ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbasd16o19 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_466502.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3112 Score = 256 bits (129), Expect = 9e-65 Identities = 243/281 (86%) Strand = Plus / Minus Query: 225 agagctcacgatcttcacttgtccttcttctccctggcgatgaggtccatcacagctcgt 284 ||||| ||||||||||||| ||| ||||||||||| |||||||||||||||||||| || Sbjct: 2804 agagcacacgatcttcactggtctttcttctccctagcgatgaggtccatcacagcccgc 2745 Query: 285 ttgatgcttcctccattcttggcaagcagctccttgttcgtctccctgtcatcaaatccc 344 |||||||||||||| ||||| | |||| ||||||||| |||| |||| ||||| ||| Sbjct: 2744 ttgatgcttcctccgttcttctcgagcatctccttgtttatctcagtgtcctcaaagccc 2685 Query: 345 atttcgctcagttccgccagcagagggtcccattcattgacaccacacagatcatccacc 404 ||||| || ||| |||| |||||||||||||| |||| ||||| |||||||| || Sbjct: 2684 atttcctgcaactcctccaggagagggtcccattcgctgacgccacagagatcatcgaca 2625 Query: 405 gactgctccaggttgtacttattctgcctcagtatctccttgttcagatcaacctgctta 464 |||||||||||||||||||| |||||||| |||||||||||||||||||| |||||| || Sbjct: 2624 gactgctccaggttgtacttgttctgcctgagtatctccttgttcagatcgacctgccta 2565 Query: 465 aagcccatttcctccagctcctgcagcagtttctcttctgt 505 || ||||||||||| || |||| |||||||||||||||||| Sbjct: 2564 aaacccatttcctcaagttccttcagcagtttctcttctgt 2524
>ref|XM_506848.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0016G10.28-1 mRNA Length = 3152 Score = 256 bits (129), Expect = 9e-65 Identities = 243/281 (86%) Strand = Plus / Minus Query: 225 agagctcacgatcttcacttgtccttcttctccctggcgatgaggtccatcacagctcgt 284 ||||| ||||||||||||| ||| ||||||||||| |||||||||||||||||||| || Sbjct: 2844 agagcacacgatcttcactggtctttcttctccctagcgatgaggtccatcacagcccgc 2785 Query: 285 ttgatgcttcctccattcttggcaagcagctccttgttcgtctccctgtcatcaaatccc 344 |||||||||||||| ||||| | |||| ||||||||| |||| |||| ||||| ||| Sbjct: 2784 ttgatgcttcctccgttcttctcgagcatctccttgtttatctcagtgtcctcaaagccc 2725 Query: 345 atttcgctcagttccgccagcagagggtcccattcattgacaccacacagatcatccacc 404 ||||| || ||| |||| |||||||||||||| |||| ||||| |||||||| || Sbjct: 2724 atttcctgcaactcctccaggagagggtcccattcgctgacgccacagagatcatcgaca 2665 Query: 405 gactgctccaggttgtacttattctgcctcagtatctccttgttcagatcaacctgctta 464 |||||||||||||||||||| |||||||| |||||||||||||||||||| |||||| || Sbjct: 2664 gactgctccaggttgtacttgttctgcctgagtatctccttgttcagatcgacctgccta 2605 Query: 465 aagcccatttcctccagctcctgcagcagtttctcttctgt 505 || ||||||||||| || |||| |||||||||||||||||| Sbjct: 2604 aaacccatttcctcaagttccttcagcagtttctcttctgt 2564
>dbj|AK099686.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072E12, full insert sequence Length = 3112 Score = 256 bits (129), Expect = 9e-65 Identities = 243/281 (86%) Strand = Plus / Minus Query: 225 agagctcacgatcttcacttgtccttcttctccctggcgatgaggtccatcacagctcgt 284 ||||| ||||||||||||| ||| ||||||||||| |||||||||||||||||||| || Sbjct: 2804 agagcacacgatcttcactggtctttcttctccctagcgatgaggtccatcacagcccgc 2745 Query: 285 ttgatgcttcctccattcttggcaagcagctccttgttcgtctccctgtcatcaaatccc 344 |||||||||||||| ||||| | |||| ||||||||| |||| |||| ||||| ||| Sbjct: 2744 ttgatgcttcctccgttcttctcgagcatctccttgtttatctcagtgtcctcaaagccc 2685 Query: 345 atttcgctcagttccgccagcagagggtcccattcattgacaccacacagatcatccacc 404 ||||| || ||| |||| |||||||||||||| |||| ||||| |||||||| || Sbjct: 2684 atttcctgcaactcctccaggagagggtcccattcgctgacgccacagagatcatcgaca 2625 Query: 405 gactgctccaggttgtacttattctgcctcagtatctccttgttcagatcaacctgctta 464 |||||||||||||||||||| |||||||| |||||||||||||||||||| |||||| || Sbjct: 2624 gactgctccaggttgtacttgttctgcctgagtatctccttgttcagatcgacctgccta 2565 Query: 465 aagcccatttcctccagctcctgcagcagtttctcttctgt 505 || ||||||||||| || |||| |||||||||||||||||| Sbjct: 2564 aaacccatttcctcaagttccttcagcagtttctcttctgt 2524
>dbj|AK072838.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141P19, full insert sequence Length = 3149 Score = 256 bits (129), Expect = 9e-65 Identities = 243/281 (86%) Strand = Plus / Minus Query: 225 agagctcacgatcttcacttgtccttcttctccctggcgatgaggtccatcacagctcgt 284 ||||| ||||||||||||| ||| ||||||||||| |||||||||||||||||||| || Sbjct: 2841 agagcacacgatcttcactggtctttcttctccctagcgatgaggtccatcacagcccgc 2782 Query: 285 ttgatgcttcctccattcttggcaagcagctccttgttcgtctccctgtcatcaaatccc 344 |||||||||||||| ||||| | |||| ||||||||| |||| |||| ||||| ||| Sbjct: 2781 ttgatgcttcctccgttcttctcgagcatctccttgtttatctcagtgtcctcaaagccc 2722 Query: 345 atttcgctcagttccgccagcagagggtcccattcattgacaccacacagatcatccacc 404 ||||| || ||| |||| |||||||||||||| |||| ||||| |||||||| || Sbjct: 2721 atttcctgcaactcctccaggagagggtcccattcgctgacgccacagagatcatcgaca 2662 Query: 405 gactgctccaggttgtacttattctgcctcagtatctccttgttcagatcaacctgctta 464 |||||||||||||||||||| |||||||| |||||||||||||||||||| |||||| || Sbjct: 2661 gactgctccaggttgtacttgttctgcctgagtatctccttgttcagatcgacctgccta 2602 Query: 465 aagcccatttcctccagctcctgcagcagtttctcttctgt 505 || ||||||||||| || |||| |||||||||||||||||| Sbjct: 2601 aaacccatttcctcaagttccttcagcagtttctcttctgt 2561
>dbj|AK060817.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-A04, full insert sequence Length = 1619 Score = 256 bits (129), Expect = 9e-65 Identities = 243/281 (86%) Strand = Plus / Minus Query: 225 agagctcacgatcttcacttgtccttcttctccctggcgatgaggtccatcacagctcgt 284 ||||| ||||||||||||| ||| ||||||||||| |||||||||||||||||||| || Sbjct: 1306 agagcacacgatcttcactggtctttcttctccctagcgatgaggtccatcacagcccgc 1247 Query: 285 ttgatgcttcctccattcttggcaagcagctccttgttcgtctccctgtcatcaaatccc 344 |||||||||||||| ||||| | |||| ||||||||| |||| |||| ||||| ||| Sbjct: 1246 ttgatgcttcctccgttcttctcgagcatctccttgtttatctcagtgtcctcaaagccc 1187 Query: 345 atttcgctcagttccgccagcagagggtcccattcattgacaccacacagatcatccacc 404 ||||| || ||| |||| |||||||||||||| |||| ||||| |||||||| || Sbjct: 1186 atttcctgcaactcctccaggagagggtcccattcgctgacgccacagagatcatcgaca 1127 Query: 405 gactgctccaggttgtacttattctgcctcagtatctccttgttcagatcaacctgctta 464 |||||||||||||||||||| |||||||| |||||||||||||||||||| |||||| || Sbjct: 1126 gactgctccaggttgtacttgttctgcctgagtatctccttgttcagatcgacctgccta 1067 Query: 465 aagcccatttcctccagctcctgcagcagtttctcttctgt 505 || ||||||||||| || |||| |||||||||||||||||| Sbjct: 1066 aaacccatttcctcaagttccttcagcagtttctcttctgt 1026
>dbj|AK071429.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023095L03, full insert sequence Length = 2010 Score = 248 bits (125), Expect = 2e-62 Identities = 242/281 (86%) Strand = Plus / Minus Query: 225 agagctcacgatcttcacttgtccttcttctccctggcgatgaggtccatcacagctcgt 284 ||||| ||||||||||||| ||| ||||||||||| |||||||||||||||||||| || Sbjct: 1702 agagcacacgatcttcactggtctttcttctccctagcgatgaggtccatcacagcccgc 1643 Query: 285 ttgatgcttcctccattcttggcaagcagctccttgttcgtctccctgtcatcaaatccc 344 |||||||||||||| ||||| | |||| ||||||||| |||| |||| ||||| ||| Sbjct: 1642 ttgatgcttcctccgttcttctcgagcatctccttgtttatctcagtgtcctcaaagccc 1583 Query: 345 atttcgctcagttccgccagcagagggtcccattcattgacaccacacagatcatccacc 404 ||| | || ||| |||| |||||||||||||| |||| ||||| |||||||| || Sbjct: 1582 attccctgcaactcctccaggagagggtcccattcgctgacgccacagagatcatcgaca 1523 Query: 405 gactgctccaggttgtacttattctgcctcagtatctccttgttcagatcaacctgctta 464 |||||||||||||||||||| |||||||| |||||||||||||||||||| |||||| || Sbjct: 1522 gactgctccaggttgtacttgttctgcctgagtatctccttgttcagatcgacctgccta 1463 Query: 465 aagcccatttcctccagctcctgcagcagtttctcttctgt 505 || ||||||||||| || |||| |||||||||||||||||| Sbjct: 1462 aaacccatttcctcaagttccttcagcagtttctcttctgt 1422
