ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd17e14 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK103487.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033130M12, full insert sequence Length = 1188 Score = 381 bits (192), Expect = e-102 Identities = 324/368 (88%) Strand = Plus / Minus Query: 226 tcacaacctcgcgatgaccgcttcaacctctgcaggagtgtagaggtggtagctggggga 285 |||||||| || ||||| ||||||||||||||||| ||||||||||||||| |||| || Sbjct: 907 tcacaaccgtgcaatgacagcttcaacctctgcaggggtgtagaggtggtagttgggaga 848 Query: 286 gacattcgcaatgtcaacattgtttggggtcaccttttcttccataacctgcttcaggat 345 || || || || || || |||||||| || ||||||||||||||||||||||||| ||| Sbjct: 847 aacctttgcgatatcgacgttgtttggagtaaccttttcttccataacctgcttcaagat 788 Query: 346 agaaagggctatggtctctgcctcagcgattgtcaattccttgttgtactgctcttgtaa 405 ||| |||||||||||||| ||||| | ||||| ||||| ||||||||||| ||||| Sbjct: 787 agacagggctatggtctcagcctcctgaagggtcaactccttattgtactgctcctgtaa 728 Query: 406 tgagctatcagctccttcagagcccgacccaattgccttggcattgcactgccagaaggt 465 ||||||||||||||||||||| || || |||||||||||||||||||||||||| ||||| Sbjct: 727 tgagctatcagctccttcagaacctgatccaattgccttggcattgcactgccaaaaggt 668 Query: 466 cccagatgggtccgtgtagtacaagctgggtccattttcatcatgaccagcaataaggag 525 || |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 667 tcctgatgggtcagtgtagtacaagctgggtccattctcatcatgaccagcaataaggag 608 Query: 526 agagactccaaacggccgtgacattgattcttcatcaccttcaccaaagcgcaaagccaa 585 |||||| ||||| || |||||||| || |||||||||||||||||||| |||| ||| || Sbjct: 607 agagacaccaaatggtcgtgacatcgactcttcatcaccttcaccaaaacgcagagctaa 548 Query: 586 gtcacaga 593 |||||||| Sbjct: 547 gtcacaga 540
>dbj|AK059521.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-C07, full insert sequence Length = 1056 Score = 381 bits (192), Expect = e-102 Identities = 324/368 (88%) Strand = Plus / Minus Query: 226 tcacaacctcgcgatgaccgcttcaacctctgcaggagtgtagaggtggtagctggggga 285 |||||||| || ||||| ||||||||||||||||| ||||||||||||||| |||| || Sbjct: 802 tcacaaccgtgcaatgacagcttcaacctctgcaggggtgtagaggtggtagttgggaga 743 Query: 286 gacattcgcaatgtcaacattgtttggggtcaccttttcttccataacctgcttcaggat 345 || || || || || || |||||||| || ||||||||||||||||||||||||| ||| Sbjct: 742 aacctttgcgatatcgacgttgtttggagtaaccttttcttccataacctgcttcaagat 683 Query: 346 agaaagggctatggtctctgcctcagcgattgtcaattccttgttgtactgctcttgtaa 405 ||| |||||||||||||| ||||| | ||||| ||||| ||||||||||| ||||| Sbjct: 682 agacagggctatggtctcagcctcctgaagggtcaactccttattgtactgctcctgtaa 623 Query: 406 tgagctatcagctccttcagagcccgacccaattgccttggcattgcactgccagaaggt 465 ||||||||||||||||||||| || || |||||||||||||||||||||||||| ||||| Sbjct: 622 tgagctatcagctccttcagaacctgatccaattgccttggcattgcactgccaaaaggt 563 Query: 466 cccagatgggtccgtgtagtacaagctgggtccattttcatcatgaccagcaataaggag 525 || |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 562 tcctgatgggtcagtgtagtacaagctgggtccattctcatcatgaccagcaataaggag 503 Query: 526 agagactccaaacggccgtgacattgattcttcatcaccttcaccaaagcgcaaagccaa 585 |||||| ||||| || |||||||| || |||||||||||||||||||| |||| ||| || Sbjct: 502 agagacaccaaatggtcgtgacatcgactcttcatcaccttcaccaaaacgcagagctaa 443 Query: 586 gtcacaga 593 |||||||| Sbjct: 442 gtcacaga 435
>dbj|AB026561.1| Oryza sativa (japonica cultivar-group) OsPAE1 mRNA for alpha 5 subunit of 20S proteasome, complete cds Length = 1056 Score = 381 bits (192), Expect = e-102 Identities = 324/368 (88%) Strand = Plus / Minus Query: 226 tcacaacctcgcgatgaccgcttcaacctctgcaggagtgtagaggtggtagctggggga 285 |||||||| || ||||| ||||||||||||||||| ||||||||||||||| |||| || Sbjct: 807 tcacaaccgtgcaatgacagcttcaacctctgcaggggtgtagaggtggtagttgggaga 748 Query: 286 gacattcgcaatgtcaacattgtttggggtcaccttttcttccataacctgcttcaggat 345 || || || || || || |||||||| || ||||||||||||||||||||||||| ||| Sbjct: 747 aacctttgcgatatcgacgttgtttggagtaaccttttcttccataacctgcttcaagat 688 Query: 346 agaaagggctatggtctctgcctcagcgattgtcaattccttgttgtactgctcttgtaa 405 ||| |||||||||||||| ||||| | ||||| ||||| ||||||||||| ||||| Sbjct: 687 agacagggctatggtctcagcctcctgaagggtcaactccttattgtactgctcctgtaa 628 Query: 406 tgagctatcagctccttcagagcccgacccaattgccttggcattgcactgccagaaggt 465 ||||||||||||||||||||| || || |||||||||||||||||||||||||| ||||| Sbjct: 627 tgagctatcagctccttcagaacctgatccaattgccttggcattgcactgccaaaaggt 568 Query: 466 cccagatgggtccgtgtagtacaagctgggtccattttcatcatgaccagcaataaggag 525 || |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 567 tcctgatgggtcagtgtagtacaagctgggtccattctcatcatgaccagcaataaggag 508 Query: 526 agagactccaaacggccgtgacattgattcttcatcaccttcaccaaagcgcaaagccaa 585 |||||| ||||| || |||||||| || |||||||||||||||||||| |||| ||| || Sbjct: 507 agagacaccaaatggtcgtgacatcgactcttcatcaccttcaccaaaacgcagagctaa 448 Query: 586 gtcacaga 593 |||||||| Sbjct: 447 gtcacaga 440
>gb|BT019190.1| Zea mays clone Contig862.F mRNA sequence Length = 1161 Score = 335 bits (169), Expect = 1e-88 Identities = 319/369 (86%) Strand = Plus / Plus Query: 225 ttcacaacctcgcgatgaccgcttcaacctctgcaggagtgtagaggtggtagctggggg 284 |||||| |||||||||||| ||||| ||||| ||||| |||||||||||||| |||||| Sbjct: 341 ttcacagcctcgcgatgacggcttccacctcggcaggggtgtagaggtggtacttggggg 400 Query: 285 agacattcgcaatgtcaacattgtttggggtcaccttttcttccataacctgcttcagga 344 || || ||||| || || ||||||||||||||||| |||||||||||||||||||||| Sbjct: 401 caaccttggcaatatcgacgttgtttggggtcaccttctcttccataacctgcttcagga 460 Query: 345 tagaaagggctatggtctctgcctcagcgattgtcaattccttgttgtactgctcttgta 404 ||||||||||||||||||| ||||| || |||||||||||||||||||| || || | Sbjct: 461 tagaaagggctatggtctccgcctcctggagggtcaattccttgttgtactgttcctgca 520 Query: 405 atgagctatcagctccttcagagcccgacccaattgccttggcattgcactgccagaagg 464 | || ||||||||||| ||||| || || ||||||||||| || ||||| ||||| || | Sbjct: 521 aggaactatcagctccctcagaacctgatccaattgcctttgcgttgcattgccaaaatg 580 Query: 465 tcccagatgggtccgtgtagtacaagctgggtccattttcatcatgaccagcaataagga 524 | |||||||| || |||||||||| ||| |||||||| |||||||| |||||||| |||| Sbjct: 581 taccagatggatcagtgtagtacaggctaggtccattctcatcatgtccagcaattagga 640 Query: 525 gagagactccaaacggccgtgacattgattcttcatcaccttcaccaaagcgcaaagcca 584 ||||||||||||| |||||||||||||| ||||| |||||||| ||||| |||| ||| | Sbjct: 641 gagagactccaaatggccgtgacattgactcttcgtcaccttcgccaaaacgcagagcta 700 Query: 585 agtcacaga 593 ||||||||| Sbjct: 701 agtcacaga 709
>gb|BT017580.1| Zea mays clone EL01N0429D12.c mRNA sequence Length = 1354 Score = 335 bits (169), Expect = 1e-88 Identities = 319/369 (86%) Strand = Plus / Minus Query: 225 ttcacaacctcgcgatgaccgcttcaacctctgcaggagtgtagaggtggtagctggggg 284 |||||| |||||||||||| ||||| ||||| ||||| |||||||||||||| |||||| Sbjct: 1121 ttcacagcctcgcgatgacggcttccacctcggcaggggtgtagaggtggtacttggggg 1062 Query: 285 agacattcgcaatgtcaacattgtttggggtcaccttttcttccataacctgcttcagga 344 || || ||||| || || ||||||||||||||||| |||||||||||||||||||||| Sbjct: 1061 caaccttggcaatatcgacgttgtttggggtcaccttctcttccataacctgcttcagga 1002 Query: 345 tagaaagggctatggtctctgcctcagcgattgtcaattccttgttgtactgctcttgta 404 ||||||||||||||||||| ||||| || |||||||||||||||||||| || || | Sbjct: 1001 tagaaagggctatggtctccgcctcctggagggtcaattccttgttgtactgttcctgca 942 Query: 405 atgagctatcagctccttcagagcccgacccaattgccttggcattgcactgccagaagg 464 | || ||||||||||| ||||| || || ||||||||||| || ||||| ||||| || | Sbjct: 941 aggaactatcagctccctcagaacctgatccaattgcctttgcgttgcattgccaaaatg 882 Query: 465 tcccagatgggtccgtgtagtacaagctgggtccattttcatcatgaccagcaataagga 524 | |||||||| || |||||||||| ||| |||||||| |||||||| |||||||| |||| Sbjct: 881 taccagatggatcagtgtagtacaggctaggtccattctcatcatgtccagcaattagga 822 Query: 525 gagagactccaaacggccgtgacattgattcttcatcaccttcaccaaagcgcaaagcca 584 ||||||||||||| |||||||||||||| ||||| |||||||| ||||| |||| ||| | Sbjct: 821 gagagactccaaatggccgtgacattgactcttcgtcaccttcgccaaaacgcagagcta 762 Query: 585 agtcacaga 593 ||||||||| Sbjct: 761 agtcacaga 753
