ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd17e11 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK070915.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064O06, full insert sequence Length = 1040 Score = 492 bits (248), Expect = e-136 Identities = 383/428 (89%) Strand = Plus / Minus Query: 222 tagtccatcctgcccttgagcactcgctcttgaacttcggtcgctgtcacaatcagaaca 281 ||||||||||||||||||| ||| | ||||| |||||||| | |||||||| ||||||| Sbjct: 709 tagtccatcctgcccttgatcacacactcttttacttcggttggtgtcacaagcagaaca 650 Query: 282 tagcctccccacccactgaggcagtcgcgatcaactgatgacaacagagcttgtgatatg 341 |||||||||| ||||||||||| || ||||||||||||||| |||||||||||| || Sbjct: 649 aagcctccccaaccactgaggcaatcacgatcaactgatgactgcagagcttgtgagata 590 Query: 342 gtctcaaagagttcctcaggttccatgttcggtttgtacatggattcacaggcaccatat 401 |||||||||||||| |||||||||||||| |||||||||||||| ||||| ||||||||| Sbjct: 589 gtctcaaagagttcttcaggttccatgtttggtttgtacatggactcacaagcaccatat 530 Query: 402 agagactctgatgctgtccctgagacaacaaaatccttagcaagttcctttgcaccaatg 461 |||||||| ||||||||||| || ||||| ||||||||||| |||||||||||||||||| Sbjct: 529 agagactccgatgctgtccccgatacaacgaaatccttagctagttcctttgcaccaatg 470 Query: 462 cagtccatggtacaaataaatggctcgtcatcctgtccaagtccagcaataataggctgg 521 |||||||||||||||||||||||||| | |||| |||||||||||| |||| ||||||| Sbjct: 469 cagtccatggtacaaataaatggctcattgtcctctccaagtccagcgataacaggctgg 410 Query: 522 cagaagtacggcccaaatctcttctcgtagagcatggaggagacgaggctggcgaaggtc 581 |||||||| || |||||||||||||||||||| | | |||||||||||||||||||||| Sbjct: 409 cagaagtatggtccaaatctcttctcgtagaggagagcggagacgaggctggcgaaggtc 350 Query: 582 tcgggcttcatgtcgcgctcctcccgcagctggtacagcttgtgcttgaacacgagccgc 641 | |||||||||||| | |||||||||||| || |||||||||||| ||||||| || ||| Sbjct: 349 tggggcttcatgtccctctcctcccgcagttgatacagcttgtgcctgaacaccaggcgc 290 Query: 642 tggtacag 649 |||||||| Sbjct: 289 tggtacag 282
>dbj|AB026565.1| Oryza sativa (japonica cultivar-group) OsPBC1 mRNA for beta 3 subunit of 20S proteasome, complete cds Length = 929 Score = 492 bits (248), Expect = e-136 Identities = 383/428 (89%) Strand = Plus / Minus Query: 222 tagtccatcctgcccttgagcactcgctcttgaacttcggtcgctgtcacaatcagaaca 281 ||||||||||||||||||| ||| | ||||| |||||||| | |||||||| ||||||| Sbjct: 711 tagtccatcctgcccttgatcacacactcttttacttcggttggtgtcacaagcagaaca 652 Query: 282 tagcctccccacccactgaggcagtcgcgatcaactgatgacaacagagcttgtgatatg 341 |||||||||| ||||||||||| || ||||||||||||||| |||||||||||| || Sbjct: 651 aagcctccccaaccactgaggcaatcacgatcaactgatgactgcagagcttgtgagata 592 Query: 342 gtctcaaagagttcctcaggttccatgttcggtttgtacatggattcacaggcaccatat 401 |||||||||||||| |||||||||||||| |||||||||||||| ||||| ||||||||| Sbjct: 591 gtctcaaagagttcttcaggttccatgtttggtttgtacatggactcacaagcaccatat 532 Query: 402 agagactctgatgctgtccctgagacaacaaaatccttagcaagttcctttgcaccaatg 461 |||||||| ||||||||||| || ||||| ||||||||||| |||||||||||||||||| Sbjct: 531 agagactccgatgctgtccccgatacaacgaaatccttagctagttcctttgcaccaatg 472 Query: 462 cagtccatggtacaaataaatggctcgtcatcctgtccaagtccagcaataataggctgg 521 |||||||||||||||||||||||||| | |||| |||||||||||| |||| ||||||| Sbjct: 471 cagtccatggtacaaataaatggctcattgtcctctccaagtccagcgataacaggctgg 412 Query: 522 cagaagtacggcccaaatctcttctcgtagagcatggaggagacgaggctggcgaaggtc 581 |||||||| || |||||||||||||||||||| | | |||||||||||||||||||||| Sbjct: 411 cagaagtatggtccaaatctcttctcgtagaggagagcggagacgaggctggcgaaggtc 352 Query: 582 tcgggcttcatgtcgcgctcctcccgcagctggtacagcttgtgcttgaacacgagccgc 641 | |||||||||||| | |||||||||||| || |||||||||||| ||||||| || ||| Sbjct: 351 tggggcttcatgtccctctcctcccgcagttgatacagcttgtgcctgaacaccaggcgc 292 Query: 642 tggtacag 649 |||||||| Sbjct: 291 tggtacag 284
>gb|BT018301.1| Zea mays clone EL01T0206D12.c mRNA sequence Length = 1117 Score = 291 bits (147), Expect = 1e-75 Identities = 333/395 (84%) Strand = Plus / Minus Query: 255 acttcggtcgctgtcacaatcagaacatagcctccccacccactgaggcagtcgcgatca 314 ||||| |||| ||||||||||| |||||||| ||||| || || |||||||| || || Sbjct: 817 acttcagtcggtgtcacaatcaacacatagccaccccatccgctaaggcagtcacggtct 758 Query: 315 actgatgacaacagagcttgtgatatggtctcaaagagttcctcaggttccatgttcggt 374 |||||||| ||| ||||| ||||| ||||| |||||||| ||||||| ||||| ||| Sbjct: 757 actgatgaattcagggcttgggatatagtctcgaagagttcatcaggttgcatgtccggc 698 Query: 375 ttgtacatggattcacaggcaccatatagagactctgatgctgtccctgagacaacaaaa 434 ||||||||||||||||| |||||||| | ||| ||||||||||| || || ||||||||| Sbjct: 697 ttgtacatggattcacaagcaccatacaaagattctgatgctgttccagaaacaacaaaa 638 Query: 435 tccttagcaagttcctttgcaccaatgcagtccatggtacaaataaatggctcgtcatcc 494 ||||| || || ||||||||||| | |||||||||||||||||| ||||| ||| || Sbjct: 637 tccttggccagctcctttgcaccgaggcagtccatggtacaaatgaatggtacgttgtca 578 Query: 495 tgtccaagtccagcaataataggctggcagaagtacggcccaaatctcttctcgtagagc 554 | ||||||||||||||| | ||||||||||| || ||||||||||||||||||||||| Sbjct: 577 tctccaagtccagcaatgactggctggcagaaatatggcccaaatctcttctcgtagagg 518 Query: 555 atggaggagacgaggctggcgaaggtctcgggcttcatgtcgcgctcctcccgcagctgg 614 | | ||||| |||||||| |||||||| ||||||||||| | |||||| |||||||| Sbjct: 517 agcgcagagacaaggctggcaaaggtctcaggcttcatgtccctctcctcgcgcagctga 458 Query: 615 tacagcttgtgcttgaacacgagccgctggtacag 649 |||||||||||| |||| || | |||||||||||| Sbjct: 457 tacagcttgtgcctgaagaccaaccgctggtacag 423
>gb|AY104986.1| Zea mays PCO060249 mRNA sequence Length = 1122 Score = 276 bits (139), Expect = 9e-71 Identities = 331/395 (83%) Strand = Plus / Minus Query: 255 acttcggtcgctgtcacaatcagaacatagcctccccacccactgaggcagtcgcgatca 314 ||||| |||| ||||||||||| |||||||| ||||| || || |||||||| || || Sbjct: 796 acttcagtcggtgtcacaatcaacacatagccaccccatccgctaaggcagtcacggtct 737 Query: 315 actgatgacaacagagcttgtgatatggtctcaaagagttcctcaggttccatgttcggt 374 |||||||| ||| ||||| ||||| ||||| |||||||| ||||||| ||||| ||| Sbjct: 736 actgatgaattcagggcttgggatatagtctcgaagagttcatcaggttgcatgtccggc 677 Query: 375 ttgtacatggattcacaggcaccatatagagactctgatgctgtccctgagacaacaaaa 434 ||||||||||||||||| |||||||| | ||| ||||||||||| || || ||||||||| Sbjct: 676 ttgtacatggattcacaagcaccatacaaagattctgatgctgttccagaaacaacaaaa 617 Query: 435 tccttagcaagttcctttgcaccaatgcagtccatggtacaaataaatggctcgtcatcc 494 ||||| || || ||||||||||| | ||||||||| |||||||||||||| ||| || Sbjct: 616 tccttggccagctcctttgcacctaagcagtccatagtacaaataaatggtacgttgtca 557 Query: 495 tgtccaagtccagcaataataggctggcagaagtacggcccaaatctcttctcgtagagc 554 | ||||||||||||||| | |||||||| || || ||||| ||||||||||||||||| Sbjct: 556 tctccaagtccagcaatgactggctggcaaaaatatggcccgaatctcttctcgtagagg 497 Query: 555 atggaggagacgaggctggcgaaggtctcgggcttcatgtcgcgctcctcccgcagctgg 614 | | ||||| |||||||| |||||||| ||||||||||| | |||||| |||||||| Sbjct: 496 agcgcagagacaaggctggcaaaggtctcaggcttcatgtccctctcctcgcgcagctga 437 Query: 615 tacagcttgtgcttgaacacgagccgctggtacag 649 |||||||||||| |||| || | |||||||||||| Sbjct: 436 tacagcttgtgcctgaagaccaaccgctggtacag 402