>gb|AY108354.1| Zea mays PCO112404 mRNA sequence Length = 2108 Score = 244 bits (123), Expect = 3e-61 Identities = 222/255 (87%) Strand = Plus / Minus Query: 231 cacgatcttcacttgtccttcttctccctggcgatgaggtccatcacagctcgtttgatg 290 |||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||| Sbjct: 1737 cacgatcttcacttgtccttcttctccctggcaatgagctccatcacagctcgcttgatg 1678 Query: 291 cttcctccattcttggcaagcagctccttgttcgtctccctgtcatcaaatcccatttcg 350 ||||| ||||||| |||||||||||||||||| |||| |||||||||||||||| || Sbjct: 1677 cttccctcattcttcgcaagcagctccttgttcatctctgtgtcatcaaatcccatctct 1618 Query: 351 ctcagttccgccagcagagggtcccattcattgacaccacacagatcatccaccgactgc 410 ||| || || || ||||| |||||||||||||| ||||| || ||||| || |||||| Sbjct: 1617 tccagctctgcaaggagaggatcccattcattgacgccacataggtcatcgacagactgc 1558 Query: 411 tccaggttgtacttattctgcctcagtatctccttgttcagatcaacctgcttaaagccc 470 ||||| ||||| || |||||||| || || |||||||| ||||| |||||| |||| ||| Sbjct: 1557 tccagattgtaattgttctgcctgaggatttccttgttgagatcgacctgcctaaaaccc 1498 Query: 471 atttcctccagctcc 485 ||||||||||||||| Sbjct: 1497 atttcctccagctcc 1483
>emb|AJ575228.1|OSA575228 Oryza sativa (japonica cultivar-group) partial mRNA for TA4 protein Length = 627 Score = 236 bits (119), Expect = 8e-59 Identities = 230/267 (86%) Strand = Plus / Minus Query: 239 tcacttgtccttcttctccctggcgatgaggtccatcacagctcgtttgatgcttcctcc 298 ||||| ||| ||||||||||| |||||||||||||||||||| || |||||||||||||| Sbjct: 627 tcactggtctttcttctccctagcgatgaggtccatcacagcccgcttgatgcttcctcc 568 Query: 299 attcttggcaagcagctccttgttcgtctccctgtcatcaaatcccatttcgctcagttc 358 ||||| | |||| ||||||||| |||| |||| ||||| |||||||| || || Sbjct: 567 gttcttctcgagcatctccttgtttatctcagtgtcctcaaagcccatttcctgcaactc 508 Query: 359 cgccagcagagggtcccattcattgacaccacacagatcatccaccgactgctccaggtt 418 | |||| |||||||||||||| |||| ||||| |||||||| || |||||||||||||| Sbjct: 507 ctccaggagagggtcccattcgctgacgccacagagatcatcgacagactgctccaggtt 448 Query: 419 gtacttattctgcctcagtatctccttgttcagatcaacctgcttaaagcccatttcctc 478 |||||| |||||||| |||||||||||||||||||| |||||| |||| ||||||||||| Sbjct: 447 gtacttgttctgcctgagtatctccttgttcagatcgacctgcctaaaacccatttcctc 388 Query: 479 cagctcctgcagcagtttctcttctgt 505 || |||| |||||||||||||||||| Sbjct: 387 aagttccttcagcagtttctcttctgt 361
>gb|AY596599.1| Saccharum officinarum clone SCEPLR1008G04, complete sequence Length = 3065 Score = 228 bits (115), Expect = 2e-56 Identities = 220/255 (86%) Strand = Plus / Minus Query: 231 cacgatcttcacttgtccttcttctccctggcgatgaggtccatcacagctcgtttgatg 290 |||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||| Sbjct: 2754 cacgatcttcacttgtcctttttctccctggcaatgaggtccatcacagctcgcttgatg 2695 Query: 291 cttcctccattcttggcaagcagctccttgttcgtctccctgtcatcaaatcccatttcg 350 ||||| |||||||| |||||||||||||||||| ||| |||||||||||||||| || Sbjct: 2694 cttcccccattcttcgcaagcagctccttgttcacctctgtgtcatcaaatcccatctct 2635 Query: 351 ctcagttccgccagcagagggtcccattcattgacaccacacagatcatccaccgactgc 410 ||| || || || || || |||||||||||||||||||| || ||||| || |||||| Sbjct: 2634 tccagctctgcaaggagtggatcccattcattgacaccacataggtcatcaacagactgc 2575 Query: 411 tccaggttgtacttattctgcctcagtatctccttgttcagatcaacctgcttaaagccc 470 || |||||||| || ||||| || || || |||||||| ||||| | |||| |||| ||| Sbjct: 2574 tcgaggttgtaattgttctgtctaaggatttccttgttgagatcgatctgcctaaaaccc 2515 Query: 471 atttcctccagctcc 485 ||||||||||||||| Sbjct: 2514 atttcctccagctcc 2500
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 168 bits (85), Expect = 2e-38 Identities = 130/145 (89%) Strand = Plus / Plus Query: 361 ccagcagagggtcccattcattgacaccacacagatcatccaccgactgctccaggttgt 420 |||| |||||||||||||| |||| ||||| |||||||| || |||||||||||||||| Sbjct: 23001800 ccaggagagggtcccattcgctgacgccacagagatcatcgacagactgctccaggttgt 23001859 Query: 421 acttattctgcctcagtatctccttgttcagatcaacctgcttaaagcccatttcctcca 480 |||| |||||||| |||||||||||||||||||| |||||| |||| ||||||||||| | Sbjct: 23001860 acttgttctgcctgagtatctccttgttcagatcgacctgcctaaaacccatttcctcaa 23001919 Query: 481 gctcctgcagcagtttctcttctgt 505 | |||| |||||||||||||||||| Sbjct: 23001920 gttccttcagcagtttctcttctgt 23001944 Score = 107 bits (54), Expect = 5e-20 Identities = 87/98 (88%) Strand = Plus / Plus Query: 225 agagctcacgatcttcacttgtccttcttctccctggcgatgaggtccatcacagctcgt 284 ||||| ||||||||||||| ||| ||||||||||| |||||||||||||||||||| || Sbjct: 23001565 agagcacacgatcttcactggtctttcttctccctagcgatgaggtccatcacagcccgc 23001624 Query: 285 ttgatgcttcctccattcttggcaagcagctccttgtt 322 |||||||||||||| ||||| | |||| ||||||||| Sbjct: 23001625 ttgatgcttcctccgttcttctcgagcatctccttgtt 23001662
>dbj|AP004079.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1067_B01 Length = 100525 Score = 168 bits (85), Expect = 2e-38 Identities = 130/145 (89%) Strand = Plus / Plus Query: 361 ccagcagagggtcccattcattgacaccacacagatcatccaccgactgctccaggttgt 420 |||| |||||||||||||| |||| ||||| |||||||| || |||||||||||||||| Sbjct: 26197 ccaggagagggtcccattcgctgacgccacagagatcatcgacagactgctccaggttgt 26256 Query: 421 acttattctgcctcagtatctccttgttcagatcaacctgcttaaagcccatttcctcca 480 |||| |||||||| |||||||||||||||||||| |||||| |||| ||||||||||| | Sbjct: 26257 acttgttctgcctgagtatctccttgttcagatcgacctgcctaaaacccatttcctcaa 26316 Query: 481 gctcctgcagcagtttctcttctgt 505 | |||| |||||||||||||||||| Sbjct: 26317 gttccttcagcagtttctcttctgt 26341 Score = 107 bits (54), Expect = 5e-20 Identities = 87/98 (88%) Strand = Plus / Plus Query: 225 agagctcacgatcttcacttgtccttcttctccctggcgatgaggtccatcacagctcgt 284 ||||| ||||||||||||| ||| ||||||||||| |||||||||||||||||||| || Sbjct: 25962 agagcacacgatcttcactggtctttcttctccctagcgatgaggtccatcacagcccgc 26021 Query: 285 ttgatgcttcctccattcttggcaagcagctccttgtt 322 |||||||||||||| ||||| | |||| ||||||||| Sbjct: 26022 ttgatgcttcctccgttcttctcgagcatctccttgtt 26059
>dbj|AP005874.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0016G10 Length = 143211 Score = 168 bits (85), Expect = 2e-38 Identities = 130/145 (89%) Strand = Plus / Plus Query: 361 ccagcagagggtcccattcattgacaccacacagatcatccaccgactgctccaggttgt 420 |||| |||||||||||||| |||| ||||| |||||||| || |||||||||||||||| Sbjct: 121602 ccaggagagggtcccattcgctgacgccacagagatcatcgacagactgctccaggttgt 121661 Query: 421 acttattctgcctcagtatctccttgttcagatcaacctgcttaaagcccatttcctcca 480 |||| |||||||| |||||||||||||||||||| |||||| |||| ||||||||||| | Sbjct: 121662 acttgttctgcctgagtatctccttgttcagatcgacctgcctaaaacccatttcctcaa 121721 Query: 481 gctcctgcagcagtttctcttctgt 505 | |||| |||||||||||||||||| Sbjct: 121722 gttccttcagcagtttctcttctgt 121746 Score = 107 bits (54), Expect = 5e-20 Identities = 87/98 (88%) Strand = Plus / Plus Query: 225 agagctcacgatcttcacttgtccttcttctccctggcgatgaggtccatcacagctcgt 284 ||||| ||||||||||||| ||| ||||||||||| |||||||||||||||||||| || Sbjct: 121367 agagcacacgatcttcactggtctttcttctccctagcgatgaggtccatcacagcccgc 121426 Query: 285 ttgatgcttcctccattcttggcaagcagctccttgtt 322 |||||||||||||| ||||| | |||| ||||||||| Sbjct: 121427 ttgatgcttcctccgttcttctcgagcatctccttgtt 121464
>gb|AY098509.1| Ananas comosus PFE18 protein mRNA, partial cds Length = 1174 Score = 65.9 bits (33), Expect = 2e-07 Identities = 78/93 (83%) Strand = Plus / Minus Query: 400 ccaccgactgctccaggttgtacttattctgcctcagtatctccttgttcagatcaacct 459 |||| ||||| ||||||| |||||| |||||||| || | ||||||||||| || | || Sbjct: 770 ccacggactggtccaggtcgtacttgttctgcctgaggacctccttgttcaagtcgatct 711 Query: 460 gcttaaagcccatttcctccagctcctgcagca 492 |||| |||||||| ||||||| ||||| ||||| Sbjct: 710 gcttgaagcccatctcctccaactccttcagca 678 Score = 44.1 bits (22), Expect = 0.61 Identities = 70/86 (81%) Strand = Plus / Minus Query: 249 ttcttctccctggcgatgaggtccatcacagctcgtttgatgcttcctccattcttggca 308 ||||||||| ||||| |||||||||||| || || |||||||| || || ||||| | Sbjct: 921 ttcttctcctcggcgacgaggtccatcacggcgcgcttgatgctcccgccgttcttctcc 862 Query: 309 agcagctccttgttcgtctccctgtc 334 |||| || ||||||| ||||| |||| Sbjct: 861 agcatcttcttgttcctctccttgtc 836
