>ref|XM_469921.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1369

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 112/132 (84%), Gaps = 3/132 (2%)
 Strand = Plus / Minus

                                                                        
Query: 270  gacgccgccatggactcaacatggtggatctgccgaggagcaggacgaagccaaggaacg 329
            |||| ||||| ||||||||||||||||||||| |||| ||||| | ||||||||||||||
Sbjct: 1051 gacgacgccagggactcaacatggtggatctgtcgagcagcagtaggaagccaaggaacg 992

                                                                        
Query: 330  tggttgacaagccgaacgtatacctggtagtagagcttc---ttctccaaaagattacgg 386
            | |||||||  ||||| ||||||||||  || || ||||   |||||||||||||||  |
Sbjct: 991  tagttgacagaccgaaggtatacctggctgtggaacttctgtttctccaaaagattatcg 932

                        
Query: 387  agagcaaccact 398
            |||||| |||||
Sbjct: 931  agagcacccact 920

>gb|AY224542.1| Oryza sativa (japonica cultivar-group) isolate 23484 heavy
            meromyosin-like protein mRNA, complete cds
          Length = 1071

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 112/132 (84%), Gaps = 3/132 (2%)
 Strand = Plus / Minus

                                                                        
Query: 270  gacgccgccatggactcaacatggtggatctgccgaggagcaggacgaagccaaggaacg 329
            |||| ||||| ||||||||||||||||||||| |||| ||||| | ||||||||||||||
Sbjct: 1051 gacgacgccagggactcaacatggtggatctgtcgagcagcagtaggaagccaaggaacg 992

                                                                        
Query: 330  tggttgacaagccgaacgtatacctggtagtagagcttc---ttctccaaaagattacgg 386
            | |||||||  ||||| ||||||||||  || || ||||   |||||||||||||||  |
Sbjct: 991  tagttgacagaccgaaggtatacctggctgtggaacttctgtttctccaaaagattatcg 932

                        
Query: 387  agagcaaccact 398
            |||||| |||||
Sbjct: 931  agagcacccact 920

>dbj|AK071787.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023110P10, full
            insert sequence
          Length = 1524

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 112/132 (84%), Gaps = 3/132 (2%)
 Strand = Plus / Minus

                                                                        
Query: 270  gacgccgccatggactcaacatggtggatctgccgaggagcaggacgaagccaaggaacg 329
            |||| ||||| ||||||||||||||||||||| |||| ||||| | ||||||||||||||
Sbjct: 1206 gacgacgccagggactcaacatggtggatctgtcgagcagcagtaggaagccaaggaacg 1147

                                                                        
Query: 330  tggttgacaagccgaacgtatacctggtagtagagcttc---ttctccaaaagattacgg 386
            | |||||||  ||||| ||||||||||  || || ||||   |||||||||||||||  |
Sbjct: 1146 tagttgacagaccgaaggtatacctggctgtggaacttctgtttctccaaaagattatcg 1087

                        
Query: 387  agagcaaccact 398
            |||||| |||||
Sbjct: 1086 agagcacccact 1075

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 76/86 (88%)
 Strand = Plus / Plus

                                                                            
Query: 270      gacgccgccatggactcaacatggtggatctgccgaggagcaggacgaagccaaggaacg 329
                |||| ||||| ||||||||||||||||||||| |||| ||||| | ||||||||||||||
Sbjct: 32496989 gacgacgccagggactcaacatggtggatctgtcgagcagcagtaggaagccaaggaacg 32497048

                                          
Query: 330      tggttgacaagccgaacgtatacctg 355
                | |||||||  ||||| |||||||||
Sbjct: 32497049 tagttgacagaccgaaggtatacctg 32497074



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 369      ttctccaaaagattacggagagcaaccactgc 400
                |||||||||||||||  ||||||| |||||||
Sbjct: 32497182 ttctccaaaagattatcgagagcacccactgc 32497213

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 76/86 (88%)
 Strand = Plus / Plus

                                                                            
Query: 270      gacgccgccatggactcaacatggtggatctgccgaggagcaggacgaagccaaggaacg 329
                |||| ||||| ||||||||||||||||||||| |||| ||||| | ||||||||||||||
Sbjct: 32587499 gacgacgccagggactcaacatggtggatctgtcgagcagcagtaggaagccaaggaacg 32587558

                                          
Query: 330      tggttgacaagccgaacgtatacctg 355
                | |||||||  ||||| |||||||||
Sbjct: 32587559 tagttgacagaccgaaggtatacctg 32587584