>gb|AY110522.1| Zea mays CL4677_2 mRNA sequence Length = 1304 Score = 335 bits (169), Expect = 1e-88 Identities = 319/369 (86%) Strand = Plus / Minus Query: 225 ttcacaacctcgcgatgaccgcttcaacctctgcaggagtgtagaggtggtagctggggg 284 |||||| |||||||||||| ||||| ||||| ||||| |||||||||||||| |||| | Sbjct: 1014 ttcacagcctcgcgatgacggcttccacctcggcaggggtgtagaggtggtacttgggag 955 Query: 285 agacattcgcaatgtcaacattgtttggggtcaccttttcttccataacctgcttcagga 344 || || ||||| || || ||||||||||||||||| |||||||||||||||||||||| Sbjct: 954 caaccttggcaatatcgacgttgtttggggtcaccttctcttccataacctgcttcagga 895 Query: 345 tagaaagggctatggtctctgcctcagcgattgtcaattccttgttgtactgctcttgta 404 ||||||||||||||||||| ||||| || |||||||||||||||||||| || || | Sbjct: 894 tagaaagggctatggtctccgcctcctggagggtcaattccttgttgtactgttcctgca 835 Query: 405 atgagctatcagctccttcagagcccgacccaattgccttggcattgcactgccagaagg 464 | || ||||||||||| ||||| || || ||||||||||| || ||||| ||||| || | Sbjct: 834 aggaactatcagctccctcagaacctgatccaattgcctttgcgttgcattgccaaaatg 775 Query: 465 tcccagatgggtccgtgtagtacaagctgggtccattttcatcatgaccagcaataagga 524 | ||||||||||| |||||||||| ||| |||||||| |||||||| |||||||| |||| Sbjct: 774 taccagatgggtcagtgtagtacaggctaggtccattctcatcatgtccagcaattagga 715 Query: 525 gagagactccaaacggccgtgacattgattcttcatcaccttcaccaaagcgcaaagcca 584 ||||||||||||| |||||||||||||| ||||| |||||||| ||||| |||| ||| | Sbjct: 714 gagagactccaaatggccgtgacattgactcttcgtcaccttcgccaaaacgcagagcta 655 Query: 585 agtcacaga 593 ||||||||| Sbjct: 654 agtcacaga 646
>gb|BT017253.1| Zea mays clone EL01N0307H03.c mRNA sequence Length = 1104 Score = 315 bits (159), Expect = 9e-83 Identities = 315/367 (85%) Strand = Plus / Minus Query: 225 ttcacaacctcgcgatgaccgcttcaacctctgcaggagtgtagaggtggtagctggggg 284 |||||| ||||||||| || ||||| ||||| ||||| |||||||||||||| |||| | Sbjct: 911 ttcacagcctcgcgatcacggcttcgacctcggcaggggtgtagaggtggtacttgggag 852 Query: 285 agacattcgcaatgtcaacattgtttggggtcaccttttcttccataacctgcttcagga 344 || || ||||| || || ||||||||||||||||| || ||||||||||||||||| | Sbjct: 851 caaccttggcaatatcgacgttgtttggggtcaccttctcctccataacctgcttcagaa 792 Query: 345 tagaaagggctatggtctctgcctcagcgattgtcaattccttgttgtactgctcttgta 404 ||||||||||||||||||| ||||| | | | || ||||||||||||||||| || | Sbjct: 791 tagaaagggctatggtctccgcctcctcaagggccagctccttgttgtactgctcctgca 732 Query: 405 atgagctatcagctccttcagagcccgacccaattgccttggcattgcactgccagaagg 464 | ||||||||||||||||||||||| || ||||||||||| || ||||| ||||| || | Sbjct: 731 aggagctatcagctccttcagagccagatccaattgccttcgcgttgcattgccaaaaag 672 Query: 465 tcccagatgggtccgtgtagtacaagctgggtccattttcatcatgaccagcaataagga 524 | ||||||||||| |||||||||| ||| |||||||| ||||| || |||||||| |||| Sbjct: 671 taccagatgggtcggtgtagtacaggctaggtccattctcatcgtgtccagcaattagga 612 Query: 525 gagagactccaaacggccgtgacattgattcttcatcaccttcaccaaagcgcaaagcca 584 ||||||||||||| |||||||||||||| ||||| |||||||| |||||||||| ||| | Sbjct: 611 gagagactccaaatggccgtgacattgactcttcgtcaccttcgccaaagcgcagagcta 552 Query: 585 agtcaca 591 ||||||| Sbjct: 551 agtcaca 545
>ref|NM_104262.1| Arabidopsis thaliana PAE1; endopeptidase/ peptidase/ threonine endopeptidase AT1G53850 (PAE1) mRNA, complete cds Length = 1006 Score = 196 bits (99), Expect = 6e-47 Identities = 174/199 (87%) Strand = Plus / Minus Query: 386 ttgttgtactgctcttgtaatgagctatcagctccttcagagcccgacccaattgccttg 445 |||||| | |||||||| | |||||||||||||||||||| || || ||||||||||| Sbjct: 669 ttgttgaattgctcttgaagagagctatcagctccttcagaacctgaaccaattgccttt 610 Query: 446 gcattgcactgccagaaggtcccagatgggtccgtgtagtacaagctgggtccattttca 505 ||||||||||||||||| || || || || || |||||||||||||| |||||||||||| Sbjct: 609 gcattgcactgccagaatgttcctgaaggatcagtgtagtacaagcttggtccattttca 550 Query: 506 tcatgaccagcaataaggagagagactccaaacggccgtgacattgattcttcatcacct 565 ||||| |||||||| || ||||| |||||||||||||| |||||||||||||| || ||| Sbjct: 549 tcatggccagcaatgagaagagatactccaaacggccgagacattgattcttcctctcct 490 Query: 566 tcaccaaagcgcaaagcca 584 |||||||| || ||||||| Sbjct: 489 tcaccaaaccgtaaagcca 471 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 308 tttggggtcaccttttcttccataacctgcttcaggataga 348 ||||| |||||||||||||||||||| ||||| |||||||| Sbjct: 747 tttggagtcaccttttcttccataacttgctttaggataga 707
>gb|AY114616.1| Arabidopsis thaliana 20S proteasome subunit PAE1 (At1g53850) mRNA, complete cds Length = 869 Score = 196 bits (99), Expect = 6e-47 Identities = 174/199 (87%) Strand = Plus / Minus Query: 386 ttgttgtactgctcttgtaatgagctatcagctccttcagagcccgacccaattgccttg 445 |||||| | |||||||| | |||||||||||||||||||| || || ||||||||||| Sbjct: 554 ttgttgaattgctcttgaagagagctatcagctccttcagaacctgaaccaattgccttt 495 Query: 446 gcattgcactgccagaaggtcccagatgggtccgtgtagtacaagctgggtccattttca 505 ||||||||||||||||| || || || || || |||||||||||||| |||||||||||| Sbjct: 494 gcattgcactgccagaatgttcctgaaggatcagtgtagtacaagcttggtccattttca 435 Query: 506 tcatgaccagcaataaggagagagactccaaacggccgtgacattgattcttcatcacct 565 ||||| |||||||| || ||||| |||||||||||||| |||||||||||||| || ||| Sbjct: 434 tcatggccagcaatgagaagagatactccaaacggccgagacattgattcttcctctcct 375 Query: 566 tcaccaaagcgcaaagcca 584 |||||||| || ||||||| Sbjct: 374 tcaccaaaccgtaaagcca 356 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 308 tttggggtcaccttttcttccataacctgcttcaggataga 348 ||||| |||||||||||||||||||| ||||| |||||||| Sbjct: 632 tttggagtcaccttttcttccataacttgctttaggataga 592
>gb|AY072371.1| Arabidopsis thaliana 20S proteasome subunit PAE1 (At1g53850) mRNA, complete cds Length = 1003 Score = 196 bits (99), Expect = 6e-47 Identities = 174/199 (87%) Strand = Plus / Minus Query: 386 ttgttgtactgctcttgtaatgagctatcagctccttcagagcccgacccaattgccttg 445 |||||| | |||||||| | |||||||||||||||||||| || || ||||||||||| Sbjct: 667 ttgttgaattgctcttgaagagagctatcagctccttcagaacctgaaccaattgccttt 608 Query: 446 gcattgcactgccagaaggtcccagatgggtccgtgtagtacaagctgggtccattttca 505 ||||||||||||||||| || || || || || |||||||||||||| |||||||||||| Sbjct: 607 gcattgcactgccagaatgttcctgaaggatcagtgtagtacaagcttggtccattttca 548 Query: 506 tcatgaccagcaataaggagagagactccaaacggccgtgacattgattcttcatcacct 565 ||||| |||||||| || ||||| |||||||||||||| |||||||||||||| || ||| Sbjct: 547 tcatggccagcaatgagaagagatactccaaacggccgagacattgattcttcctctcct 488 Query: 566 tcaccaaagcgcaaagcca 584 |||||||| || ||||||| Sbjct: 487 tcaccaaaccgtaaagcca 469 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 308 tttggggtcaccttttcttccataacctgcttcaggataga 348 ||||| |||||||||||||||||||| ||||| |||||||| Sbjct: 745 tttggagtcaccttttcttccataacttgctttaggataga 705
>gb|AY086045.1| Arabidopsis thaliana clone 20801 mRNA, complete sequence Length = 1006 Score = 196 bits (99), Expect = 6e-47 Identities = 174/199 (87%) Strand = Plus / Minus Query: 386 ttgttgtactgctcttgtaatgagctatcagctccttcagagcccgacccaattgccttg 445 |||||| | |||||||| | |||||||||||||||||||| || || ||||||||||| Sbjct: 669 ttgttgaattgctcttgaagagagctatcagctccttcagaacctgaaccaattgccttt 610 Query: 446 gcattgcactgccagaaggtcccagatgggtccgtgtagtacaagctgggtccattttca 505 ||||||||||||||||| || || || || || |||||||||||||| |||||||||||| Sbjct: 609 gcattgcactgccagaatgttcctgaaggatcagtgtagtacaagcttggtccattttca 550 Query: 506 tcatgaccagcaataaggagagagactccaaacggccgtgacattgattcttcatcacct 565 ||||| |||||||| || ||||| |||||||||||||| |||||||||||||| || ||| Sbjct: 549 tcatggccagcaatgagaagagatactccaaacggccgagacattgattcttcctctcct 490 Query: 566 tcaccaaagcgcaaagcca 584 |||||||| || ||||||| Sbjct: 489 tcaccaaaccgtaaagcca 471 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 308 tttggggtcaccttttcttccataacctgcttcaggataga 348 ||||| |||||||||||||||||||| ||||| |||||||| Sbjct: 747 tttggagtcaccttttcttccataacttgctttaggataga 707