>ref|NM_118602.3| Arabidopsis thaliana zinc ion binding AT4G24690 mRNA, complete cds Length = 2604 Score = 63.9 bits (32), Expect = 7e-07 Identities = 83/100 (83%) Strand = Plus / Minus Query: 387 ccacacagatcatccaccgactgctccaggttgtacttattctgcctcagtatctccttg 446 ||||| ||| |||| || ||||||||||||||||||| || | ||||| ||||||||| Sbjct: 2128 ccacaaagagcatcaacagactgctccaggttgtactcgttatccctcaagatctccttg 2069 Query: 447 ttcagatcaacctgcttaaagcccatttcctccagctcct 486 |||| ||| | || ||| || ||||||||||| ||||||| Sbjct: 2068 ttcaaatctatctccttgaaacccatttcctcgagctcct 2029
>emb|AL161562.2|ATCHRIV62 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 62 Length = 197070 Score = 63.9 bits (32), Expect = 7e-07 Identities = 83/100 (83%) Strand = Plus / Minus Query: 387 ccacacagatcatccaccgactgctccaggttgtacttattctgcctcagtatctccttg 446 ||||| ||| |||| || ||||||||||||||||||| || | ||||| ||||||||| Sbjct: 18285 ccacaaagagcatcaacagactgctccaggttgtactcgttatccctcaagatctccttg 18226 Query: 447 ttcagatcaacctgcttaaagcccatttcctccagctcct 486 |||| ||| | || ||| || ||||||||||| ||||||| Sbjct: 18225 ttcaaatctatctccttgaaacccatttcctcgagctcct 18186
>emb|AL035356.1|ATF22K18 Arabidopsis thaliana DNA chromosome 4, BAC clone F22K18 (ESSAII project) Length = 125803 Score = 63.9 bits (32), Expect = 7e-07 Identities = 83/100 (83%) Strand = Plus / Plus Query: 387 ccacacagatcatccaccgactgctccaggttgtacttattctgcctcagtatctccttg 446 ||||| ||| |||| || ||||||||||||||||||| || | ||||| ||||||||| Sbjct: 37223 ccacaaagagcatcaacagactgctccaggttgtactcgttatccctcaagatctccttg 37282 Query: 447 ttcagatcaacctgcttaaagcccatttcctccagctcct 486 |||| ||| | || ||| || ||||||||||| ||||||| Sbjct: 37283 ttcaaatctatctccttgaaacccatttcctcgagctcct 37322
>gb|BT008425.1| Arabidopsis thaliana At4g24690 gene, complete cds Length = 2115 Score = 63.9 bits (32), Expect = 7e-07 Identities = 83/100 (83%) Strand = Plus / Minus Query: 387 ccacacagatcatccaccgactgctccaggttgtacttattctgcctcagtatctccttg 446 ||||| ||| |||| || ||||||||||||||||||| || | ||||| ||||||||| Sbjct: 1970 ccacaaagagcatcaacagactgctccaggttgtactcgttatccctcaagatctccttg 1911 Query: 447 ttcagatcaacctgcttaaagcccatttcctccagctcct 486 |||| ||| | || ||| || ||||||||||| ||||||| Sbjct: 1910 ttcaaatctatctccttgaaacccatttcctcgagctcct 1871
>gb|AY140081.1| Arabidopsis thaliana unknown protein mRNA, complete cds Length = 2438 Score = 63.9 bits (32), Expect = 7e-07 Identities = 83/100 (83%) Strand = Plus / Minus Query: 387 ccacacagatcatccaccgactgctccaggttgtacttattctgcctcagtatctccttg 446 ||||| ||| |||| || ||||||||||||||||||| || | ||||| ||||||||| Sbjct: 2105 ccacaaagagcatcaacagactgctccaggttgtactcgttatccctcaagatctccttg 2046 Query: 447 ttcagatcaacctgcttaaagcccatttcctccagctcct 486 |||| ||| | || ||| || ||||||||||| ||||||| Sbjct: 2045 ttcaaatctatctccttgaaacccatttcctcgagctcct 2006
>gb|AY128759.1| Arabidopsis thaliana putative protein (At4g24690) mRNA, complete cds Length = 2144 Score = 63.9 bits (32), Expect = 7e-07 Identities = 83/100 (83%) Strand = Plus / Minus Query: 387 ccacacagatcatccaccgactgctccaggttgtacttattctgcctcagtatctccttg 446 ||||| ||| |||| || ||||||||||||||||||| || | ||||| ||||||||| Sbjct: 1970 ccacaaagagcatcaacagactgctccaggttgtactcgttatccctcaagatctccttg 1911 Query: 447 ttcagatcaacctgcttaaagcccatttcctccagctcct 486 |||| ||| | || ||| || ||||||||||| ||||||| Sbjct: 1910 ttcaaatctatctccttgaaacccatttcctcgagctcct 1871
>gb|AY062827.1| Arabidopsis thaliana putative protein (At4g24690; F22K18.110) mRNA, complete cds Length = 2283 Score = 63.9 bits (32), Expect = 7e-07 Identities = 83/100 (83%) Strand = Plus / Minus Query: 387 ccacacagatcatccaccgactgctccaggttgtacttattctgcctcagtatctccttg 446 ||||| ||| |||| || ||||||||||||||||||| || | ||||| ||||||||| Sbjct: 2048 ccacaaagagcatcaacagactgctccaggttgtactcgttatccctcaagatctccttg 1989 Query: 447 ttcagatcaacctgcttaaagcccatttcctccagctcct 486 |||| ||| | || ||| || ||||||||||| ||||||| Sbjct: 1988 ttcaaatctatctccttgaaacccatttcctcgagctcct 1949
>dbj|AK221082.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL22-80-O10 Length = 498 Score = 63.9 bits (32), Expect = 7e-07 Identities = 83/100 (83%) Strand = Plus / Minus Query: 387 ccacacagatcatccaccgactgctccaggttgtacttattctgcctcagtatctccttg 446 ||||| ||| |||| || ||||||||||||||||||| || | ||||| ||||||||| Sbjct: 131 ccacaaagagcatcaacagactgctccaggttgtactcgttatccctcaagatctccttg 72 Query: 447 ttcagatcaacctgcttaaagcccatttcctccagctcct 486 |||| ||| | || ||| || ||||||||||| ||||||| Sbjct: 71 ttcaaatctatctccttgaaacccatttcctcgagctcct 32
>emb|BX829102.1|CNS0A2MP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL70ZC02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 791 Score = 63.9 bits (32), Expect = 7e-07 Identities = 83/100 (83%) Strand = Plus / Minus Query: 387 ccacacagatcatccaccgactgctccaggttgtacttattctgcctcagtatctccttg 446 ||||| ||| |||| || ||||||||||||||||||| || | ||||| ||||||||| Sbjct: 441 ccacaaagagcatcaacagactgctccaggttgtactcgttatccctcaagatctccttg 382 Query: 447 ttcagatcaacctgcttaaagcccatttcctccagctcct 486 |||| ||| | || ||| || ||||||||||| ||||||| Sbjct: 381 ttcaaatctatctccttgaaacccatttcctcgagctcct 342
>emb|BX828775.1|CNS0A2PY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL37ZF05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1469 Score = 63.9 bits (32), Expect = 7e-07 Identities = 83/100 (83%) Strand = Plus / Minus Query: 387 ccacacagatcatccaccgactgctccaggttgtacttattctgcctcagtatctccttg 446 ||||| ||| |||| || ||||||||||||||||||| || | ||||| ||||||||| Sbjct: 1177 ccacaaagagcatcaacagactgctccaggttgtactcgttatccctcaagatctccttg 1118 Query: 447 ttcagatcaacctgcttaaagcccatttcctccagctcct 486 |||| ||| | || ||| || ||||||||||| ||||||| Sbjct: 1117 ttcaaatctatctccttgaaacccatttcctcgagctcct 1078
>ref|XM_472873.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2646 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Minus Query: 405 gactgctccaggttgtacttattctgcctcagtatctccttgttcag 451 ||||||||||||||||||| ||| |||| | ||| ||||||||||| Sbjct: 2576 gactgctccaggttgtactcgttccgcctaattatttccttgttcag 2530
>emb|AL606595.4|OSJN00035 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0044K18, complete sequence Length = 176615 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Plus Query: 405 gactgctccaggttgtacttattctgcctcagtatctccttgttcag 451 ||||||||||||||||||| ||| |||| | ||| ||||||||||| Sbjct: 8268 gactgctccaggttgtactcgttccgcctaattatttccttgttcag 8314
>emb|AJ575229.1|OSA575229 Oryza sativa (japonica cultivar-group) partial mRNA for TA5 protein Length = 155 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Minus Query: 405 gactgctccaggttgtacttattctgcctcagtatctccttgttcag 451 ||||||||||||||||||| ||| |||| | ||| ||||||||||| Sbjct: 85 gactgctccaggttgtactcgttccgcctaattatttccttgttcag 39
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Plus Query: 405 gactgctccaggttgtacttattctgcctcagtatctccttgttcag 451 ||||||||||||||||||| ||| |||| | ||| ||||||||||| Sbjct: 23843395 gactgctccaggttgtactcgttccgcctaattatttccttgttcag 23843441
>dbj|AK070908.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064I21, full insert sequence Length = 3123 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Minus Query: 405 gactgctccaggttgtacttattctgcctcagtatctccttgttcag 451 ||||||||||||||||||| ||| |||| | ||| ||||||||||| Sbjct: 2708 gactgctccaggttgtactcgttccgcctaattatttccttgttcag 2662