>ref|XM_464345.1| Oryza sativa (japonica cultivar-group), mRNA Length = 615 Score = 268 bits (135), Expect = 2e-68 Identities = 354/427 (82%) Strand = Plus / Minus Query: 223 agtccatcctgcccttgagcactcgctcttgaacttcggtcgctgtcacaatcagaacat 282 |||||||||| ||||||| ||||| ||| ||||| || || | ||||||| ||||||| Sbjct: 613 agtccatccttcccttgatcactctctcctgaacctctgtgggagtcacaaggagaacat 554 Query: 283 agcctccccacccactgaggcagtcgcgatcaactgatgacaacagagcttgtgatatgg 342 | || ||||| ||||| ||||| || |||||||| || | | ||| |||||||| || | Sbjct: 553 aaccaccccagccactcaggcaatctcgatcaacagaagcctgcagcgcttgtgagatcg 494 Query: 343 tctcaaagagttcctcaggttccatgttcggtttgtacatggattcacaggcaccatata 402 |||| || ||||| || ||||||||| | || || |||||||| ||||| |||||||||| Sbjct: 493 tctcgaatagttcttccggttccatgcttggcttatacatggactcacaagcaccatata 434 Query: 403 gagactctgatgctgtccctgagacaacaaaatccttagcaagttcctttgcaccaatgc 462 | || ||||| || || || || || |||||||| || || |||||||| |||||||||| Sbjct: 433 gtgattctgaagcagtgccagaaaccacaaaatctttcgctagttccttggcaccaatgc 374 Query: 463 agtccatggtacaaataaatggctcgtcatcctgtccaagtccagcaataataggctggc 522 | ||||||||||| ||||||||||| |||| | ||| | ||||||||||| || |||| Sbjct: 373 aatccatggtacatataaatggctcatcattatctcctaatccagcaataactggttggc 314 Query: 523 agaagtacggcccaaatctcttctcgtagagcatggaggagacgaggctggcgaaggtct 582 |||||||||||||||| |||||||||||||| | | |||||||||||| ||||| | || Sbjct: 313 agaagtacggcccaaacctcttctcgtagaggagcgcggagacgaggctagcgaatgcct 254 Query: 583 cgggcttcatgtcgcgctcctcccgcagctggtacagcttgtgcttgaacacgagccgct 642 |||||||||||| | |||||||| |||||||||||| |||||| ||||||| ||||||| Sbjct: 253 ggggcttcatgtccctctcctccctcagctggtacagtttgtgcctgaacaccagccgct 194 Query: 643 ggtacag 649 ||||||| Sbjct: 193 ggtacag 187
>gb|AY107983.1| Zea mays PCO080261 mRNA sequence Length = 640 Score = 161 bits (81), Expect = 4e-36 Identities = 219/265 (82%) Strand = Plus / Minus Query: 223 agtccatcctgcccttgagcactcgctcttgaacttcggtcgctgtcacaatcagaacat 282 |||||||||| ||||| ||||||| ||| || ||||| || ||| |||| ||||||| Sbjct: 342 agtccatccttcccttcagcactctctcctgcacttcagtgtgtgtgacaacaagaacat 283 Query: 283 agcctccccacccactgaggcagtcgcgatcaactgatgacaacagagcttgtgatatgg 342 | |||||||| || |||||||||||||||||||| |||| | || ||||| || || | Sbjct: 282 aacctccccagccgctgaggcagtcgcgatcaacagatgcctgcaatgcttgcgagattg 223 Query: 343 tctcaaagagttcctcaggttccatgttcggtttgtacatggattcacaggcaccatata 402 |||| || ||||| || ||||||||||| || || |||||||| ||||| |||||||| | Sbjct: 222 tctcgaaaagttcttcgggttccatgtttggcttatacatggactcacaagcaccataaa 163 Query: 403 gagactctgatgctgtccctgagacaacaaaatccttagcaagttcctttgcaccaatgc 462 | |||||||| || || || ||||| |||||||| || || |||||||| |||||||||| Sbjct: 162 gtgactctgaagcagtaccggagaccacaaaatcttttgctagttccttggcaccaatgc 103 Query: 463 agtccatggtacaaataaatggctc 487 ||||||||||||| ||||| ||||| Sbjct: 102 agtccatggtacatataaacggctc 78
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 121 bits (61), Expect = 3e-24 Identities = 85/93 (91%) Strand = Plus / Plus Query: 449 ctttgcaccaatgcagtccatggtacaaataaatggctcgtcatcctgtccaagtccagc 508 ||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||| Sbjct: 25817389 ctttgcaccaatgcagtccatggtacaaataaatggctcattgtcctctccaagtccagc 25817448 Query: 509 aataataggctggcagaagtacggcccaaatct 541 |||| ||||||||||||||| || |||||||| Sbjct: 25817449 gataacaggctggcagaagtatggtccaaatct 25817481 Score = 119 bits (60), Expect = 1e-23 Identities = 96/108 (88%) Strand = Plus / Plus Query: 540 ctcttctcgtagagcatggaggagacgaggctggcgaaggtctcgggcttcatgtcgcgc 599 |||||||||||||| | | ||||||||||||||||||||||| |||||||||||| | | Sbjct: 25818566 ctcttctcgtagaggagagcggagacgaggctggcgaaggtctggggcttcatgtccctc 25818625 Query: 600 tcctcccgcagctggtacagcttgtgcttgaacacgagccgctggtac 647 ||||||||||| || |||||||||||| ||||||| || ||||||||| Sbjct: 25818626 tcctcccgcagttgatacagcttgtgcctgaacaccaggcgctggtac 25818673 Score = 113 bits (57), Expect = 7e-22 Identities = 87/97 (89%) Strand = Plus / Plus Query: 269 cacaatcagaacatagcctccccacccactgaggcagtcgcgatcaactgatgacaacag 328 ||||| ||||||| |||||||||| ||||||||||| || ||||||||||||||| ||| Sbjct: 25816398 cacaagcagaacaaagcctccccaaccactgaggcaatcacgatcaactgatgactgcag 25816457 Query: 329 agcttgtgatatggtctcaaagagttcctcaggttcc 365 ||||||||| || |||||||||||||| ||||||||| Sbjct: 25816458 agcttgtgagatagtctcaaagagttcttcaggttcc 25816494 Score = 107 bits (54), Expect = 5e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 364 ccatgttcggtttgtacatggattcacaggcaccatatagagactctgatgctgtccctg 423 ||||||| |||||||||||||| ||||| ||||||||||||||||| ||||||||||| | Sbjct: 25816694 ccatgtttggtttgtacatggactcacaagcaccatatagagactccgatgctgtccccg 25816753 Query: 424 agacaacaaaatccttagcaagttcc 449 | ||||| ||||||||||| |||||| Sbjct: 25816754 atacaacgaaatccttagctagttcc 25816779 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 222 tagtccatcctgcccttgagcactcgctcttgaacttcggt 262 ||||||||||||||||||| ||| | ||||| |||||||| Sbjct: 25816088 tagtccatcctgcccttgatcacacactcttttacttcggt 25816128
>dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0416A11 Length = 171519 Score = 121 bits (61), Expect = 3e-24 Identities = 85/93 (91%) Strand = Plus / Plus Query: 449 ctttgcaccaatgcagtccatggtacaaataaatggctcgtcatcctgtccaagtccagc 508 ||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||| Sbjct: 99593 ctttgcaccaatgcagtccatggtacaaataaatggctcattgtcctctccaagtccagc 99652 Query: 509 aataataggctggcagaagtacggcccaaatct 541 |||| ||||||||||||||| || |||||||| Sbjct: 99653 gataacaggctggcagaagtatggtccaaatct 99685 Score = 119 bits (60), Expect = 1e-23 Identities = 96/108 (88%) Strand = Plus / Plus Query: 540 ctcttctcgtagagcatggaggagacgaggctggcgaaggtctcgggcttcatgtcgcgc 599 |||||||||||||| | | ||||||||||||||||||||||| |||||||||||| | | Sbjct: 100770 ctcttctcgtagaggagagcggagacgaggctggcgaaggtctggggcttcatgtccctc 100829 Query: 600 tcctcccgcagctggtacagcttgtgcttgaacacgagccgctggtac 647 ||||||||||| || |||||||||||| ||||||| || ||||||||| Sbjct: 100830 tcctcccgcagttgatacagcttgtgcctgaacaccaggcgctggtac 100877 Score = 113 bits (57), Expect = 7e-22 Identities = 87/97 (89%) Strand = Plus / Plus Query: 269 cacaatcagaacatagcctccccacccactgaggcagtcgcgatcaactgatgacaacag 328 ||||| ||||||| |||||||||| ||||||||||| || ||||||||||||||| ||| Sbjct: 98602 cacaagcagaacaaagcctccccaaccactgaggcaatcacgatcaactgatgactgcag 98661 Query: 329 agcttgtgatatggtctcaaagagttcctcaggttcc 365 ||||||||| || |||||||||||||| ||||||||| Sbjct: 98662 agcttgtgagatagtctcaaagagttcttcaggttcc 98698 Score = 107 bits (54), Expect = 5e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 364 ccatgttcggtttgtacatggattcacaggcaccatatagagactctgatgctgtccctg 423 ||||||| |||||||||||||| ||||| ||||||||||||||||| ||||||||||| | Sbjct: 98898 ccatgtttggtttgtacatggactcacaagcaccatatagagactccgatgctgtccccg 98957 Query: 424 agacaacaaaatccttagcaagttcc 449 | ||||| ||||||||||| |||||| Sbjct: 98958 atacaacgaaatccttagctagttcc 98983 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 222 tagtccatcctgcccttgagcactcgctcttgaacttcggt 262 ||||||||||||||||||| ||| | ||||| |||||||| Sbjct: 98292 tagtccatcctgcccttgatcacacactcttttacttcggt 98332