>dbj|AK220949.1| Arabidopsis thaliana mRNA for hypothetical protein, partial cds, clone: RAFL22-54-C04 Length = 543 Score = 190 bits (96), Expect = 4e-45 Identities = 165/188 (87%) Strand = Plus / Minus Query: 386 ttgttgtactgctcttgtaatgagctatcagctccttcagagcccgacccaattgccttg 445 |||||| | |||||||| | |||||||||||||||||||| || || ||||||||||| Sbjct: 196 ttgttgaattgctcttgaagagagctatcagctccttcagaacctgaaccaattgccttt 137 Query: 446 gcattgcactgccagaaggtcccagatgggtccgtgtagtacaagctgggtccattttca 505 ||||||||||||||||| || || || || || |||||||||||||| |||||||||||| Sbjct: 136 gcattgcactgccagaatgttcctgaaggatcagtgtagtacaagcttggtccattttca 77 Query: 506 tcatgaccagcaataaggagagagactccaaacggccgtgacattgattcttcatcacct 565 ||||| |||||||| || ||||| |||||||||||||| |||||||||||||| || ||| Sbjct: 76 tcatggccagcaatgagaagagatactccaaacggccgagacattgattcttcctctcct 17 Query: 566 tcaccaaa 573 |||||||| Sbjct: 16 tcaccaaa 9 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 308 tttggggtcaccttttcttccataacctgcttcaggataga 348 ||||| |||||||||||||||||||| ||||| |||||||| Sbjct: 274 tttggagtcaccttttcttccataacttgctttaggataga 234
>gb|AF043524.1|AF043524 Arabidopsis thaliana 20S proteasome subunit PAE1 (PAE1) mRNA, complete cds Length = 1005 Score = 188 bits (95), Expect = 1e-44 Identities = 173/199 (86%) Strand = Plus / Minus Query: 386 ttgttgtactgctcttgtaatgagctatcagctccttcagagcccgacccaattgccttg 445 |||||| | |||||||| | |||||||||||||||||||| || || ||||||||||| Sbjct: 647 ttgttgaattgctcttgaagagagctatcagctccttcagaacctgaaccaattgccttt 588 Query: 446 gcattgcactgccagaaggtcccagatgggtccgtgtagtacaagctgggtccattttca 505 ||||||||||||||||| || || || || || |||||||||||||| |||||||||||| Sbjct: 587 gcattgcactgccagaatgttcctgaaggatcagtgtagtacaagcttggtccattttca 528 Query: 506 tcatgaccagcaataaggagagagactccaaacggccgtgacattgattcttcatcacct 565 ||||| |||||||| || ||||| ||||| |||||||| |||||||||||||| || ||| Sbjct: 527 tcatggccagcaatgagaagagatactccgaacggccgagacattgattcttcctctcct 468 Query: 566 tcaccaaagcgcaaagcca 584 |||||||| || ||||||| Sbjct: 467 tcaccaaaccgtaaagcca 449 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 308 tttggggtcaccttttcttccataacctgcttcaggataga 348 ||||| |||||||||||||||||||| ||||| |||||||| Sbjct: 725 tttggagtcaccttttcttccataacttgctttaggataga 685
>ref|NM_112287.2| Arabidopsis thaliana PAE2; endopeptidase/ peptidase/ threonine endopeptidase AT3G14290 (PAE2) mRNA, complete cds Length = 1023 Score = 159 bits (80), Expect = 1e-35 Identities = 170/200 (85%) Strand = Plus / Minus Query: 383 tccttgttgtactgctcttgtaatgagctatcagctccttcagagcccgacccaattgcc 442 ||||||||| | |||||||| | || |||||||||||||| ||||| |||||||||||| Sbjct: 661 tccttgttgaattgctcttggagagaactatcagctccttctgagccagacccaattgcc 602 Query: 443 ttggcattgcactgccagaaggtcccagatgggtccgtgtagtacaagctgggtccattt 502 || |||||||| |||||||| || || ||||| || |||||||||| ||| ||||||||| Sbjct: 601 tttgcattgcattgccagaatgttcccgatggatctgtgtagtacaggctcggtccattt 542 Query: 503 tcatcatgaccagcaataaggagagagactccaaacggccgtgacattgattcttcatca 562 |||||||| |||||||| || || || |||||||| || || |||||||| ||||| || Sbjct: 541 tcatcatgcccagcaatgagaagggatactccaaatggacgagacattgactcttcctct 482 Query: 563 ccttcaccaaagcgcaaagc 582 ||||||||||| || ||||| Sbjct: 481 ccttcaccaaaccgtaaagc 462 Score = 79.8 bits (40), Expect = 9e-12 Identities = 96/112 (85%), Gaps = 2/112 (1%) Strand = Plus / Minus Query: 238 gatgaccgcttcaacctctgcaggagtgtagaggtggta-gctgggggagacattcgcaa 296 |||||| ||||||||||| ||||||||||||||| || ||||| | ||| || |||| Sbjct: 806 gatgacggcttcaacctcctgaggagtgtagaggtgataagctggtgc-gactttggcaa 748 Query: 297 tgtcaacattgtttggggtcaccttttcttccataacctgcttcaggataga 348 |||| ||||||||||| ||||||||||||||||| || ||||| |||||||| Sbjct: 747 tgtcgacattgtttggagtcaccttttcttccattacttgctttaggataga 696
>gb|AY062970.1| Arabidopsis thaliana putative 20S proteasome subunit PAE2 (At3g14290) mRNA, complete cds Length = 745 Score = 159 bits (80), Expect = 1e-35 Identities = 170/200 (85%) Strand = Plus / Minus Query: 383 tccttgttgtactgctcttgtaatgagctatcagctccttcagagcccgacccaattgcc 442 ||||||||| | |||||||| | || |||||||||||||| ||||| |||||||||||| Sbjct: 557 tccttgttgaattgctcttggagagaactatcagctccttctgagccagacccaattgcc 498 Query: 443 ttggcattgcactgccagaaggtcccagatgggtccgtgtagtacaagctgggtccattt 502 || |||||||| |||||||| || || ||||| || |||||||||| ||| ||||||||| Sbjct: 497 tttgcattgcattgccagaatgttcccgatggatctgtgtagtacaggctcggtccattt 438 Query: 503 tcatcatgaccagcaataaggagagagactccaaacggccgtgacattgattcttcatca 562 |||||||| |||||||| || || || |||||||| || || |||||||| ||||| || Sbjct: 437 tcatcatgcccagcaatgagaagggatactccaaatggacgagacattgactcttcctct 378 Query: 563 ccttcaccaaagcgcaaagc 582 ||||||||||| || ||||| Sbjct: 377 ccttcaccaaaccgtaaagc 358 Score = 79.8 bits (40), Expect = 9e-12 Identities = 96/112 (85%), Gaps = 2/112 (1%) Strand = Plus / Minus Query: 238 gatgaccgcttcaacctctgcaggagtgtagaggtggta-gctgggggagacattcgcaa 296 |||||| ||||||||||| ||||||||||||||| || ||||| | ||| || |||| Sbjct: 702 gatgacggcttcaacctcctgaggagtgtagaggtgataagctggtgc-gactttggcaa 644 Query: 297 tgtcaacattgtttggggtcaccttttcttccataacctgcttcaggataga 348 |||| ||||||||||| ||||||||||||||||| || ||||| |||||||| Sbjct: 643 tgtcgacattgtttggagtcaccttttcttccattacttgctttaggataga 592
>gb|AF370245.1| Arabidopsis thaliana putative 20S proteasome subunit PAE2 (At3g14290) mRNA, complete cds Length = 987 Score = 159 bits (80), Expect = 1e-35 Identities = 170/200 (85%) Strand = Plus / Minus Query: 383 tccttgttgtactgctcttgtaatgagctatcagctccttcagagcccgacccaattgcc 442 ||||||||| | |||||||| | || |||||||||||||| ||||| |||||||||||| Sbjct: 660 tccttgttgaattgctcttggagagaactatcagctccttctgagccagacccaattgcc 601 Query: 443 ttggcattgcactgccagaaggtcccagatgggtccgtgtagtacaagctgggtccattt 502 || |||||||| |||||||| || || ||||| || |||||||||| ||| ||||||||| Sbjct: 600 tttgcattgcattgccagaatgttcccgatggatctgtgtagtacaggctcggtccattt 541 Query: 503 tcatcatgaccagcaataaggagagagactccaaacggccgtgacattgattcttcatca 562 |||||||| |||||||| || || || |||||||| || || |||||||| ||||| || Sbjct: 540 tcatcatgcccagcaatgagaagggatactccaaatggacgagacattgactcttcctct 481 Query: 563 ccttcaccaaagcgcaaagc 582 ||||||||||| || ||||| Sbjct: 480 ccttcaccaaaccgtaaagc 461 Score = 79.8 bits (40), Expect = 9e-12 Identities = 96/112 (85%), Gaps = 2/112 (1%) Strand = Plus / Minus Query: 238 gatgaccgcttcaacctctgcaggagtgtagaggtggta-gctgggggagacattcgcaa 296 |||||| ||||||||||| ||||||||||||||| || ||||| | ||| || |||| Sbjct: 805 gatgacggcttcaacctcctgaggagtgtagaggtgataagctggtgc-gactttggcaa 747 Query: 297 tgtcaacattgtttggggtcaccttttcttccataacctgcttcaggataga 348 |||| ||||||||||| ||||||||||||||||| || ||||| |||||||| Sbjct: 746 tgtcgacattgtttggagtcaccttttcttccattacttgctttaggataga 695
