ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd17e11 |
|---|---|
| Clone Library Name | barley_pub |
>PSB3_ORYSA (Q9LST7) Proteasome subunit beta type 3 (EC 3.4.25.1) (20S| proteasome alpha subunit C) (20S proteasome subunit beta-3) Length = 204 Score = 270 bits (690), Expect = 3e-72 Identities = 128/142 (90%), Positives = 139/142 (97%) Frame = -1 Query: 649 LYQRLVFKHKLYQLREERDMKPETFASLVSSMLYEKRFGPYFCQPIIAGLGQDDEPFICT 470 LYQRLVF+HKLYQLREERDMKP+TFASLVS++LYEKRFGPYFCQP+IAGLG+D+EPFICT Sbjct: 63 LYQRLVFRHKLYQLREERDMKPQTFASLVSALLYEKRFGPYFCQPVIAGLGEDNEPFICT 122 Query: 469 MDCIGAKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALLSSVDRDCLSGW 290 MDCIGAKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQAL SSVDRDCLSGW Sbjct: 123 MDCIGAKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALQSSVDRDCLSGW 182 Query: 289 GGYVLIVTATEVQERVLKGRMD 224 GG+VL+VT TEV+E V+KGRMD Sbjct: 183 GGFVLLVTPTEVKECVIKGRMD 204
>PSB3A_ARATH (Q9XI05) Proteasome subunit beta type 3-A (EC 3.4.25.1) (20S| proteasome beta subunit C-1) (Proteasome component T) Length = 204 Score = 262 bits (669), Expect = 7e-70 Identities = 125/142 (88%), Positives = 136/142 (95%) Frame = -1 Query: 649 LYQRLVFKHKLYQLREERDMKPETFASLVSSMLYEKRFGPYFCQPIIAGLGQDDEPFICT 470 LYQRLVF+HKLYQLREERDMKPETFASLVS++LYEKRFGPY CQP+IAGLG DD+PFICT Sbjct: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYLCQPVIAGLGDDDKPFICT 122 Query: 469 MDCIGAKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALLSSVDRDCLSGW 290 MD IGAKELAKDFVVSGTASESLYGACE+MYKP+ME EELFETISQALLSSVDRDCLSGW Sbjct: 123 MDSIGAKELAKDFVVSGTASESLYGACEAMYKPDMEAEELFETISQALLSSVDRDCLSGW 182 Query: 289 GGYVLIVTATEVQERVLKGRMD 224 GG+V IVT TE++ER+LKGRMD Sbjct: 183 GGHVYIVTPTEIKERILKGRMD 204
>PSB3B_ARATH (O81153) Proteasome subunit beta type 3-B (EC 3.4.25.1) (20S| proteasome beta subunit C-2) Length = 204 Score = 254 bits (650), Expect = 1e-67 Identities = 121/142 (85%), Positives = 135/142 (95%) Frame = -1 Query: 649 LYQRLVFKHKLYQLREERDMKPETFASLVSSMLYEKRFGPYFCQPIIAGLGQDDEPFICT 470 LYQRLVF+HKLYQLREERDMKPETFASLVS++LYEKRFGP+ CQP+IAGLG D++PFICT Sbjct: 63 LYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPFLCQPVIAGLGDDNKPFICT 122 Query: 469 MDCIGAKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALLSSVDRDCLSGW 290 MD IGAKELAKDFVVSGTASESLYGACE+M+KP+ME EELFETISQALLSSVDRDCLSGW Sbjct: 123 MDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEAEELFETISQALLSSVDRDCLSGW 182 Query: 289 GGYVLIVTATEVQERVLKGRMD 224 GG+V +VT EV+ER+LKGRMD Sbjct: 183 GGHVYVVTPKEVKERILKGRMD 204
>PSB3_PICMA (O65084) Proteasome subunit beta type 3 (EC 3.4.25.1) (20S| proteasome alpha subunit C) (20S proteasome subunit beta-3) Length = 204 Score = 253 bits (647), Expect = 3e-67 Identities = 118/142 (83%), Positives = 134/142 (94%) Frame = -1 Query: 649 LYQRLVFKHKLYQLREERDMKPETFASLVSSMLYEKRFGPYFCQPIIAGLGQDDEPFICT 470 LYQR F+HKLYQLREER+M+PETFASLVS++LYEKRFGPYFCQP+IAGLG+DD+PFICT Sbjct: 63 LYQRFAFRHKLYQLREERNMRPETFASLVSALLYEKRFGPYFCQPVIAGLGEDDKPFICT 122 Query: 469 MDCIGAKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALLSSVDRDCLSGW 290 MD IGAKELAKDFVV+GTA+ESLYGACESMYKP+MEPEELFETISQALLSS+DRDCLSGW Sbjct: 123 MDSIGAKELAKDFVVAGTAAESLYGACESMYKPDMEPEELFETISQALLSSIDRDCLSGW 182 Query: 289 GGYVLIVTATEVQERVLKGRMD 224 GG+V +V+ +V ER LKGRMD Sbjct: 183 GGHVYVVSPNQVIERTLKGRMD 204
>PSB3_SCHPO (Q9Y7T8) Probable proteasome subunit beta type 3 (EC 3.4.25.1)| Length = 204 Score = 186 bits (471), Expect = 7e-47 Identities = 84/142 (59%), Positives = 113/142 (79%) Frame = -1 Query: 649 LYQRLVFKHKLYQLREERDMKPETFASLVSSMLYEKRFGPYFCQPIIAGLGQDDEPFICT 470 LY+ +K LY+ REER ++P+TFA+LVSS LYEKRFGPYF P++AG+ D+ PFIC Sbjct: 63 LYELFRYKVNLYKFREERQIQPKTFANLVSSTLYEKRFGPYFSFPVVAGVSNDNTPFICG 122 Query: 469 MDCIGAKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALLSSVDRDCLSGW 290 D IG + A+DF+VSGTA+E LYG CES+Y+PN+EP++LFETISQALL++ DRDC+SGW Sbjct: 123 FDSIGCIDFAEDFIVSGTATEQLYGMCESVYEPNLEPDDLFETISQALLNAQDRDCISGW 182 Query: 289 GGYVLIVTATEVQERVLKGRMD 224 G V ++TA + +R++KGR D Sbjct: 183 GCVVYVITADKCIKRLVKGRQD 204
>PSB3_YEAST (P25451) Proteasome component PUP3 (EC 3.4.25.1) (Macropain subunit| PUP3) (Multicatalytic endopeptidase complex subunit PUP3) Length = 205 Score = 168 bits (426), Expect = 1e-41 Identities = 81/137 (59%), Positives = 104/137 (75%), Gaps = 1/137 (0%) Frame = -1 Query: 631 FKHKLYQLREERDMKPETFASLVSSMLYEKRFGPYFCQPIIAGLG-QDDEPFICTMDCIG 455 +K LY+L+EER ++PETF LVSS LYE+RFGPYF P++AG+ + +PFI D IG Sbjct: 69 YKTNLYKLKEERAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIAGFDLIG 128 Query: 454 AKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALLSSVDRDCLSGWGGYVL 275 + AKDF+VSGTAS+ L+G CES+Y+PN+EPE+LFETISQALL++ DRD LSGWG V Sbjct: 129 CIDEAKDFIVSGTASDQLFGMCESLYEPNLEPEDLFETISQALLNAADRDALSGWGAVVY 188 Query: 274 IVTATEVQERVLKGRMD 224 I+ EV +R LK R D Sbjct: 189 IIKKDEVVKRYLKMRQD 205
>PSB3_ONCMY (O73817) Proteasome subunit beta type 3 (EC 3.4.25.1) (Proteasome| theta chain) (Proteasome chain 13) (Proteasome component C10-II) Length = 205 Score = 168 bits (426), Expect = 1e-41 Identities = 79/141 (56%), Positives = 109/141 (77%), Gaps = 1/141 (0%) Frame = -1 Query: 643 QRLVFKHKLYQLREERDMKPETFASLVSSMLYEKRFGPYFCQPIIAGLGQDD-EPFICTM 467 QRL F+ LY+L+E R +KP+TF S+VS++LYE+RFGPY+ +P+IAGL EPFIC++ Sbjct: 65 QRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPFICSL 124 Query: 466 DCIGAKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALLSSVDRDCLSGWG 287 D IG + +DFVVSGT SE +YG CES+++P+MEPE+LFETISQA+L++VDRD +SG G Sbjct: 125 DLIGCPMVTEDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAMLNAVDRDAVSGMG 184 Query: 286 GYVLIVTATEVQERVLKGRMD 224 V ++ ++ R LK RMD Sbjct: 185 VVVQVIEKDKITTRTLKARMD 205
