ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbasd17d09 |
|---|---|
| Clone Library Name | barley_pub |
>AMP2B_ARATH (Q56Y85) Methionine aminopeptidase 2B (EC 3.4.11.18) (MetAP 2B)| (MAP 2B) (Peptidase M 2B) Length = 439 Score = 193 bits (490), Expect = 3e-49 Identities = 88/100 (88%), Positives = 94/100 (94%) Frame = -2 Query: 515 ECSHYIKNFDVGHVPLRVAKAKQLLGTINNNFGTLAFCRRYLDRIGETKYLMALKNLCDV 336 ECSHY+KNFD GHVPLR+ +AKQLL TIN NF TLAFCRRYLDRIGETKYLMALKNLCD Sbjct: 340 ECSHYMKNFDAGHVPLRLPRAKQLLATINKNFSTLAFCRRYLDRIGETKYLMALKNLCDS 399 Query: 335 GIVQPYPPLCDVRGSYVSQFEHTILLRPTCKEVISRGDDY 216 GIVQPYPPLCDV+GSYVSQFEHTILLRPTCKEV+S+GDDY Sbjct: 400 GIVQPYPPLCDVKGSYVSQFEHTILLRPTCKEVLSKGDDY 439
>AMP2A_ARATH (Q9FV49) Methionine aminopeptidase 2A (EC 3.4.11.18) (MetAP 2A)| (MAP 2A) (Peptidase M 2A) Length = 441 Score = 186 bits (473), Expect = 3e-47 Identities = 82/100 (82%), Positives = 94/100 (94%) Frame = -2 Query: 515 ECSHYIKNFDVGHVPLRVAKAKQLLGTINNNFGTLAFCRRYLDRIGETKYLMALKNLCDV 336 ECSHY+KN+DVGHVPLR+ +AKQLL TIN NF TLAFCRRYLDR+GETKYLMALKNLCD Sbjct: 342 ECSHYMKNYDVGHVPLRLPRAKQLLATINKNFSTLAFCRRYLDRLGETKYLMALKNLCDS 401 Query: 335 GIVQPYPPLCDVRGSYVSQFEHTILLRPTCKEVISRGDDY 216 GI++P PP+CDV+GSY+SQFEHTILLRPTCKE+IS+GDDY Sbjct: 402 GIIEPCPPVCDVKGSYISQFEHTILLRPTCKEIISKGDDY 441
>AMPM2_RAT (P38062) Methionine aminopeptidase 2 (EC 3.4.11.18) (MetAP 2)| (Peptidase M 2) (Initiation factor 2-associated 67 kDa glycoprotein) (p67) (p67eIF2) Length = 478 Score = 184 bits (467), Expect = 1e-46 Identities = 80/100 (80%), Positives = 92/100 (92%) Frame = -2 Query: 515 ECSHYIKNFDVGHVPLRVAKAKQLLGTINNNFGTLAFCRRYLDRIGETKYLMALKNLCDV 336 ECSHY+KNFDVGHVP+R+ + K LL IN NFGTLAFCRR+LDR+GE+KYLMALKNLCD+ Sbjct: 379 ECSHYMKNFDVGHVPIRLPRTKHLLNVINENFGTLAFCRRWLDRLGESKYLMALKNLCDL 438 Query: 335 GIVQPYPPLCDVRGSYVSQFEHTILLRPTCKEVISRGDDY 216 GIV PYPPLCD++GSY +QFEHTILLRPTCKEV+SRGDDY Sbjct: 439 GIVDPYPPLCDIKGSYTAQFEHTILLRPTCKEVVSRGDDY 478
>AMPM2_MOUSE (O08663) Methionine aminopeptidase 2 (EC 3.4.11.18) (MetAP 2)| (Peptidase M 2) (Initiation factor 2-associated 67 kDa glycoprotein) (p67) (p67eIF2) Length = 478 Score = 184 bits (467), Expect = 1e-46 Identities = 80/100 (80%), Positives = 92/100 (92%) Frame = -2 Query: 515 ECSHYIKNFDVGHVPLRVAKAKQLLGTINNNFGTLAFCRRYLDRIGETKYLMALKNLCDV 336 ECSHY+KNFDVGHVP+R+ + K LL IN NFGTLAFCRR+LDR+GE+KYLMALKNLCD+ Sbjct: 379 ECSHYMKNFDVGHVPIRLPRTKHLLNVINENFGTLAFCRRWLDRLGESKYLMALKNLCDL 438 Query: 335 GIVQPYPPLCDVRGSYVSQFEHTILLRPTCKEVISRGDDY 216 GIV PYPPLCD++GSY +QFEHTILLRPTCKEV+SRGDDY Sbjct: 439 GIVDPYPPLCDIKGSYTAQFEHTILLRPTCKEVVSRGDDY 478