>emb|BX823159.1|CNS0A658 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB94ZC05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 933 Score = 159 bits (80), Expect = 1e-35 Identities = 170/200 (85%) Strand = Plus / Minus Query: 383 tccttgttgtactgctcttgtaatgagctatcagctccttcagagcccgacccaattgcc 442 ||||||||| | |||||||| | || |||||||||||||| ||||| |||||||||||| Sbjct: 635 tccttgttgaattgctcttggagagaactatcagctccttctgagccagacccaattgcc 576 Query: 443 ttggcattgcactgccagaaggtcccagatgggtccgtgtagtacaagctgggtccattt 502 || |||||||| |||||||| || || ||||| || |||||||||| ||| ||||||||| Sbjct: 575 tttgcattgcattgccagaatgttcccgatggatctgtgtagtacaggctcggtccattt 516 Query: 503 tcatcatgaccagcaataaggagagagactccaaacggccgtgacattgattcttcatca 562 |||||||| |||||||| || || || |||||||| || || |||||||| ||||| || Sbjct: 515 tcatcatgcccagcaatgagaagggatactccaaatggacgagacattgactcttcctct 456 Query: 563 ccttcaccaaagcgcaaagc 582 ||||||||||| || ||||| Sbjct: 455 ccttcaccaaaccgtaaagc 436 Score = 79.8 bits (40), Expect = 9e-12 Identities = 96/112 (85%), Gaps = 2/112 (1%) Strand = Plus / Minus Query: 238 gatgaccgcttcaacctctgcaggagtgtagaggtggta-gctgggggagacattcgcaa 296 |||||| ||||||||||| ||||||||||||||| || ||||| | ||| || |||| Sbjct: 780 gatgacggcttcaacctcctgaggagtgtagaggtgataagctggtgc-gactttggcaa 722 Query: 297 tgtcaacattgtttggggtcaccttttcttccataacctgcttcaggataga 348 |||| ||||||||||| ||||||||||||||||| || ||||| |||||||| Sbjct: 721 tgtcgacattgtttggagtcaccttttcttccattacttgctttaggataga 670
>emb|BX822992.1|CNS0A648 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB79ZG11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 948 Score = 159 bits (80), Expect = 1e-35 Identities = 170/200 (85%) Strand = Plus / Minus Query: 383 tccttgttgtactgctcttgtaatgagctatcagctccttcagagcccgacccaattgcc 442 ||||||||| | |||||||| | || |||||||||||||| ||||| |||||||||||| Sbjct: 595 tccttgttgaattgctcttggagagaactatcagctccttctgagccagacccaattgcc 536 Query: 443 ttggcattgcactgccagaaggtcccagatgggtccgtgtagtacaagctgggtccattt 502 || |||||||| |||||||| || || ||||| || |||||||||| ||| ||||||||| Sbjct: 535 tttgcattgcattgccagaatgttcccgatggatctgtgtagtacaggctcggtccattt 476 Query: 503 tcatcatgaccagcaataaggagagagactccaaacggccgtgacattgattcttcatca 562 |||||||| |||||||| || || || |||||||| || || |||||||| ||||| || Sbjct: 475 tcatcatgcccagcaatgagaagggatactccaaatggacgagacattgactcttcctct 416 Query: 563 ccttcaccaaagcgcaaagc 582 ||||||||||| || ||||| Sbjct: 415 ccttcaccaaaccgtaaagc 396 Score = 79.8 bits (40), Expect = 9e-12 Identities = 96/112 (85%), Gaps = 2/112 (1%) Strand = Plus / Minus Query: 238 gatgaccgcttcaacctctgcaggagtgtagaggtggta-gctgggggagacattcgcaa 296 |||||| ||||||||||| ||||||||||||||| || ||||| | ||| || |||| Sbjct: 740 gatgacggcttcaacctcctgaggagtgtagaggtgataagctggtgc-gactttggcaa 682 Query: 297 tgtcaacattgtttggggtcaccttttcttccataacctgcttcaggataga 348 |||| ||||||||||| ||||||||||||||||| || ||||| |||||||| Sbjct: 681 tgtcgacattgtttggagtcaccttttcttccattacttgctttaggataga 630
>emb|BX822092.1|CNS0A644 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB11ZE03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 844 Score = 159 bits (80), Expect = 1e-35 Identities = 170/200 (85%) Strand = Plus / Minus Query: 383 tccttgttgtactgctcttgtaatgagctatcagctccttcagagcccgacccaattgcc 442 ||||||||| | |||||||| | || |||||||||||||| ||||| |||||||||||| Sbjct: 581 tccttgttgaattgctcttggagagaactatcagctccttctgagccagacccaattgcc 522 Query: 443 ttggcattgcactgccagaaggtcccagatgggtccgtgtagtacaagctgggtccattt 502 || |||||||| |||||||| || || ||||| || |||||||||| ||| ||||||||| Sbjct: 521 tttgcattgcattgccagaatgttcccgatggatctgtgtagtacaggctcggtccattt 462 Query: 503 tcatcatgaccagcaataaggagagagactccaaacggccgtgacattgattcttcatca 562 |||||||| |||||||| || || || |||||||| || || |||||||| ||||| || Sbjct: 461 tcatcatgcccagcaatgagaagggatactccaaatggacgagacattgactcttcctct 402 Query: 563 ccttcaccaaagcgcaaagc 582 ||||||||||| || ||||| Sbjct: 401 ccttcaccaaaccgtaaagc 382 Score = 71.9 bits (36), Expect = 2e-09 Identities = 95/112 (84%), Gaps = 2/112 (1%) Strand = Plus / Minus Query: 238 gatgaccgcttcaacctctgcaggagtgtagaggtggt-agctgggggagacattcgcaa 296 |||||| ||||||||||| ||||||||||||||| | |||| || | ||| | |||| Sbjct: 726 gatgacggcttcaacctcctgaggagtgtagaggtgataagct-ggtgcgactctggcaa 668 Query: 297 tgtcaacattgtttggggtcaccttttcttccataacctgcttcaggataga 348 |||| ||||||||||| ||||||||||||||||| || ||||| |||||||| Sbjct: 667 tgtcgacattgtttggagtcaccttttcttccattacttgctttaggataga 616
>gb|AF043525.1|AF043525 Arabidopsis thaliana 20S proteasome subunit PAE2 (PAE2) mRNA, complete cds Length = 983 Score = 159 bits (80), Expect = 1e-35 Identities = 170/200 (85%) Strand = Plus / Minus Query: 383 tccttgttgtactgctcttgtaatgagctatcagctccttcagagcccgacccaattgcc 442 ||||||||| | |||||||| | || |||||||||||||| ||||| |||||||||||| Sbjct: 599 tccttgttgaattgctcttggagagaactatcagctccttctgagccagacccaattgcc 540 Query: 443 ttggcattgcactgccagaaggtcccagatgggtccgtgtagtacaagctgggtccattt 502 || |||||||| |||||||| || || ||||| || |||||||||| ||| ||||||||| Sbjct: 539 tttgcattgcattgccagaatgttcccgatggatctgtgtagtacaggctcggtccattt 480 Query: 503 tcatcatgaccagcaataaggagagagactccaaacggccgtgacattgattcttcatca 562 |||||||| |||||||| || || || |||||||| || || |||||||| ||||| || Sbjct: 479 tcatcatgcccagcaatgagaagggatactccaaatggacgagacattgactcttcctct 420 Query: 563 ccttcaccaaagcgcaaagc 582 ||||||||||| || ||||| Sbjct: 419 ccttcaccaaaccgtaaagc 400 Score = 79.8 bits (40), Expect = 9e-12 Identities = 96/112 (85%), Gaps = 2/112 (1%) Strand = Plus / Minus Query: 238 gatgaccgcttcaacctctgcaggagtgtagaggtggta-gctgggggagacattcgcaa 296 |||||| ||||||||||| ||||||||||||||| || ||||| | ||| || |||| Sbjct: 744 gatgacggcttcaacctcctgaggagtgtagaggtgataagctggtgc-gactttggcaa 686 Query: 297 tgtcaacattgtttggggtcaccttttcttccataacctgcttcaggataga 348 |||| ||||||||||| ||||||||||||||||| || ||||| |||||||| Sbjct: 685 tgtcgacattgtttggagtcaccttttcttccattacttgctttaggataga 634
>gb|BT014224.1| Lycopersicon esculentum clone 133419F, mRNA sequence Length = 1119 Score = 157 bits (79), Expect = 5e-35 Identities = 178/211 (84%) Strand = Plus / Minus Query: 383 tccttgttgtactgctcttgtaatgagctatcagctccttcagagcccgacccaattgcc 442 |||||||| |||||||| || || ||||||||||| |||||||| || |||||||| || Sbjct: 622 tccttgttatactgctcctgcaaagagctatcagcaccttcagaacctgacccaatagct 563 Query: 443 ttggcattgcactgccagaaggtcccagatgggtccgtgtagtacaagctgggtccattt 502 || |||||||| |||||||| || ||||| || || || |||||||||||||| ||||| Sbjct: 562 ttagcattgcattgccagaatgtaccagaaggatcagtatagtacaagctgggaccattc 503 Query: 503 tcatcatgaccagcaataaggagagagactccaaacggccgtgacattgattcttcatca 562 ||||||||||||||||| || || || || ||||| |||| ||||| ||||||||||| Sbjct: 502 tcatcatgaccagcaatgagaagggacacaccaaaaggcctggacatagattcttcatcg 443 Query: 563 ccttcaccaaagcgcaaagccaagtcacaga 593 || |||||||| ||||| ||||| ||||||| Sbjct: 442 ccctcaccaaatcgcaacgccaaatcacaga 412
>emb|BX822457.1|CNS0A63I Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB3ZB02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 868 Score = 151 bits (76), Expect = 3e-33 Identities = 169/200 (84%) Strand = Plus / Minus Query: 383 tccttgttgtactgctcttgtaatgagctatcagctccttcagagcccgacccaattgcc 442 ||||||||| | |||||||| | || |||||||||||||| ||||| |||||||||||| Sbjct: 595 tccttgttgaattgctcttggagagaactatcagctccttctgagccagacccaattgcc 536 Query: 443 ttggcattgcactgccagaaggtcccagatgggtccgtgtagtacaagctgggtccattt 502 || |||||||| |||||||| || || ||||| || |||||||||| ||| ||||||||| Sbjct: 535 tttgcattgcattgccagaatgttcccgatggatctgtgtagtacaggctcggtccattt 476 Query: 503 tcatcatgaccagcaataaggagagagactccaaacggccgtgacattgattcttcatca 562 |||||||| |||||||| || || || |||||||| || || |||||| | ||||| || Sbjct: 475 tcatcatgcccagcaatgagaagggatactccaaatggacgagacattaactcttcctct 416 Query: 563 ccttcaccaaagcgcaaagc 582 ||||||||||| || ||||| Sbjct: 415 ccttcaccaaaccgtaaagc 396 Score = 65.9 bits (33), Expect = 1e-07 Identities = 89/105 (84%), Gaps = 2/105 (1%) Strand = Plus / Minus Query: 245 gcttcaacctctgcaggagtgtagaggtggta-gctgggggagacattcgcaatgtcaac 303 ||||||||||| ||||||||||||||| || ||||| | ||| || |||||||| || Sbjct: 733 gcttcaacctcctgaggagtgtagaggtgataagctggtgc-gactttggcaatgtcgac 675 Query: 304 attgtttggggtcaccttttcttccataacctgcttcaggataga 348 ||||||||| || |||||||||||||| || ||||| |||||||| Sbjct: 674 attgtttggagtaaccttttcttccattacttgctttaggataga 630