>ref|NM_106393.2| Arabidopsis thaliana PBC2; peptidase/ threonine endopeptidase AT1G77440 (PBC2) transcript variant AT1G77440.1 mRNA, complete cds Length = 984 Score = 115 bits (58), Expect = 2e-22 Identities = 133/158 (84%) Strand = Plus / Minus Query: 285 cctccccacccactgaggcagtcgcgatcaactgatgacaacagagcttgtgatatggtc 344 |||||||||||||| || || ||||| |||||||| || | || |||||||| || ||| Sbjct: 640 cctccccacccactaagacaatcgcggtcaactgaagagagaagtgcttgtgaaattgtc 581 Query: 345 tcaaagagttcctcaggttccatgttcggtttgtacatggattcacaggcaccatataga 404 || || |||||||||| |||||| | |||||| |||||| ||||||||||||||||||| Sbjct: 580 tcgaatagttcctcagcttccatatctggtttgaacatggcttcacaggcaccatataga 521 Query: 405 gactctgatgctgtccctgagacaacaaaatccttagc 442 || ||||| || || || |||||||||||||| ||||| Sbjct: 520 gattctgaagcagttcccgagacaacaaaatctttagc 483
>ref|NM_001036217.1| Arabidopsis thaliana PBC2; peptidase/ threonine endopeptidase AT1G77440 (PBC2) transcript variant AT1G77440.2 mRNA, complete cds Length = 960 Score = 115 bits (58), Expect = 2e-22 Identities = 133/158 (84%) Strand = Plus / Minus Query: 285 cctccccacccactgaggcagtcgcgatcaactgatgacaacagagcttgtgatatggtc 344 |||||||||||||| || || ||||| |||||||| || | || |||||||| || ||| Sbjct: 551 cctccccacccactaagacaatcgcggtcaactgaagagagaagtgcttgtgaaattgtc 492 Query: 345 tcaaagagttcctcaggttccatgttcggtttgtacatggattcacaggcaccatataga 404 || || |||||||||| |||||| | |||||| |||||| ||||||||||||||||||| Sbjct: 491 tcgaatagttcctcagcttccatatctggtttgaacatggcttcacaggcaccatataga 432 Query: 405 gactctgatgctgtccctgagacaacaaaatccttagc 442 || ||||| || || || |||||||||||||| ||||| Sbjct: 431 gattctgaagcagttcccgagacaacaaaatctttagc 394
>gb|AY081735.1| Arabidopsis thaliana At1g77440/T5M16_3 mRNA, complete cds Length = 615 Score = 115 bits (58), Expect = 2e-22 Identities = 133/158 (84%) Strand = Plus / Minus Query: 285 cctccccacccactgaggcagtcgcgatcaactgatgacaacagagcttgtgatatggtc 344 |||||||||||||| || || ||||| |||||||| || | || |||||||| || ||| Sbjct: 551 cctccccacccactaagacaatcgcggtcaactgaagagagaagtgcttgtgaaattgtc 492 Query: 345 tcaaagagttcctcaggttccatgttcggtttgtacatggattcacaggcaccatataga 404 || || |||||||||| |||||| | |||||| |||||| ||||||||||||||||||| Sbjct: 491 tcgaatagttcctcagcttccatatctggtttgaacatggcttcacaggcaccatataga 432 Query: 405 gactctgatgctgtccctgagacaacaaaatccttagc 442 || ||||| || || || |||||||||||||| ||||| Sbjct: 431 gattctgaagcagttcccgagacaacaaaatctttagc 394
>gb|AF385730.1|AF385730 Arabidopsis thaliana At1g77440/T5M16_3 mRNA, complete cds Length = 949 Score = 115 bits (58), Expect = 2e-22 Identities = 133/158 (84%) Strand = Plus / Minus Query: 285 cctccccacccactgaggcagtcgcgatcaactgatgacaacagagcttgtgatatggtc 344 |||||||||||||| || || ||||| |||||||| || | || |||||||| || ||| Sbjct: 601 cctccccacccactaagacaatcgcggtcaactgaagagagaagtgcttgtgaaattgtc 542 Query: 345 tcaaagagttcctcaggttccatgttcggtttgtacatggattcacaggcaccatataga 404 || || |||||||||| |||||| | |||||| |||||| ||||||||||||||||||| Sbjct: 541 tcgaatagttcctcagcttccatatctggtttgaacatggcttcacaggcaccatataga 482 Query: 405 gactctgatgctgtccctgagacaacaaaatccttagc 442 || ||||| || || || |||||||||||||| ||||| Sbjct: 481 gattctgaagcagttcccgagacaacaaaatctttagc 444
>gb|AF043533.1|AF043533 Arabidopsis thaliana 20S proteasome beta subunit PBC2 (PBC2) mRNA, complete cds Length = 1128 Score = 115 bits (58), Expect = 2e-22 Identities = 133/158 (84%) Strand = Plus / Minus Query: 285 cctccccacccactgaggcagtcgcgatcaactgatgacaacagagcttgtgatatggtc 344 |||||||||||||| || || ||||| |||||||| || | || |||||||| || ||| Sbjct: 793 cctccccacccactaagacaatcgcggtcaactgaagagagaagtgcttgtgaaattgtc 734 Query: 345 tcaaagagttcctcaggttccatgttcggtttgtacatggattcacaggcaccatataga 404 || || |||||||||| |||||| | |||||| |||||| ||||||||||||||||||| Sbjct: 733 tcgaatagttcctcagcttccatatctggtttgaacatggcttcacaggcaccatataga 674 Query: 405 gactctgatgctgtccctgagacaacaaaatccttagc 442 || ||||| || || || |||||||||||||| ||||| Sbjct: 673 gattctgaagcagttcccgagacaacaaaatctttagc 636
>gb|BT013408.1| Lycopersicon esculentum clone 135724R, mRNA sequence Length = 869 Score = 111 bits (56), Expect = 3e-21 Identities = 245/308 (79%) Strand = Plus / Minus Query: 285 cctccccacccactgaggcagtcgcgatcaactgatgacaacagagcttgtgatatggtc 344 |||||||| ||||| | ||||| || || || ||||||||||| || || || |||||| Sbjct: 638 cctccccaaccacttaaacagtcacggtctacagatgacaacagtgcctgagagatggtc 579 Query: 345 tcaaagagttcctcaggttccatgttcggtttgtacatggattcacaggcaccatataga 404 ||||| | ||| || ||| |||||| || |||||||||| ||||| ||||| || || Sbjct: 578 tcaaacaattcttccggtcccatgtcgggcttgtacatggcctcacaagcaccgtaaagt 519 Query: 405 gactctgatgctgtccctgagacaacaaaatccttagcaagttcctttgcaccaatgcag 464 || || ||||| || || || ||||||||||| || || || |||||||| ||||| || Sbjct: 518 gattcagatgcagtgccagaaacaacaaaatcttttgcgagctcctttgctccaatagag 459 Query: 465 tccatggtacaaataaatggctcgtcatcctgtccaagtccagcaataataggctggcag 524 ||||| || |||||||| |||| |||||| | ||| | ||||||||| | ||| ||||| Sbjct: 458 tccattgtgcaaataaaaggcttgtcatcttctcctaatccagcaattacaggttggcac 399 Query: 525 aagtacggcccaaatctcttctcgtagagcatggaggagacgaggctggcgaaggtctcg 584 ||||| || ||||| || ||||| || ||||| | || || |||||||| ||||||||| Sbjct: 398 aagtatggaccaaaccttttctcataaagcatagcagatacaaggctggcaaaggtctcg 339 Query: 585 ggcttcat 592 |||||||| Sbjct: 338 ggcttcat 331
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 103 bits (52), Expect = 7e-19 Identities = 94/108 (87%) Strand = Plus / Plus Query: 540 ctcttctcgtagagcatggaggagacgaggctggcgaaggtctcgggcttcatgtcgcgc 599 |||||||||||||| | | |||||||||||| ||||| | || |||||||||||| | | Sbjct: 4600772 ctcttctcgtagaggagcgcggagacgaggctagcgaatgcctggggcttcatgtccctc 4600831 Query: 600 tcctcccgcagctggtacagcttgtgcttgaacacgagccgctggtac 647 ||||||| |||||||||||| |||||| ||||||| |||||||||||| Sbjct: 4600832 tcctccctcagctggtacagtttgtgcctgaacaccagccgctggtac 4600879 Score = 83.8 bits (42), Expect = 7e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 453 gcaccaatgcagtccatggtacaaataaatggctcgtcatcctgtccaagtccagcaata 512 ||||||||||| ||||||||||| ||||||||||| |||| | ||| | |||||||||| Sbjct: 4600110 gcaccaatgcaatccatggtacatataaatggctcatcattatctcctaatccagcaata 4600169 Query: 513 ataggctggcagaagtacggcccaaa 538 | || |||||||||||||||||||| Sbjct: 4600170 actggttggcagaagtacggcccaaa 4600195 Score = 40.1 bits (20), Expect = 8.9 Identities = 59/72 (81%) Strand = Plus / Plus Query: 378 tacatggattcacaggcaccatatagagactctgatgctgtccctgagacaacaaaatcc 437 |||||||| ||||| ||||||||||| || ||||| || || || || || |||||||| Sbjct: 4599423 tacatggactcacaagcaccatatagtgattctgaagcagtgccagaaaccacaaaatct 4599482 Query: 438 ttagcaagttcc 449 || || |||||| Sbjct: 4599483 ttcgctagttcc 4599494