>AMPM2_HUMAN (P50579) Methionine aminopeptidase 2 (EC 3.4.11.18) (MetAP 2)| (Peptidase M 2) (Initiation factor 2-associated 67 kDa glycoprotein) (p67) (p67eIF2) Length = 478 Score = 184 bits (467), Expect = 1e-46 Identities = 80/100 (80%), Positives = 92/100 (92%) Frame = -2 Query: 515 ECSHYIKNFDVGHVPLRVAKAKQLLGTINNNFGTLAFCRRYLDRIGETKYLMALKNLCDV 336 ECSHY+KNFDVGHVP+R+ + K LL IN NFGTLAFCRR+LDR+GE+KYLMALKNLCD+ Sbjct: 379 ECSHYMKNFDVGHVPIRLPRTKHLLNVINENFGTLAFCRRWLDRLGESKYLMALKNLCDL 438 Query: 335 GIVQPYPPLCDVRGSYVSQFEHTILLRPTCKEVISRGDDY 216 GIV PYPPLCD++GSY +QFEHTILLRPTCKEV+SRGDDY Sbjct: 439 GIVDPYPPLCDIKGSYTAQFEHTILLRPTCKEVVSRGDDY 478
>AMPM2_YEAST (P38174) Methionine aminopeptidase 2 (EC 3.4.11.18) (MetAP 2)| (Peptidase M 2) Length = 421 Score = 119 bits (298), Expect = 5e-27 Identities = 59/100 (59%), Positives = 71/100 (71%) Frame = -2 Query: 515 ECSHYIKNFDVGHVPLRVAKAKQLLGTINNNFGTLAFCRRYLDRIGETKYLMALKNLCDV 336 E SHY ++ + V + AK LL TI+ NFGTL FCRRYLDR+G+ KYL AL NL Sbjct: 322 EVSHYARSAEDHQVMPTLDSAKNLLKTIDRNFGTLPFCRRYLDRLGQEKYLFALNNLVRH 381 Query: 335 GIVQPYPPLCDVRGSYVSQFEHTILLRPTCKEVISRGDDY 216 G+VQ YPPL D+ GSY +QFEHTILL KEV+S+GDDY Sbjct: 382 GLVQDYPPLNDIPGSYTAQFEHTILLHAHKKEVVSKGDDY 421
>YD43_CAEEL (P50581) Hypothetical protein T27A8.3 in chromosome X| Length = 182 Score = 70.1 bits (170), Expect = 3e-12 Identities = 34/58 (58%), Positives = 45/58 (77%), Gaps = 2/58 (3%) Frame = -2 Query: 515 ECSHYIKNFDVGH--VPLRVAKAKQLLGTINNNFGTLAFCRRYLDRIGETKYLMALKN 348 E SHY+KNF++ +PLR+ K+K LL I+ NF TLAFCR ++DR+ ETKYLMALK+ Sbjct: 94 ETSHYMKNFELADEKIPLRLQKSKGLLKLIDKNFATLAFCRCWIDRLEETKYLMALKD 151
>AMPM2_ENCIN (Q6XMH7) Methionine aminopeptidase 2 (EC 3.4.11.18) (MetAP 2)| (Peptidase M 2) (MetAP2) (MAP-2) Length = 358 Score = 69.3 bits (168), Expect = 6e-12 Identities = 39/98 (39%), Positives = 56/98 (57%), Gaps = 10/98 (10%) Frame = -2 Query: 479 HVPLRVAKAKQLLGT--------INNNFGTLAFCRRYLDRIG--ETKYLMALKNLCDVGI 330 H L V K+++L + ++FGTL F R+LD E L ++ L +G+ Sbjct: 261 HFMLNVHKSRKLFNKDLIKVYEFVKSSFGTLPFSPRHLDHYNLVEGGSLKSVNLLTMMGL 320 Query: 329 VQPYPPLCDVRGSYVSQFEHTILLRPTCKEVISRGDDY 216 PYPPL D+ GS V+QFEHT+ L KE+++RGDDY Sbjct: 321 FTPYPPLNDIDGSKVAQFEHTVYLSENGKEILTRGDDY 358