>gb|AC120885.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0042J05, complete sequence Length = 150295 Score = 135 bits (68), Expect = 2e-28 Identities = 95/104 (91%) Strand = Plus / Plus Query: 384 ccttgttgtactgctcttgtaatgagctatcagctccttcagagcccgacccaattgcct 443 |||| ||||||||||| |||||||||||||||||||||||||| || || |||||||||| Sbjct: 101136 ccttattgtactgctcctgtaatgagctatcagctccttcagaacctgatccaattgcct 101195 Query: 444 tggcattgcactgccagaaggtcccagatgggtccgtgtagtac 487 |||||||||||||||| ||||| || |||||||| ||||||||| Sbjct: 101196 tggcattgcactgccaaaaggttcctgatgggtcagtgtagtac 101239 Score = 93.7 bits (47), Expect = 6e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 485 tacaagctgggtccattttcatcatgaccagcaataaggagagagactccaaacggccgt 544 ||||||||||||||||| ||||||||||||||||||||||||||||| ||||| || ||| Sbjct: 101895 tacaagctgggtccattctcatcatgaccagcaataaggagagagacaccaaatggtcgt 101954 Query: 545 gac 547 ||| Sbjct: 101955 gac 101957 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 317 accttttcttccataacctgcttcaggatagaaagggctatggtctctgcctc 369 ||||||||||||||||||||||||| |||||| |||||||||||||| ||||| Sbjct: 100678 accttttcttccataacctgcttcaagatagacagggctatggtctcagcctc 100730 Score = 69.9 bits (35), Expect = 9e-09 Identities = 77/91 (84%) Strand = Plus / Minus Query: 384 ccttgttgtactgctcttgtaatgagctatcagctccttcagagcccgacccaattgcct 443 |||| ||||||||||| ||||| ||||||||| | |||||| || || |||||||||| Sbjct: 88863 ccttattgtactgctcctgtaacaagctatcaggtgcttcaggacctgatccaattgcct 88804 Query: 444 tggcattgcactgccagaaggtcccagatgg 474 || ||||||| ||||| ||||| |||||||| Sbjct: 88803 tgtcattgcattgccaaaaggttccagatgg 88773 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 226 tcacaacctcgcgatgaccgcttcaacctctgcaggagtgtagaggtggtagctggg 282 |||||||| || ||||| ||||||||||||||||| ||||||||||||||| |||| Sbjct: 100488 tcacaaccgtgcaatgacagcttcaacctctgcaggggtgtagaggtggtagttggg 100544 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 554 tcttcatcaccttcaccaaagcgcaaagccaagtcacaga 593 |||||||||||||||||||| |||| ||| |||||||||| Sbjct: 102428 tcttcatcaccttcaccaaaacgcagagctaagtcacaga 102467
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 135 bits (68), Expect = 2e-28 Identities = 95/104 (91%) Strand = Plus / Plus Query: 384 ccttgttgtactgctcttgtaatgagctatcagctccttcagagcccgacccaattgcct 443 |||| ||||||||||| |||||||||||||||||||||||||| || || |||||||||| Sbjct: 23085133 ccttattgtactgctcctgtaatgagctatcagctccttcagaacctgatccaattgcct 23085192 Query: 444 tggcattgcactgccagaaggtcccagatgggtccgtgtagtac 487 |||||||||||||||| ||||| || |||||||| ||||||||| Sbjct: 23085193 tggcattgcactgccaaaaggttcctgatgggtcagtgtagtac 23085236 Score = 93.7 bits (47), Expect = 6e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 485 tacaagctgggtccattttcatcatgaccagcaataaggagagagactccaaacggccgt 544 ||||||||||||||||| ||||||||||||||||||||||||||||| ||||| || ||| Sbjct: 23085892 tacaagctgggtccattctcatcatgaccagcaataaggagagagacaccaaatggtcgt 23085951 Query: 545 gac 547 ||| Sbjct: 23085952 gac 23085954 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 317 accttttcttccataacctgcttcaggatagaaagggctatggtctctgcctc 369 ||||||||||||||||||||||||| |||||| |||||||||||||| ||||| Sbjct: 23084675 accttttcttccataacctgcttcaagatagacagggctatggtctcagcctc 23084727 Score = 69.9 bits (35), Expect = 9e-09 Identities = 77/91 (84%) Strand = Plus / Minus Query: 384 ccttgttgtactgctcttgtaatgagctatcagctccttcagagcccgacccaattgcct 443 |||| ||||||||||| ||||| ||||||||| | |||||| || || |||||||||| Sbjct: 23072860 ccttattgtactgctcctgtaacaagctatcaggtgcttcaggacctgatccaattgcct 23072801 Query: 444 tggcattgcactgccagaaggtcccagatgg 474 || ||||||| ||||| ||||| |||||||| Sbjct: 23072800 tgtcattgcattgccaaaaggttccagatgg 23072770 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 226 tcacaacctcgcgatgaccgcttcaacctctgcaggagtgtagaggtggtagctggg 282 |||||||| || ||||| ||||||||||||||||| ||||||||||||||| |||| Sbjct: 23084485 tcacaaccgtgcaatgacagcttcaacctctgcaggggtgtagaggtggtagttggg 23084541 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 554 tcttcatcaccttcaccaaagcgcaaagccaagtcacaga 593 |||||||||||||||||||| |||| ||| |||||||||| Sbjct: 23086425 tcttcatcaccttcaccaaaacgcagagctaagtcacaga 23086464
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 135 bits (68), Expect = 2e-28 Identities = 95/104 (91%) Strand = Plus / Plus Query: 384 ccttgttgtactgctcttgtaatgagctatcagctccttcagagcccgacccaattgcct 443 |||| ||||||||||| |||||||||||||||||||||||||| || || |||||||||| Sbjct: 23395043 ccttattgtactgctcctgtaatgagctatcagctccttcagaacctgatccaattgcct 23395102 Query: 444 tggcattgcactgccagaaggtcccagatgggtccgtgtagtac 487 |||||||||||||||| ||||| || |||||||| ||||||||| Sbjct: 23395103 tggcattgcactgccaaaaggttcctgatgggtcagtgtagtac 23395146 Score = 93.7 bits (47), Expect = 6e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 485 tacaagctgggtccattttcatcatgaccagcaataaggagagagactccaaacggccgt 544 ||||||||||||||||| ||||||||||||||||||||||||||||| ||||| || ||| Sbjct: 23395802 tacaagctgggtccattctcatcatgaccagcaataaggagagagacaccaaatggtcgt 23395861 Query: 545 gac 547 ||| Sbjct: 23395862 gac 23395864 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 317 accttttcttccataacctgcttcaggatagaaagggctatggtctctgcctc 369 ||||||||||||||||||||||||| |||||| |||||||||||||| ||||| Sbjct: 23394585 accttttcttccataacctgcttcaagatagacagggctatggtctcagcctc 23394637 Score = 69.9 bits (35), Expect = 9e-09 Identities = 77/91 (84%) Strand = Plus / Minus Query: 384 ccttgttgtactgctcttgtaatgagctatcagctccttcagagcccgacccaattgcct 443 |||| ||||||||||| ||||| ||||||||| | |||||| || || |||||||||| Sbjct: 23382770 ccttattgtactgctcctgtaacaagctatcaggtgcttcaggacctgatccaattgcct 23382711 Query: 444 tggcattgcactgccagaaggtcccagatgg 474 || ||||||| ||||| ||||| |||||||| Sbjct: 23382710 tgtcattgcattgccaaaaggttccagatgg 23382680 Score = 65.9 bits (33), Expect = 1e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 226 tcacaacctcgcgatgaccgcttcaacctctgcaggagtgtagaggtggtagctggg 282 |||||||| || ||||| ||||||||||||||||| ||||||||||||||| |||| Sbjct: 23394395 tcacaaccgtgcaatgacagcttcaacctctgcaggggtgtagaggtggtagttggg 23394451 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 554 tcttcatcaccttcaccaaagcgcaaagccaagtcacaga 593 |||||||||||||||||||| |||| ||| |||||||||| Sbjct: 23396335 tcttcatcaccttcaccaaaacgcagagctaagtcacaga 23396374
>emb|BX824071.1|CNS0A5L7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH1ZD09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1499 Score = 133 bits (67), Expect = 7e-28 Identities = 133/155 (85%) Strand = Plus / Minus Query: 383 tccttgttgtactgctcttgtaatgagctatcagctccttcagagcccgacccaattgcc 442 ||||||||| | |||||||| | || |||||||||||||| ||||| |||||||||||| Sbjct: 1184 tccttgttgaattgctcttggagagaactatcagctccttctgagccagacccaattgcc 1125 Query: 443 ttggcattgcactgccagaaggtcccagatgggtccgtgtagtacaagctgggtccattt 502 || |||||||| |||||||| || || ||||| || |||||||||| ||| ||||||||| Sbjct: 1124 tttgcattgcattgccagaatgttcccgatggatctgtgtagtacaggctcggtccattt 1065 Query: 503 tcatcatgaccagcaataaggagagagactccaaa 537 |||||||| |||||||| || || || |||||||| Sbjct: 1064 tcatcatgcccagcaatgagaagggatactccaaa 1030 Score = 71.9 bits (36), Expect = 2e-09 Identities = 95/112 (84%), Gaps = 2/112 (1%) Strand = Plus / Minus Query: 238 gatgaccgcttcaacctctgcaggagtgtagaggtggta-gctgggggagacattcgcaa 296 |||||| ||||||||||| ||||||||||||||| || ||||| | ||| || |||| Sbjct: 1329 gatgacggcttcaacctcctgaggagtgtagaggtgataagctggtgc-gactttggcaa 1271 Query: 297 tgtcaacattgtttggggtcaccttttcttccataacctgcttcaggataga 348 |||| ||||||||||| ||||||||||||||||| || ||||| ||| |||| Sbjct: 1270 tgtcgacattgtttggagtcaccttttcttccattacttgctttagggtaga 1219
