ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd16o04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009267.1| Triticum aestivum clone wlk8.pk0002.a5:fis, full insert mRNA sequence Length = 695 Score = 769 bits (388), Expect = 0.0 Identities = 495/526 (94%), Gaps = 10/526 (1%) Strand = Plus / Minus Query: 6 aaacagtgttatgcctcacagtataacttttacaagnagcgtacactactgcctaggnaa 65 ||||||||||||||||||||||| |||| ||||||| ||||||| ||||||||||| || Sbjct: 523 aaacagtgttatgcctcacagtagaactattacaag-agcgtacgctactgcctag-aaa 466 Query: 66 aacatcaagtacagctacaaacacagcacgcagnatctaccttgacagtgaagctcacaa 125 | ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 465 accatcaagtacagctacaaacacagcacgcag-atctaccttgacagtgaagctcacaa 407 Query: 126 tcaaagggacagacacatggtgaaggattgcggttgatgaagatcgtaacatgcattgca 185 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 406 tcaaagggacagatacatggtgaaggattgcggttgatgaagatcgtaacatgcattgca 347 Query: 186 tgcccgtattataccttgacatata-ttttacagtggcgctattctttcacgtatttggc 244 |||||||||||||| ||||| || | |||||||||||||||||||||||||||||||||| Sbjct: 346 tgcccgtattatactttgacgtaaaattttacagtggcgctattctttcacgtatttggc 287 Query: 245 atctttggcaacttcttcatcttcttcatcgtcgtcaaagtcatcgctgtcatcgctgtc 304 ||||||||||||||| || |||||||| || |||||| || ||| || ||||| Sbjct: 286 atctttggcaacttcatcgtcttcttcttc------aaagtcgtcaaagtcgtcactgtc 233 Query: 305 gtattgcagaaggctgaagtccctagactgcgcctccttcagcctttcctggattctttc 364 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 232 gtattgtagaaggctgaagtccctagactgcgcctccttcagcctttcctggattctttc 173 Query: 365 cttgatggcagttcccattgaatggcaaccttcctcgaatttctctagaaaaccaacaac 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 172 cttgatggcagttcccattgaatggcaaccttcctcgaatttctctagaaaaccaacaac 113 Query: 425 ccagcgatctgcattttcaacccactcttcctggagttttgccactgtactccacttctc 484 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112 ccagcgatctgcgttttcaacccactcttcctggagttttgccactgtactccacttctc 53 Query: 485 ccccactttttcttggtgctgcttcactttgtcacgcagggttttc 530 ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 52 ccctactttttcttggtgctgcttcactttgtcacgcagggttttc 7
>ref|XM_464309.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1370 Score = 398 bits (201), Expect = e-108 Identities = 297/329 (90%) Strand = Plus / Minus Query: 366 ttgatggcagttcccattgaatggcaaccttcctcgaatttctctagaaaaccaacaacc 425 |||||||||||||||||||| ||||| ||||| || || ||||| ||||||||| ||||| Sbjct: 942 ttgatggcagttcccattgagtggcagccttcttcaaacttctccagaaaaccagcaacc 883 Query: 426 cagcgatctgcattttcaacccactcttcctggagttttgccactgtactccacttctcc 485 || |||||||||||||| |||||||||||||||||||| |||| |||| ||||||||||| Sbjct: 882 catcgatctgcattttccacccactcttcctggagtttcgccattgtattccacttctcc 823 Query: 486 cccactttttcttggtgctgcttcactttgtcacgcagggttttcaatcccatattaact 545 || |||||||||||||||||||||||||||||||||||| |||| |||||||| |||||| Sbjct: 822 cctactttttcttggtgctgcttcactttgtcacgcaggttttttaatcccatgttaact 763 Query: 546 cttagtcttttttccttcacatagctgacaccaagatcatttctgctgtaccccctggcc 605 || |||||||||||||| || || |||||||||||||| |||||| |||||||||||||| Sbjct: 762 ctcagtcttttttccttaacgtaactgacaccaagatcctttctggtgtaccccctggcc 703 Query: 606 agattgcgcataacatactcattataatctttaacaatcctcattataatatctgaggtt 665 || || ||||||||||||||||||||||| |||||||||| ||||||||||||||| || Sbjct: 702 aggttccgcataacatactcattataatccttaacaatccgcattataatatctgacgtc 643 Query: 666 gatattccatccgtgcgcttggtctcctt 694 ||||| ||||| ||||||| ||| ||||| Sbjct: 642 gatatcccatctgtgcgctgggtttcctt 614