>dbj|AP004087.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1297_C09 Length = 163378 Score = 103 bits (52), Expect = 7e-19 Identities = 94/108 (87%) Strand = Plus / Plus Query: 540 ctcttctcgtagagcatggaggagacgaggctggcgaaggtctcgggcttcatgtcgcgc 599 |||||||||||||| | | |||||||||||| ||||| | || |||||||||||| | | Sbjct: 136151 ctcttctcgtagaggagcgcggagacgaggctagcgaatgcctggggcttcatgtccctc 136210 Query: 600 tcctcccgcagctggtacagcttgtgcttgaacacgagccgctggtac 647 ||||||| |||||||||||| |||||| ||||||| |||||||||||| Sbjct: 136211 tcctccctcagctggtacagtttgtgcctgaacaccagccgctggtac 136258 Score = 83.8 bits (42), Expect = 7e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 453 gcaccaatgcagtccatggtacaaataaatggctcgtcatcctgtccaagtccagcaata 512 ||||||||||| ||||||||||| ||||||||||| |||| | ||| | |||||||||| Sbjct: 135489 gcaccaatgcaatccatggtacatataaatggctcatcattatctcctaatccagcaata 135548 Query: 513 ataggctggcagaagtacggcccaaa 538 | || |||||||||||||||||||| Sbjct: 135549 actggttggcagaagtacggcccaaa 135574 Score = 40.1 bits (20), Expect = 8.9 Identities = 59/72 (81%) Strand = Plus / Plus Query: 378 tacatggattcacaggcaccatatagagactctgatgctgtccctgagacaacaaaatcc 437 |||||||| ||||| ||||||||||| || ||||| || || || || || |||||||| Sbjct: 134802 tacatggactcacaagcaccatatagtgattctgaagcagtgccagaaaccacaaaatct 134861 Query: 438 ttagcaagttcc 449 || || |||||| Sbjct: 134862 ttcgctagttcc 134873
>gb|AC010704.6|AC010704 Arabidopsis thaliana chromosome 1 BAC T5M16 genomic sequence, complete sequence Length = 103353 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 372 ggtttgtacatggattcacaggcaccatatagagactctgatgctgtccctgagacaaca 431 |||||| |||||| ||||||||||||||||||||| ||||| || || || ||||||||| Sbjct: 7966 ggtttgaacatggcttcacaggcaccatatagagattctgaagcagttcccgagacaaca 7907 Query: 432 aaatccttagc 442 ||||| ||||| Sbjct: 7906 aaatctttagc 7896 Score = 50.1 bits (25), Expect = 0.009 Identities = 67/81 (82%) Strand = Plus / Minus Query: 285 cctccccacccactgaggcagtcgcgatcaactgatgacaacagagcttgtgatatggtc 344 |||||||||||||| || || ||||| |||||||| || | || |||||||| || ||| Sbjct: 8410 cctccccacccactaagacaatcgcggtcaactgaagagagaagtgcttgtgaaattgtc 8351 Query: 345 tcaaagagttcctcaggttcc 365 || || |||||||||| |||| Sbjct: 8350 tcgaatagttcctcagcttcc 8330
>emb|AJ291739.1|NTA291739 Nicotiana tabacum partial mRNA for putative beta 3 proteasome subunit (b3 gene) Length = 574 Score = 73.8 bits (37), Expect = 6e-10 Identities = 166/209 (79%) Strand = Plus / Minus Query: 339 atggtctcaaagagttcctcaggttccatgttcggtttgtacatggattcacaggcacca 398 ||||||||||| | ||| || ||| |||||| || ||| |||||| || || |||||| Sbjct: 535 atggtctcaaacaattcttccggtcccatgtcaggcttgaacatggcctcgcatgcacca 476 Query: 399 tatagagactctgatgctgtccctgagacaacaaaatccttagcaagttcctttgcacca 458 || ||||| ||||| || || || | || |||||||| || ||||| |||||||| ||| Sbjct: 475 tacagagattctgaggcagtaccagcaacgacaaaatctttggcaagctcctttgctcca 416 Query: 459 atgcagtccatggtacaaataaatggctcgtcatcctgtccaagtccagcaataataggc 518 || ||||||| || ||||||||||||| |||||| | ||| | ||||||||| | ||| Sbjct: 415 atagagtccattgtgcaaataaatggcttgtcatcatctcctaatccagcaattacaggt 356 Query: 519 tggcagaagtacggcccaaatctcttctc 547 ||||| ||||| || ||||| || ||||| Sbjct: 355 tggcaaaagtatggaccaaaccttttctc 327
>ref|NM_102021.2| Arabidopsis thaliana PBC1; peptidase/ threonine endopeptidase AT1G21720 (PBC1) mRNA, complete cds Length = 918 Score = 67.9 bits (34), Expect = 4e-08 Identities = 262/338 (77%) Strand = Plus / Minus Query: 285 cctccccacccactgaggcagtcgcgatcaactgatgacaacagagcttgtgatatggtc 344 |||||||| ||||| || || || || ||||| ||||| | || ||||| ||||| ||| Sbjct: 662 cctccccaaccactcagacaatcacggtcaacagatgagagaagtgcttgcgatattgtc 603 Query: 345 tcaaagagttcctcaggttccatgttcggtttgtacatggattcacaggcaccatataga 404 || || | |||||||| |||||| | || |||||||| | ||||| || ||||| || Sbjct: 602 tcgaacaattcctcagcttccatatctggcttgtacattgcctcacaagctccatagagt 543 Query: 405 gactctgatgctgtccctgagacaacaaaatccttagcaagttcctttgcaccaatgcag 464 || ||||| || || || || ||||||||||| ||||| | || || || || || || Sbjct: 542 gattctgaagcagttccagatacaacaaaatctttagctaactctttggctccgatagag 483 Query: 465 tccatggtacaaataaatggctcgtcatcctgtccaagtccagcaataataggctggcag 524 ||||| || ||||| || |||| |||||| | ||| | |||||||| | ||| ||||| Sbjct: 482 tccatcgtgcaaatgaaaggcttgtcatcatctcccaagccagcaatcacaggttggcat 423 Query: 525 aagtacggcccaaatctcttctcgtagagcatggaggagacgaggctggcgaaggtctcg 584 ||||| || ||||||||||||||||| || |||| ||||| || || ||||| || || Sbjct: 422 aagtaaggaccaaatctcttctcgtaaaggatggctgagacaagactagcgaaagtttca 363 Query: 585 ggcttcatgtcgcgctcctcccgcagctggtacagctt 622 ||||||||||| | ||| |||| |||||||| ||||| Sbjct: 362 ggcttcatgtctctctcttccctaagctggtaaagctt 325
>emb|Y13173.1|ATY13173 Arabidopsis thaliana mRNA for proteasome subunit prct Length = 860 Score = 67.9 bits (34), Expect = 4e-08 Identities = 262/338 (77%) Strand = Plus / Minus Query: 285 cctccccacccactgaggcagtcgcgatcaactgatgacaacagagcttgtgatatggtc 344 |||||||| ||||| || || || || ||||| ||||| | || ||||| ||||| ||| Sbjct: 590 cctccccaaccactcagacaatcacggtcaacagatgagagaagtgcttgcgatattgtc 531 Query: 345 tcaaagagttcctcaggttccatgttcggtttgtacatggattcacaggcaccatataga 404 || || | |||||||| |||||| | || |||||||| | ||||| || ||||| || Sbjct: 530 tcgaacaattcctcagcttccatatctggcttgtacattgcctcacaagctccatagagt 471 Query: 405 gactctgatgctgtccctgagacaacaaaatccttagcaagttcctttgcaccaatgcag 464 || ||||| || || || || ||||||||||| ||||| | || || || || || || Sbjct: 470 gattctgaagcagttccagatacaacaaaatctttagctaactctttggctccgatagag 411 Query: 465 tccatggtacaaataaatggctcgtcatcctgtccaagtccagcaataataggctggcag 524 ||||| || ||||| || |||| |||||| | ||| | |||||||| | ||| ||||| Sbjct: 410 tccatcgtgcaaatgaaaggcttgtcatcatctcccaagccagcaatcacaggttggcat 351 Query: 525 aagtacggcccaaatctcttctcgtagagcatggaggagacgaggctggcgaaggtctcg 584 ||||| || ||||||||||||||||| || |||| ||||| || || ||||| || || Sbjct: 350 aagtaaggaccaaatctcttctcgtaaaggatggctgagacaagactagcgaaagtttca 291 Query: 585 ggcttcatgtcgcgctcctcccgcagctggtacagctt 622 ||||||||||| | ||| |||| |||||||| ||||| Sbjct: 290 ggcttcatgtctctctcttccctaagctggtaaagctt 253