>gb|AF255338.1|AF255338 Glycine max 20S proteasome subunit mRNA, complete cds Length = 966 Score = 131 bits (66), Expect = 3e-27 Identities = 126/146 (86%) Strand = Plus / Minus Query: 434 ccaattgccttggcattgcactgccagaaggtcccagatgggtccgtgtagtacaagctg 493 ||||| || ||| ||||||| ||||| || || |||||||| || |||||||| ||||| Sbjct: 519 ccaatagctttgccattgcattgccaaaatgtgccagatggatcagtgtagtataagcta 460 Query: 494 ggtccattttcatcatgaccagcaataaggagagagactccaaacggccgtgacattgat 553 |||||||| ||||||||||||||||| |||||||| |||||||| || || ||||| || Sbjct: 459 ggtccattctcatcatgaccagcaatgaggagagatactccaaatggtcgggacatggac 400 Query: 554 tcttcatcaccttcaccaaagcgcaa 579 |||||||||||||||||||| ||||| Sbjct: 399 tcttcatcaccttcaccaaaacgcaa 374 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 293 gcaatgtcaacattgtttggggtcaccttttcttccataacctgcttca 341 ||||||||||| ||||| || || ||||||||||||||||| ||||||| Sbjct: 660 gcaatgtcaacgttgttgggagtgaccttttcttccataacttgcttca 612
>dbj|AB022220.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MLN21 Length = 83906 Score = 87.7 bits (44), Expect = 4e-14 Identities = 89/104 (85%) Strand = Plus / Minus Query: 384 ccttgttgtactgctcttgtaatgagctatcagctccttcagagcccgacccaattgcct 443 |||||||| | |||||||| | || |||||||||||||| ||||| ||||||||||||| Sbjct: 30134 ccttgttgaattgctcttggagagaactatcagctccttctgagccagacccaattgcct 30075 Query: 444 tggcattgcactgccagaaggtcccagatgggtccgtgtagtac 487 | |||||||| |||||||| || || ||||| || ||||||||| Sbjct: 30074 ttgcattgcattgccagaatgttcccgatggatctgtgtagtac 30031 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 485 tacaagctgggtccattttcatcatgaccagcaataaggagagagactccaaa 537 |||| ||| ||||||||||||||||| |||||||| || || || |||||||| Sbjct: 29937 tacaggctcggtccattttcatcatgcccagcaatgagaagggatactccaaa 29885 Score = 48.1 bits (24), Expect = 0.033 Identities = 71/84 (84%), Gaps = 2/84 (2%) Strand = Plus / Minus Query: 238 gatgaccgcttcaacctctgcaggagtgtagaggtggt-agctgggggagacattcgcaa 296 |||||| ||||||||||| ||||||||||||||| | |||| || | ||| || |||| Sbjct: 30467 gatgacggcttcaacctcctgaggagtgtagaggtgataagct-ggtgcgactttggcaa 30409 Query: 297 tgtcaacattgtttggggtcacct 320 |||| ||||||||||| ||||||| Sbjct: 30408 tgtcgacattgtttggagtcacct 30385 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 317 accttttcttccataacctgcttcaggataga 348 |||||||||||||| || ||||| |||||||| Sbjct: 30295 accttttcttccattacttgctttaggataga 30264
>gb|AC009324.2| Arabidopsis thaliana chromosome I BAC T18A20 genomic sequence, complete sequence Length = 85413 Score = 83.8 bits (42), Expect = 6e-13 Identities = 87/102 (85%) Strand = Plus / Plus Query: 386 ttgttgtactgctcttgtaatgagctatcagctccttcagagcccgacccaattgccttg 445 |||||| | |||||||| | |||||||||||||||||||| || || ||||||||||| Sbjct: 39694 ttgttgaattgctcttgaagagagctatcagctccttcagaacctgaaccaattgccttt 39753 Query: 446 gcattgcactgccagaaggtcccagatgggtccgtgtagtac 487 ||||||||||||||||| || || || || || ||||||||| Sbjct: 39754 gcattgcactgccagaatgttcctgaaggatcagtgtagtac 39795 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 485 tacaagctgggtccattttcatcatgaccagcaataaggagagagactccaaacggccg 543 |||||||| ||||||||||||||||| |||||||| || ||||| |||||||||||||| Sbjct: 39885 tacaagcttggtccattttcatcatggccagcaatgagaagagatactccaaacggccg 39943 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 317 accttttcttccataacctgcttcaggataga 348 ||||||||||||||||| ||||| |||||||| Sbjct: 39529 accttttcttccataacttgctttaggataga 39560 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 547 cattgattcttcatcaccttcaccaaagcgcaaagcca 584 |||||||||||| || ||||||||||| || ||||||| Sbjct: 40060 cattgattcttcctctccttcaccaaaccgtaaagcca 40097
>emb|AJ418041.1|PPA418041 Physcomitrella patens mRNA for 20S proteasome subunit alpha V (zeta gene) Length = 952 Score = 81.8 bits (41), Expect = 2e-12 Identities = 104/125 (83%) Strand = Plus / Minus Query: 434 ccaattgccttggcattgcactgccagaaggtcccagatgggtccgtgtagtacaagctg 493 ||||||||||| |||| || ||||| || || |||||||| || |||| |||||||| Sbjct: 586 ccaattgccttagcatcacattgccaaaatgttccagatggatctgtgtggtacaagcat 527 Query: 494 ggtccattttcatcatgaccagcaataaggagagagactccaaacggccgtgacattgat 553 |||||| | |||||||| |||||||| || ||||| ||||| || || |||||||||||| Sbjct: 526 ggtccactctcatcatggccagcaatgagcagagaaactccgaaaggacgtgacattgat 467 Query: 554 tcttc 558 ||||| Sbjct: 466 tcttc 462
>gb|U25649.1|ATU25649 Arabidopsis thaliana putative pectin methylesterase (ATPME2) gene, partial cds, and (ATPME1) gene, complete cds Length = 5873 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 317 accttttcttccataacctgcttcaggataga 348 ||||||||||||||||| ||||| |||||||| Sbjct: 5714 accttttcttccataacttgctttaggataga 5745
>gb|AC124464.3| Mus musculus BAC clone RP24-155I15 from chromosome 19, complete sequence Length = 188587 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 338 ttcaggatagaaagggctatggt 360 ||||||||||||||||||||||| Sbjct: 35064 ttcaggatagaaagggctatggt 35086
>gb|AC126266.3| Mus musculus BAC clone RP23-402N17 from chromosome 19, complete sequence Length = 205037 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 338 ttcaggatagaaagggctatggt 360 ||||||||||||||||||||||| Sbjct: 180084 ttcaggatagaaagggctatggt 180106
>gb|L23648.1| Caenorhabditis elegans cosmid F44B9, complete sequence Length = 36327 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 68 ctggctggaatgctgaaaaataattct 94 |||| |||||||||||||||||||||| Sbjct: 15724 ctgggtggaatgctgaaaaataattct 15750
>gb|AC012308.12| Homo sapiens chromosome 10 clone RP11-5G18, complete sequence Length = 163816 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 29 gaaccaacacacacaaatgcag 50 |||||||||||||||||||||| Sbjct: 11851 gaaccaacacacacaaatgcag 11830
>gb|AC093765.3| Homo sapiens BAC clone RP11-97F8 from 4, complete sequence Length = 177059 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 408 agctatcagctccttcagagcc 429 |||||||||||||||||||||| Sbjct: 133968 agctatcagctccttcagagcc 133989
>gb|AC025972.6|AC025972 Homo sapiens chromosome 11, clone RP11-6K5, complete sequence Length = 165962 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 ataacctgcttcaggatagaa 349 ||||||||||||||||||||| Sbjct: 111611 ataacctgcttcaggatagaa 111591
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 236 gcgatgaccgcttcaacctctgcaggagtgtagaggtggta 276 |||||||| || || ||||||| ||| |||||||||||||| Sbjct: 18912624 gcgatgacggcctcgacctctgtaggggtgtagaggtggta 18912664
>gb|BC090701.1| Danio rerio cDNA clone IMAGE:7140566 Length = 2815 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 7 tttagtagtagagatgtttta 27 ||||||||||||||||||||| Sbjct: 2532 tttagtagtagagatgtttta 2512
>emb|CR854847.7| Zebrafish DNA sequence from clone DKEY-266L9 in linkage group 11, complete sequence Length = 48855 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 7 tttagtagtagagatgtttta 27 ||||||||||||||||||||| Sbjct: 33052 tttagtagtagagatgtttta 33072
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 236 gcgatgaccgcttcaacctctgcaggagtgtagaggtggta 276 |||||||| || || ||||||| ||| |||||||||||||| Sbjct: 18838851 gcgatgacggcctcgacctctgtaggggtgtagaggtggta 18838891
>emb|AL831808.4|CNS08CAL Oryza sativa chromosome 12, . BAC OSJNBa0028H02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 153064 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 236 gcgatgaccgcttcaacctctgcaggagtgtagaggtggta 276 |||||||| || || ||||||| ||| |||||||||||||| Sbjct: 57755 gcgatgacggcctcgacctctgtaggggtgtagaggtggta 57715