>dbj|AK070565.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023056M07, full insert sequence Length = 1370 Score = 398 bits (201), Expect = e-108 Identities = 297/329 (90%) Strand = Plus / Minus Query: 366 ttgatggcagttcccattgaatggcaaccttcctcgaatttctctagaaaaccaacaacc 425 |||||||||||||||||||| ||||| ||||| || || ||||| ||||||||| ||||| Sbjct: 942 ttgatggcagttcccattgagtggcagccttcttcaaacttctccagaaaaccagcaacc 883 Query: 426 cagcgatctgcattttcaacccactcttcctggagttttgccactgtactccacttctcc 485 || |||||||||||||| |||||||||||||||||||| |||| |||| ||||||||||| Sbjct: 882 catcgatctgcattttccacccactcttcctggagtttcgccattgtattccacttctcc 823 Query: 486 cccactttttcttggtgctgcttcactttgtcacgcagggttttcaatcccatattaact 545 || |||||||||||||||||||||||||||||||||||| |||| |||||||| |||||| Sbjct: 822 cctactttttcttggtgctgcttcactttgtcacgcaggttttttaatcccatgttaact 763 Query: 546 cttagtcttttttccttcacatagctgacaccaagatcatttctgctgtaccccctggcc 605 || |||||||||||||| || || |||||||||||||| |||||| |||||||||||||| Sbjct: 762 ctcagtcttttttccttaacgtaactgacaccaagatcctttctggtgtaccccctggcc 703 Query: 606 agattgcgcataacatactcattataatctttaacaatcctcattataatatctgaggtt 665 || || ||||||||||||||||||||||| |||||||||| ||||||||||||||| || Sbjct: 702 aggttccgcataacatactcattataatccttaacaatccgcattataatatctgacgtc 643 Query: 666 gatattccatccgtgcgcttggtctcctt 694 ||||| ||||| ||||||| ||| ||||| Sbjct: 642 gatatcccatctgtgcgctgggtttcctt 614
>gb|AY105501.1| Zea mays PCO142408 mRNA sequence Length = 1374 Score = 337 bits (170), Expect = 3e-89 Identities = 305/350 (87%) Strand = Plus / Minus Query: 345 agcctttcctggattctttccttgatggcagttcccattgaatggcaaccttcctcgaat 404 ||||| |||||||| || ||||||||||| || |||||||| ||||| |||||||| || Sbjct: 935 agcctctcctggatcctctccttgatggctgtccccattgagtggcacccttcctcaaac 876 Query: 405 ttctctagaaaaccaacaacccagcgatctgcattttcaacccactcttcctggagtttt 464 ||||||| |||||| | |||||||| ||||||||||| ||||||||||||||||||||| Sbjct: 875 ttctctaagaaaccagccacccagcggtctgcattttccacccactcttcctggagtttt 816 Query: 465 gccactgtactccacttctcccccactttttcttggtgctgcttcactttgtcacgcagg 524 || || || |||||||||||||| ||||||||||||||||| |||||| ||||||||||| Sbjct: 815 gcaaccgtgctccacttctcccctactttttcttggtgctgtttcactctgtcacgcagg 756 Query: 525 gttttcaatcccatattaactcttagtcttttttccttcacatagctgacaccaagatca 584 |||| | |||||| || |||| |||| ||||||||| ||||| || ||||||||||| Sbjct: 755 tttttaagtcccatgttcactcgcagtcgtttttccttgacataactaacaccaagatcc 696 Query: 585 tttctgctgtaccccctggccagattgcgcataacatactcattataatctttaacaatc 644 ||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 695 tttctagtgtagcccctggccagattccgcataacatactcattataatctttaacaatc 636 Query: 645 ctcattataatatctgaggttgatattccatccgtgcgcttggtctcctt 694 | ||||||||| || || |||||||| ||||| ||||||| |||||||| Sbjct: 635 cgcattataatgtccgatgttgatatcccatcagtgcgctgagtctcctt 586