>gb|BC033575.1| Mus musculus PRP39 pre-mRNA processing factor 39 homolog (yeast), mRNA (cDNA clone IMAGE:5323073) Length = 4960 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 183 tatttaggcatatataaatagatata 208 |||||| ||||||||||||||||||| Sbjct: 2526 tatttatgcatatataaatagatata 2501
>gb|AC126262.4| Mus musculus BAC clone RP23-359F12 from chromosome 12, complete sequence Length = 208710 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 481 gctcctgcagcagtttctcttc 502 |||||||||||||||||||||| Sbjct: 95711 gctcctgcagcagtttctcttc 95732
>emb|AL732314.18| Human DNA sequence from clone RP13-465B17 on chromosome X Contains the 5' end of the gene for protein phosphatase 2A 48 kDa regulatory subunit (PR48), a fatty acid binding protein 5 (psoriasis-associated) (FABP5) pseudogene, a pseudogene similar to part of keratin 18 (KRT18) and nine CpG islands, complete sequence Length = 218723 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 196 ataaatagatatagataaatag 217 |||||||||||||||||||||| Sbjct: 123275 ataaatagatatagataaatag 123254
>emb|BX927402.13| Zebrafish DNA sequence from clone CH211-262G12 in linkage group 10, complete sequence Length = 155963 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Plus Query: 192 atatataaatagatatagataaatag 217 ||||||||||||||||||||| |||| Sbjct: 117986 atatataaatagatatagatagatag 118011
>gb|AC034299.8| Homo sapiens chromosome 18, clone RP11-500P9, complete sequence Length = 130795 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Plus Query: 191 catatataaatagatatagataaata 216 |||||||| ||||||||||||||||| Sbjct: 75865 catatatatatagatatagataaata 75890
>gb|AC091647.4| Homo sapiens chromosome 18, clone RP11-635D8, complete sequence Length = 173368 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 192 atatataaatagatatagataaatag 217 ||||| |||||||||||||||||||| Sbjct: 172723 atataaaaatagatatagataaatag 172698
>gb|AC021486.10| Homo sapiens chromosome , clone RP11-73I6, complete sequence Length = 144356 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Plus Query: 192 atatataaatagatatagataaatag 217 ||||| |||||||||||||||||||| Sbjct: 132362 atataaaaatagatatagataaatag 132387
>gb|AC159621.2| Mus musculus BAC clone RP24-342I9 from chromosome 12, complete sequence Length = 178350 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Plus Query: 183 tatttaggcatatataaatagatata 208 |||||| ||||||||||||||||||| Sbjct: 110039 tatttatgcatatataaatagatata 110064
>dbj|AK034600.1| Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430013F24 product:unclassifiable, full insert sequence Length = 2770 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 183 tatttaggcatatataaatagatata 208 |||||| ||||||||||||||||||| Sbjct: 909 tatttatgcatatataaatagatata 884
>emb|BX088538.25| Zebrafish DNA sequence from clone DKEY-69C19 in linkage group 4, complete sequence Length = 213700 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 196 ataaatagatatagataaatag 217 |||||||||||||||||||||| Sbjct: 210671 ataaatagatatagataaatag 210692
>gb|AC019239.5|AC019239 Homo sapiens chromosome 18, clone RP11-346H17, complete sequence Length = 165591 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 192 atatataaatagatatagataaatag 217 ||||| |||||||||||||||||||| Sbjct: 143295 atataaaaatagatatagataaatag 143270
>gb|AC120381.13| Mus musculus chromosome 5, clone RP24-266G11, complete sequence Length = 166871 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 196 ataaatagatatagataaatag 217 |||||||||||||||||||||| Sbjct: 26907 ataaatagatatagataaatag 26886
>emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ia Length = 1923819 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 192 atatataaatagatatagataaatag 217 ||||||| |||||||||||||||||| Sbjct: 310245 atatatatatagatatagataaatag 310220
>emb|CR385053.17| Zebrafish DNA sequence from clone DKEY-273G18 in linkage group 20, complete sequence Length = 163087 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 196 ataaatagatatagataaatag 217 |||||||||||||||||||||| Sbjct: 45511 ataaatagatatagataaatag 45532
>gb|AC109255.10| Mus musculus chromosome 16, clone RP23-359P19, complete sequence Length = 206967 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 196 ataaatagatatagataaatag 217 |||||||||||||||||||||| Sbjct: 132657 ataaatagatatagataaatag 132636
>gb|AC119899.8| Mus musculus chromosome 5, clone RP24-235E5, complete sequence Length = 210751 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 192 atatataaatagatatagata 212 ||||||||||||||||||||| Sbjct: 191586 atatataaatagatatagata 191606
>gb|AC160456.8| Mus musculus chromosome 8, clone RP23-121F17, complete sequence Length = 221841 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 194 atataaatagatatagataaa 214 ||||||||||||||||||||| Sbjct: 21872 atataaatagatatagataaa 21892
>gb|AC103632.8| Mus musculus chromosome 1, clone RP24-555D5, complete sequence Length = 177269 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 192 atatataaatagatatagata 212 ||||||||||||||||||||| Sbjct: 25107 atatataaatagatatagata 25127
>gb|AC144460.31| Mus musculus strain C57BL/6J clone rp23-109m13, complete sequence Length = 212991 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 196 ataaatagatatagataaata 216 ||||||||||||||||||||| Sbjct: 37517 ataaatagatatagataaata 37537
>ref|XM_617751.2| PREDICTED: Bos taurus similar to Spectrin beta chain, brain 3 (Spectrin, non-erythroid beta chain 3) (Beta-IV spectrin) (LOC537578), mRNA Length = 8264 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 473 ttcctccagctcctgcagcag 493 ||||||||||||||||||||| Sbjct: 2121 ttcctccagctcctgcagcag 2101
>gb|AC113158.3| Mus musculus BAC clone RP23-101D11 from chromosome 9, complete sequence Length = 188085 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 666 ggcacaaaaccagctgcattt 686 ||||||||||||||||||||| Sbjct: 33281 ggcacaaaaccagctgcattt 33261
>ref|NM_181403.2| Mus musculus vacuolar protein sorting 37C (yeast) (Vps37c), mRNA Length = 2415 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 470 catttcctccagctcctgcag 490 ||||||||||||||||||||| Sbjct: 216 catttcctccagctcctgcag 196
>gb|AC163991.3| Mus musculus chromosome 15, clone RP24-119L11, complete sequence Length = 152173 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 atatataaatagatatagata 212 ||||||||||||||||||||| Sbjct: 80277 atatataaatagatatagata 80257
>gb|BC025865.1| Mus musculus vacuolar protein sorting 37C (yeast), mRNA (cDNA clone MGC:32338 IMAGE:5029143), complete cds Length = 2415 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 470 catttcctccagctcctgcag 490 ||||||||||||||||||||| Sbjct: 216 catttcctccagctcctgcag 196
>gb|AC123551.5| Mus musculus BAC clone RP24-330P10 from chromosome 1, complete sequence Length = 167597 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 atatataaatagatatagata 212 ||||||||||||||||||||| Sbjct: 73517 atatataaatagatatagata 73497
>gb|AC003986.2| Homo sapiens BAC clone CTA-370M10 from 7, complete sequence Length = 188205 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 192 atatataaatagatatagataaata 216 ||||||||||||||||| ||||||| Sbjct: 83172 atatataaatagatatatataaata 83196
>gb|AC100590.9| Mus musculus chromosome 10, clone RP23-156N5, complete sequence Length = 195389 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 459 tgcttaaagcccatttcctcc 479 ||||||||||||||||||||| Sbjct: 108290 tgcttaaagcccatttcctcc 108310