>gb|AY114628.1| Arabidopsis thaliana proteasome subunit mRNA, complete cds Length = 648 Score = 67.9 bits (34), Expect = 4e-08 Identities = 262/338 (77%) Strand = Plus / Minus Query: 285 cctccccacccactgaggcagtcgcgatcaactgatgacaacagagcttgtgatatggtc 344 |||||||| ||||| || || || || ||||| ||||| | || ||||| ||||| ||| Sbjct: 551 cctccccaaccactcagacaatcacggtcaacagatgagagaagtgcttgcgatattgtc 492 Query: 345 tcaaagagttcctcaggttccatgttcggtttgtacatggattcacaggcaccatataga 404 || || | |||||||| |||||| | || |||||||| | ||||| || ||||| || Sbjct: 491 tcgaacaattcctcagcttccatatctggcttgtacattgcctcacaagctccatagagt 432 Query: 405 gactctgatgctgtccctgagacaacaaaatccttagcaagttcctttgcaccaatgcag 464 || ||||| || || || || ||||||||||| ||||| | || || || || || || Sbjct: 431 gattctgaagcagttccagatacaacaaaatctttagctaactctttggctccgatagag 372 Query: 465 tccatggtacaaataaatggctcgtcatcctgtccaagtccagcaataataggctggcag 524 ||||| || ||||| || |||| |||||| | ||| | |||||||| | ||| ||||| Sbjct: 371 tccatcgtgcaaatgaaaggcttgtcatcatctcccaagccagcaatcacaggttggcat 312 Query: 525 aagtacggcccaaatctcttctcgtagagcatggaggagacgaggctggcgaaggtctcg 584 ||||| || ||||||||||||||||| || |||| ||||| || || ||||| || || Sbjct: 311 aagtaaggaccaaatctcttctcgtaaaggatggctgagacaagactagcgaaagtttca 252 Query: 585 ggcttcatgtcgcgctcctcccgcagctggtacagctt 622 ||||||||||| | ||| |||| |||||||| ||||| Sbjct: 251 ggcttcatgtctctctcttccctaagctggtaaagctt 214
>gb|AY065070.1| Arabidopsis thaliana proteasome subunit (F8K7.15) mRNA, complete cds Length = 865 Score = 67.9 bits (34), Expect = 4e-08 Identities = 262/338 (77%) Strand = Plus / Minus Query: 285 cctccccacccactgaggcagtcgcgatcaactgatgacaacagagcttgtgatatggtc 344 |||||||| ||||| || || || || ||||| ||||| | || ||||| ||||| ||| Sbjct: 610 cctccccaaccactcagacaatcacggtcaacagatgagagaagtgcttgcgatattgtc 551 Query: 345 tcaaagagttcctcaggttccatgttcggtttgtacatggattcacaggcaccatataga 404 || || | |||||||| |||||| | || |||||||| | ||||| || ||||| || Sbjct: 550 tcgaacaattcctcagcttccatatctggcttgtacattgcctcacaagctccatagagt 491 Query: 405 gactctgatgctgtccctgagacaacaaaatccttagcaagttcctttgcaccaatgcag 464 || ||||| || || || || ||||||||||| ||||| | || || || || || || Sbjct: 490 gattctgaagcagttccagatacaacaaaatctttagctaactctttggctccgatagag 431 Query: 465 tccatggtacaaataaatggctcgtcatcctgtccaagtccagcaataataggctggcag 524 ||||| || ||||| || |||| |||||| | ||| | |||||||| | ||| ||||| Sbjct: 430 tccatcgtgcaaatgaaaggcttgtcatcatctcccaagccagcaatcacaggttggcat 371 Query: 525 aagtacggcccaaatctcttctcgtagagcatggaggagacgaggctggcgaaggtctcg 584 ||||| || ||||||||||||||||| || |||| ||||| || || ||||| || || Sbjct: 370 aagtaaggaccaaatctcttctcgtaaaggatggctgagacaagactagcgaaagtttca 311 Query: 585 ggcttcatgtcgcgctcctcccgcagctggtacagctt 622 ||||||||||| | ||| |||| |||||||| ||||| Sbjct: 310 ggcttcatgtctctctcttccctaagctggtaaagctt 273
>gb|AF344327.1| Arabidopsis thaliana clone C00240 (e) putative 20S proteasome beta subunit PBC2 (At1g21720) mRNA, complete cds Length = 615 Score = 67.9 bits (34), Expect = 4e-08 Identities = 262/338 (77%) Strand = Plus / Minus Query: 285 cctccccacccactgaggcagtcgcgatcaactgatgacaacagagcttgtgatatggtc 344 |||||||| ||||| || || || || ||||| ||||| | || ||||| ||||| ||| Sbjct: 551 cctccccaaccactcagacaatcacggtcaacagatgagagaagtgcttgcgatattgtc 492 Query: 345 tcaaagagttcctcaggttccatgttcggtttgtacatggattcacaggcaccatataga 404 || || | |||||||| |||||| | || |||||||| | ||||| || ||||| || Sbjct: 491 tcgaacaattcctcagcttccatatctggcttgtacattgcctcacaagctccatagagt 432 Query: 405 gactctgatgctgtccctgagacaacaaaatccttagcaagttcctttgcaccaatgcag 464 || ||||| || || || || ||||||||||| ||||| | || || || || || || Sbjct: 431 gattctgaagcagttccagatacaacaaaatctttagctaactctttggctccgatagag 372 Query: 465 tccatggtacaaataaatggctcgtcatcctgtccaagtccagcaataataggctggcag 524 ||||| || ||||| || |||| |||||| | ||| | |||||||| | ||| ||||| Sbjct: 371 tccatcgtgcaaatgaaaggcttgtcatcatctcccaagccagcaatcacaggttggcat 312 Query: 525 aagtacggcccaaatctcttctcgtagagcatggaggagacgaggctggcgaaggtctcg 584 ||||| || ||||||||||||||||| || |||| ||||| || || ||||| || || Sbjct: 311 aagtaaggaccaaatctcttctcgtaaaggatggctgagacaagactagcgaaagtttca 252 Query: 585 ggcttcatgtcgcgctcctcccgcagctggtacagctt 622 ||||||||||| | ||| |||| |||||||| ||||| Sbjct: 251 ggcttcatgtctctctcttccctaagctggtaaagctt 214
>gb|AY085532.1| Arabidopsis thaliana clone 15624 mRNA, complete sequence Length = 898 Score = 67.9 bits (34), Expect = 4e-08 Identities = 262/338 (77%) Strand = Plus / Minus Query: 285 cctccccacccactgaggcagtcgcgatcaactgatgacaacagagcttgtgatatggtc 344 |||||||| ||||| || || || || ||||| ||||| | || ||||| ||||| ||| Sbjct: 662 cctccccaaccactcagacaatcacggtcaacagatgagagaagtgcttgcgatattgtc 603 Query: 345 tcaaagagttcctcaggttccatgttcggtttgtacatggattcacaggcaccatataga 404 || || | |||||||| |||||| | || |||||||| | ||||| || ||||| || Sbjct: 602 tcgaacaattcctcagcttccatatctggcttgtacattgcctcacaagctccatagagt 543 Query: 405 gactctgatgctgtccctgagacaacaaaatccttagcaagttcctttgcaccaatgcag 464 || ||||| || || || || ||||||||||| ||||| | || || || || || || Sbjct: 542 gattctgaagcagttccagatacaacaaaatctttagctaactctttggctccgatagag 483 Query: 465 tccatggtacaaataaatggctcgtcatcctgtccaagtccagcaataataggctggcag 524 ||||| || ||||| || |||| |||||| | ||| | |||||||| | ||| ||||| Sbjct: 482 tccatcgtgcaaatgaaaggcttgtcatcatctcccaagccagcaatcacaggttggcat 423 Query: 525 aagtacggcccaaatctcttctcgtagagcatggaggagacgaggctggcgaaggtctcg 584 ||||| || ||||||||||||||||| || |||| ||||| || || ||||| || || Sbjct: 422 aagtaaggaccaaatctcttctcgtaaagaatggctgagacaagactagcgaaagtttca 363 Query: 585 ggcttcatgtcgcgctcctcccgcagctggtacagctt 622 ||||||||||| | ||| |||| |||||||| ||||| Sbjct: 362 ggcttcatgtctctctcttccctaagctggtaaagctt 325
>gb|AF043532.1|AF043532 Arabidopsis thaliana 20S proteasome beta subunit PBC1 truncated protein (PBC1) mRNA, complete cds Length = 860 Score = 67.9 bits (34), Expect = 4e-08 Identities = 262/338 (77%) Strand = Plus / Minus Query: 285 cctccccacccactgaggcagtcgcgatcaactgatgacaacagagcttgtgatatggtc 344 |||||||| ||||| || || || || ||||| ||||| | || ||||| ||||| ||| Sbjct: 590 cctccccaaccactcagacaatcacggtcaacagatgagagaagtgcttgcgatattgtc 531 Query: 345 tcaaagagttcctcaggttccatgttcggtttgtacatggattcacaggcaccatataga 404 || || | |||||||| |||||| | || |||||||| | ||||| || ||||| || Sbjct: 530 tcgaacaattcctcagcttccatatctggcttgtacattgcctcacaagctccatagagt 471 Query: 405 gactctgatgctgtccctgagacaacaaaatccttagcaagttcctttgcaccaatgcag 464 || ||||| || || || || ||||||||||| ||||| | || || || || || || Sbjct: 470 gattctgaagcagttccagatacaacaaaatctttagctaactctttggctccgatagag 411 Query: 465 tccatggtacaaataaatggctcgtcatcctgtccaagtccagcaataataggctggcag 524 ||||| || ||||| || |||| |||||| | ||| | |||||||| | ||| ||||| Sbjct: 410 tccatcgtgcaaatgaaaggcttgtcatcatctcccaagccagcaatcacaggttggcat 351 Query: 525 aagtacggcccaaatctcttctcgtagagcatggaggagacgaggctggcgaaggtctcg 584 ||||| || ||||||||||||||||| || |||| ||||| || || ||||| || || Sbjct: 350 aagtaaggaccaaatctcttctcgtaaaggatggctgagacaagactagcgaaagtttca 291 Query: 585 ggcttcatgtcgcgctcctcccgcagctggtacagctt 622 ||||||||||| | ||| |||| |||||||| ||||| Sbjct: 290 ggcttcatgtctctctcttccctaagctggtaaagctt 253