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 153 bits (77), Expect = 9e-34 Identities = 113/125 (90%) Strand = Plus / Minus Query: 570 ctgacaccaagatcatttctgctgtaccccctggccagattgcgcataacatactcatta 629 |||||||||||||| |||||| |||||||||||||||| || |||||||||||||||||| Sbjct: 4027103 ctgacaccaagatcctttctggtgtaccccctggccaggttccgcataacatactcatta 4027044 Query: 630 taatctttaacaatcctcattataatatctgaggttgatattccatccgtgcgcttggtc 689 ||||| |||||||||| ||||||||||||||| || ||||| ||||| ||||||| ||| Sbjct: 4027043 taatccttaacaatccgcattataatatctgacgtcgatatcccatctgtgcgctgggtt 4026984 Query: 690 tcctt 694 ||||| Sbjct: 4026983 tcctt 4026979 Score = 125 bits (63), Expect = 2e-25 Identities = 78/83 (93%) Strand = Plus / Minus Query: 479 cttctcccccactttttcttggtgctgcttcactttgtcacgcagggttttcaatcccat 538 ||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||| Sbjct: 4027315 cttctcccctactttttcttggtgctgcttcactttgtcacgcaggttttttaatcccat 4027256 Query: 539 attaactcttagtcttttttcct 561 |||||||| ||||||||||||| Sbjct: 4027255 gttaactctcagtcttttttcct 4027233 Score = 107 bits (54), Expect = 5e-20 Identities = 90/102 (88%) Strand = Plus / Minus Query: 379 ccattgaatggcaaccttcctcgaatttctctagaaaaccaacaacccagcgatctgcat 438 ||||||| ||||| ||||| || || ||||| ||||||||| ||||||| |||||||||| Sbjct: 4028131 ccattgagtggcagccttcttcaaacttctccagaaaaccagcaacccatcgatctgcat 4028072 Query: 439 tttcaacccactcttcctggagttttgccactgtactccact 480 |||| |||||||||||||||||||| |||| |||| |||||| Sbjct: 4028071 tttccacccactcttcctggagtttcgccattgtattccact 4028030
>dbj|AP005772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0073A21 Length = 170051 Score = 153 bits (77), Expect = 9e-34 Identities = 113/125 (90%) Strand = Plus / Minus Query: 570 ctgacaccaagatcatttctgctgtaccccctggccagattgcgcataacatactcatta 629 |||||||||||||| |||||| |||||||||||||||| || |||||||||||||||||| Sbjct: 73769 ctgacaccaagatcctttctggtgtaccccctggccaggttccgcataacatactcatta 73710 Query: 630 taatctttaacaatcctcattataatatctgaggttgatattccatccgtgcgcttggtc 689 ||||| |||||||||| ||||||||||||||| || ||||| ||||| ||||||| ||| Sbjct: 73709 taatccttaacaatccgcattataatatctgacgtcgatatcccatctgtgcgctgggtt 73650 Query: 690 tcctt 694 ||||| Sbjct: 73649 tcctt 73645 Score = 125 bits (63), Expect = 2e-25 Identities = 78/83 (93%) Strand = Plus / Minus Query: 479 cttctcccccactttttcttggtgctgcttcactttgtcacgcagggttttcaatcccat 538 ||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||| Sbjct: 73981 cttctcccctactttttcttggtgctgcttcactttgtcacgcaggttttttaatcccat 73922 Query: 539 attaactcttagtcttttttcct 561 |||||||| ||||||||||||| Sbjct: 73921 gttaactctcagtcttttttcct 73899 Score = 107 bits (54), Expect = 5e-20 Identities = 90/102 (88%) Strand = Plus / Minus Query: 379 ccattgaatggcaaccttcctcgaatttctctagaaaaccaacaacccagcgatctgcat 438 ||||||| ||||| ||||| || || ||||| ||||||||| ||||||| |||||||||| Sbjct: 74797 ccattgagtggcagccttcttcaaacttctccagaaaaccagcaacccatcgatctgcat 74738 Query: 439 tttcaacccactcttcctggagttttgccactgtactccact 480 |||| |||||||||||||||||||| |||| |||| |||||| Sbjct: 74737 tttccacccactcttcctggagtttcgccattgtattccact 74696