>AMPM2_ENCHE (Q6XMH6) Methionine aminopeptidase 2 (EC 3.4.11.18) (MetAP 2)| (Peptidase M 2) (MetAP2) (MAP-2) Length = 358 Score = 69.3 bits (168), Expect = 6e-12 Identities = 41/104 (39%), Positives = 60/104 (57%), Gaps = 5/104 (4%) Frame = -2 Query: 512 CSHYIKNFDVGHVPLRVAKAKQLLGT---INNNFGTLAFCRRYLD--RIGETKYLMALKN 348 CSH++ N R K L+ + ++FGTL F R+LD + E L ++ Sbjct: 259 CSHFMINTHKS----RKLYNKDLIKVYEFVRDSFGTLPFSPRHLDYYNLVEGSALKSVNL 314 Query: 347 LCDVGIVQPYPPLCDVRGSYVSQFEHTILLRPTCKEVISRGDDY 216 L +G+ PYPPL D+ GS V+QFEHT+ L + KE+++RGDDY Sbjct: 315 LTMMGLFTPYPPLNDIDGSKVAQFEHTVYLSESGKEILTRGDDY 358
>AMPM2_ENCCU (Q8SR45) Methionine aminopeptidase 2 (EC 3.4.11.18) (MetAP 2)| (Peptidase M 2) (MetAP2) (MAP-2) Length = 358 Score = 66.6 bits (161), Expect = 4e-11 Identities = 41/104 (39%), Positives = 58/104 (55%), Gaps = 5/104 (4%) Frame = -2 Query: 512 CSHYIKNFDVGHVPLRVAKAKQLLGT---INNNFGTLAFCRRYLDRIGETK--YLMALKN 348 CSH++ N R K L+ + ++ GTL F R+LD G K L ++ Sbjct: 259 CSHFVLNT----YKSRKLFNKDLIKVYEFVKDSLGTLPFSPRHLDYYGLVKGGSLKSVNL 314 Query: 347 LCDVGIVQPYPPLCDVRGSYVSQFEHTILLRPTCKEVISRGDDY 216 L +G++ PYPPL D+ G V+QFEHT+ L KEV++RGDDY Sbjct: 315 LTMMGLLTPYPPLNDIDGCKVAQFEHTVYLSEHGKEVLTRGDDY 358
>AMPM_PYRFU (P56218) Methionine aminopeptidase (EC 3.4.11.18) (MAP) (Peptidase| M) Length = 295 Score = 59.7 bits (143), Expect = 5e-09 Identities = 33/77 (42%), Positives = 47/77 (61%), Gaps = 1/77 (1%) Frame = -2 Query: 485 VGHVPLRVAKAKQLLGTINNNFGTLAFCRRYLDR-IGETKYLMALKNLCDVGIVQPYPPL 309 V VP+RVA+A+ LL I +GTL F R+L + E + +ALK L G + YP L Sbjct: 209 VRDVPVRVAQARFLLAKIKREYGTLPFAYRWLQNDMPEGQLKLALKTLEKAGAIYGYPVL 268 Query: 308 CDVRGSYVSQFEHTILL 258 ++R V+QFEHTI++ Sbjct: 269 KEIRNGIVAQFEHTIIV 285
>AMPM_PYRKO (Q5JGD1) Methionine aminopeptidase (EC 3.4.11.18) (MAP) (Peptidase| M) Length = 295 Score = 55.5 bits (132), Expect = 9e-08 Identities = 30/73 (41%), Positives = 46/73 (63%), Gaps = 1/73 (1%) Frame = -2 Query: 473 PLRVAKAKQLLGTINNNFGTLAFCRRYL-DRIGETKYLMALKNLCDVGIVQPYPPLCDVR 297 P+R+ +A++LL I N+ TL F R+L D + E + +AL L G + YP L +VR Sbjct: 214 PVRMLQARRLLMHIKKNYKTLPFAYRWLQDFLPEGQLKLALAQLEKAGAIYAYPILREVR 273 Query: 296 GSYVSQFEHTILL 258 G V+QFEHT+++ Sbjct: 274 GGMVAQFEHTVIV 286
>AMPM_PYRHO (O58362) Methionine aminopeptidase (EC 3.4.11.18) (MAP) (Peptidase| M) Length = 295 Score = 53.5 bits (127), Expect = 3e-07 Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 1/77 (1%) Frame = -2 Query: 485 VGHVPLRVAKAKQLLGTINNNFGTLAFCRRYLD-RIGETKYLMALKNLCDVGIVQPYPPL 309 V P+R+A+A+ LL I + TL F R+L + E + +AL++L G + YP L Sbjct: 209 VRDAPVRMAQARFLLAKIKREYKTLPFAYRWLQGEMPEGQLKLALRSLERSGALYGYPVL 268 Query: 308 CDVRGSYVSQFEHTILL 258 ++RG V+QFEHTI++ Sbjct: 269 REIRGGMVTQFEHTIIV 285