>gb|AC109611.24| Mus musculus strain C57BL/6J clone rp23-342n8 map 5, complete sequence Length = 198992 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 187 taggcatatataaatagatatagat 211 |||||||||||| |||||||||||| Sbjct: 78342 taggcatatatagatagatatagat 78318
>gb|AC119206.13| Mus musculus chromosome 5, clone RP24-189M4, complete sequence Length = 168721 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 192 atatataaatagatatagata 212 ||||||||||||||||||||| Sbjct: 45542 atatataaatagatatagata 45562
>emb|AL929354.1|PFA929354 Plasmodium falciparum strain 3D7, chromosome 5, segment 4/4 Length = 340552 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 192 atatataaatagatatagata 212 ||||||||||||||||||||| Sbjct: 140568 atatataaatagatatagata 140588
>emb|BX649520.20| Zebrafish DNA sequence from clone DKEY-174E3 in linkage group 13, complete sequence Length = 219709 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 192 atatataaatagatatagataaata 216 ||||||||||||||||| ||||||| Sbjct: 189457 atatataaatagatataaataaata 189481
>gb|AC018559.31| Mus musculus strain 129/Sv chromosome 6 clone ct7-596k8, complete sequence Length = 111775 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 196 ataaatagatatagataaata 216 ||||||||||||||||||||| Sbjct: 5695 ataaatagatatagataaata 5675
>emb|BX323592.7| Zebrafish DNA sequence from clone CH211-213I23 in linkage group 14, complete sequence Length = 120180 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 192 atatataaatagatatagata 212 ||||||||||||||||||||| Sbjct: 92845 atatataaatagatatagata 92865
>gb|AC108934.4| Homo sapiens BAC clone RP11-469K17 from 4, complete sequence Length = 47217 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 192 atatataaatagatatagataaata 216 ||||||||||| ||||||||||||| Sbjct: 42213 atatataaatatatatagataaata 42189 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 192 atatataaatagatatagataaat 215 ||||||||||| |||||||||||| Sbjct: 42189 atatataaatatatatagataaat 42166
>gb|AC009562.9| Homo sapiens chromosome 15, clone RP11-348B17, complete sequence Length = 221475 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 196 ataaatagatatagataaata 216 ||||||||||||||||||||| Sbjct: 41124 ataaatagatatagataaata 41144
>dbj|AK159309.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420015H07 product:hypothetical Modifier of rudimentary (Mod/Proline-rich region profile containing protein, full insert sequence Length = 2695 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 470 catttcctccagctcctgcag 490 ||||||||||||||||||||| Sbjct: 289 catttcctccagctcctgcag 269
>dbj|AK150606.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830012K22 product:hypothetical Modifier of rudimentary (Mod/Proline-rich region profile containing protein, full insert sequence Length = 2604 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 470 catttcctccagctcctgcag 490 ||||||||||||||||||||| Sbjct: 268 catttcctccagctcctgcag 248
>dbj|AK165826.1| Mus musculus adult male accessory axillary lymph node cDNA, RIKEN full-length enriched library, clone:G630098N11 product:hypothetical protein, full insert sequence Length = 2690 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 470 catttcctccagctcctgcag 490 ||||||||||||||||||||| Sbjct: 268 catttcctccagctcctgcag 248
>dbj|AK158833.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K430340K13 product:hypothetical Proline-rich region profile containing protein, full insert sequence Length = 2355 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 470 catttcctccagctcctgcag 490 ||||||||||||||||||||| Sbjct: 127 catttcctccagctcctgcag 107
>emb|BX537264.9| Zebrafish DNA sequence from clone CH211-1C4 in linkage group 5, complete sequence Length = 160220 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 470 catttcctccagctcctgcag 490 ||||||||||||||||||||| Sbjct: 68482 catttcctccagctcctgcag 68462
>emb|BX537155.6| Mouse DNA sequence from clone RP24-118I4 on chromosome 2, complete sequence Length = 52020 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 192 atatataaatagatatagata 212 ||||||||||||||||||||| Sbjct: 43696 atatataaatagatatagata 43716
>gb|AC160338.2| Mus musculus BAC clone RP23-261O3 from chromosome 9, complete sequence Length = 167569 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 192 atatataaatagatatagata 212 ||||||||||||||||||||| Sbjct: 135672 atatataaatagatatagata 135692
>dbj|AK030717.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730409F24 product:weakly similar to LD39545P [Drosophila melanogaster], full insert sequence Length = 2492 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 470 catttcctccagctcctgcag 490 ||||||||||||||||||||| Sbjct: 86 catttcctccagctcctgcag 66
>gb|AC155720.7| Mus musculus 6 BAC RP24-151P23 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 210211 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 196 ataaatagatatagataaata 216 ||||||||||||||||||||| Sbjct: 154817 ataaatagatatagataaata 154797
>emb|BX296527.6| Zebrafish DNA sequence from clone DKEYP-32C3 in linkage group 2, complete sequence Length = 185706 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 197 taaatagatatagataaatag 217 ||||||||||||||||||||| Sbjct: 792 taaatagatatagataaatag 812
>gb|AC096725.3| Homo sapiens BAC clone RP11-25L5 from 4, complete sequence Length = 182627 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 atatataaatagatatagata 212 ||||||||||||||||||||| Sbjct: 70415 atatataaatagatatagata 70395
>ref|XM_217901.3| PREDICTED: Rattus norvegicus similar to RIKEN cDNA 5730409F24 (predicted) (LOC308178), mRNA Length = 1095 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 470 catttcctccagctcctgcag 490 ||||||||||||||||||||| Sbjct: 78 catttcctccagctcctgcag 58
>emb|BX004974.21| Zebrafish DNA sequence from clone CH211-74A16 in linkage group 18, complete sequence Length = 186303 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 192 atatataaatagatatagataaata 216 ||||||||||| ||||||||||||| Sbjct: 167926 atatataaataaatatagataaata 167902
>gb|AC009424.2|AC009424 Homo sapiens, clone RP11-45E1, complete sequence Length = 139438 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 192 atatataaatagatatagataaata 216 ||||| ||||||||||||||||||| Sbjct: 115362 atataaaaatagatatagataaata 115338
>emb|BX649330.5| Zebrafish DNA sequence from clone CH211-140F21 in linkage group 22, complete sequence Length = 163964 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 192 atatataaatagatatagataaata 216 ||||||||||||||||| ||||||| Sbjct: 48592 atatataaatagatatatataaata 48568
>emb|AL928960.25| Mouse DNA sequence from clone RP23-413K16 on chromosome 2, complete sequence Length = 195733 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 192 atatataaatagatatagata 212 ||||||||||||||||||||| Sbjct: 41606 atatataaatagatatagata 41626
>dbj|AP006545.1| Homo sapiens genomic DNA, chromosome 8p11.21, clone: KB1836B05, complete sequence Length = 156888 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 192 atatataaatagatatagataaata 216 ||||||||||||||||| ||||||| Sbjct: 114775 atatataaatagatatatataaata 114799
>gb|AC116725.13| Mus musculus chromosome 8, clone RP23-272P20, complete sequence Length = 201130 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 194 atataaatagatatagataaa 214 ||||||||||||||||||||| Sbjct: 7980 atataaatagatatagataaa 7960