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 369      ttctccaaaagattacggagagcaaccactgc 400
                |||||||||||||||  ||||||| |||||||
Sbjct: 32587692 ttctccaaaagattatcgagagcacccactgc 32587723

>gb|AC087096.11| Oryza sativa chromosome 3 BAC OSJNBa0087O09 genomic sequence, complete
             sequence
          Length = 119134

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 76/86 (88%)
 Strand = Plus / Plus

                                                                         
Query: 270   gacgccgccatggactcaacatggtggatctgccgaggagcaggacgaagccaaggaacg 329
             |||| ||||| ||||||||||||||||||||| |||| ||||| | ||||||||||||||
Sbjct: 30438 gacgacgccagggactcaacatggtggatctgtcgagcagcagtaggaagccaaggaacg 30497

                                       
Query: 330   tggttgacaagccgaacgtatacctg 355
             | |||||||  ||||| |||||||||
Sbjct: 30498 tagttgacagaccgaaggtatacctg 30523



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 369   ttctccaaaagattacggagagcaaccactgc 400
             |||||||||||||||  ||||||| |||||||
Sbjct: 30631 ttctccaaaagattatcgagagcacccactgc 30662

>gb|AC159612.1| Zea mays chromosome 5S clone ZMMBBb0511I12 map bin: 5.00, complete
             sequence
          Length = 50000

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                         
Query: 270   gacgccgccatggactcaacatggtggatctgccgaggagcaggacgaagccaaggaacg 329
             |||||||||| ||||||||||  ||||||||| |||| ||||| | || |||||||||||
Sbjct: 13036 gacgccgccagggactcaacaacgtggatctgtcgagaagcagcaggaggccaaggaacg 13095

              
Query: 330   t 330
             |
Sbjct: 13096 t 13096



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                               
Query: 40    aagcctagcagtctcaataacacactatacagca 73
             |||||||| ||||| |||||||||||||||||||
Sbjct: 12817 aagcctagtagtctgaataacacactatacagca 12850

>gb|BC079168.1| Rattus norvegicus similar to RIKEN cDNA 2610301B20; EST AI428449,
            mRNA (cDNA clone MGC:94199 IMAGE:7129828), complete cds
          Length = 2044

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 408  atatcaaaagttgttagttttc 429
            ||||||||||||||||||||||
Sbjct: 1347 atatcaaaagttgttagttttc 1368

>ref|XM_460838.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0F11902g)
           partial mRNA
          Length = 2007

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 403 gaaagatatcaaaagttgttag 424
           ||||||||||||||||||||||
Sbjct: 292 gaaagatatcaaaagttgttag 313

>emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces
              hansenii
          Length = 2336804

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 403    gaaagatatcaaaagttgttag 424
              ||||||||||||||||||||||
Sbjct: 955004 gaaagatatcaaaagttgttag 955025

>ref|NM_001007746.1| Rattus norvegicus similar to RIKEN cDNA 2610301B20; EST AI428449
            (MGC94199), mRNA
          Length = 2044

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 408  atatcaaaagttgttagttttc 429
            ||||||||||||||||||||||
Sbjct: 1347 atatcaaaagttgttagttttc 1368

>ref|XM_865290.1| PREDICTED: Bos taurus similar to HBS1-like, transcript variant 2
           (LOC541083), mRNA
          Length = 2796

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 400 caggaaagatatcaaaagttgttag 424
           ||||||||||| |||||||||||||
Sbjct: 516 caggaaagatagcaaaagttgttag 540

>emb|CR753837.14| Zebrafish DNA sequence from clone DKEY-234K7 in linkage group 5,
             complete sequence
          Length = 135495

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 55    aataacacactatacagcaagctca 79
             |||||||||||||||| ||||||||
Sbjct: 10474 aataacacactatacatcaagctca 10498



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 55   aataacacactatacagcaagctca 79
            |||||||||||||||| ||||||||
Sbjct: 1382 aataacacactatacatcaagctca 1406

>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 259     tggccgatgcggacgccgccatgga 283
               |||||| ||||||||||||||||||
Sbjct: 3244489 tggccggtgcggacgccgccatgga 3244513

>emb|BX649559.12| Zebrafish DNA sequence from clone DKEY-33C3 in linkage group 3,
             complete sequence
          Length = 143056

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 55    aataacacactatacagcaagctca 79
             |||||||||||||||| ||||||||
Sbjct: 25552 aataacacactatacatcaagctca 25576