>emb|BX255875.3|CNS09S4W Oryza sativa chromosome 12, . BAC OSJNBa0018L16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151203 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 236 gcgatgaccgcttcaacctctgcaggagtgtagaggtggta 276 |||||||| || || ||||||| ||| |||||||||||||| Sbjct: 8741 gcgatgacggcctcgacctctgtaggggtgtagaggtggta 8781
>ref|NM_105712.1| Arabidopsis thaliana SRO3 AT1G70440 (SRO3) mRNA, complete cds Length = 918 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 553 ttcttcatcaccttcaccaa 572 |||||||||||||||||||| Sbjct: 492 ttcttcatcaccttcaccaa 473
>ref|NM_148976.1| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 1 (PSMA1), transcript variant 1, mRNA Length = 1480 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 503 tcatcatgaccagcaataaggaga 526 ||||||| |||||||||||||||| Sbjct: 761 tcatcataaccagcaataaggaga 738
>ref|NM_002786.2| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 1 (PSMA1), transcript variant 2, mRNA Length = 1238 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 503 tcatcatgaccagcaataaggaga 526 ||||||| |||||||||||||||| Sbjct: 519 tcatcataaccagcaataaggaga 496
>ref|XM_803137.1| Trypanosoma cruzi strain CL Brener proteasome alpha 5 subunit (Tc00.1047053511145.43) partial mRNA Length = 738 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 322 ttcttccataacctgcttcaggat 345 ||||||||| |||||||||||||| Sbjct: 624 ttcttccatcacctgcttcaggat 601
>ref|XM_806426.1| Trypanosoma cruzi strain CL Brener proteasome alpha 5 subunit (Tc00.1047053504069.53) partial mRNA Length = 738 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 322 ttcttccataacctgcttcaggat 345 ||||||||| |||||||||||||| Sbjct: 624 ttcttccatcacctgcttcaggat 601
>gb|AC144389.22| Medicago truncatula clone mth2-25e14, complete sequence Length = 127170 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 495 gtccattttcatcatgacca 514 |||||||||||||||||||| Sbjct: 109939 gtccattttcatcatgacca 109958
>emb|AL645698.1| Human DNA sequence from clone RP5-1070D5 on chromosome 1, complete sequence Length = 15023 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 cctgcttcaggatagaaagg 352 |||||||||||||||||||| Sbjct: 6684 cctgcttcaggatagaaagg 6703
>emb|AL590115.7| Human DNA sequence from clone RP11-255O17 on chromosome 1 Contains a novel gene, the LHX9 gene for LIM homeobox 9 and a CpG island, complete sequence Length = 182527 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 tgaaaaataattctttttgg 100 |||||||||||||||||||| Sbjct: 37692 tgaaaaataattctttttgg 37711
>emb|X73293.1|MVRPO M.vannielii genes rpoH, rpoB and rpoA Length = 7960 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 553 ttcttcatcaccttcaccaa 572 |||||||||||||||||||| Sbjct: 965 ttcttcatcaccttcaccaa 946
>emb|X61969.1|HSMPNU H.sapiens mRNA for macropain subunit nu Length = 1244 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 503 tcatcatgaccagcaataaggaga 526 ||||||| |||||||||||||||| Sbjct: 521 tcatcataaccagcaataaggaga 498
>gb|BC022372.1| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 1, transcript variant 2, mRNA (cDNA clone MGC:23915 IMAGE:4770620), complete cds Length = 1167 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 503 tcatcatgaccagcaataaggaga 526 ||||||| |||||||||||||||| Sbjct: 449 tcatcataaccagcaataaggaga 426
>gb|BC009576.1| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 1, transcript variant 2, mRNA (cDNA clone MGC:14575 IMAGE:4105838), complete cds Length = 958 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 503 tcatcatgaccagcaataaggaga 526 ||||||| |||||||||||||||| Sbjct: 470 tcatcataaccagcaataaggaga 447
>gb|BC015105.1| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 1, transcript variant 2, mRNA (cDNA clone MGC:22853 IMAGE:3950568), complete cds Length = 1218 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 503 tcatcatgaccagcaataaggaga 526 ||||||| |||||||||||||||| Sbjct: 496 tcatcataaccagcaataaggaga 473
>gb|BC015356.1| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 1, transcript variant 2, mRNA (cDNA clone MGC:21459 IMAGE:3452219), complete cds Length = 1169 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 503 tcatcatgaccagcaataaggaga 526 ||||||| |||||||||||||||| Sbjct: 465 tcatcataaccagcaataaggaga 442
>gb|BC002577.2| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 1, transcript variant 2, mRNA (cDNA clone MGC:1667 IMAGE:3140784), complete cds Length = 1219 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 503 tcatcatgaccagcaataaggaga 526 ||||||| |||||||||||||||| Sbjct: 481 tcatcataaccagcaataaggaga 458
>gb|BC008472.1| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 1, transcript variant 2, mRNA (cDNA clone MGC:14751 IMAGE:4282076), complete cds Length = 1174 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 503 tcatcatgaccagcaataaggaga 526 ||||||| |||||||||||||||| Sbjct: 462 tcatcataaccagcaataaggaga 439
>gb|BC005932.1| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 1, transcript variant 2, mRNA (cDNA clone MGC:14542 IMAGE:4078894), complete cds Length = 1215 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 503 tcatcatgaccagcaataaggaga 526 ||||||| |||||||||||||||| Sbjct: 497 tcatcataaccagcaataaggaga 474
>emb|AJ295252.1|TCR295252 Trypanosoma cruzi mRNA for proteasome subunit alpha5 (PRCZ gene) Length = 910 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 322 ttcttccataacctgcttcaggat 345 ||||||||| |||||||||||||| Sbjct: 650 ttcttccatcacctgcttcaggat 627
>gb|BT008064.1| Synthetic construct Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 1 mRNA, partial cds Length = 792 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 503 tcatcatgaccagcaataaggaga 526 ||||||| |||||||||||||||| Sbjct: 416 tcatcataaccagcaataaggaga 393
>gb|BT006647.1| Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 1 mRNA, complete cds Length = 792 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 503 tcatcatgaccagcaataaggaga 526 ||||||| |||||||||||||||| Sbjct: 416 tcatcataaccagcaataaggaga 393
>emb|AL603913.14| Mouse DNA sequence from clone RP23-103H9 on chromosome 11 Contains the gene for a novel protein (3732413I11Rik), a novel gene (4930597A21Rik), the 5' end of the Ebf1 gene for early B-cell factor 1, a novel gene and a CpG island, complete sequence Length = 215524 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 taaacaaacgaatgactgga 144 |||||||||||||||||||| Sbjct: 158298 taaacaaacgaatgactgga 158279
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 ctatggtctctgcctcagcg 373 |||||||||||||||||||| Sbjct: 2859001 ctatggtctctgcctcagcg 2858982
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 caattccttgttgtactgct 398 |||||||||||||||||||| Sbjct: 735040 caattccttgttgtactgct 735059
>gb|AC023723.4| Drosophila melanogaster X BAC RP98-48E6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179363 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 gtttggggtcaccttttctt 326 |||||||||||||||||||| Sbjct: 59604 gtttggggtcaccttttctt 59585
>gb|AC023709.4| Drosophila melanogaster X BAC RP98-10I17 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 163710 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 gtttggggtcaccttttctt 326 |||||||||||||||||||| Sbjct: 157651 gtttggggtcaccttttctt 157632
>emb|CR623849.1| full-length cDNA clone CS0DA006YP22 of Neuroblastoma of Homo sapiens (human) Length = 1156 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 503 tcatcatgaccagcaataaggaga 526 ||||||| |||||||||||||||| Sbjct: 491 tcatcataaccagcaataaggaga 468