>gb|AC109163.16| Mus musculus chromosome 8, clone RP24-174F12, complete sequence Length = 189849 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 196 ataaatagatatagataaata 216 ||||||||||||||||||||| Sbjct: 88331 ataaatagatatagataaata 88311
>emb|BX248384.10| Zebrafish DNA sequence from clone CH211-233C3 in linkage group 8, complete sequence Length = 155293 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 182 ttatttaggcatatataaatagata 206 |||||||||||||||| |||||||| Sbjct: 46776 ttatttaggcatatattaatagata 46800
>emb|BX927101.19| Zebrafish DNA sequence from clone CH211-120F16 in linkage group 2, complete sequence Length = 162145 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 197 taaatagatatagataaatag 217 ||||||||||||||||||||| Sbjct: 107371 taaatagatatagataaatag 107351
>dbj|AP003470.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1460A12 Length = 157679 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 192 atatataaatagatatagataaata 216 ||||| ||||||||||||||||||| Sbjct: 5599 atataaaaatagatatagataaata 5623
>dbj|AP002846.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1084C9 Length = 176998 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 192 atatataaatagatatagataaata 216 ||||| ||||||||||||||||||| Sbjct: 42667 atataaaaatagatatagataaata 42691
>emb|CT486006.6| Mouse DNA sequence from clone RP23-433C10 on chromosome 9, complete sequence Length = 208668 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 192 atatataaatagatatagata 212 ||||||||||||||||||||| Sbjct: 9659 atatataaatagatatagata 9679
>emb|AL831712.12| Mouse DNA sequence from clone RP23-118A20 on chromosome 4, complete sequence Length = 210976 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 196 ataaatagatatagataaata 216 ||||||||||||||||||||| Sbjct: 154060 ataaatagatatagataaata 154080
>gb|AC132247.3| Mus musculus BAC clone RP24-424J1 from 19, complete sequence Length = 187078 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 470 catttcctccagctcctgcag 490 ||||||||||||||||||||| Sbjct: 68770 catttcctccagctcctgcag 68790
>dbj|AP007290.1| Lotus japonicus genomic DNA, clone:LjT20H21, TM0319, complete sequence Length = 64598 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 196 ataaatagatatagataaata 216 ||||||||||||||||||||| Sbjct: 45590 ataaatagatatagataaata 45610
>emb|AL672055.8| Mouse DNA sequence from clone RP23-339K2 on chromosome X, complete sequence Length = 232188 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 470 catttcctccagctcctgcag 490 ||||||||||||||||||||| Sbjct: 186900 catttcctccagctcctgcag 186880
>emb|AL671759.10| Mouse DNA sequence from clone RP23-151A15 on chromosome 4, complete sequence Length = 141790 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 196 ataaatagatatagataaata 216 ||||||||||||||||||||| Sbjct: 63020 ataaatagatatagataaata 63040
>gb|AC102914.9| Mus musculus chromosome 15, clone RP24-274M4, complete sequence Length = 185807 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 atagatatagataaataggt 219 |||||||||||||||||||| Sbjct: 11358 atagatatagataaataggt 11377
>gb|AC122309.5| Mus musculus BAC clone RP23-293G2 from chromosome 14, complete sequence Length = 208443 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 192 atatataaatagatatagataaataggt 219 ||||||| ||||||||||||| |||||| Sbjct: 142634 atatatagatagatatagatagataggt 142661
>ref|XM_523786.1| PREDICTED: Pan troglodytes similar to myosin, heavy polypeptide 13, skeletal muscle; extraocular muscle myosin heavy chain (LOC468397), mRNA Length = 4962 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 470 catttcctccagctcctgcagcag 493 ||||||||||||||||| |||||| Sbjct: 3195 catttcctccagctcctccagcag 3172
>gb|AC158304.11| Mus musculus chromosome 7, clone RP24-192F23, complete sequence Length = 166451 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 474 tcctccagctcctgcagcag 493 |||||||||||||||||||| Sbjct: 163429 tcctccagctcctgcagcag 163410
>ref|NM_003802.1| Homo sapiens myosin, heavy polypeptide 13, skeletal muscle (MYH13), mRNA Length = 5992 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 470 catttcctccagctcctgcagcag 493 ||||||||||||||||| |||||| Sbjct: 5166 catttcctccagctcctccagcag 5143
>ref|NM_172927.1| Mus musculus RIKEN cDNA E330026B02 gene (E330026B02Rik), mRNA Length = 3955 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 666 ggcacaaaaccagctgcattttca 689 |||||||||||||| ||||||||| Sbjct: 275 ggcacaaaaccagcagcattttca 252
>gb|AC165970.3| Mus musculus BAC clone RP23-129J20 from chromosome 6, complete sequence Length = 207303 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 196 ataaatagatatagataaataggt 219 ||||||||||||||||| |||||| Sbjct: 16508 ataaatagatatagatagataggt 16531
>gb|AC158554.6| Mus musculus chromosome 15, clone RP23-353O17, complete sequence Length = 192019 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 atagatatagataaataggt 219 |||||||||||||||||||| Sbjct: 187883 atagatatagataaataggt 187902
>gb|AC016792.5| Drosophila melanogaster clone BACR26A02, complete sequence Length = 164971 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 atatataaatagatatagataaat 215 ||||||||||||||||||| |||| Sbjct: 10619 atatataaatagatatagacaaat 10642
>gb|AC119951.12| Mus musculus chromosome 9, clone RP24-448C4, complete sequence Length = 215131 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 666 ggcacaaaaccagctgcattttca 689 |||||||||||||| ||||||||| Sbjct: 69686 ggcacaaaaccagcagcattttca 69709
>gb|AC007928.7| Drosophila melanogaster clone BACR04O02, complete sequence Length = 176395 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 atatataaatagatatagataaat 215 ||||||||||||||||||| |||| Sbjct: 137202 atatataaatagatatagacaaat 137225
>gb|BC116447.1| Xenopus laevis cDNA clone MGC:130971 IMAGE:7975722, complete cds Length = 4924 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 192 atatataaatagatatagataaataggt 219 ||||||||||| ||||| |||||||||| Sbjct: 2669 atatataaatatatataaataaataggt 2642
>ref|NM_020971.1| Homo sapiens spectrin, beta, non-erythrocytic 4 (SPTBN4), transcript variant 1, mRNA Length = 8671 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 474 tcctccagctcctgcagcag 493 |||||||||||||||||||| Sbjct: 2050 tcctccagctcctgcagcag 2031
>ref|NM_025213.1| Homo sapiens spectrin, beta, non-erythrocytic 4 (SPTBN4), transcript variant 2, mRNA Length = 8788 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 474 tcctccagctcctgcagcag 493 |||||||||||||||||||| Sbjct: 2127 tcctccagctcctgcagcag 2108
>emb|CR387998.9| Zebrafish DNA sequence from clone DKEY-29H15 in linkage group 1, complete sequence Length = 128837 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 atatataaatagatatagat 211 |||||||||||||||||||| Sbjct: 2799 atatataaatagatatagat 2780
>gb|AF324063.1| Homo sapiens non-erythrocytic beta-spectrin 4 (SPNB4) mRNA, complete cds Length = 8671 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 474 tcctccagctcctgcagcag 493 |||||||||||||||||||| Sbjct: 2050 tcctccagctcctgcagcag 2031
>gb|AF324064.1| Homo sapiens beta spectrin IV mRNA, complete cds Length = 6200 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 474 tcctccagctcctgcagcag 493 |||||||||||||||||||| Sbjct: 2050 tcctccagctcctgcagcag 2031
>gb|AC123863.4| Mus musculus BAC clone RP23-364A19 from chromosome 5, complete sequence Length = 218179 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 ttaggcatatataaatagat 205 |||||||||||||||||||| Sbjct: 136844 ttaggcatatataaatagat 136863