>gb|AC090872.1|AC090872 Drosophila melanogaster, chromosome 2L, region 36B-36C, BAC clone
            BACR06G19, complete sequence
          Length = 178481

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 305  aggagcaggacgaagccaagg 325
            |||||||||||||||||||||
Sbjct: 9394 aggagcaggacgaagccaagg 9374

>gb|AC009250.3|AC009250 Drosophila melanogaster, chromosome 2L, region 36B-36B, BAC clone
             BACR27M18, complete sequence
          Length = 170362

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 305   aggagcaggacgaagccaagg 325
             |||||||||||||||||||||
Sbjct: 19836 aggagcaggacgaagccaagg 19856

>gb|AE003653.3| Drosophila melanogaster chromosome 2L, section 62 of 83 of the complete
             sequence
          Length = 247634

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 305   aggagcaggacgaagccaagg 325
             |||||||||||||||||||||
Sbjct: 69524 aggagcaggacgaagccaagg 69504

>emb|BX255908.4| Zebrafish DNA sequence from clone CH211-250O16 in linkage group 5,
              complete sequence
          Length = 121726

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 55     aataacacactatacagcaagctca 79
              |||||||||||||||| ||||||||
Sbjct: 121108 aataacacactatacatcaagctca 121132

>gb|BT025489.1| Bos taurus zinc finger protein 36, C3H type-like 2 (ZFP36L2), mRNA,
            incomplete 3' cds
          Length = 1239

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 301  gccgaggagcaggacgaagc 320
            ||||||||||||||||||||
Sbjct: 1199 gccgaggagcaggacgaagc 1180

>emb|CR848788.7| Zebrafish DNA sequence from clone DKEY-283B15 in linkage group 16,
             complete sequence
          Length = 189441

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 522   aataaacaaatactccgtat 541
             ||||||||||||||||||||
Sbjct: 45674 aataaacaaatactccgtat 45655

>emb|AL592164.6| Human DNA sequence from clone RP13-126P21 on chromosome X Contains a
             ribosomal protein S11 (RPS11) pseudogene and a CpG island,
             complete sequence
          Length = 124687

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    caataacacactatacagca 73
             ||||||||||||||||||||
Sbjct: 59453 caataacacactatacagca 59472

>gb|CP000302.1| Shewanella denitrificans OS217, complete genome
          Length = 4545906

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 301     gccgaggagcaggacgaagc 320
               ||||||||||||||||||||
Sbjct: 1087684 gccgaggagcaggacgaagc 1087703

>emb|AL161800.10| Human DNA sequence from clone RP11-318C17 on chromosome 20 Contains the
             3' end fo the C20orf133 gene and the 3' end of a novel
             gene, complete sequence
          Length = 43741

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 545   ataatggtttccttttccaa 564
             ||||||||||||||||||||
Sbjct: 40170 ataatggtttccttttccaa 40189

>gb|AC121345.12| Homo sapiens X BAC RP11-121I12 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 109924

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 559   ttccaagttacagctccaaa 578
             ||||||||||||||||||||
Sbjct: 30169 ttccaagttacagctccaaa 30188

>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 256    ctgtggccgatgcggacgcc 275
              ||||||||||||||||||||
Sbjct: 353309 ctgtggccgatgcggacgcc 353290

>gb|AC007601.7| Homo sapiens chromosome 16 clone RP11-276H1, complete sequence
          Length = 161864

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 479   tggacatgaaaaattcagat 498
             ||||||||||||||||||||
Sbjct: 79223 tggacatgaaaaattcagat 79242

>gb|AC002364.1|AC002364 Homo sapiens Xp22 Cosmids U15E4, U115H5, U132E12, U115B9  (Lawrence
             Livermore human cosmid library) complete sequence
          Length = 120703

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 559   ttccaagttacagctccaaa 578
             ||||||||||||||||||||
Sbjct: 43901 ttccaagttacagctccaaa 43920

>gb|L77117.1| Methanocaldococcus jannaschii DSM 2661, complete genome
          Length = 1664970

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 404     aaagatatcaaaagttgtta 423
               ||||||||||||||||||||
Sbjct: 1184784 aaagatatcaaaagttgtta 1184803


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,546,317
Number of Sequences: 3902068
Number of extensions: 5546317
Number of successful extensions: 97138
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 96924
Number of HSP's gapped (non-prelim): 211
length of query: 625
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 602
effective length of database: 17,143,297,704
effective search space: 10320265217808
effective search space used: 10320265217808
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)