>AMPM_ARCFU (O28438) Methionine aminopeptidase (EC 3.4.11.18) (MAP) (Peptidase| M) Length = 291 Score = 50.4 bits (119), Expect = 3e-06 Identities = 23/72 (31%), Positives = 44/72 (61%) Frame = -2 Query: 473 PLRVAKAKQLLGTINNNFGTLAFCRRYLDRIGETKYLMALKNLCDVGIVQPYPPLCDVRG 294 P+R+ A+++L + N+ TL F +R+L + + + + L G+++ YP L +V G Sbjct: 214 PVRMKMAREILKEVEENYKTLPFAKRWLKKAPD----IIISKLAREGVLRAYPVLTEVSG 269 Query: 293 SYVSQFEHTILL 258 VSQ+EHT+++ Sbjct: 270 GLVSQWEHTLIV 281
>AMPM_PYRAB (Q9UYT4) Methionine aminopeptidase (EC 3.4.11.18) (MAP) (Peptidase| M) Length = 295 Score = 49.7 bits (117), Expect = 5e-06 Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 1/77 (1%) Frame = -2 Query: 485 VGHVPLRVAKAKQLLGTINNNFGTLAFCRRYLD-RIGETKYLMALKNLCDVGIVQPYPPL 309 V P+R+ +A+ LL I + TL F R+L + E + +AL+ L G + YP L Sbjct: 209 VRDAPVRMVQARFLLAKIKREYKTLPFAYRWLQGEMPEGQLKLALRTLEKSGALYGYPVL 268 Query: 308 CDVRGSYVSQFEHTILL 258 ++R V+QFEHTI++ Sbjct: 269 REIRNGLVTQFEHTIIV 285
>AMPM_METTH (O27355) Methionine aminopeptidase (EC 3.4.11.18) (MAP) (Peptidase| M) Length = 299 Score = 46.6 bits (109), Expect = 4e-05 Identities = 24/73 (32%), Positives = 43/73 (58%), Gaps = 1/73 (1%) Frame = -2 Query: 473 PLRVAKAKQLLGTINNNFGTLAFCRRYLDRIGETKYLMA-LKNLCDVGIVQPYPPLCDVR 297 PLR+ A+++LG I + L F +R+L+ + K L A ++ L + PY L + Sbjct: 217 PLRLVHARRVLGKIREEYHALPFAQRWLEEYFDAKRLNASMRMLIQSRAIYPYHVLREKS 276 Query: 296 GSYVSQFEHTILL 258 G+ V+Q+EHT+++ Sbjct: 277 GAMVAQWEHTVIV 289
>AMPM_METJA (Q58725) Methionine aminopeptidase (EC 3.4.11.18) (MAP) (Peptidase| M) Length = 294 Score = 42.0 bits (97), Expect = 0.001 Identities = 24/82 (29%), Positives = 42/82 (51%) Frame = -2 Query: 473 PLRVAKAKQLLGTINNNFGTLAFCRRYLDRIGETKYLMALKNLCDVGIVQPYPPLCDVRG 294 P+R+ +A++LL I+ N+ L F R++ + +AL +L + YP L + Sbjct: 215 PIRLPQARKLLDVISKNYPYLPFAERWV--LKNESERLALNSLIRASCIYGYPILKEREN 272 Query: 293 SYVSQFEHTILLRPTCKEVISR 228 V Q EHTIL+ E+ ++ Sbjct: 273 GIVGQAEHTILITENGVEITTK 294
>AMPM_SULSO (P95963) Methionine aminopeptidase (EC 3.4.11.18) (MAP) (Peptidase| M) Length = 301 Score = 40.0 bits (92), Expect = 0.004 Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 2/71 (2%) Frame = -2 Query: 461 AKAKQLLGTINNNFGTLAFCRRYLDRIGET--KYLMALKNLCDVGIVQPYPPLCDVRGSY 288 ++ +L+ I F L F R+L + +KNL G ++ YP L +++ Sbjct: 220 SRENELIDFIYTRFNYLPFSERWLKEFSTNVDELRNNIKNLVKKGALRGYPILIEIKKGV 279 Query: 287 VSQFEHTILLR 255 VSQFEHT++++ Sbjct: 280 VSQFEHTVIVK 290