>gb|AC161015.4| Pan troglodytes BAC clone CH251-489I22 from chromosome unknown, complete sequence Length = 186290 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 55 aaaaaggatataaagtaaaagaaaacaaa 83 |||||||||||||||||||| |||||||| Sbjct: 67485 aaaaaggatataaagtaaaaaaaaacaaa 67513
>gb|AC135605.25| Medicago truncatula clone mth2-7m1, complete sequence Length = 121648 Score = 44.1 bits (22), Expect = 0.57 Identities = 64/78 (82%) Strand = Plus / Minus Query: 288 ccccacccactgaggcagtcgcgatcaactgatgacaacagagcttgtgatatggtctca 347 ||||| ||||| || ||||| || || || ||||| ||||| ||||| || ||||||||| Sbjct: 104215 ccccagccactaagacagtcacggtcgacagatgataacagtgcttgggagatggtctca 104156 Query: 348 aagagttcctcaggttcc 365 || | |||||||| |||| Sbjct: 104155 aacaattcctcagcttcc 104138
>gb|AC124964.17| Medicago truncatula clone mth2-27c4, complete sequence Length = 114519 Score = 44.1 bits (22), Expect = 0.57 Identities = 64/78 (82%) Strand = Plus / Plus Query: 288 ccccacccactgaggcagtcgcgatcaactgatgacaacagagcttgtgatatggtctca 347 ||||| ||||| || ||||| || || || ||||| ||||| ||||| || ||||||||| Sbjct: 15673 ccccagccactaagacagtcacggtcgacagatgataacagtgcttgggagatggtctca 15732 Query: 348 aagagttcctcaggttcc 365 || | |||||||| |||| Sbjct: 15733 aacaattcctcagcttcc 15750
>emb|AL646099.4| Human DNA sequence from clone RP11-65B7 on chromosome 13q13.3-14.2, complete sequence Length = 106772 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Plus Query: 66 aaagtaaaagaaaacaaatgtctctt 91 |||| ||||||||||||||||||||| Sbjct: 36996 aaagaaaaagaaaacaaatgtctctt 37021
>emb|AL109915.10|HSDJ120N9 Human DNA sequence from clone RP1-120N9 on chromosome 6q13-15 Contains the SNAP91 gene for synaptosomal-associated protein, 91 kD homolog (mouse) (KIAA0656) and a CpG island, complete sequence Length = 167018 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 34 ctcaccattccttcatcatata 55 |||||||||||||||||||||| Sbjct: 157377 ctcaccattccttcatcatata 157356
>gb|AC168879.4| Mus musculus BAC clone RP24-407B6 from chromosome 13, complete sequence Length = 169877 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 gatataaagtaaaagaaaaca 81 ||||||||||||||||||||| Sbjct: 39594 gatataaagtaaaagaaaaca 39614
>ref|XM_510148.1| PREDICTED: Pan troglodytes dicer1 (LOC453137), mRNA Length = 8091 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 225 tccatcctgcccttgagcact 245 ||||||||||||||||||||| Sbjct: 7586 tccatcctgcccttgagcact 7566
>gb|AC121583.3| Mus musculus BAC clone RP23-259K16 from 13, complete sequence Length = 207129 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 gatataaagtaaaagaaaaca 81 ||||||||||||||||||||| Sbjct: 160018 gatataaagtaaaagaaaaca 160038
>ref|XM_501232.1| Yarrowia lipolytica CLIB122, YALI0B22682g predicted mRNA Length = 2406 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 375 ttgtacatggattcacaggca 395 ||||||||||||||||||||| Sbjct: 407 ttgtacatggattcacaggca 387
>ref|NM_030621.2| Homo sapiens Dicer1, Dcr-1 homolog (Drosophila) (DICER1), transcript variant 2, mRNA Length = 10220 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 225 tccatcctgcccttgagcact 245 ||||||||||||||||||||| Sbjct: 4009 tccatcctgcccttgagcact 3989
>ref|NM_177438.1| Homo sapiens Dicer1, Dcr-1 homolog (Drosophila) (DICER1), transcript variant 1, mRNA Length = 10276 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 225 tccatcctgcccttgagcact 245 ||||||||||||||||||||| Sbjct: 4065 tccatcctgcccttgagcact 4045
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 597 cgctcctcccgcagctggtac 617 ||||||||||||||||||||| Sbjct: 1027748 cgctcctcccgcagctggtac 1027728
>emb|AJ132261.2|HSA132261 Homo sapiens mRNA for hypothetical helicase K12H4.8-like protein Length = 6200 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 225 tccatcctgcccttgagcact 245 ||||||||||||||||||||| Sbjct: 4068 tccatcctgcccttgagcact 4048
>dbj|AK091513.1| Homo sapiens cDNA FLJ34194 fis, clone FCBBF3018591, highly similar to Homo sapiens mRNA for helicase-MOI Length = 2777 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 225 tccatcctgcccttgagcact 245 ||||||||||||||||||||| Sbjct: 805 tccatcctgcccttgagcact 785
>dbj|AK001041.1| Homo sapiens cDNA FLJ10179 fis, clone HEMBA1004199, highly similar to Homo sapiens mRNA for KIAA0928 protein Length = 1966 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 225 tccatcctgcccttgagcact 245 ||||||||||||||||||||| Sbjct: 1714 tccatcctgcccttgagcact 1694
>gb|AC090839.1|AC090839 Caenorhabditis briggsae cosmid CB022O18, complete sequence Length = 74100 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 ctcaccattccttcatcatat 54 ||||||||||||||||||||| Sbjct: 1367 ctcaccattccttcatcatat 1347
>gb|AC019144.9| Homo sapiens BAC clone RP11-733L22 from 2, complete sequence Length = 146004 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 tataaagtaaaagaaaacaaa 83 ||||||||||||||||||||| Sbjct: 75284 tataaagtaaaagaaaacaaa 75264
>gb|AC083811.22| Homo sapiens 12 BAC RP11-810G6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 173067 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 415 ctgtccctgagacaacaaaat 435 ||||||||||||||||||||| Sbjct: 123728 ctgtccctgagacaacaaaat 123748
>gb|AC173210.3| Mus musculus BAC clone RP23-29I5 from chromosome 13, complete sequence Length = 228881 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 gatataaagtaaaagaaaaca 81 ||||||||||||||||||||| Sbjct: 69089 gatataaagtaaaagaaaaca 69109
>gb|BC046934.1| Homo sapiens cDNA clone IMAGE:6046171, containing frame-shift errors Length = 6013 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 225 tccatcctgcccttgagcact 245 ||||||||||||||||||||| Sbjct: 4026 tccatcctgcccttgagcact 4006
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 375 ttgtacatggattcacaggca 395 ||||||||||||||||||||| Sbjct: 2978060 ttgtacatggattcacaggca 2978040
>emb|AL845471.7| Mouse DNA sequence from clone RP23-320N1 on chromosome 2, complete sequence Length = 127825 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 atataaagtaaaagaaaacaa 82 ||||||||||||||||||||| Sbjct: 38244 atataaagtaaaagaaaacaa 38224
>emb|AL607066.23| Mouse DNA sequence from clone RP23-406N5 on chromosome 4, complete sequence Length = 194837 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 tcatataaaaaggatataaag 69 ||||||||||||||||||||| Sbjct: 185571 tcatataaaaaggatataaag 185591
>emb|AL356017.3|CNS05TD7 Human chromosome 14 DNA sequence BAC C-2240H23 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 149635 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 225 tccatcctgcccttgagcact 245 ||||||||||||||||||||| Sbjct: 26324 tccatcctgcccttgagcact 26344