>gb|AE014312.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 9 of 11 of the complete sequence Length = 250029 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 tatataaatagatatagata 212 |||||||||||||||||||| Sbjct: 128653 tatataaatagatatagata 128672
>gb|AC104594.2| Homo sapiens BAC clone RP13-620M21 from 7, complete sequence Length = 154665 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 tatataaatagatatagata 212 |||||||||||||||||||| Sbjct: 71638 tatataaatagatatagata 71657
>ref|XM_541613.2| PREDICTED: Canis familiaris similar to Spectrin beta chain, brain 3 (Spectrin, non-erythroid beta chain 3) (Beta-IV spectrin) (LOC484499), mRNA Length = 8696 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 474 tcctccagctcctgcagcag 493 |||||||||||||||||||| Sbjct: 2062 tcctccagctcctgcagcag 2043
>gb|AC163242.3| Callicebus moloch clone LB5-73P23, complete sequence Length = 101102 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 atataaatagatatagataa 213 |||||||||||||||||||| Sbjct: 12979 atataaatagatatagataa 12960
>emb|AL354803.24| Human DNA sequence from clone RP11-539I23 on chromosome 13 Contains the 5' end of a novel gene, complete sequence Length = 179380 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 aagtcacaccaacaagtctt 141 |||||||||||||||||||| Sbjct: 107913 aagtcacaccaacaagtctt 107932
>emb|AL162253.17| Human DNA sequence from clone RP11-574F11 on chromosome 9 Contains the gene for B7-H1 protein (PD-L1), the gene for programmed death ligand 2 (PDL2) (PDCD1L2) and a novel gene, complete sequence Length = 146327 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 494 tttctcttctgtaagtctgt 513 |||||||||||||||||||| Sbjct: 11469 tttctcttctgtaagtctgt 11450
>emb|AL138954.16| Human DNA sequence from clone RP11-100K21 on chromosome 13q33.1-33.3, complete sequence Length = 144152 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 tatataaatagatatagata 212 |||||||||||||||||||| Sbjct: 89938 tatataaatagatatagata 89957
>gb|AC133476.2| Homo sapiens 3 BAC RP11-73O12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 67388 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 cacttgtccttcttctccct 259 |||||||||||||||||||| Sbjct: 21235 cacttgtccttcttctccct 21216
>emb|Z12139.1|XLPARPG X.laevis PARP gene encoding poly(ADP-ribose) polymerase Length = 3617 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 474 tcctccagctcctgcagcag 493 |||||||||||||||||||| Sbjct: 255 tcctccagctcctgcagcag 236
>emb|AL603917.5| Mouse DNA sequence from clone RP23-107J13 on chromosome 11 Contains a novel gene, a glyoxalase 1 (Glo1) pseudogene and a pseudogene similar to part of nuclear pore membrane protein 121 Pom121, complete sequence Length = 212255 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 tatataaatagatatagata 212 |||||||||||||||||||| Sbjct: 132823 tatataaatagatatagata 132842
>gb|AC131053.2| Homo sapiens chromosome 18, clone RP11-348G23, complete sequence Length = 191115 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 196 ataaatagatatagataaataggt 219 ||||||||||||||||| |||||| Sbjct: 183586 ataaatagatatagatagataggt 183609
>gb|AC112656.4| Homo sapiens X BAC RP11-555H23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 142650 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 atagatatagataaataggt 219 |||||||||||||||||||| Sbjct: 16841 atagatatagataaataggt 16860
>gb|AC020929.6| Homo sapiens chromosome 19 clone CTD-2223D2, complete sequence Length = 119569 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 474 tcctccagctcctgcagcag 493 |||||||||||||||||||| Sbjct: 49228 tcctccagctcctgcagcag 49209
>gb|AC099848.2| Homo sapiens chromosome 18, clone RP11-856F24, complete sequence Length = 132288 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 196 ataaatagatatagataaataggt 219 ||||||||||||||||| |||||| Sbjct: 117672 ataaatagatatagatagataggt 117695
>gb|AY032702.1|Y032691S12 Mus musculus beta-spectrin 4 (Spnb4) gene, exon 14 Length = 1080 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 474 tcctccagctcctgcagcag 493 |||||||||||||||||||| Sbjct: 231 tcctccagctcctgcagcag 212
>gb|AC055840.10| Homo sapiens chromosome 18, clone RP11-645I23, complete sequence Length = 175293 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 196 ataaatagatatagataaataggt 219 ||||||||||||||||| |||||| Sbjct: 151725 ataaatagatatagatagataggt 151702
>gb|AC104940.2| Homo sapiens chromosome 8, clone RP11-378J9, complete sequence Length = 215962 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 192 atatataaatagatatagataaat 215 ||||||||||||||||| |||||| Sbjct: 93634 atatataaatagatatatataaat 93611
>gb|AC099756.2| Homo sapiens chromosome 1 clone RP11-180A14, complete sequence Length = 167302 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 192 atatataaatagatatagataaataggt 219 ||||||| ||||||||||||| |||||| Sbjct: 120115 atatatatatagatatagatagataggt 120142
>dbj|AK147558.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1078H14 product:spectrin beta 4, full insert sequence Length = 8747 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 474 tcctccagctcctgcagcag 493 |||||||||||||||||||| Sbjct: 2120 tcctccagctcctgcagcag 2101
>gb|AY032655.1| Mus musculus beta4-spectrin mRNA, complete cds Length = 8735 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 474 tcctccagctcctgcagcag 493 |||||||||||||||||||| Sbjct: 2114 tcctccagctcctgcagcag 2095
>gb|AC093559.2| Homo sapiens chromosome 1 clone RP11-138K16, complete sequence Length = 175909 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 atatataaatagatatagataaat 215 ||||||||||||||||| |||||| Sbjct: 116556 atatataaatagatatacataaat 116579
>gb|AC140242.5| Mus musculus BAC clone RP23-290N4 from chromosome 8, complete sequence Length = 168835 Score = 40.1 bits (20), Expect = 9.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 183 tatttaggcatatataaatagatatagataaatagg 218 |||||||||||||||| ||| ||||| ||| ||||| Sbjct: 148935 tatttaggcatatatatatatatatatatatatagg 148900
>gb|AC125145.3| Mus musculus BAC clone RP24-347B7 from chromosome 6, complete sequence Length = 186598 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 196 ataaatagatatagataaataggt 219 ||||||||||||||||| |||||| Sbjct: 72328 ataaatagatatagatagataggt 72351
>dbj|AK087828.1| Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN full-length enriched library, clone:E330026B02 product:hypothetical von Willebrand factor type A domain containing protein, full insert sequence Length = 4728 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 666 ggcacaaaaccagctgcattttca 689 |||||||||||||| ||||||||| Sbjct: 315 ggcacaaaaccagcagcattttca 292
>gb|AF311855.1|AF311855 Homo sapiens spectrin beta IV (SPTBN3) mRNA, complete cds, alternatively spliced Length = 8069 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 474 tcctccagctcctgcagcag 493 |||||||||||||||||||| Sbjct: 2066 tcctccagctcctgcagcag 2047
>dbj|AK054356.1| Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN full-length enriched library, clone:E330019B14 product:hypothetical von Willebrand factor type A domain containing protein, full insert sequence Length = 3955 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 666 ggcacaaaaccagctgcattttca 689 |||||||||||||| ||||||||| Sbjct: 275 ggcacaaaaccagcagcattttca 252
>gb|AC015522.6|AC015522 Homo sapiens chromosome 8, clone RP11-327O12, complete sequence Length = 147026 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 atatataaatagatatagataaat 215 ||||||||||||||||| |||||| Sbjct: 134338 atatataaatagatatatataaat 134361
