>XPO6A_XENLA (Q53I77) Exportin-6-A|
          Length = 1135

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +1

Query: 337 QRLTVTIDQTSRVLHCSIKGKEALVPPLTRAARSLTVHMF 456
           QRL VT +   R LHCS++   +L+  + R A      MF
Sbjct: 548 QRLNVTAENDCRRLHCSLRDLSSLLQAVGRLAEYFIGDMF 587

>EGLN2_MOUSE (Q91YE2) Egl nine homolog 2 (EC 1.14.11.-) (Hypoxia-inducible|
           factor prolyl hydroxylase 1) (HIF-prolyl hydroxylase 1)
           (HIF-PH1) (Falkor)
          Length = 419

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 3/33 (9%)
 Frame = -2

Query: 271 QAPRTDDPSRRWASDAG---VPCSEPWASSVSQ 182
           Q  R + P R+WA D G    P   PWA   +Q
Sbjct: 110 QGARPEAPKRKWAKDGGDAPSPSKRPWARQENQ 142

>EGLN2_HUMAN (Q96KS0) Egl nine homolog 2 (EC 1.14.11.-) (Hypoxia-inducible|
           factor prolyl hydroxylase 1) (HIF-prolyl hydroxylase 1)
           (HIF-PH1) (HPH-3) (Prolyl hydroxylase domain-containing
           protein 1) (PHD1) (Estrogen-induced tag 6)
          Length = 407

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 3/33 (9%)
 Frame = -2

Query: 271 QAPRTDDPSRRWASDAG---VPCSEPWASSVSQ 182
           Q  R + P R+WA D G    P   PWA   +Q
Sbjct: 110 QGARPEAPKRKWAEDGGDAPSPSKRPWARQENQ 142

>MCM3A_HUMAN (O60318) 80 kda MCM3-associated protein (GANP protein)|
          Length = 1980

 Score = 28.9 bits (63), Expect = 9.5
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +3

Query: 207 SEHGTPASDAHRREGSSVLGACSVTDLASMQC 302
           S  GTPA  ++R E +  LG  S +++ ++QC
Sbjct: 408 SLRGTPARQSNRSESTDSLGGLSPSEVTAIQC 439

>GPHA2_RAT (Q925Q4) Glycoprotein hormone alpha 2 precursor (Thyrostimulin|
           alpha subunit)
          Length = 130

 Score = 28.9 bits (63), Expect = 9.5
 Identities = 16/65 (24%), Positives = 28/65 (43%)
 Frame = +3

Query: 105 NLLAVSSTH*CGLCNGGDAVMHTAGHCDTDDAHGSEHGTPASDAHRREGSSVLGACSVTD 284
           N+   S  H  G C G        GHC++  A  S +    +  +R   +SV   C+++ 
Sbjct: 38  NVTVRSDRH--GTCQGSHVAQACVGHCES-SAFPSRYSVLVASGYRHNITSVSQCCTISS 94

Query: 285 LASMQ 299
           L  ++
Sbjct: 95  LKKVR 99

>TRA2_PSEFL (Q51761) Putative transposase for insertion sequence IS1162|
          Length = 558

 Score = 28.9 bits (63), Expect = 9.5
 Identities = 21/72 (29%), Positives = 29/72 (40%)
 Frame = -3

Query: 420 EWWYQCLFSFDAAVQDTARLVDGHGQALPF*HRPEPSKERIACLQGLSRSRRQGPMTLLA 241
           EW  Q L  +   +    R +  H       H+P P     ACL  LS +R+ G   L A
Sbjct: 409 EWTPQRLLDWGERIGPQTRQIVEHQLT----HKPHPEMGYRACLGLLSLARQYGNARLEA 464

Query: 240 GGHQTLVXRVLN 205
              + +  R LN
Sbjct: 465 AASRAVQLRALN 476


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,260,271
Number of Sequences: 219361
Number of extensions: 1621878
Number of successful extensions: 4505
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4499
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4200495993
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)