>PSB3_RAT (P40112) Proteasome subunit beta type 3 (EC 3.4.25.1) (Proteasome| theta chain) (Proteasome chain 13) (Proteasome component C10-II) Length = 205 Score = 162 bits (411), Expect = 6e-40 Identities = 78/141 (55%), Positives = 105/141 (74%), Gaps = 1/141 (0%) Frame = -1 Query: 643 QRLVFKHKLYQLREERDMKPETFASLVSSMLYEKRFGPYFCQPIIAGLGQDD-EPFICTM 467 QRL F+ LY+L+E R +KP T S+V+++LYEKRFGPY+ +P+IAGL +PFIC++ Sbjct: 65 QRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSL 124 Query: 466 DCIGAKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALLSSVDRDCLSGWG 287 D IG + DFVVSGT SE +YG CES+++PNM+PE LFETISQA+L++VDRD +SG G Sbjct: 125 DLIGCPMVTDDFVVSGTCSEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAVSGMG 184 Query: 286 GYVLIVTATEVQERVLKGRMD 224 V I+ ++ R LK RMD Sbjct: 185 VIVHIIEKDKITTRTLKARMD 205
>PSB3_MOUSE (Q9R1P1) Proteasome subunit beta type 3 (EC 3.4.25.1) (Proteasome| theta chain) (Proteasome chain 13) (Proteasome component C10-II) Length = 205 Score = 162 bits (410), Expect = 8e-40 Identities = 77/141 (54%), Positives = 105/141 (74%), Gaps = 1/141 (0%) Frame = -1 Query: 643 QRLVFKHKLYQLREERDMKPETFASLVSSMLYEKRFGPYFCQPIIAGLGQDD-EPFICTM 467 QRL F+ LY+L+E R +KP T S+V+++LYEKRFGPY+ +P+IAGL +PFIC++ Sbjct: 65 QRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSL 124 Query: 466 DCIGAKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALLSSVDRDCLSGWG 287 D IG + DFVVSGT SE +YG CES+++PNM+PE LFETISQA+L++VDRD +SG G Sbjct: 125 DLIGCPMVTDDFVVSGTCSEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAVSGMG 184 Query: 286 GYVLIVTATEVQERVLKGRMD 224 V ++ ++ R LK RMD Sbjct: 185 VIVHVIEKDKITTRTLKARMD 205
>PSB3_DROME (Q9XYN7) Proteasome subunit beta type 3 (EC 3.4.25.1) (20S| proteasome subunit beta-3) Length = 205 Score = 160 bits (406), Expect = 2e-39 Identities = 72/140 (51%), Positives = 103/140 (73%), Gaps = 1/140 (0%) Frame = -1 Query: 640 RLVFKHKLYQLREERDMKPETFASLVSSMLYEKRFGPYFCQPIIAGLGQDD-EPFICTMD 464 RL+F+ LY+ RE R+M P+ F++++SS LYE RFGPYF +P++AGL EPFIC MD Sbjct: 66 RLMFRKNLYETRENREMCPKPFSAMMSSFLYEHRFGPYFIEPVVAGLDPKTMEPFICNMD 125 Query: 463 CIGAKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALLSSVDRDCLSGWGG 284 IG DFVV+GT +E LYG CE+++KP++EP++LFE I+Q+++++ DRD +SGWG Sbjct: 126 LIGCPNAPDDFVVAGTCAEQLYGMCETLWKPDLEPDQLFEVIAQSIVNAFDRDAMSGWGA 185 Query: 283 YVLIVTATEVQERVLKGRMD 224 V I+ ++ ER LK RMD Sbjct: 186 TVYIIEKDKITERTLKTRMD 205
>PSB3_HUMAN (P49720) Proteasome subunit beta type 3 (EC 3.4.25.1) (Proteasome| theta chain) (Proteasome chain 13) (Proteasome component C10-II) Length = 205 Score = 160 bits (405), Expect = 3e-39 Identities = 76/141 (53%), Positives = 105/141 (74%), Gaps = 1/141 (0%) Frame = -1 Query: 643 QRLVFKHKLYQLREERDMKPETFASLVSSMLYEKRFGPYFCQPIIAGLGQDD-EPFICTM 467 QRL F+ LY+L+E R +KP T S+V+++LYEKRFGPY+ +P+IAGL +PFIC++ Sbjct: 65 QRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSL 124 Query: 466 DCIGAKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALLSSVDRDCLSGWG 287 D IG + DFVVSGT +E +YG CES+++PNM+P+ LFETISQA+L++VDRD +SG G Sbjct: 125 DLIGCPMVTDDFVVSGTCAEQMYGMCESLWEPNMDPDHLFETISQAMLNAVDRDAVSGMG 184 Query: 286 GYVLIVTATEVQERVLKGRMD 224 V I+ ++ R LK RMD Sbjct: 185 VIVHIIEKDKITTRTLKARMD 205
>PSB3_TRYBB (Q9NDA1) Proteasome subunit beta type 3 (EC 3.4.25.1) (20S| proteasome subunit beta-3) Length = 205 Score = 145 bits (365), Expect = 1e-34 Identities = 69/141 (48%), Positives = 103/141 (73%), Gaps = 1/141 (0%) Frame = -1 Query: 643 QRLVFKHKLYQLREERDMKPETFASLVSSMLYEKRFGPYFCQPIIAGLGQDD-EPFICTM 467 Q++ F+ ++Y+LREERD+ + FA+LVSSMLYE RFGP+F +P+I + + E ++C Sbjct: 65 QKVNFRTEMYKLREERDINGKAFAALVSSMLYEARFGPWFVEPVIGTIDRKTGEVYLCAT 124 Query: 466 DCIGAKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALLSSVDRDCLSGWG 287 D IGA +D+V +GT +ESL+G CE++++P +EPEELFE +QA+LS+ DRD LSG+G Sbjct: 125 DLIGAPCEPEDYVCAGTCAESLHGMCEALWRPGLEPEELFEVAAQAMLSACDRDSLSGYG 184 Query: 286 GYVLIVTATEVQERVLKGRMD 224 IVT ++ R++KGR D Sbjct: 185 AVAAIVTKDKLVTRLIKGRKD 205
>PSB3_CAEEL (Q23237) Proteasome subunit beta type 3 (EC 3.4.25.1) (Proteasome| subunit beta 3) Length = 204 Score = 143 bits (361), Expect = 4e-34 Identities = 60/140 (42%), Positives = 95/140 (67%) Frame = -1 Query: 643 QRLVFKHKLYQLREERDMKPETFASLVSSMLYEKRFGPYFCQPIIAGLGQDDEPFICTMD 464 ++++F+ LY+LRE R++KP+ + ++S++ Y+ RFG YF +P++AGL ++P+IC MD Sbjct: 65 EKIMFRKNLYELRENRNIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDDTNKPYICCMD 124 Query: 463 CIGAKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALLSSVDRDCLSGWGG 284 IG +DFV GT E L G CE+ ++ NM+P+ELFE +Q++LS ++RD SGWG Sbjct: 125 TIGCVSAPRDFVAVGTGQEYLLGVCENFWRENMKPDELFEATAQSILSCLERDAASGWGA 184 Query: 283 YVLIVTATEVQERVLKGRMD 224 V +T +V +K RMD Sbjct: 185 VVYTITKDKVNVSTIKARMD 204
>PSB3_GIALA (Q9N9W8) Proteasome subunit beta type 3 (EC 3.4.25.1)| Length = 207 Score = 119 bits (297), Expect = 1e-26 Identities = 52/126 (41%), Positives = 83/126 (65%) Frame = -1 Query: 646 YQRLVFKHKLYQLREERDMKPETFASLVSSMLYEKRFGPYFCQPIIAGLGQDDEPFICTM 467 Y+++ K LY L+E+R+++P A ++SS LY+ RFGPYF PIIAG D +P++ M Sbjct: 66 YRQIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPIIAGFEADGKPYLGAM 125 Query: 466 DCIGAKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALLSSVDRDCLSGWG 287 D IG + +F ++GTAS+ L G CE+ KP+M +E+ + Q + S+ +RD SGWG Sbjct: 126 DTIGCLDDCTNFQIAGTASDFLLGLCETHVKPDMSEDEILPLMEQIIRSATNRDAYSGWG 185 Query: 286 GYVLIV 269 +V+++ Sbjct: 186 AHVVVL 191