>gb|BT014268.1| Lycopersicon esculentum clone 133493R, mRNA sequence Length = 1182 Score = 93.7 bits (47), Expect = 7e-16 Identities = 137/167 (82%) Strand = Plus / Minus Query: 526 ttttcaatcccatattaactcttagtcttttttccttcacatagctgacaccaagatcat 585 ||||||| ||| | || ||||| || |||||||||||||| ||||| | ||||||||| Sbjct: 662 ttttcaaacccctgttcactctcagccttttttccttcacgtagctcagaccaagatccg 603 Query: 586 ttctgctgtaccccctggccagattgcgcataacatactcattataatctttaacaatcc 645 |||| || || ||| ||| ||||||||| ||||| ||||| || ||||| ||||||| Sbjct: 602 ttcttgaatatcctctgtccaaattgcgcatcacatattcattgtagtcttttacaatcc 543 Query: 646 tcattataatatctgaggttgatattccatccgtgcgcttggtctcc 692 ||||||| | |||||| || ||||||||||| || |||||||||||| Sbjct: 542 tcattattaaatctgaagtagatattccatcagtccgcttggtctcc 496
>dbj|D63168.1|BNACCTB Brassica napus mRNA for CTP:phosphocholine cytidylyltransferase, complete cds Length = 1196 Score = 61.9 bits (31), Expect = 3e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 612 cgcataacatactcattataatctttaacaatcctcattataatatctgaggttgatatt 671 ||||| ||||||| |||||||||||| || ||||||||||| ||||| || || ||||| Sbjct: 553 cgcatgacatactgattataatctttcactatcctcattattatatccgaagtagatatc 494 Query: 672 ccatccgtgcgcttggtctcctt 694 || || || ||||| |||||||| Sbjct: 493 ccttcagttcgcttagtctcctt 471
>dbj|D63167.1|BNACCTA Brassica napus mRNA for CTP:phosphocholine cytidylyltransferase, complete cds Length = 1099 Score = 61.9 bits (31), Expect = 3e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 612 cgcataacatactcattataatctttaacaatcctcattataatatctgaggttgatatt 671 ||||| ||||||| |||||||||||| || ||||||||||| ||||| || || ||||| Sbjct: 523 cgcatgacatactgattataatctttcactatcctcattattatatccgaagtagatatc 464 Query: 672 ccatccgtgcgcttggtctcctt 694 || || || ||||| |||||||| Sbjct: 463 ccttcagttcgcttagtctcctt 441
>emb|AJ276295.1|CSI276295 Citrus sinensis partial mRNA for ACC synthase (acs2 gene) Length = 2564 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 387 tggcaaccttcctcgaatttctctagaaaaccaacaacccagcgatctgcattttcaacc 446 ||||||||||| || || |||| || |||||| ||||||||||||| |||||||| ||| Sbjct: 380 tggcaaccttcttcaaacatctcaaggaaaccagcaacccagcgatcagcattttccacc 321 Query: 447 cactc 451 ||||| Sbjct: 320 cactc 316 Score = 50.1 bits (25), Expect = 0.010 Identities = 55/65 (84%) Strand = Plus / Minus Query: 612 cgcataacatactcattataatctttaacaatcctcattataatatctgaggttgatatt 671 ||||| ||||||| ||||| ||||||||||| ||||| ||||| ||||| ||||| || Sbjct: 155 cgcatcacatactggttatagtctttaacaattctcataataatgtctgatgttgaaatc 96 Query: 672 ccatc 676 ||||| Sbjct: 95 ccatc 91
>gb|AE017353.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 13, complete sequence Length = 787999 Score = 56.0 bits (28), Expect = 2e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 256 cttcttcatcttcttcatcgtcgtcaaa 283 |||||||||||||||||||||||||||| Sbjct: 448283 cttcttcatcttcttcatcgtcgtcaaa 448310
>ref|XM_568449.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNM01540) partial mRNA Length = 1470 Score = 56.0 bits (28), Expect = 2e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 256 cttcttcatcttcttcatcgtcgtcaaa 283 |||||||||||||||||||||||||||| Sbjct: 1102 cttcttcatcttcttcatcgtcgtcaaa 1075