>dbj|AB028449.1| Homo sapiens mRNA for helicase-MOI, complete cds Length = 7037 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 225 tccatcctgcccttgagcact 245 ||||||||||||||||||||| Sbjct: 4015 tccatcctgcccttgagcact 3995
>dbj|AB023145.2| Homo sapiens mRNA for KIAA0928 protein, partial cds Length = 6037 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 225 tccatcctgcccttgagcact 245 ||||||||||||||||||||| Sbjct: 4065 tccatcctgcccttgagcact 4045
>ref|NM_001035866.1| Arabidopsis thaliana unknown protein AT1G03470 transcript variant AT1G03470.2 mRNA, complete cds Length = 1175 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 ataaagtaaaagaaaacaaa 83 |||||||||||||||||||| Sbjct: 1128 ataaagtaaaagaaaacaaa 1109
>gb|AC102440.12| Mus musculus chromosome 1, clone RP24-146C18, complete sequence Length = 144770 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 ataaagtaaaagaaaacaaa 83 |||||||||||||||||||| Sbjct: 94716 ataaagtaaaagaaaacaaa 94697
>gb|AC107732.11| Mus musculus chromosome 7, clone RP23-424E6, complete sequence Length = 194045 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 gatgacaacagagcttgtga 337 |||||||||||||||||||| Sbjct: 23613 gatgacaacagagcttgtga 23632
>ref|XM_959388.1| Neurospora crassa OR74A hypothetical protein (NCU03304.1) partial mRNA Length = 864 Score = 40.1 bits (20), Expect = 8.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 327 agagcttgtgatatggtctcaaagagttcctc 358 ||||| |||||||||||||| ||||| ||||| Sbjct: 758 agagcctgtgatatggtctcgaagaggtcctc 727
>ref|XM_330739.1| Neurospora crassa OR74A hypothetical protein (NCU03304.1) partial mRNA Length = 864 Score = 40.1 bits (20), Expect = 8.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 327 agagcttgtgatatggtctcaaagagttcctc 358 ||||| |||||||||||||| ||||| ||||| Sbjct: 758 agagcctgtgatatggtctcgaagaggtcctc 727
>gb|AY355799.1| Canis familiaris isolate cOR51Q1P olfactory receptor family 51 subfamily Q pseudogene, partial sequence Length = 845 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 tgttccccacgatggagatg 32 |||||||||||||||||||| Sbjct: 37 tgttccccacgatggagatg 18
>ref|XM_542383.2| PREDICTED: Canis familiaris cOR51Q3 olfactory receptor family 51 subfamily Q-like (cOR51Q3), mRNA Length = 948 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 tgttccccacgatggagatg 32 |||||||||||||||||||| Sbjct: 133 tgttccccacgatggagatg 114
>emb|CR956635.11| Pig DNA sequence from clone CH242-184L20 on chromosome 17, complete sequence Length = 211741 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 532 gcccaaatctcttctcgtagagca 555 |||||||||||||||| ||||||| Sbjct: 193487 gcccaaatctcttctcatagagca 193510
>gb|AC009902.13| Homo sapiens chromosome 8, clone RP11-363E6, complete sequence Length = 217249 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 62 atataaagtaaaagaaaacaaatg 85 |||| ||||||||||||||||||| Sbjct: 49593 atattaagtaaaagaaaacaaatg 49616
>emb|AL606458.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084A10, complete sequence Length = 144811 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 tcatcatataaaaaggatat 65 |||||||||||||||||||| Sbjct: 97820 tcatcatataaaaaggatat 97839
>ref|XM_647682.1| Entamoeba histolytica HM-1:IMSS protein kinase (105.t00018) partial mRNA Length = 5889 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 55 aaaaaggatataaagtaaaagaaa 78 ||||||||||||||| |||||||| Sbjct: 851 aaaaaggatataaagaaaaagaaa 874
>emb|AL451141.13| Human DNA sequence from clone RP11-265E5 on chromosome 6, complete sequence Length = 63966 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 agaaaacaaatgtctcttct 93 |||||||||||||||||||| Sbjct: 59913 agaaaacaaatgtctcttct 59932
>emb|AL356357.22| Human DNA sequence from clone RP4-550F15 on chromosome 1 Contains the KCNK1 gene for potassium channel subfamily K member 1 and one CpG island, complete sequence Length = 71371 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 taaagtaaaagaaaacaaat 84 |||||||||||||||||||| Sbjct: 44532 taaagtaaaagaaaacaaat 44551
>emb|AL355357.13| Human DNA sequence from clone RP11-69I22 on chromosome 6, complete sequence Length = 116261 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 419 ccctgagacaacaaaatcct 438 |||||||||||||||||||| Sbjct: 22330 ccctgagacaacaaaatcct 22349
>emb|AL139087.13| Human DNA sequence from clone RP11-83D23 on chromosome 13q31.3-33.1, complete sequence Length = 170776 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 ttcatcatataaaaaggata 64 |||||||||||||||||||| Sbjct: 154647 ttcatcatataaaaaggata 154666
>emb|AL121930.13|HS1046E21 Human DNA sequence from clone RP5-1046E21 on chromosome 6q14.1-14.3, complete sequence Length = 135434 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 57 aaaggatataaagtaaaagaaaac 80 ||||||||||||| |||||||||| Sbjct: 36572 aaaggatataaagaaaaagaaaac 36549
>emb|AL603702.14| Mouse DNA sequence from clone RP23-406A14 on chromosome 11 Contains a protease (prosome, macropain) 26S subunit ATPase 1 (Psmc1) pseudogene and a CpG island, complete sequence Length = 197265 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 agaaaacaaatgtctcttct 93 |||||||||||||||||||| Sbjct: 137322 agaaaacaaatgtctcttct 137341
>gb|AC026617.5| Homo sapiens chromosome 8, clone RP11-769H1, complete sequence Length = 147670 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 62 atataaagtaaaagaaaacaaatg 85 |||| ||||||||||||||||||| Sbjct: 130560 atattaagtaaaagaaaacaaatg 130583
>gb|AF181449.3| Homo sapiens chromosome 8 clone CTB-402C7 map 8q21-q23, complete sequence Length = 42874 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 62 atataaagtaaaagaaaacaaatg 85 |||| ||||||||||||||||||| Sbjct: 27114 atattaagtaaaagaaaacaaatg 27091
>gb|AC022507.26| Homo sapiens 12 BAC RP11-25J3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 154954 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 aaaagaaaacaaatgtctct 90 |||||||||||||||||||| Sbjct: 133871 aaaagaaaacaaatgtctct 133890
>gb|AC111194.4| Homo sapiens BAC clone RP11-463H12 from 4, complete sequence Length = 136450 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 aaaagaaaacaaatgtctct 90 |||||||||||||||||||| Sbjct: 67246 aaaagaaaacaaatgtctct 67265
>gb|AC093006.4| Homo sapiens 3 BAC RP11-394D14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 215577 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 tctcaccattccttcatcat 52 |||||||||||||||||||| Sbjct: 76636 tctcaccattccttcatcat 76655
>ref|XM_693655.1| PREDICTED: Danio rerio similar to HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 (LOC570206), mRNA Length = 3418 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 541 tcttctcgtagagcatggag 560 |||||||||||||||||||| Sbjct: 3346 tcttctcgtagagcatggag 3327
