>DYHC_MOUSE (Q9JHU4) Dynein heavy chain, cytosolic (DYHC) (Cytoplasmic dynein|
            heavy chain 1) (DHC1) (Dynein heavy chain 1, cytoplasmic
            1)
          Length = 4644

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = +2

Query: 143  RIFSTNECSPPVPLSRIQNGRFFIHKP 223
            R+F T E +P VP++ ++ GR F+ +P
Sbjct: 4121 RLFLTMEINPKVPVNLLRAGRIFVFEP 4147

>DYHC_DROME (P37276) Dynein heavy chain, cytosolic (DYHC)|
          Length = 4639

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = +2

Query: 143  RIFSTNECSPPVPLSRIQNGRFFIHKP 223
            R+F T E +P VP++ ++ GR F+ +P
Sbjct: 4107 RLFLTMEINPKVPVNLLRAGRIFVFEP 4133

>DYHC_HUMAN (Q14204) Dynein heavy chain, cytosolic (DYHC) (Cytoplasmic dynein|
            heavy chain 1) (DHC1) (Dynein heavy chain 1, cytoplasmic
            1)
          Length = 4646

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = +2

Query: 143  RIFSTNECSPPVPLSRIQNGRFFIHKP 223
            R+F T E +P VP++ ++ GR F+ +P
Sbjct: 4123 RLFLTMEINPKVPVNLLRAGRIFVFEP 4149

>RP1_MOUSE (P56716) Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein|
            homolog)
          Length = 2095

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -1

Query: 406  LSSTLLEEPSKNKHIQTIRSMPEVGLFY 323
            LS T + EPS   H+   +S PEV L Y
Sbjct: 1011 LSQTTINEPSTKSHLSIEKSRPEVKLVY 1038

>LRP11_HUMAN (Q86VZ4) Low-density lipoprotein receptor-related protein 11|
           precursor
          Length = 500

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +1

Query: 337 PRACFGWSGC-ACSCLVPRAALSSVGLP*LRASPRAVL 447
           P A  GW  C A  C  PR +++ V LP   A P AVL
Sbjct: 121 PAAVRGWRQCVAACCSEPRCSVAVVELPRRPAPPAAVL 158

>CFAH_HUMAN (P08603) Complement factor H precursor (H factor 1)|
          Length = 1231

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -1

Query: 154 GKYTCGEEAEFVSCILLKMCALVVLQETRVLSIFTWF 44
           G  TCG++        +K C + V    R  + FTWF
Sbjct: 490 GSITCGKDGWSAQPTCIKSCDIPVFMNARTKNDFTWF 526

>DYHC_RAT (P38650) Dynein heavy chain, cytosolic (DYHC) (Cytoplasmic dynein|
            heavy chain 1) (DHC1) (Dynein heavy chain 1, cytoplasmic
            1) (MAP 1C)
          Length = 4644

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = +2

Query: 143  RIFSTNECSPPVPLSRIQNGRFFIHKP 223
            R+F T E +P VP++ ++ GR F+ +P
Sbjct: 4121 RLFLTMEINPRVPVNLLRAGRIFVFEP 4147

>TILS_HELPJ (Q9ZLB5) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)|
           (tRNA(Ile)-lysidine synthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase)
          Length = 338

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
 Frame = +2

Query: 17  IKKEQVFHEEPSKN*---KNSCFLKHNKSTHLQQYTGHKLSLLSTRIFSTNECSPPVPLS 187
           + K+Q F E+ S +    K +CF KH  +  +Q Y+   +              P +P+S
Sbjct: 164 LAKDQKFFEDDSNSSLKFKRNCFRKHYANALMQHYSKGIIQSFKFLDKEKERLYPLIPVS 223

Query: 188 RIQNGRFFIH 217
           ++    FF H
Sbjct: 224 QMHGITFFKH 233

>UL27_HCMVA (P16763) Hypothetical protein UL27|
          Length = 608

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -3

Query: 413 SPTELNAARGTKQEQAHPDHPKHA 342
           +P +L AA G K++   P HPKHA
Sbjct: 78  TPEDLAAAGGQKKKTPAPKHPKHA 101

>SUVH5_ARATH (O82175) Histone-lysine N-methyltransferase, H3 lysine-9 specific|
           SUVH5 (EC 2.1.1.43) (Histone H3-K9 methyltransferase 5)
           (H3-K9-HMTase 5) (Suppressor of variegation 3-9 homolog
           protein 5) (Su(var)3-9 homolog protein 5) (Protein SET
           DOMAIN GR
          Length = 794

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 11/36 (30%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
 Frame = +1

Query: 289 MFVAACLRRGMCRRVPPRACFGWSGCA----CSCLV 384
           ++ A  +    CR +PP++C   +GC+    C+C+V
Sbjct: 568 IYTAKMIYPDWCRPIPPKSCGCTNGCSKSKNCACIV 603

>PCQAP_HUMAN (Q96RN5) Positive cofactor 2 glutamine/Q-rich-associated protein|
           (PC2 glutamine/Q-rich-associated protein) (TPA-inducible
           gene 1 protein) (TIG-1) (Activator-recruited cofactor
           105 kDa component) (ARC105) (CTG repeat protein 7a)
          Length = 788

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
 Frame = -1

Query: 448 AGLPLAKL-LARVAQLSSTLLEEPSKNKHIQTIRSMP 341
           + +PL +  +A+V+Q S  +L  PS  + +QT +SMP
Sbjct: 413 SSIPLGRQPMAQVSQSSLPMLSSPSPGQQVQTPQSMP 449


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,542,987
Number of Sequences: 219361
Number of extensions: 1449526
Number of successful extensions: 4394
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4394
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2677159704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)