welwitschia mirabilis photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 1873 Score = 125 bits (63), Expect = 9e-26 Identities = 87/95 (91%) Strand = Plus / Minus Query: 225 gctacgccacccacggaatttaaagagcctaaaggagcgtgggtcatatattctgctgag 284 ||||| ||||| || ||||||||||| ||||||||||| |||||||||||||| || ||| Sbjct: 1850 gctacaccacctactgaatttaaagaacctaaaggagcatgggtcatatattcagccgag 1791 Query: 285 cgccgttcttgccaaggttgtatgtcttttttcaa 319 || |||||||||||||||||||||||||||||||| Sbjct: 1790 cgtcgttcttgccaaggttgtatgtcttttttcaa 1756
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 125 bits (63), Expect = 9e-26 Identities = 219/271 (80%) Strand = Plus / Plus Query: 55 aaagaacaggttccaaatcacgatcgattcccttttcaaaacctgctgcagcagctcggg 114 |||| |||||||| |||||||| || ||||| || ||||| || |||||||| || |||| Sbjct: 53497 aaaggacaggttcaaaatcacggtcaattcctttctcaaatccggctgcagctgcacggg 53556 Query: 115 ctcttcctgcatgccataaatggcccacaaaaaagaagaatcctagaacaaaatgagaag 174 |||| || || ||||||| || || || || ||||| |||||| ||| ||||| || | Sbjct: 53557 ctctccccgcgtgccataggtgacctacgaagaagaaaaatcctgaaacgaaatgggagg 53616 Query: 175 ttgataaccaacttctaggagagacataattaactgcattgatctcggtcgctacgccac 234 | | ||||||||||| ||||| ||||| || |||||||| || ||||| ||||| |||| Sbjct: 53617 tggctaaccaacttcggggagaaacatagtttactgcattaatttcggtggctaccccac 53676 Query: 235 ccacggaatttaaagagcctaaaggagcgtgggtcatatattctgctgagcgccgttctt 294 |||| || || ||||| |||| |||||| || |||||||| ||||| || || ||||| | Sbjct: 53677 ccacagagttcaaagaacctagaggagcatgagtcatatactctgccgatcgtcgttcct 53736 Query: 295 gccaaggttgtatgtcttttttcaacctact 325 ||||||| ||||| ||||| |||||| |||| Sbjct: 53737 gccaaggctgtatatctttcttcaacttact 53767
>gb|AF123819.1|AF123819 Dioscorea bulbifera photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2158 Score = 125 bits (63), Expect = 9e-26 Identities = 96/107 (89%) Strand = Plus / Minus Query: 212 attgatctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtcat 271 ||||||||| || || ||||||||||| ||||||||||| ||||| ||||| |||||||| Sbjct: 2158 attgatctcagtagcaacgccacccacagaatttaaagaacctaagggagcatgggtcat 2099 Query: 272 atattctgctgagcgccgttcttgccaaggttgtatgtcttttttca 318 |||||| || || || ||||||||||||||||||||||||||||||| Sbjct: 2098 atattccgccgaacgtcgttcttgccaaggttgtatgtcttttttca 2052
>emb|X05295.1|CHZPTRNS Zea perennis cpDNA EcoRI-PstI fragment containing length mutation LM-3 from large unique sequence region Length = 831 Score = 125 bits (63), Expect = 9e-26 Identities = 87/94 (92%), Gaps = 2/94 (2%) Strand = Plus / Minus Query: 12 aacaggtataaataagnaaaatcttagttaagagggttcatgtaaagaacaggttccaaa 71 ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 92 aacaggtataaataa--aaaatcttagttaagaggggtcatgtaaagaacaggttccaaa 35 Query: 72 tcacgatcgattcccttttcaaaacctgctgcag 105 || ||||| |||||||||||||| ||||||||| Sbjct: 34 tcgcgatcaattcccttttcaaacgctgctgcag 1
>gb|AF528933.1| Phyllocladus alpinus photosystem II D2 protein (psbD) and photosystem II cp43 protein (psbC) genes, partial cds; chloroplast Length = 2184 Score = 123 bits (62), Expect = 4e-25 Identities = 98/110 (89%) Strand = Plus / Minus Query: 210 gcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtc 269 ||||| |||||||| |||||||||||||||||||| || || |||||||||||||| ||| Sbjct: 2176 gcattaatctcggtagctacgccacccacggaattcaacgaacctaaaggagcgtgagtc 2117 Query: 270 atatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaa 319 ||||||||||| || || ||||||||||| || |||||||| |||||||| Sbjct: 2116 atatattctgccgaacgtcgttcttgccagggctgtatgtcctttttcaa 2067
>gb|AY147671.1| Phormium tenax photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products Length = 2184 Score = 121 bits (61), Expect = 1e-24 Identities = 108/125 (86%) Strand = Plus / Minus Query: 202 aattaactgcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggag 261 |||| ||||||||||||||||| | ||| ||||| || ||||||||||| |||||||||| Sbjct: 2184 aattgactgcattgatctcggtagntacaccacctacagaatttaaagaacctaaaggag 2125 Query: 262 cgtgggtcatatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacc 321 | || |||||||||| | | || || |||||||||||||||||||| | |||||||| || Sbjct: 2124 catgagtcatatattntnccgaacgtcgttcttgccaaggttgtatatnttttttcagcc 2065 Query: 322 tactc 326 ||||| Sbjct: 2064 tactc 2060
>gb|DQ069644.1| Ginkgo biloba photosystem II 44 kDa protein (psbC) gene, partial cds; chloroplast Length = 1254 Score = 121 bits (61), Expect = 1e-24 Identities = 103/117 (88%) Strand = Plus / Minus Query: 210 gcattgatctcggtcgctacgccacccacggaatttaaagagcctaaaggagcgtgggtc 269 ||||||||||| || ||||| |||||||||||||| ||||| ||||||||||| || ||| Sbjct: 1247 gcattgatctcagtagctacaccacccacggaattcaaagaacctaaaggagcatgagtc 1188 Query: 270 atatattctgctgagcgccgttcttgccaaggttgtatgtcttttttcaacctactc 326 |||||||| || || || ||||||||||| || |||||||||||||||||| ||||| Sbjct: 1187 atatattccgccgaacgtcgttcttgccagggctgtatgtcttttttcaacttactc 1131 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,208,588 Number of Sequences: 3902068 Number of extensions: 3208588 Number of successful extensions: 60957 Number of sequences better than 10.0: 383 Number of HSP's better than 10.0 without gapping: 383 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 60238 Number of HSP's gapped (non-prelim): 681 length of query: 327 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 305 effective length of database: 17,147,199,772 effective search space: 5229895930460 effective search space used: 5229895930460 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