>PSB3_BOVIN (P33672) Proteasome subunit beta type 3 (EC 3.4.25.1) (Proteasome| theta chain) (Proteasome chain 13) (Proteasome component C10-II) (Fragment) Length = 192 Score = 92.4 bits (228), Expect = 1e-18 Identities = 54/141 (38%), Positives = 70/141 (49%), Gaps = 1/141 (0%) Frame = -1 Query: 643 QRLVFKHKLYQLREERDMKPETFASLVSSMLYEKRFGPYFCQPIIAGLGQDDEPF-ICTM 467 QRL F+ LY+L+E +V+++LYEKRFGPY+ +P+IAGL IC++ Sbjct: 52 QRLKFRLNLYELKEGXXXXXXXXXCMVANLLYEKRFGPYYTEPVIAGLDPXXXXXXICSL 111 Query: 466 DCIGAKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALLSSVDRDCLSGWG 287 D IG + DFVVSGT PE LFETISQA G Sbjct: 112 DLIGCPMVTDDFVVSGTXXXXXXXXXXXXXXXXXXPEXLFETISQAXXXXXXXXXXXXMG 171 Query: 286 GYVLIVTATEVQERVLKGRMD 224 V I+ ++ R LK RMD Sbjct: 172 VIVHIIEKDKITTRTLKARMD 192
>PSMB_METJA (Q58634) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 224 Score = 68.2 bits (165), Expect = 2e-11 Identities = 40/129 (31%), Positives = 69/129 (53%) Frame = -1 Query: 637 LVFKHKLYQLREERDMKPETFASLVSSMLYEKRFGPYFCQPIIAGLGQDDEPFICTMDCI 458 L+ + KLY++R R++ P A+L+S++L+ R P+ Q II G + + ++D + Sbjct: 65 LIAEAKLYKMRTGRNIPPLACATLLSNILHSSRMFPFLTQIIIGGYDLLEGAKLFSLDPL 124 Query: 457 GAKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALLSSVDRDCLSGWGGYV 278 G K F +G+ S YG E+ Y +M EE + AL S+++RD SG G + Sbjct: 125 GGMNEEKTFTATGSGSPIAYGVLEAGYDRDMSVEEGIKLALNALKSAMERDTFSGNGISL 184 Query: 277 LIVTATEVQ 251 ++T V+ Sbjct: 185 AVITKDGVK 193
>PSMB_ARCFU (Q9P996) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 213 Score = 66.6 bits (161), Expect = 6e-11 Identities = 40/121 (33%), Positives = 64/121 (52%) Frame = -1 Query: 619 LYQLREERDMKPETFASLVSSMLYEKRFGPYFCQPIIAGLGQDDEPFICTMDCIGAKELA 440 LY++R ER A+L S++L R+ PY Q +I G+ + + I ++D IG Sbjct: 76 LYEIRRERKPTVRAIATLTSNLLNSYRYFPYLVQLLIGGIDSEGKS-IYSIDPIGGAIEE 134 Query: 439 KDFVVSGTASESLYGACESMYKPNMEPEELFETISQALLSSVDRDCLSGWGGYVLIVTAT 260 KD V +G+ S + YG E + P + +E E +A+ S++ RD SG G V+ +T Sbjct: 135 KDIVATGSGSLTAYGVLEDRFTPEIGVDEAVELAVRAIYSAMKRDSASGDGIDVVKITED 194 Query: 259 E 257 E Sbjct: 195 E 195
>PSMB_METTH (O27270) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 210 Score = 58.5 bits (140), Expect = 2e-08 Identities = 35/121 (28%), Positives = 64/121 (52%) Frame = -1 Query: 619 LYQLREERDMKPETFASLVSSMLYEKRFGPYFCQPIIAGLGQDDEPFICTMDCIGAKELA 440 LY++R + E A+L +++L+ RF P+ Q ++ G+ ++ I ++D G + Sbjct: 74 LYRMRNSEKISIEAAAALAANILHSSRFYPFIVQTLLGGVDENGAK-IYSLDPSGGM-IP 131 Query: 439 KDFVVSGTASESLYGACESMYKPNMEPEELFETISQALLSSVDRDCLSGWGGYVLIVTAT 260 FV +G+ S YG E Y + +E + +A+ S+++RD SG G +L+ T T Sbjct: 132 DKFVSTGSGSPVAYGVLEDRYSDELYVDEAVDVAIRAIKSAMERDTYSGNG--ILVATVT 189 Query: 259 E 257 E Sbjct: 190 E 190
>PSMB_THEAC (P28061) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 211 Score = 57.8 bits (138), Expect = 3e-08 Identities = 34/119 (28%), Positives = 64/119 (53%) Frame = -1 Query: 622 KLYQLREERDMKPETFASLVSSMLYEKRFGPYFCQPIIAGLGQDDEPFICTMDCIGAKEL 443 +LY+L+ +M E A+L+S+ML + ++ PY Q ++ G+ D P + ++D G + Sbjct: 72 ELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGI--DTAPHVFSIDAAGG-SV 128 Query: 442 AKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALLSSVDRDCLSGWGGYVLIVT 266 + +G+ S +YG ES Y M +E + + +A+ ++ RD SG V ++T Sbjct: 129 EDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSASGGMIDVAVIT 187
>PSMB_PYRAB (Q9V0N9) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 207 Score = 55.8 bits (133), Expect = 1e-07 Identities = 37/128 (28%), Positives = 68/128 (53%) Frame = -1 Query: 622 KLYQLREERDMKPETFASLVSSMLYEKRFGPYFCQPIIAGLGQDDEPFICTMDCIGAKEL 443 KLY + + M + A+L+++ML R PY ++ G D++P + ++D +G Sbjct: 74 KLYYAQSGKRMSVKALATLLANMLNGARMLPYLAWFLVGGF--DEKPRLYSVDMMGGITE 131 Query: 442 AKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALLSSVDRDCLSGWGGYVLIVTA 263 K +V +G+ E Y +S Y+ +++ E + +A+ S++ RD SG G +++VT Sbjct: 132 DK-YVAAGSGMEFAYSVLDSEYREDLKVREGIKIAVEAINSAIKRDVFSGDG--IMVVTI 188 Query: 262 TEVQERVL 239 TE R L Sbjct: 189 TEEGYREL 196
>PSMB_PYRHO (O50110) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 207 Score = 53.1 bits (126), Expect = 7e-07 Identities = 33/122 (27%), Positives = 66/122 (54%) Frame = -1 Query: 622 KLYQLREERDMKPETFASLVSSMLYEKRFGPYFCQPIIAGLGQDDEPFICTMDCIGAKEL 443 KLY + + M + A+L+++++ ++ PY ++ G D++P + ++D +G Sbjct: 74 KLYYSQSGKRMSVKALATLLANIMNGAKYFPYLAWFLVG--GYDEKPKLYSVDMVGGITE 131 Query: 442 AKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALLSSVDRDCLSGWGGYVLIVTA 263 K + +G+ E Y +S YK N+ EE + +A+ +++ RD SG G +L+VT Sbjct: 132 DK-YATAGSGMEFAYSILDSEYKDNLTLEEGIKLAVKAINTAIKRDVFSGDG--ILVVTI 188 Query: 262 TE 257 T+ Sbjct: 189 TK 190
>PSB12_CARAU (Q9IB83) Proteasome subunit beta type 1-B (EC 3.4.25.1) (20S| proteasome beta 6 subunit B) (B6-B) Length = 237 Score = 53.1 bits (126), Expect = 7e-07 Identities = 32/142 (22%), Positives = 69/142 (48%), Gaps = 9/142 (6%) Frame = -1 Query: 622 KLYQLREERDMKPETFASLVSSMLYEKRFGPYFCQPIIAGLGQDDEPFICTMDCIGAKEL 443 K+Y+ + M A+++S++LY +RF PY+ II GL ++ + + D +G+ + Sbjct: 97 KMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGRGAVYSFDPVGSYQ- 155 Query: 442 AKDFVVSGTASESL---------YGACESMYKPNMEPEELFETISQALLSSVDRDCLSGW 290 + G+AS L + E++ + + E+ + + +S+ +RD +G Sbjct: 156 RDTYKAGGSASAMLQPLLDNQIGFKNMENVEQVPLSQEKAVQLVKDVFISAAERDVYTGD 215 Query: 289 GGYVLIVTATEVQERVLKGRMD 224 + I+T ++E ++ R D Sbjct: 216 ALKICIITKEGIREEIVPLRKD 237