>gb|AC158670.5| Mus musculus 6 BAC RP23-82N21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 227520 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 catatataaatagatataga 210 |||||||||||||||||||| Sbjct: 143963 catatataaatagatataga 143944
>gb|AC158654.3| Mus musculus 6 BAC RP24-375H22 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 190192 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 catatataaatagatataga 210 |||||||||||||||||||| Sbjct: 38534 catatataaatagatataga 38515
>gb|AC137741.5| Homo sapiens chromosome 8, clone CTD-2059D3, complete sequence Length = 117100 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ataggtcttccactcacaat 22 |||||||||||||||||||| Sbjct: 72113 ataggtcttccactcacaat 72094
>gb|AY004227.1| Homo sapiens betaIV spectrin isoform sigma4 mRNA, complete cds, alternatively spliced Length = 6636 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 474 tcctccagctcctgcagcag 493 |||||||||||||||||||| Sbjct: 1949 tcctccagctcctgcagcag 1930
>gb|AY004226.1| Homo sapiens betaIV spectrin isoform sigma2 and betaIV spectrin isoform sigma3 bicistronic mRNA, complete cds, alternatively spliced Length = 7766 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 474 tcctccagctcctgcagcag 493 |||||||||||||||||||| Sbjct: 1949 tcctccagctcctgcagcag 1930
>gb|AF082075.1|AF082075 Homo sapiens beta4sigma1 spectrin mRNA, complete cds Length = 8788 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 474 tcctccagctcctgcagcag 493 |||||||||||||||||||| Sbjct: 2127 tcctccagctcctgcagcag 2108
>ref|NM_032610.1| Mus musculus spectrin beta 4 (Spnb4), mRNA Length = 8740 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 474 tcctccagctcctgcagcag 493 |||||||||||||||||||| Sbjct: 2109 tcctccagctcctgcagcag 2090
>ref|XM_218364.3| PREDICTED: Rattus norvegicus spectrin beta 4 (predicted) (Spnb4_predicted), mRNA Length = 8741 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 474 tcctccagctcctgcagcag 493 |||||||||||||||||||| Sbjct: 2105 tcctccagctcctgcagcag 2086
>gb|AC069181.9| Homo sapiens chromosome 8, clone RP11-200A24, complete sequence Length = 139409 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 ataggtcttccactcacaat 22 |||||||||||||||||||| Sbjct: 128944 ataggtcttccactcacaat 128963
>gb|AF149207.1|AF149207S1 Homo sapiens extraocular myosin heavy chain (MYH13) gene, exon 35 Length = 204 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 470 catttcctccagctcctgcagcag 493 ||||||||||||||||| |||||| Sbjct: 111 catttcctccagctcctccagcag 88
>emb|BX649270.3| Sminthopsis DNA sequence from clone RZPD668-231M3, complete sequence Length = 51166 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 tatataaatagatatagata 212 |||||||||||||||||||| Sbjct: 43784 tatataaatagatatagata 43765
>gb|AC101702.11| Mus musculus chromosome 1, clone RP23-247G20, complete sequence Length = 178193 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 194 atataaatagatatagataaatag 217 ||||| |||||||||||||||||| Sbjct: 128466 atatatatagatatagataaatag 128443
>gb|AF111782.2|AF111782 Homo sapiens extraocular muscle myosin heavy chain mRNA, complete cds Length = 5992 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 470 catttcctccagctcctgcagcag 493 ||||||||||||||||| |||||| Sbjct: 5166 catttcctccagctcctccagcag 5143
>gb|AE003704.3| Drosophila melanogaster chromosome 3R, section 42 of 118 of the complete sequence Length = 220679 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 192 atatataaatagatatagataaat 215 ||||||||||||||||||| |||| Sbjct: 168501 atatataaatagatatagacaaat 168478
>dbj|AP006543.1| Homo sapiens genomic DNA, chromosome 8p12, clone: KB1250F11, complete sequence Length = 98657 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 ataggtcttccactcacaat 22 |||||||||||||||||||| Sbjct: 374 ataggtcttccactcacaat 393
>gb|AC174643.3| Mus musculus BAC clone RP24-235D23 from chromosome 8, complete sequence Length = 197695 Score = 40.1 bits (20), Expect = 9.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 183 tatttaggcatatataaatagatatagataaatagg 218 |||||||||||||||| ||| ||||| ||| ||||| Sbjct: 165207 tatttaggcatatatatatatatatatatatatagg 165172
>gb|BC110778.1| Xenopus laevis cDNA clone MGC:131214 IMAGE:7211661, complete cds Length = 3656 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 474 tcctccagctcctgcagcag 493 |||||||||||||||||||| Sbjct: 317 tcctccagctcctgcagcag 298
>dbj|AP006183.1| Homo sapiens genomic DNA, chromosome 8p12, clone: KB1169H7, complete sequence Length = 158699 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 ataggtcttccactcacaat 22 |||||||||||||||||||| Sbjct: 124219 ataggtcttccactcacaat 124238
>gb|AC005291.1|AC005291 Homo sapiens chromosome 17, clone hRPK.401_O_9, complete sequence Length = 198582 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 470 catttcctccagctcctgcagcag 493 ||||||||||||||||| |||||| Sbjct: 98313 catttcctccagctcctccagcag 98336
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 tccttcttctccctggcgat 265 |||||||||||||||||||| Sbjct: 4588352 tccttcttctccctggcgat 4588371
>gb|AC147371.4| Mus musculus BAC clone RP24-247D2 from 6, complete sequence Length = 178577 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 196 ataaatagatatagataaataggt 219 ||||||||||||||||| |||||| Sbjct: 64308 ataaatagatatagatagataggt 64331
>gb|AC139182.4| Mus musculus BAC clone RP24-125O22 from 8, complete sequence Length = 159792 Score = 40.1 bits (20), Expect = 9.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 183 tatttaggcatatataaatagatatagataaatagg 218 |||||||||||||||| ||| ||||| ||| ||||| Sbjct: 56585 tatttaggcatatatatatatatatatatatatagg 56550
>gb|DP000019.1| Callicebus moloch target 1 genomic scaffold Length = 2105003 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 atataaatagatatagataa 213 |||||||||||||||||||| Sbjct: 829233 atataaatagatatagataa 829214
>dbj|D14667.1|XELPADPRP Xenopus laevis mRNA for poly(ADP-ribose) polymerase Length = 3718 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 474 tcctccagctcctgcagcag 493 |||||||||||||||||||| Sbjct: 389 tcctccagctcctgcagcag 370
>gb|DQ147203.1| Zea mays subsp. parviglumis isolate p12 phospholipid transfer protein 1 (plt1) gene, complete cds Length = 714 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 399 tccaccgactgctccaggtt 418 |||||||||||||||||||| Sbjct: 328 tccaccgactgctccaggtt 347
>dbj|AB055618.1| Mus musculus mRNA for betaIV-spectrin sigma1, complete cds Length = 8740 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 474 tcctccagctcctgcagcag 493 |||||||||||||||||||| Sbjct: 2109 tcctccagctcctgcagcag 2090
>dbj|AB046862.1| Homo sapiens mRNA for KIAA1642 protein, partial cds Length = 5992 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 474 tcctccagctcctgcagcag 493 |||||||||||||||||||| Sbjct: 809 tcctccagctcctgcagcag 790 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,996,694 Number of Sequences: 3902068 Number of extensions: 5996694 Number of successful extensions: 131711 Number of sequences better than 10.0: 164 Number of HSP's better than 10.0 without gapping: 164 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 131132 Number of HSP's gapped (non-prelim): 564 length of query: 696 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 673 effective length of database: 17,143,297,704 effective search space: 11537439354792 effective search space used: 11537439354792 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
