>gb|AY110006.1| Zea mays CL38736_1 mRNA sequence
          Length = 1286

 Score =  101 bits (51), Expect = 2e-18
 Identities = 93/107 (86%)
 Strand = Plus / Plus

                                                                       
Query: 287 tcatgtttgtggcggcatgtttgcgtagaggaatgtgtagaagagtcccacctcgggcat 346
           |||||||| ||| |||||||||||||| |||||||||||||||||| |||| || |||||
Sbjct: 517 tcatgtttctggtggcatgtttgcgtacaggaatgtgtagaagagttccacttcaggcat 576

                                                          
Query: 347 gcttcggatggtctggatgtgcttgttcttgcttggttcctcgagca 393
            |||| |||| |||||||||  ||||||||| |||| ||||| ||||
Sbjct: 577 acttctgatgatctggatgtatttgttcttgtttggctcctcaagca 623

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 90/105 (85%)
 Strand = Plus / Minus

                                                                           
Query: 289     atgtttgtggcggcatgtttgcgtagaggaatgtgtagaagagtcccacctcgggcatgc 348
               |||||| ||| |||||||||||||||||||| ||||| |||||| |||| || ||||| |
Sbjct: 8535356 atgtttctggtggcatgtttgcgtagaggaaagtgtaaaagagttccacttcaggcatac 8535297

                                                            
Query: 349     ttcggatggtctggatgtgcttgttcttgcttggttcctcgagca 393
               |||||||  |||| ||||||||||||||   ||| ||||||||||
Sbjct: 8535296 ttcggataatctgaatgtgcttgttcttatctggctcctcgagca 8535252

>dbj|AP005782.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBb0079G12
          Length = 139796

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 90/105 (85%)
 Strand = Plus / Minus

                                                                         
Query: 289   atgtttgtggcggcatgtttgcgtagaggaatgtgtagaagagtcccacctcgggcatgc 348
             |||||| ||| |||||||||||||||||||| ||||| |||||| |||| || ||||| |
Sbjct: 56566 atgtttctggtggcatgtttgcgtagaggaaagtgtaaaagagttccacttcaggcatac 56507

                                                          
Query: 349   ttcggatggtctggatgtgcttgttcttgcttggttcctcgagca 393
             |||||||  |||| ||||||||||||||   ||| ||||||||||
Sbjct: 56506 ttcggataatctgaatgtgcttgttcttatctggctcctcgagca 56462

>dbj|AK101689.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033059H01, full
            insert sequence
          Length = 1640

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 90/105 (85%)
 Strand = Plus / Minus

                                                                        
Query: 289  atgtttgtggcggcatgtttgcgtagaggaatgtgtagaagagtcccacctcgggcatgc 348
            |||||| ||| |||||||||||||||||||| ||||| |||||| |||| || ||||| |
Sbjct: 1237 atgtttctggtggcatgtttgcgtagaggaaagtgtaaaagagttccacttcaggcatac 1178

                                                         
Query: 349  ttcggatggtctggatgtgcttgttcttgcttggttcctcgagca 393
            |||||||  |||| ||||||||||||||   ||| ||||||||||
Sbjct: 1177 ttcggataatctgaatgtgcttgttcttatctggctcctcgagca 1133

>dbj|AK071933.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013084C05, full
            insert sequence
          Length = 1775

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 90/105 (85%)
 Strand = Plus / Minus

                                                                        
Query: 289  atgtttgtggcggcatgtttgcgtagaggaatgtgtagaagagtcccacctcgggcatgc 348
            |||||| ||| |||||||||||||||||||| ||||| |||||| |||| || ||||| |
Sbjct: 1395 atgtttctggtggcatgtttgcgtagaggaaagtgtaaaagagttccacttcaggcatac 1336

                                                         
Query: 349  ttcggatggtctggatgtgcttgttcttgcttggttcctcgagca 393
            |||||||  |||| ||||||||||||||   ||| ||||||||||
Sbjct: 1335 ttcggataatctgaatgtgcttgttcttatctggctcctcgagca 1291

>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 253     ggaagaaacatactcctttcc 273
               |||||||||||||||||||||
Sbjct: 4910930 ggaagaaacatactcctttcc 4910950

>gb|DQ141263.1| Pseudomonas syringae pv. phaseolicola strain NPS3121 phaseolotoxin
             synthesis gene cluster, complete sequence
          Length = 30245

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 253   ggaagaaacatactcctttcc 273
             |||||||||||||||||||||
Sbjct: 26871 ggaagaaacatactcctttcc 26851

>emb|BX927122.16| Zebrafish DNA sequence from clone DKEY-105I14 in linkage group 8,
             complete sequence
          Length = 173668

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 15    agattaaaaaagaacaagtat 35
             |||||||||||||||||||||
Sbjct: 74645 agattaaaaaagaacaagtat 74625

>gb|AC009411.2| Homo sapiens BAC clone RP11-342D1 from 2, complete sequence
          Length = 170804