>PSB11_CARAU (Q9IB84) Proteasome subunit beta type 1-A (EC 3.4.25.1) (20S| proteasome beta 6 subunit A) (B6-A) Length = 238 Score = 53.1 bits (126), Expect = 7e-07 Identities = 32/142 (22%), Positives = 69/142 (48%), Gaps = 9/142 (6%) Frame = -1 Query: 622 KLYQLREERDMKPETFASLVSSMLYEKRFGPYFCQPIIAGLGQDDEPFICTMDCIGAKEL 443 K+Y+ + M A+++S++LY +RF PY+ II GL ++ + + D +G+ + Sbjct: 98 KMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGRGAVYSFDPVGSYQ- 156 Query: 442 AKDFVVSGTASESL---------YGACESMYKPNMEPEELFETISQALLSSVDRDCLSGW 290 + G+AS L + E++ + + E+ + + +S+ +RD +G Sbjct: 157 RDTYKAGGSASAMLQPLLDNQIGFKNMENVEQVPLSQEKAVQLVKDVFISAAERDVYTGD 216 Query: 289 GGYVLIVTATEVQERVLKGRMD 224 + I+T ++E ++ R D Sbjct: 217 ALKICIITKEGIREEIVPLRKD 238
>PSB9_MUSMB (O35522) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)| (Proteasome chain 7) (Macropain chain 7) (Multicatalytic endopeptidase complex chain 7) (RING12 protein) (Low molecular mass protein 2) Length = 219 Score = 52.8 bits (125), Expect = 9e-07 Identities = 34/114 (29%), Positives = 59/114 (51%) Frame = -1 Query: 574 ASLVSSMLYEKRFGPYFCQPIIAGLGQDDEPFICTMDCIGAKELAKDFVVSGTASESLYG 395 A++V ++ Y+ R I+AG Q + + +G + + F +SG+ S +YG Sbjct: 100 ANVVKNISYKYR-EDLLAHLIVAGWDQREGGQV--YGTMGGMLIRQPFTISGSGSSYIYG 156 Query: 394 ACESMYKPNMEPEELFETISQALLSSVDRDCLSGWGGYVLIVTATEVQERVLKG 233 ++ YKP M PEE + A+ +++RD SG Y++ +TA V RV+ G Sbjct: 157 YVDAAYKPGMTPEECRRFTTNAITLAMNRDGSSGGVIYLVTITAAGVDHRVILG 210
>PSB1_MOUSE (O09061) Proteasome subunit beta type 1 (EC 3.4.25.1) (Proteasome| component C5) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome gamma chain) Length = 240 Score = 51.6 bits (122), Expect = 2e-06 Identities = 36/142 (25%), Positives = 70/142 (49%), Gaps = 9/142 (6%) Frame = -1 Query: 622 KLYQLREERDMKPETFASLVSSMLYEKRFGPYFCQPIIAGLGQDDEPFICTMDCIGAKEL 443 K+Y+ + M A+++S++LY +RF PY+ II GL ++ + + + D +G+ + Sbjct: 100 KMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQ- 158 Query: 442 AKDFVVSGTASESLYGACESM--YKPNMEPEELFETISQAL-------LSSVDRDCLSGW 290 F G+AS L ++ +K E + T+ +A+ +S+ +RD +G Sbjct: 159 RDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLTLDRAMRLVKDVFISAAERDVYTGD 218 Query: 289 GGYVLIVTATEVQERVLKGRMD 224 + IVT ++E + R D Sbjct: 219 ALRICIVTKEGIREETVPLRKD 240
>PSB9_MUSSI (O35524) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)| (Proteasome chain 7) (Macropain chain 7) (Multicatalytic endopeptidase complex chain 7) (RING12 protein) (Low molecular mass protein 2) Length = 219 Score = 51.2 bits (121), Expect = 3e-06 Identities = 33/114 (28%), Positives = 58/114 (50%) Frame = -1 Query: 574 ASLVSSMLYEKRFGPYFCQPIIAGLGQDDEPFICTMDCIGAKELAKDFVVSGTASESLYG 395 A++V ++ Y+ R I+AG Q + + +G + + F + G+ S +YG Sbjct: 100 ANVVKNISYKYR-EDLLAHLIVAGWDQREGGQV--YGTMGGMLIRQPFTIGGSGSSYIYG 156 Query: 394 ACESMYKPNMEPEELFETISQALLSSVDRDCLSGWGGYVLIVTATEVQERVLKG 233 ++ YKP M PEE + A+ +++RD SG Y++ +TA V RV+ G Sbjct: 157 YVDAAYKPGMTPEECRRFTTNAITLAMNRDGSSGGVIYLVTITAAGVDHRVILG 210
>PSB9_MUSDU (O35521) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)| (Proteasome chain 7) (Macropain chain 7) (Multicatalytic endopeptidase complex chain 7) (RING12 protein) (Low molecular mass protein 2) Length = 219 Score = 51.2 bits (121), Expect = 3e-06 Identities = 33/114 (28%), Positives = 58/114 (50%) Frame = -1 Query: 574 ASLVSSMLYEKRFGPYFCQPIIAGLGQDDEPFICTMDCIGAKELAKDFVVSGTASESLYG 395 A++V ++ Y+ R I+AG Q + + +G + + F + G+ S +YG Sbjct: 100 ANVVKNISYKYR-EDLLAHLIVAGWDQREGGQV--YGTMGGMLIRQPFTIGGSGSSYIYG 156 Query: 394 ACESMYKPNMEPEELFETISQALLSSVDRDCLSGWGGYVLIVTATEVQERVLKG 233 ++ YKP M PEE + A+ +++RD SG Y++ +TA V RV+ G Sbjct: 157 YVDAAYKPGMTPEECRRFTTNAITLAMNRDGSSGGVIYLVTITAAGVDHRVILG 210
>PSB9_MOUSE (P28076) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)| (Proteasome chain 7) (Macropain chain 7) (Multicatalytic endopeptidase complex chain 7) (RING12 protein) (Low molecular mass protein 2) (LMP-2d) Length = 219 Score = 51.2 bits (121), Expect = 3e-06 Identities = 33/114 (28%), Positives = 58/114 (50%) Frame = -1 Query: 574 ASLVSSMLYEKRFGPYFCQPIIAGLGQDDEPFICTMDCIGAKELAKDFVVSGTASESLYG 395 A++V ++ Y+ R I+AG Q + + +G + + F + G+ S +YG Sbjct: 100 ANVVKNISYKYR-EDLLAHLIVAGWDQREGGQV--YGTMGGMLIRQPFTIGGSGSSYIYG 156 Query: 394 ACESMYKPNMEPEELFETISQALLSSVDRDCLSGWGGYVLIVTATEVQERVLKG 233 ++ YKP M PEE + A+ +++RD SG Y++ +TA V RV+ G Sbjct: 157 YVDAAYKPGMTPEECRRFTTNAITLAMNRDGSSGGVIYLVTITAAGVDHRVILG 210
>PSB1_RAT (P18421) Proteasome subunit beta type 1 (EC 3.4.25.1) (Proteasome| component C5) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome gamma chain) Length = 240 Score = 51.2 bits (121), Expect = 3e-06 Identities = 36/142 (25%), Positives = 70/142 (49%), Gaps = 9/142 (6%) Frame = -1 Query: 622 KLYQLREERDMKPETFASLVSSMLYEKRFGPYFCQPIIAGLGQDDEPFICTMDCIGAKEL 443 K+Y+ + M A+++S++LY +RF PY+ II GL ++ + + + D +G+ + Sbjct: 100 KMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIEGLDEEGKGAVYSFDPVGSYQ- 158 Query: 442 AKDFVVSGTASESLYGACESM--YKPNMEPEELFETISQAL-------LSSVDRDCLSGW 290 F G+AS L ++ +K E + T+ +A+ +S+ +RD +G Sbjct: 159 RDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLTLDRAMRLVKDVFISAAERDVYTGD 218 Query: 289 GGYVLIVTATEVQERVLKGRMD 224 + IVT ++E + R D Sbjct: 219 ALRICIVTKEGIREETVPLRKD 240