>ref|NG_004939.1| Canis familiaris cOR51Q1P olfactory receptor family 51 subfamily Q pseudogene (cOR51Q1P) on chromosome 21 Length = 845 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 tgttccccacgatggagatg 32 |||||||||||||||||||| Sbjct: 37 tgttccccacgatggagatg 18
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 tcatcatataaaaaggatat 65 |||||||||||||||||||| Sbjct: 21448070 tcatcatataaaaaggatat 21448089
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 310 gatcaactgatgacaacagagcttgtgatatggtct 345 |||||| |||||| |||| |||||||||||| |||| Sbjct: 9876816 gatcaattgatgaaaacatagcttgtgatatagtct 9876851
>gb|AC108068.3| Homo sapiens BAC clone RP11-574H22 from 2, complete sequence Length = 79667 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 417 gtccctgagacaacaaaatc 436 |||||||||||||||||||| Sbjct: 60457 gtccctgagacaacaaaatc 60438
>gb|AC004816.1|AC004816 Homo sapiens PAC clone RP6-65G23 from 14q24.3, complete sequence Length = 166200 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 550 agagcatggaggagacgagg 569 |||||||||||||||||||| Sbjct: 81197 agagcatggaggagacgagg 81216
>ref|NM_214075.1| Sus scrofa 25-hydroxyvitamin D3-24-hydroxylase (CYP24A1), mRNA Length = 3153 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 532 gcccaaatctcttctcgtagagca 555 |||||||||||||||| ||||||| Sbjct: 1102 gcccaaatctcttctcatagagca 1079
>gb|AF245504.1|AF245504 Sus scrofa 25-hydroxyvitamin D3-24-hydroxylase mRNA, complete cds Length = 3153 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 532 gcccaaatctcttctcgtagagca 555 |||||||||||||||| ||||||| Sbjct: 1102 gcccaaatctcttctcatagagca 1079
>gb|AC078820.28| Homo sapiens 12 BAC RP11-114H23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 164812 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 aaaagaaaacaaatgtctct 90 |||||||||||||||||||| Sbjct: 64542 aaaagaaaacaaatgtctct 64523
>gb|AC002560.2|AC002560 Genomic sequence for Arabidopsis thaliana BAC F21B7 from chromosome I, complete sequence Length = 101176 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 ataaagtaaaagaaaacaaa 83 |||||||||||||||||||| Sbjct: 29773 ataaagtaaaagaaaacaaa 29792
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 521 gcagaagtacggcccaaatctcttctcg 548 |||||||||||| || |||||||||||| Sbjct: 4029227 gcagaagtacgggccgaatctcttctcg 4029254
>dbj|AK176021.1| Arabidopsis thaliana mRNA for hypothetical protein, partial cds, clone: RAFL22-73-C15 Length = 402 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 ataaagtaaaagaaaacaaa 83 |||||||||||||||||||| Sbjct: 345 ataaagtaaaagaaaacaaa 326
>dbj|AP005724.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0017I18 Length = 146304 Score = 40.1 bits (20), Expect = 8.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 310 gatcaactgatgacaacagagcttgtgatatggtct 345 |||||| |||||| |||| |||||||||||| |||| Sbjct: 32263 gatcaattgatgaaaacatagcttgtgatatagtct 32298
>dbj|AP005701.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0095I04 Length = 138924 Score = 40.1 bits (20), Expect = 8.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 310 gatcaactgatgacaacagagcttgtgatatggtct 345 |||||| |||||| |||| |||||||||||| |||| Sbjct: 59503 gatcaattgatgaaaacatagcttgtgatatagtct 59538
>emb|BX469899.6| Zebrafish DNA sequence from clone CH211-155K24 in linkage group 4, complete sequence Length = 184184 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 ctgagacaacaaaatcctta 440 |||||||||||||||||||| Sbjct: 120701 ctgagacaacaaaatcctta 120720
>emb|BX005290.10| Zebrafish DNA sequence from clone CH211-127M10 in linkage group 6, complete sequence Length = 186793 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 ataaagtaaaagaaaacaaa 83 |||||||||||||||||||| Sbjct: 42005 ataaagtaaaagaaaacaaa 41986
>emb|AL844862.12| Mouse DNA sequence from clone RP23-355P22 on chromosome 2, complete sequence Length = 165362 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 tacatggattcacaggcacc 397 |||||||||||||||||||| Sbjct: 159932 tacatggattcacaggcacc 159951
>emb|AL954867.12| Zebrafish DNA sequence from clone DKEY-1G17 in linkage group 6, complete sequence Length = 222787 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 ataaagtaaaagaaaacaaa 83 |||||||||||||||||||| Sbjct: 92210 ataaagtaaaagaaaacaaa 92229
>gb|AC004104.1|AC004104 Homo sapiens 12q24 PAC RPCI5-942N13 (Roswell Park Cancer Institute Human PAC library) complete sequence Length = 136037 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 276 agaacatagcctccccacccactg 299 |||||||||| ||||||||||||| Sbjct: 51130 agaacatagcttccccacccactg 51153
>gb|CP000168.1| Drosophila melanogaster genomic scaffold 211000022278924 Length = 48586 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 ataaagtaaaagaaaacaaa 83 |||||||||||||||||||| Sbjct: 29734 ataaagtaaaagaaaacaaa 29715
>gb|AF058707.1|AF058707 Oncorhynchus mykiss proteasome subunit C10-11 mRNA, complete cds Length = 840 Score = 40.1 bits (20), Expect = 8.9 Identities = 35/40 (87%) Strand = Plus / Minus Query: 330 gcttgtgatatggtctcaaagagttcctcaggttccatgt 369 ||||| || ||||||||||| || ||||| |||||||||| Sbjct: 590 gcttgggagatggtctcaaacaggtcctctggttccatgt 551
>gb|AC124490.4| Mus musculus BAC clone RP23-453I1 from 16, complete sequence Length = 189215 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 ataaagtaaaagaaaacaaa 83 |||||||||||||||||||| Sbjct: 143977 ataaagtaaaagaaaacaaa 143996
>emb|CR848818.10| Zebrafish DNA sequence from clone DKEY-38O19 in linkage group 16, complete sequence Length = 208738 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 atataaagtaaaagaaaaca 81 |||||||||||||||||||| Sbjct: 96769 atataaagtaaaagaaaaca 96750
>emb|AL772291.9| Mouse DNA sequence from clone RP23-395G1 on chromosome 4, complete sequence Length = 222046 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 ataaagtaaaagaaaacaaa 83 |||||||||||||||||||| Sbjct: 124672 ataaagtaaaagaaaacaaa 124691
>emb|AL671765.6| Mouse DNA sequence from clone RP23-100L23 on chromosome X, complete sequence Length = 191093 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 aaaagaaaacaaatgtctct 90 |||||||||||||||||||| Sbjct: 3874 aaaagaaaacaaatgtctct 3855 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,705,171 Number of Sequences: 3902068 Number of extensions: 5705171 Number of successful extensions: 122484 Number of sequences better than 10.0: 98 Number of HSP's better than 10.0 without gapping: 98 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 122111 Number of HSP's gapped (non-prelim): 368 length of query: 649 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 626 effective length of database: 17,143,297,704 effective search space: 10731704362704 effective search space used: 10731704362704 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