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 39     acgaagaaccaagtaaaaatt 59
              |||||||||||||||||||||
Sbjct: 125885 acgaagaaccaagtaaaaatt 125865

>gb|AC090155.10| Homo sapiens chromosome 8, clone RP11-738G5, complete sequence
          Length = 192053

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 9      ctaactagattaaaaaagaac 29
              |||||||||||||||||||||
Sbjct: 149599 ctaactagattaaaaaagaac 149579

>dbj|AP000725.5| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-2O12, complete
             sequence
          Length = 108449

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 19    taaaaaagaacaagtatttca 39
             |||||||||||||||||||||
Sbjct: 28318 taaaaaagaacaagtatttca 28298

>gb|AC005371.1| Homo sapiens chromosome 5, BAC clone 342p15 (LBNL H189), complete
             sequence
          Length = 142600

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    aagaaccaagtaaaaattga 61
             ||||||||||||||||||||
Sbjct: 93159 aagaaccaagtaaaaattga 93178

>gb|AC115793.14| Mus musculus chromosome 9, clone RP23-400G18, complete sequence
          Length = 199109

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 45   aaccaagtaaaaattgaaagaact 68
            |||||||||||||| |||||||||
Sbjct: 3398 aaccaagtaaaaatagaaagaact 3421

>gb|AC164634.3| Mus musculus BAC clone RP23-64E16 from chromosome 17, complete sequence
          Length = 204253

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 390   agcagcgttgagctcagttgggct 413
             |||| |||||||||||||||||||
Sbjct: 23904 agcaacgttgagctcagttgggct 23927

>gb|AC084386.2| Mus musculus BAC clone RP23-61O2 from 17, complete sequence
          Length = 209523

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 390  agcagcgttgagctcagttgggct 413
            |||| |||||||||||||||||||
Sbjct: 3699 agcaacgttgagctcagttgggct 3676

>gb|AC012622.6| Homo sapiens chromosome 5 clone CTD-2072F21, complete sequence
          Length = 168237

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     ctaactagattaaaaaagaa 28
             ||||||||||||||||||||
Sbjct: 28298 ctaactagattaaaaaagaa 28317

>gb|AC093303.2| Homo sapiens chromosome 5 clone RP11-61K20, complete sequence
          Length = 163590

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 9     ctaactagattaaaaaagaa 28
             ||||||||||||||||||||
Sbjct: 60707 ctaactagattaaaaaagaa 60688

>gb|AC155160.4| Mus musculus BAC clone RP24-510B6 from chromosome 17, complete sequence
          Length = 208376

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 390    agcagcgttgagctcagttgggct 413
              |||| |||||||||||||||||||
Sbjct: 181106 agcaacgttgagctcagttgggct 181129

>gb|AC007564.10| Homo sapiens 12 BAC RP11-513P18 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 194397

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 49     aagtaaaaattgaaagaact 68
              ||||||||||||||||||||
Sbjct: 166843 aagtaaaaattgaaagaact 166824

>gb|AC084660.1|CBRG46N08 Caenorhabditis briggsae cosmid G46N08, complete sequence
          Length = 37436

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    aaccaagtaaaaattgaaag 64
             ||||||||||||||||||||
Sbjct: 14886 aaccaagtaaaaattgaaag 14905

>gb|AC010349.7|AC010349 Homo sapiens chromosome 5 clone CTD-2020O7, complete sequence
          Length = 165967

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 9     ctaactagattaaaaaagaa 28
             ||||||||||||||||||||
Sbjct: 21665 ctaactagattaaaaaagaa 21646

>gb|AC007221.2|AC007221 Homo sapiens chromosome 16 clone RPCI-11_418I22, complete sequence
          Length = 230696

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    aaagaactcttgtttcctga 80
             ||||||||||||||||||||
Sbjct: 30340 aaagaactcttgtttcctga 30359

>gb|AC154609.2| Mus musculus BAC clone RP23-334N13 from 16, complete sequence
          Length = 202556

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 28     acaagtatttcacgaagaaccaag 51
              |||||||||||| |||||||||||
Sbjct: 149985 acaagtatttcaggaagaaccaag 149962

>emb|AL929417.11| Mouse DNA sequence from clone RP23-25M5 on chromosome 2, complete
              sequence
          Length = 215389

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 109    atatacaggacacaaactca 128
              ||||||||||||||||||||
Sbjct: 121838 atatacaggacacaaactca 121819

>emb|AJ130944.1|LMI130944 Locusta migratoria mRNA for apolipophorin precursor protein
          Length = 10776

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 313  agaggaatgtgtagaagagt 332
            ||||||||||||||||||||
Sbjct: 7295 agaggaatgtgtagaagagt 7276


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,660,943
Number of Sequences: 3902068
Number of extensions: 4660943
Number of successful extensions: 85709
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85621
Number of HSP's gapped (non-prelim): 88
length of query: 448
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 426
effective length of database: 17,147,199,772
effective search space: 7304707102872
effective search space used: 7304707102872
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)