>PSB1_HUMAN (P20618) Proteasome subunit beta type 1 (EC 3.4.25.1) (Proteasome| component C5) (Macropain subunit C5) (Multicatalytic endopeptidase complex subunit C5) (Proteasome gamma chain) Length = 241 Score = 50.4 bits (119), Expect = 4e-06 Identities = 35/142 (24%), Positives = 66/142 (46%), Gaps = 9/142 (6%) Frame = -1 Query: 622 KLYQLREERDMKPETFASLVSSMLYEKRFGPYFCQPIIAGLGQDDEPFICTMDCIGAKEL 443 K+Y+ + M A+++S++LY +RF PY+ II GL ++ + + + D +G+ + Sbjct: 101 KMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQ- 159 Query: 442 AKDFVVSGTASESLYGACESMYK-PNMEPEE--------LFETISQALLSSVDRDCLSGW 290 F G+AS L ++ NM+ E + +S+ +RD +G Sbjct: 160 RDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVFISAAERDVYTGD 219 Query: 289 GGYVLIVTATEVQERVLKGRMD 224 + IVT ++E + R D Sbjct: 220 ALRICIVTKEGIREETVSLRKD 241
>PSB9_RAT (P28077) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)| (Proteasome chain 7) (Macropain chain 7) (Multicatalytic endopeptidase complex chain 7) (RING12 protein) (Low molecular mass protein 2) Length = 219 Score = 50.1 bits (118), Expect = 6e-06 Identities = 25/76 (32%), Positives = 42/76 (55%) Frame = -1 Query: 460 IGAKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALLSSVDRDCLSGWGGY 281 +G + + F + G+ S +YG ++ YKP M PEE + A+ +++RD SG Y Sbjct: 135 MGGMLIRQPFAIGGSGSTYIYGYVDAAYKPGMTPEECRRFTTDAITLAMNRDGSSGGVIY 194 Query: 280 VLIVTATEVQERVLKG 233 ++ +TA V RV+ G Sbjct: 195 LVTITADGVDHRVILG 210
>PSB9_HUMAN (P28065) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)| (Proteasome chain 7) (Macropain chain 7) (Multicatalytic endopeptidase complex chain 7) (RING12 protein) (Low molecular mass protein 2) Length = 219 Score = 49.7 bits (117), Expect = 8e-06 Identities = 25/76 (32%), Positives = 40/76 (52%) Frame = -1 Query: 460 IGAKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALLSSVDRDCLSGWGGY 281 +G + F + G+ S +YG ++ YKP M PEE + A+ ++ RD SG Y Sbjct: 135 LGGMLTRQPFAIGGSGSTFIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRDGSSGGVIY 194 Query: 280 VLIVTATEVQERVLKG 233 ++ +TA V RV+ G Sbjct: 195 LVTITAAGVDHRVILG 210
>PSB1_ARATH (P42742) Proteasome subunit beta type 1 (EC 3.4.25.1) (Proteasome| subunit beta type 6) (20S proteasome beta subunit F-1) (TAS-G39.20) (TAS-F22/FAFP98) (Proteasome component C5) Length = 223 Score = 49.7 bits (117), Expect = 8e-06 Identities = 36/155 (23%), Positives = 71/155 (45%), Gaps = 13/155 (8%) Frame = -1 Query: 649 LYQRLVFKHKLYQLREERDMKPETFASLVSSMLYEKRFGPYFCQPIIAGLGQDDEPFICT 470 L + L +H +YQ + + M A L+S+ LY KRF PY+ ++ GL ++ + + T Sbjct: 70 LQKVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDEEGKGCVFT 129 Query: 469 MDCIGAKELAKDFVVSGTASESLYGACESMYK---PNMEPE----------ELFETISQA 329 D +G+ E + G+ S + ++ K P + P+ E + + Sbjct: 130 YDAVGSYERV-GYGAQGSGSTLIMPFLDNQLKSPSPLLLPKQDSNTPLSEAEAVDLVKTV 188 Query: 328 LLSSVDRDCLSGWGGYVLIVTATEVQERVLKGRMD 224 S+ +RD +G ++I+ A ++ ++ R D Sbjct: 189 FASATERDIYTGDKLEIMILKADGIKTELMDLRKD 223
>PSB1_DROME (P40304) Proteasome subunit beta type 1 (EC 3.4.25.1) (Proteasome| 26 kDa subunit) Length = 235 Score = 49.3 bits (116), Expect = 1e-05 Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 11/142 (7%) Frame = -1 Query: 616 YQLREERDMKPETFASLVSSMLYEKRFGPYFCQPIIAGLGQDDEPFICTMDCIGAKELAK 437 Y+ R M E A ++S +Y +RF PY+ I+AG+ + + + + D IG E A Sbjct: 95 YEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGIDNEGKGVVYSYDPIGHCEKA- 153 Query: 436 DFVVSGTASESLYGACESMY-----------KPNMEPEELFETISQALLSSVDRDCLSGW 290 + GTA L ++ K + E S +S+ +RD +G Sbjct: 154 TYRAGGTAGTLLQPVLDNQIGHKNMNLEDADKIKLTKERAVSVASDTFISAAERDIYTGD 213 Query: 289 GGYVLIVTATEVQERVLKGRMD 224 + I+T ++ R L R D Sbjct: 214 SVLINIITKDGIEVRTLTLRQD 235
>PSB1_ORYSA (O64464) Proteasome subunit beta type 1 (EC 3.4.25.1) (20S| proteasome alpha subunit F) (20S proteasome subunit beta-6) Length = 221 Score = 48.9 bits (115), Expect = 1e-05 Identities = 35/155 (22%), Positives = 66/155 (42%), Gaps = 13/155 (8%) Frame = -1 Query: 649 LYQRLVFKHKLYQLREERDMKPETFASLVSSMLYEKRFGPYFCQPIIAGLGQDDEPFICT 470 L++ L + LYQ + + M A L+S+ LY KRF PY+ ++ GL + + + T Sbjct: 68 LHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFT 127 Query: 469 MDCIGAKELAKDFVVSGTASESLYGACESMYK---PNMEP----------EELFETISQA 329 D +G+ E + GT S + ++ K P + P E + + Sbjct: 128 YDAVGSYE-RTGYSAQGTGSALIMPVLDNQLKSPSPLLLPARDAVTPLSETEAVDLVKDV 186 Query: 328 LLSSVDRDCLSGWGGYVLIVTATEVQERVLKGRMD 224 S+ +RD +G ++++ + + R D Sbjct: 187 FASATERDIYTGDKLEIVVINKAGTKREYIDLRKD 221
>PSB1_PETHY (O82531) Proteasome subunit beta type 1 (EC 3.4.25.1) (20S| proteasome alpha subunit F) (20S proteasome subunit beta-6) Length = 223 Score = 48.1 bits (113), Expect = 2e-05 Identities = 35/155 (22%), Positives = 69/155 (44%), Gaps = 13/155 (8%) Frame = -1 Query: 649 LYQRLVFKHKLYQLREERDMKPETFASLVSSMLYEKRFGPYFCQPIIAGLGQDDEPFICT 470 L + L +H +YQ + + M L+S+ LY KRF PY+ ++ GL + + + T Sbjct: 70 LQKVLASRHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDSEGKGCVFT 129 Query: 469 MDCIGAKELAKDFVVSGTASESLYGACESMYK---PNMEP----------EELFETISQA 329 D +G+ E + G+ S + ++ K P + P E + + Sbjct: 130 YDAVGSYERV-GYSSQGSGSTLIMPFLDNQLKSPSPLLLPAQDAVTPLSEAEAIDLVKTC 188 Query: 328 LLSSVDRDCLSGWGGYVLIVTATEVQERVLKGRMD 224 S+ +RD +G ++I+ A+ ++ ++ R D Sbjct: 189 FASATERDIYTGDRLEIVILNASGIRREEMELRKD 223