>emb|CR620774.1| full-length cDNA clone CS0DI030YJ03 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1146 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 503 tcatcatgaccagcaataaggaga 526 ||||||| |||||||||||||||| Sbjct: 454 tcatcataaccagcaataaggaga 431
>emb|CR617103.1| full-length cDNA clone CS0DI052YO22 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1129 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 503 tcatcatgaccagcaataaggaga 526 ||||||| |||||||||||||||| Sbjct: 473 tcatcataaccagcaataaggaga 450
>emb|CR612800.1| full-length cDNA clone CS0DA012YD16 of Neuroblastoma of Homo sapiens (human) Length = 1218 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 503 tcatcatgaccagcaataaggaga 526 ||||||| |||||||||||||||| Sbjct: 551 tcatcataaccagcaataaggaga 528
>emb|CR610121.1| full-length cDNA clone CS0DI083YG05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1144 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 503 tcatcatgaccagcaataaggaga 526 ||||||| |||||||||||||||| Sbjct: 457 tcatcataaccagcaataaggaga 434
>emb|CR607472.1| full-length cDNA clone CS0DB001YP20 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1527 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 503 tcatcatgaccagcaataaggaga 526 ||||||| |||||||||||||||| Sbjct: 872 tcatcataaccagcaataaggaga 849
>emb|CR607412.1| full-length cDNA clone CS0DE014YI10 of Placenta of Homo sapiens (human) Length = 1165 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 503 tcatcatgaccagcaataaggaga 526 ||||||| |||||||||||||||| Sbjct: 480 tcatcataaccagcaataaggaga 457
>emb|CR599736.1| full-length cDNA clone CS0DK007YL19 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1105 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 503 tcatcatgaccagcaataaggaga 526 ||||||| |||||||||||||||| Sbjct: 414 tcatcataaccagcaataaggaga 391
>emb|CR599649.1| full-length cDNA clone CS0DI069YC24 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1133 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 503 tcatcatgaccagcaataaggaga 526 ||||||| |||||||||||||||| Sbjct: 459 tcatcataaccagcaataaggaga 436
>emb|CR598938.1| full-length cDNA clone CS0DI075YJ10 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1090 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 503 tcatcatgaccagcaataaggaga 526 ||||||| |||||||||||||||| Sbjct: 414 tcatcataaccagcaataaggaga 391
>emb|CR597642.1| full-length cDNA clone CL0BB027ZF05 of Neuroblastoma of Homo sapiens (human) Length = 1143 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 503 tcatcatgaccagcaataaggaga 526 ||||||| |||||||||||||||| Sbjct: 454 tcatcataaccagcaataaggaga 431
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 98 tggtggtacaacgtcttagtgcta 121 ||||||||| |||||||||||||| Sbjct: 535253 tggtggtaccacgtcttagtgcta 535276
>gb|AF155766.1| Pisum sativum clone Psat27-29 repetitive sequence Length = 2089 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 tcttcatcaccttcaccaaa 573 |||||||||||||||||||| Sbjct: 2066 tcttcatcaccttcaccaaa 2085
>ref|NM_079730.2| Drosophila melanogaster klingon CG6669-RA (klg), mRNA Length = 4037 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 attctttttggtggtacaac 109 |||||||||||||||||||| Sbjct: 3269 attctttttggtggtacaac 3250
>gb|AY060363.1| Drosophila melanogaster LD10776 full length cDNA Length = 4052 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 attctttttggtggtacaac 109 |||||||||||||||||||| Sbjct: 3269 attctttttggtggtacaac 3250
>gb|AC150443.2| Medicago truncatula chromosome 7 BAC clone mth2-71o19, complete sequence Length = 132097 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 495 gtccattttcatcatgacca 514 |||||||||||||||||||| Sbjct: 4086 gtccattttcatcatgacca 4105
>gb|U78177.1|DMU78177 Drosophila melanogaster Klingon (klingon) mRNA, complete cds Length = 3927 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 attctttttggtggtacaac 109 |||||||||||||||||||| Sbjct: 3159 attctttttggtggtacaac 3178
>gb|AC008199.4|AC008199 Drosophila melanogaster, chromosome 3R, region 94D-94D, BAC clone BACR01K08, complete sequence Length = 177127 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 attctttttggtggtacaac 109 |||||||||||||||||||| Sbjct: 52886 attctttttggtggtacaac 52867
>gb|AY892634.1| Synthetic construct Homo sapiens clone FLH015536.01L proteasome alpha type subunit 1 (PSMA1) mRNA, partial cds Length = 792 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 503 tcatcatgaccagcaataaggaga 526 ||||||| |||||||||||||||| Sbjct: 416 tcatcataaccagcaataaggaga 393
>gb|AY890152.1| Synthetic construct Homo sapiens clone FLH015541.01X proteasome subunit alpha type 1 (PSMA1) mRNA, complete cds Length = 792 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 503 tcatcatgaccagcaataaggaga 526 ||||||| |||||||||||||||| Sbjct: 416 tcatcataaccagcaataaggaga 393
>gb|AY890151.1| Synthetic construct Homo sapiens clone FLH015540.01X proteasome subunit alpha type 1 (PSMA1) mRNA, complete cds Length = 792 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 503 tcatcatgaccagcaataaggaga 526 ||||||| |||||||||||||||| Sbjct: 416 tcatcataaccagcaataaggaga 393
>gb|AE003741.2| Drosophila melanogaster chromosome 3R, section 79 of 118 of the complete sequence Length = 233356 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 attctttttggtggtacaac 109 |||||||||||||||||||| Sbjct: 80784 attctttttggtggtacaac 80765
>gb|AE003451.5| Drosophila melanogaster chromosome X, section 35 of 74 of the complete sequence Length = 285729 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 gtttggggtcaccttttctt 326 |||||||||||||||||||| Sbjct: 85095 gtttggggtcaccttttctt 85114
>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome Length = 2178400 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 accgcttcaacctctgcagg 261 |||||||||||||||||||| Sbjct: 1363782 accgcttcaacctctgcagg 1363801
>dbj|D00759.1|HUMPSC2 Homo sapiens mRNA for proteasome subunit C2, complete cds Length = 1105 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 503 tcatcatgaccagcaataaggaga 526 ||||||| |||||||||||||||| Sbjct: 457 tcatcataaccagcaataaggaga 434
>gb|AE000657.1| Aquifex aeolicus VF5, complete genome Length = 1551335 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 338 ttcaggatagaaagggctat 357 |||||||||||||||||||| Sbjct: 775357 ttcaggatagaaagggctat 775338
>gb|AC003671.1|F17O7 Arabidopsis thaliana chromosome 1 BAC F17O7 complete sequence Length = 92128 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 553 ttcttcatcaccttcaccaa 572 |||||||||||||||||||| Sbjct: 4672 ttcttcatcaccttcaccaa 4653
>gb|M64992.1|HUMPROS30 Human prosomal protein P30-33K (pros-30) mRNA, complete cds Length = 1264 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 503 tcatcatgaccagcaataaggaga 526 ||||||| |||||||||||||||| Sbjct: 761 tcatcataaccagcaataaggaga 738 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,139,243 Number of Sequences: 3902068 Number of extensions: 6139243 Number of successful extensions: 110034 Number of sequences better than 10.0: 96 Number of HSP's better than 10.0 without gapping: 96 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 109669 Number of HSP's gapped (non-prelim): 360 length of query: 593 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 570 effective length of database: 17,143,297,704 effective search space: 9771679691280 effective search space used: 9771679691280 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