>PA2G4_MOUSE (P50580) Proliferation-associated protein 2G4| (Proliferation-associated protein 1) (Protein p38-2G4) (Mpp1) (IRES-specific cellular trans-acting factor 45 kDa) (ITAF45) Length = 393 Score = 33.5 bits (75), Expect = 0.35 Identities = 20/82 (24%), Positives = 37/82 (45%) Frame = -2 Query: 470 LRVAKAKQLLGTINNNFGTLAFCRRYLDRIGETKYLMALKNLCDVGIVQPYPPLCDVRGS 291 L++ ++ + F + F R + E K M + ++QP+ L + G Sbjct: 256 LKMKTSRAFFSEVERRFDAMPFTLRAFE--DEKKARMGVVECAKHELLQPFNVLYEKEGE 313 Query: 290 YVSQFEHTILLRPTCKEVISRG 225 +V+QF+ T+LL P I+ G Sbjct: 314 FVAQFKFTVLLMPNGPMRITSG 335
>PA2G4_HUMAN (Q9UQ80) Proliferation-associated protein 2G4 (Cell cycle protein| p38-2G4 homolog) (hG4-1) (ErbB3-binding protein 1) Length = 393 Score = 33.5 bits (75), Expect = 0.35 Identities = 20/82 (24%), Positives = 37/82 (45%) Frame = -2 Query: 470 LRVAKAKQLLGTINNNFGTLAFCRRYLDRIGETKYLMALKNLCDVGIVQPYPPLCDVRGS 291 L++ ++ + F + F R + E K M + ++QP+ L + G Sbjct: 256 LKMKTSRAFFSEVERRFDAMPFTLRAFE--DEKKARMGVVECAKHELLQPFNVLYEKEGE 313 Query: 290 YVSQFEHTILLRPTCKEVISRG 225 +V+QF+ T+LL P I+ G Sbjct: 314 FVAQFKFTVLLMPNGPMRITSG 335
>Y1403_METJA (Q58798) Hypothetical protein MJ1403| Length = 374 Score = 31.2 bits (69), Expect = 1.8 Identities = 19/65 (29%), Positives = 32/65 (49%) Frame = -2 Query: 467 RVAKAKQLLGTINNNFGTLAFCRRYLDRIGETKYLMALKNLCDVGIVQPYPPLCDVRGSY 288 ++AK G N+ +GT+ + R++ I T K L V +V P + D+ G+Y Sbjct: 111 KIAKPSTSNGCYNSTYGTVFYDERFIVEIPVTIDTQDYK-LTGVKVVGGIPKIVDMGGTY 169 Query: 287 VSQFE 273 + FE Sbjct: 170 TNAFE 174
>AMZ2_MACFA (Q4R684) Archaemetzincin-2 (EC 3.-.-.-) (Archeobacterial| metalloproteinase-like protein 2) Length = 360 Score = 28.9 bits (63), Expect = 8.7 Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 18/84 (21%) Frame = -3 Query: 241 KSYPEATTTDWCCVSSLYLPLQAISVLLPS------------------WVTCVRYGSNGT 116 K + +++D+ ++ Y+P +LL S W+ C+ GSN Sbjct: 219 KKLKKTSSSDYSIFNNYYIPEITSVLLLRSCKTLTHEIGHIFGLRHCQWLACLMQGSNHL 278 Query: 115 SESDK*CSYIVPFCFLRLKFGKXF 44 ESD+ + P C +L+ F Sbjct: 279 EESDRRPLNLCPICLRKLQCAVGF 302
>OXAA_MYCCT (P43042) Membrane protein oxaA| Length = 388 Score = 28.9 bits (63), Expect = 8.7 Identities = 13/34 (38%), Positives = 23/34 (67%) Frame = -3 Query: 202 VSSLYLPLQAISVLLPSWVTCVRYGSNGTSESDK 101 + ++YLPLQA+S+LLP+ + + S +E+ K Sbjct: 281 ILAIYLPLQAVSMLLPTLLQMKKQKSITLTEAQK 314 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 79,201,822 Number of Sequences: 219361 Number of extensions: 1699726 Number of successful extensions: 4147 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 3976 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4142 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3869946934 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