>PSB8_CANFA (Q5W416) Proteasome subunit beta type 8 precursor (EC 3.4.25.1)| (Proteasome component C13) (Macropain subunit C13) (Multicatalytic endopeptidase complex subunit C13) Length = 276 Score = 47.4 bits (111), Expect = 4e-05 Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 1/119 (0%) Frame = -1 Query: 646 YQRLVFKH-KLYQLREERDMKPETFASLVSSMLYEKRFGPYFCQPIIAGLGQDDEPFICT 470 ++RL+ K +LY LR + + L+S+M+Y+ R +I G + P + Sbjct: 127 WERLLAKECRLYYLRNGERISVSAASKLLSNMVYQYRGMDLSMGSMICGWDKKG-PGLYY 185 Query: 469 MDCIGAKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALLSSVDRDCLSG 293 +D G + L+ + +G+ S YG +S Y+P++ PEE +E +A+ + RD SG Sbjct: 186 VDQNGTR-LSGNMFSTGSGSTYAYGVMDSGYQPSLSPEEAYELGRRAITYATHRDSYSG 243
>PSB9_MUSPL (O35523) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)| (Proteasome chain 7) (Macropain chain 7) (Multicatalytic endopeptidase complex chain 7) (RING12 protein) (Low molecular mass protein 2) Length = 219 Score = 46.6 bits (109), Expect = 6e-05 Identities = 31/114 (27%), Positives = 56/114 (49%) Frame = -1 Query: 574 ASLVSSMLYEKRFGPYFCQPIIAGLGQDDEPFICTMDCIGAKELAKDFVVSGTASESLYG 395 A++V ++ Y+ R I+AG Q + + +G + + F + G+ S +YG Sbjct: 100 ANVVKNISYKYR-EDLLAHLIVAGWDQREGGQV--YGTMGGMLIRQPFTIGGSGSSYIYG 156 Query: 394 ACESMYKPNMEPEELFETISQALLSSVDRDCLSGWGGYVLIVTATEVQERVLKG 233 ++ YKP M EE + A+ +++RD SG Y++ +T V RV+ G Sbjct: 157 YVDAAYKPGMTSEECRRFTTNAITLAMNRDGSSGGVIYLVTITVAGVDHRVILG 210
>PSB1_SCHPO (Q9UQY2) Probable proteasome subunit beta type 1 (EC 3.4.25.1)| Length = 225 Score = 46.2 bits (108), Expect = 8e-05 Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 16/158 (10%) Frame = -1 Query: 649 LYQRLVFKHKLYQLREERDMKPETFASLVSSMLYEKRFGPYFCQPIIAGLGQDDEPFICT 470 L +R+ + LY ER M ++ A +V ++LY KRF PY+ +AG+ ++ + I + Sbjct: 68 LVKRIQQRIDLYHDNHERKMSAQSCACMVRTLLYGKRFFPYYVYTTVAGIDKEGKGEIYS 127 Query: 469 MDCIGAKE--------LAKDFVVS------GTASESLYGACESMYKPN--MEPEELFETI 338 D +G+ E A +F+ ++ + G+ KP ++ EE + Sbjct: 128 FDPVGSYEREWCRAGGSAANFITPFLDNQVNLHNQYVPGSHGKERKPRRLLKLEEAMKIT 187 Query: 337 SQALLSSVDRDCLSGWGGYVLIVTATEVQERVLKGRMD 224 + A S+ +R G V I+T V+ R++ + D Sbjct: 188 TDAFTSAGERHIEVGDSVLVKIITKEGVETRIIPLKKD 225
>PSMB_PYRFU (Q8U125) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 206 Score = 44.7 bits (104), Expect = 2e-04 Identities = 31/132 (23%), Positives = 69/132 (52%), Gaps = 1/132 (0%) Frame = -1 Query: 649 LYQRLVFKHKLYQLREERDMKPETFASLVSSMLYEKRFGPYFCQPIIAGLGQDDEPFICT 470 L + L + LY+ ++M + A+L++++L ++ PY ++ G D++P + + Sbjct: 65 LVRLLKAEANLYKSTVGKEMSVKALATLLANILNGSKYFPYLGWFLVG--GYDEKPRLFS 122 Query: 469 MDCIGAKELAKD-FVVSGTASESLYGACESMYKPNMEPEELFETISQALLSSVDRDCLSG 293 +D +G + +D + +G+ E Y +S Y+ M + + +A+ ++ RD +G Sbjct: 123 VDMVGG--ITEDNYAAAGSGMEFAYSILDSEYREEMSVNDGIKLAVKAINVAIKRDVFTG 180 Query: 292 WGGYVLIVTATE 257 G +L+VT T+ Sbjct: 181 DG--LLVVTITK 190
>PSB8_HUMAN (P28062) Proteasome subunit beta type 8 precursor (EC 3.4.25.1)| (Proteasome component C13) (Macropain subunit C13) (Multicatalytic endopeptidase complex subunit C13) Length = 276 Score = 43.9 bits (102), Expect = 4e-04 Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 10/128 (7%) Frame = -1 Query: 646 YQRLVFKH-KLYQLREERDMKPETFASLVSSMLYEKRFGPYFCQPIIAGLGQDDEPFICT 470 ++RL+ K +LY LR + + L+S+M+ + R G+G IC Sbjct: 127 WERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYR-----------GMGLSMGSMICG 175 Query: 469 MDCIG---------AKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALLSS 317 D G L+ + +G+ + YG +S Y+PN+ PEE ++ +A+ + Sbjct: 176 WDKKGPGLYYVDEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIAYA 235 Query: 316 VDRDCLSG 293 RD SG Sbjct: 236 THRDSYSG 243
>PSB6_SCHPO (O43063) Probable proteasome subunit beta type 6 precursor (EC| 3.4.25.1) Length = 226 Score = 43.5 bits (101), Expect = 5e-04 Identities = 30/125 (24%), Positives = 60/125 (48%) Frame = -1 Query: 619 LYQLREERDMKPETFASLVSSMLYEKRFGPYFCQPIIAGLGQDDEPFICTMDCIGAKELA 440 +Y+++ D T A+L S M Y+ + I+AG + + ++ +G Sbjct: 89 MYRIQFGHDPSVHTAATLASEMCYQNK-NMLSAGLIVAGYDEKTGGDVYSIP-LGGSLHK 146 Query: 439 KDFVVSGTASESLYGACESMYKPNMEPEELFETISQALLSSVDRDCLSGWGGYVLIVTAT 260 + + G+ S +YG C++ ++ NM EE E + A+ +++RD SG G +++ Sbjct: 147 QPLAIGGSGSAFIYGFCDANFRENMTQEEAVEFLKNAVALAMERDGSSG-GTIRMVILNK 205 Query: 259 EVQER 245 + ER Sbjct: 206 DGMER 210
>PSB1_YEAST (P23724) Proteasome component C5 (EC 3.4.25.1) (Multicatalytic| endopeptidase complex subunit C5) Length = 241 Score = 43.5 bits (101), Expect = 5e-04 Identities = 35/144 (24%), Positives = 67/144 (46%), Gaps = 18/144 (12%) Frame = -1 Query: 601 ERDMKPETFASLVSSMLYEKRFGPYFCQPIIAGLGQDDEPFICTMDCIGAKELAKDFVVS 422 ++ + + A + +LY KRF PY+ IIAGL +D + + + D +G+ E ++ + Sbjct: 100 DKKLSINSAARNIQHLLYGKRFFPYYVHTIIAGLDEDGKGAVYSFDPVGSYE--REQCRA 157 Query: 421 GTASESLYGA-------CESMYKPN-----------MEPEELFETISQALLSSVDRDCLS 296 G A+ SL ++ Y+P + EE+ + + + S+ +R Sbjct: 158 GGAAASLIMPFLDNQVNFKNQYEPGTNGKVKKPLKYLSVEEVIKLVRDSFTSATERHIQV 217 Query: 295 GWGGYVLIVTATEVQERVLKGRMD 224 G G +LIVT V++ + + D Sbjct: 218 GDGLEILIVTKDGVRKEFYELKRD 241
>PSB6_HUMAN (P28072) Proteasome subunit beta type 6 precursor (EC 3.4.25.1)| (Proteasome delta chain) (Macropain delta chain) (Multicatalytic endopeptidase complex delta chain) (Proteasome subunit Y) Length = 239 Score = 41.6 bits (96), Expect = 0.002 Identities = 31/116 (26%), Positives = 54/116 (46%) Frame = -1 Query: 580 TFASLVSSMLYEKRFGPYFCQPIIAGLGQDDEPFICTMDCIGAKELAKDFVVSGTASESL 401 T ASL M Y R IIAG + + ++ +G + + F + G+ S + Sbjct: 112 TAASLFKEMCYRYR-EDLMAGIIIAGWDPQEGGQVYSVP-MGGMMVRQSFAIGGSGSSYI 169 Query: 400 YGACESMYKPNMEPEELFETISQALLSSVDRDCLSGWGGYVLIVTATEVQERVLKG 233 YG ++ Y+ M EE + + AL +++RD SG + + + V+ +VL G Sbjct: 170 YGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAAIAESGVERQVLLG 225
>PSB9_ORYLA (Q8UW64) Proteasome subunit beta type 9 precursor (EC 3.4.25.1)| (Low molecular mass protein 2) Length = 217 Score = 41.2 bits (95), Expect = 0.003 Identities = 29/129 (22%), Positives = 60/129 (46%) Frame = -1 Query: 619 LYQLREERDMKPETFASLVSSMLYEKRFGPYFCQPIIAGLGQDDEPFICTMDCIGAKELA 440 ++ L + D + + A+LV ++ Y+ + I+AG + D + +G Sbjct: 83 VHSLEIDEDPQVRSAATLVKNISYKYK-EELSAHLIVAGWDRRDGGQVFAT--LGGLLTR 139 Query: 439 KDFVVSGTASESLYGACESMYKPNMEPEELFETISQALLSSVDRDCLSGWGGYVLIVTAT 260 + F + G+ S +YG ++ Y+ M EE + + L +++RD SG Y++ + Sbjct: 140 QPFAIGGSGSSYVYGFVDAEYRRGMTKEECQKFVVNTLALAMNRDGSSGGVAYIVTIDEH 199 Query: 259 EVQERVLKG 233 E+V+ G Sbjct: 200 STDEKVILG 208
>PSB8_RAT (P28064) Proteasome subunit beta type 8 precursor (EC 3.4.25.1)| (Proteasome component C13) (Macropain subunit C13) (Multicatalytic endopeptidase complex subunit C13) Length = 276 Score = 40.8 bits (94), Expect = 0.003 Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 1/119 (0%) Frame = -1 Query: 646 YQRLVFKH-KLYQLREERDMKPETFASLVSSMLYEKRFGPYFCQPIIAGLGQDDEPFICT 470 ++RL+ K +LY LR + + L+S+M+ + R +I G + P + Sbjct: 127 WERLLAKECRLYYLRNGERISVSAASKLLSNMMLQYRGMGLSMGSMICGWDKKG-PGLYY 185 Query: 469 MDCIGAKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALLSSVDRDCLSG 293 +D G + L+ +G+ + YG +S Y+ ++ PEE ++ +A++ + RD SG Sbjct: 186 VDDNGTR-LSGQMFSTGSGNTYAYGVMDSGYRQDLSPEEAYDLARRAIVYATHRDSYSG 243
>PSB6_RAT (P28073) Proteasome subunit beta type 6 precursor (EC 3.4.25.1)| (Proteasome delta chain) (Macropain delta chain) (Multicatalytic endopeptidase complex delta chain) (Proteasome subunit Y) (Proteasome chain 5) Length = 238 Score = 40.0 bits (92), Expect = 0.006 Identities = 30/116 (25%), Positives = 54/116 (46%) Frame = -1 Query: 580 TFASLVSSMLYEKRFGPYFCQPIIAGLGQDDEPFICTMDCIGAKELAKDFVVSGTASESL 401 T ASL M Y R IIAG + + ++ +G + + F + G+ S + Sbjct: 111 TAASLFKEMCYRYR-EDLMAGIIIAGWDPQEGGQVYSVP-MGGMMVRQSFAIGGSGSSYI 168 Query: 400 YGACESMYKPNMEPEELFETISQALLSSVDRDCLSGWGGYVLIVTATEVQERVLKG 233 YG ++ Y+ M +E + + AL +++RD SG + + + V+ +VL G Sbjct: 169 YGYVDATYREGMTKDECLQFTANALALAMERDGSSGGVIRLAAIQQSGVERQVLLG 224
>PSB6_MOUSE (Q60692) Proteasome subunit beta type 6 precursor (EC 3.4.25.1)| (Proteasome delta chain) (Macropain delta chain) (Multicatalytic endopeptidase complex delta chain) (Proteasome subunit Y) Length = 238 Score = 40.0 bits (92), Expect = 0.006 Identities = 30/116 (25%), Positives = 54/116 (46%) Frame = -1 Query: 580 TFASLVSSMLYEKRFGPYFCQPIIAGLGQDDEPFICTMDCIGAKELAKDFVVSGTASESL 401 T ASL M Y R IIAG + + ++ +G + + F + G+ S + Sbjct: 111 TAASLFKEMCYRYR-EDLMAGIIIAGWDPQEGGQVYSVP-MGGMMVRQSFAIGGSGSSYI 168 Query: 400 YGACESMYKPNMEPEELFETISQALLSSVDRDCLSGWGGYVLIVTATEVQERVLKG 233 YG ++ Y+ M +E + + AL +++RD SG + + + V+ +VL G Sbjct: 169 YGYVDATYREGMTKDECLQFTANALALAMERDGSSGGVIRLAAIQESGVERQVLLG 224
>PSB5A_ARATH (O23717) Proteasome subunit beta type 5-A precursor (EC 3.4.25.1)| (20S proteasome beta subunit E-1) (Proteasome epsilon-1 chain) (Proteasome component E) Length = 274 Score = 39.3 bits (90), Expect = 0.010 Identities = 33/118 (27%), Positives = 56/118 (47%) Frame = -1 Query: 646 YQRLVFKHKLYQLREERDMKPETFASLVSSMLYEKRFGPYFCQPIIAGLGQDDEPFICTM 467 ++ L K +L++L +R + + L+++MLY R +IAG + P + + Sbjct: 113 HRNLGIKCRLHELANKRRISVSGASKLLANMLYSYRGMGLSVGTMIAG-WDETGPGLYYV 171 Query: 466 DCIGAKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALLSSVDRDCLSG 293 D G + F V G+ S YG +S YK +M EE E +++ + RD SG Sbjct: 172 DNEGGRLKGDRFSV-GSGSPYAYGVLDSGYKYDMSVEEASELARRSIYHATFRDGASG 228
>PSB5B_ARATH (Q9LIP2) Proteasome subunit beta type 5-B precursor (EC 3.4.25.1)| (20S proteasome beta subunit E-2) (Proteasome epsilon-2 chain) Length = 273 Score = 38.9 bits (89), Expect = 0.013 Identities = 33/118 (27%), Positives = 56/118 (47%) Frame = -1 Query: 646 YQRLVFKHKLYQLREERDMKPETFASLVSSMLYEKRFGPYFCQPIIAGLGQDDEPFICTM 467 ++ L K +L++L +R + + L+++MLY R +IAG + P + + Sbjct: 113 HRNLGIKCRLHELANKRRISVSGASKLLANMLYSYRGMGLSVGTMIAG-WDETGPGLYYV 171 Query: 466 DCIGAKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALLSSVDRDCLSG 293 D G + F V G+ S YG +S YK +M EE E +++ + RD SG Sbjct: 172 DNEGGRLKGDRFSV-GSGSPYAYGVLDSGYKFDMSVEEASELARRSIYHATFRDGASG 228
>PSB5_CHICK (P34065) Proteasome subunit beta type 5 precursor (EC 3.4.25.1)| (Proteasome chain 1) (Macropain chain 1) (Multicatalytic endopeptidase complex chain 1) (Proteasome subunit C1) (Fragment) Length = 256 Score = 38.9 bits (89), Expect = 0.013 Identities = 28/119 (23%), Positives = 58/119 (48%), Gaps = 1/119 (0%) Frame = -1 Query: 646 YQRLVFKH-KLYQLREERDMKPETFASLVSSMLYEKRFGPYFCQPIIAGLGQDDEPFICT 470 ++RL+ + ++Y+LR + + + L+++M+Y+ + +I G + P + Sbjct: 110 WERLLARQCRVYELRNKEPISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRG-PGLYY 168 Query: 469 MDCIGAKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALLSSVDRDCLSG 293 +D G + + F V G+ S YG + +P+M +E E +A+ + RD SG Sbjct: 169 VDSEGTRIPGEAFAV-GSGSSYAYGVLDGGRRPDMATDEALELARRAIFQAARRDAYSG 226
>PSB1_TRYBB (Q9U794) Proteasome subunit beta type 1 (EC 3.4.25.1) (20S| proteasome beta 6 subunit) Length = 258 Score = 38.9 bits (89), Expect = 0.013 Identities = 35/152 (23%), Positives = 65/152 (42%), Gaps = 10/152 (6%) Frame = -1 Query: 649 LYQRLVFKHKLYQLREERDM-KPETFASLVSSMLYEKRFGPYFCQPIIAGLGQDDEPFIC 473 L Q L ++ + YQ + + A L S+MLY++RF PY+ +I G+ + Sbjct: 108 LQQMLKYRIQWYQYNNGGKVPSTKAIAKLTSTMLYQRRFFPYYTFNMIVGIDEKGAGVCY 167 Query: 472 TMDCIGAKELAKDFVVSGTASESLYGACESMY---------KPNMEPEELFETISQALLS 320 + D +G+ E + + G+AS + + + ++ EE + A Sbjct: 168 SYDPVGSTEPFR-YGTCGSASSFVEPLLDCLLTRQHMVTQAPADLTMEEALGMLKNAFTG 226 Query: 319 SVDRDCLSGWGGYVLIVTATEVQERVLKGRMD 224 + +RD +G I+TA V + + R D Sbjct: 227 AAERDIFTGDTVCFHIITADGVGTEMFELRKD 258
>PSB8_MOUSE (P28063) Proteasome subunit beta type 8 precursor (EC 3.4.25.1)| (Proteasome component C13) (Macropain subunit C13) (Multicatalytic endopeptidase complex subunit C13) Length = 276 Score = 38.1 bits (87), Expect = 0.023 Identities = 30/119 (25%), Positives = 58/119 (48%), Gaps = 1/119 (0%) Frame = -1 Query: 646 YQRLVFKH-KLYQLREERDMKPETFASLVSSMLYEKRFGPYFCQPIIAGLGQDDEPFICT 470 ++RL+ K +LY LR + + L+S+M+ + R +I G + P + Sbjct: 127 WERLLAKECRLYYLRNGERISVSAASKLLSNMMLQYRGMGLSMGSMICGWDKKG-PGLYY 185 Query: 469 MDCIGAKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALLSSVDRDCLSG 293 +D G + L+ +G+ + YG +S Y+ ++ PEE ++ +A+ + RD SG Sbjct: 186 VDDNGTR-LSGQMFSTGSGNTYAYGVMDSGYRQDLSPEEAYDLGRRAIAYATHRDNYSG 243
>PSB1_CAEEL (P34286) Proteasome subunit beta type 1 (EC 3.4.25.1) (Proteasome| subunit beta 6) Length = 258 Score = 37.7 bits (86), Expect = 0.030 Identities = 29/98 (29%), Positives = 45/98 (45%) Frame = -1 Query: 625 HKLYQLREERDMKPETFASLVSSMLYEKRFGPYFCQPIIAGLGQDDEPFICTMDCIGAKE 446 HK Y+ DM + A L+S LY +RF PY+ I+AG+ + + + + D IG E Sbjct: 116 HK-YRFDYRSDMSVDLCAELLSRNLYYRRFFPYYTGAILAGIDEHGKGAVFSYDPIGCIE 174 Query: 445 LAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQ 332 S GA E M P ++ + T+S+ Sbjct: 175 ---------RLGYSASGAAEPMIIPFLDCQIGHVTLSE 203
>PSB4_DROME (Q9VNA5) Probable proteasome subunit beta type 4 (EC 3.4.25.1)| Length = 268 Score = 34.7 bits (78), Expect = 0.25 Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 8/98 (8%) Frame = -1 Query: 595 DMKPETFASLVSSMLYEK--RFGPYFCQPIIAGLGQDDEPFICTMDCIGAKELAKDFVVS 422 +MKP++ AS ++ +LY + R P + ++ G+ + P++ +D G +D+VV+ Sbjct: 131 EMKPKSLASWMTRVLYNRRSRMNPLYIDVVVGGVDNEGTPYLANVDLRGRS--YEDYVVA 188 Query: 421 GTASESLYGACESMYKPN------MEPEELFETISQAL 326 + L KP +E EL T + L Sbjct: 189 TGFARHLAVPLVREKKPKDRDFTAVEASELIRTCMEVL 226
>COQ10_YEAST (Q08058) Coenzyme Q-binding protein COQ10, mitochondrial precursor| Length = 207 Score = 32.7 bits (73), Expect = 0.95 Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 17/94 (18%) Frame = -1 Query: 628 KHKLYQLREERDMKPETFASLVSSMLYEKRFGPYFC------------QPIIAGL----G 497 + + Y LR+ + P T + VS + K F PY +P+IAGL Sbjct: 42 REQRYVLRKAINAPPSTVYAAVSEVAQYKEFIPYCVDSFVDKRNPVDNKPLIAGLRVGFK 101 Query: 496 QDDEPFICTMDCIGAKELAKDF-VVSGTASESLY 398 Q DE FIC + C K+ + VV+ T S +L+ Sbjct: 102 QYDEEFICNVTC---KDTDHTYTVVAETISHNLF 132
>ATPD_CAEEL (Q09544) ATP synthase delta chain, mitochondrial precursor (EC| 3.6.3.14) Length = 163 Score = 32.0 bits (71), Expect = 1.6 Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 3/69 (4%) Frame = -1 Query: 433 FVVSGTASESLYGACESMYKPNMEPEELFETISQALLSSVDRDCLSGWGGYVLIVTA--- 263 FV SGT S ++ G+C+ + + ++ EE+ E+ ++A L + R SG G V A Sbjct: 91 FVSSGTLSVNIDGSCQVLAEEVLKVEEIDESAARAELDAAQR--ASGEGSEVARAEAQIR 148 Query: 262 TEVQERVLK 236 EV E ++K Sbjct: 149 AEVAEALIK 157
>PSB2_YEAST (P22141) Proteasome component C11 (EC 3.4.25.1) (Macropain subunit| C11) (Proteinase YSCE subunit 11) (Multicatalytic endopeptidase complex subunit C11) Length = 198 Score = 31.6 bits (70), Expect = 2.1 Identities = 22/93 (23%), Positives = 45/93 (48%), Gaps = 3/93 (3%) Frame = -1 Query: 622 KLYQLREERDMKPETFASLVSSMLYE--KRFGPYFCQPIIAGLG-QDDEPFICTMDCIGA 452 +LY +RE+ ++ P+ +S V L + + PY +I G + ++P + +D +G Sbjct: 65 QLYSIREDYELSPQAVSSFVRQELAKSIRSRRPYQVNVLIGGYDKKKNKPELYQIDYLGT 124 Query: 451 KELAKDFVVSGTASESLYGACESMYKPNMEPEE 353 K + + G + + + Y+P+M EE Sbjct: 125 K-VELPYGAHGYSGFYTFSLLDHHYRPDMTTEE 156
>PSB8_PIG (Q29576) Proteasome subunit beta type 8 (EC 3.4.25.1) (Proteasome| component C13) (Macropain subunit C13) (Multicatalytic endopeptidase complex subunit C13) (Fragment) Length = 104 Score = 30.8 bits (68), Expect = 3.6 Identities = 25/115 (21%), Positives = 48/115 (41%), Gaps = 9/115 (7%) Frame = -1 Query: 622 KLYQLREERDMKPETFASLVSSMLYEKRFGPYFCQPIIAGLGQDDEPFICTMDCIG---- 455 +LY LR + + L S+M+Y+ R G+G IC D G Sbjct: 1 RLYYLRNGARISVSAASKLXSNMMYQYR-----------GMGLSMGSMICGWDKKGPGLY 49 Query: 454 -----AKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALLSSVDRD 305 L+ + +G+ + YG +S ++ ++ EE ++ +A++ + RD Sbjct: 50 YVDENGTRLSGNMFSTGSGNTYAYGVMDSGHRYDLSIEEAYDLGRRAIVHATHRD 104
>MUC13_MOUSE (P19467) Mucin-13 precursor (Cell surface antigen 114/A10)| (Lymphocyte antigen 64) Length = 573 Score = 30.0 bits (66), Expect = 6.2 Identities = 22/68 (32%), Positives = 29/68 (42%) Frame = +3 Query: 303 QSRSTDDNRACDMVSKSSSGSMFGLYMDSQAPYRDSDAVPETTKSLASSFAPMQSMVQIN 482 QS+S + + SS G+ + SQ+P S V TT S + P Q Sbjct: 147 QSQSPGSSSQASTTTSSSGGASPPTTVQSQSP-GSSSQVSTTTSSSGGASPPTTVQSQSP 205 Query: 483 GSSSCPSP 506 GSSS P P Sbjct: 206 GSSSQPGP 213 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 87,799,410 Number of Sequences: 219361 Number of extensions: 1751883 Number of successful extensions: 5468 Number of sequences better than 10.0: 60 Number of HSP's better than 10.0 without gapping: 5336 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5452 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6086476506 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