>dbj|D58404.1| Brassica napus mRNA for CTP:phosphocholine cytidylyltransferase, complete cds Length = 1382 Score = 56.0 bits (28), Expect = 2e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 536 catattaactcttagtcttttttccttcacatagctgacaccaagatc 583 |||||||||||| ||||| |||||||| ||| |||| ||||||||||| Sbjct: 645 catattaactctaagtctcttttccttgacaaagctaacaccaagatc 598 Score = 44.1 bits (22), Expect = 0.61 Identities = 55/66 (83%) Strand = Plus / Minus Query: 386 atggcaaccttcctcgaatttctctagaaaaccaacaacccagcgatctgcattttcaac 445 |||||||||||| || ||| | || ||||| ||| | ||||| ||||||||||| || || Sbjct: 795 atggcaaccttcttcaaatatttccagaaatccagcgacccatcgatctgcattctctac 736 Query: 446 ccactc 451 |||||| Sbjct: 735 ccactc 730
>gb|AC131248.14| Medicago truncatula clone mth2-28n22, complete sequence Length = 136333 Score = 54.0 bits (27), Expect = 6e-04 Identities = 75/91 (82%) Strand = Plus / Minus Query: 604 ccagattgcgcataacatactcattataatctttaacaatcctcattataatatctgagg 663 ||||||| ||||| ||||||| |||||||||||| | || |||||||| ||||| |||| Sbjct: 85119 ccagattacgcattacatactgattataatctttgatgattctcattatgatatcagagg 85060 Query: 664 ttgatattccatccgtgcgcttggtctcctt 694 | || ||||| || || ||||| || ||||| Sbjct: 85059 tagaaattccttcagtccgctttgtttcctt 85029 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 cgatctgcattttcaaccca 448 |||||||||||||||||||| Sbjct: 85666 cgatctgcattttcaaccca 85647
>dbj|D63166.1| Brassica napus mRNA for CTP:phosphocholine cytidylyltransferase, complete cds Length = 1321 Score = 54.0 bits (27), Expect = 6e-04 Identities = 108/135 (80%) Strand = Plus / Minus Query: 536 catattaactcttagtcttttttccttcacatagctgacaccaagatcatttctgctgta 595 |||||||||||| ||||| |||||||| ||| |||| || |||||||| | || || Sbjct: 642 catattaactctaagtctcttttccttgacaaagctaactccaagatcttcccttgaata 583 Query: 596 ccccctggccagattgcgcataacatactcattataatctttaacaatcctcattataat 655 || || ||| ||| ||||||||||||| ||||||||||| || || ||||| ||||| Sbjct: 582 tcctctatccaaattacgcataacatactggttataatctttcactattctcatgataat 523 Query: 656 atctgaggttgatat 670 || ||||||||||| Sbjct: 522 gtccgaggttgatat 508 Score = 44.1 bits (22), Expect = 0.61 Identities = 55/66 (83%) Strand = Plus / Minus Query: 386 atggcaaccttcctcgaatttctctagaaaaccaacaacccagcgatctgcattttcaac 445 |||||||||||| || ||| | || ||||| ||| | ||||| ||||||||||| || || Sbjct: 792 atggcaaccttcttcaaatatttcaagaaatccagcgacccatcgatctgcattctctac 733 Query: 446 ccactc 451 |||||| Sbjct: 732 ccactc 727
>ref|NM_128785.2| Arabidopsis thaliana choline-phosphate cytidylyltransferase/ nucleotidyltransferase AT2G32260 mRNA, complete cds Length = 1528 Score = 52.0 bits (26), Expect = 0.002 Identities = 110/138 (79%) Strand = Plus / Minus Query: 536 catattaactcttagtcttttttccttcacatagctgacaccaagatcatttctgctgta 595 |||||||||||| ||||| |||||||| ||| |||| || |||||||| | || ||| Sbjct: 744 catattaactctaagtctcttttccttgacaaagctaactccaagatcttcccttgagta 685 Query: 596 ccccctggccagattgcgcataacatactcattataatctttaacaatcctcattataat 655 || || ||| || ||||| ||||||| ||| |||||||| || || |||||||| || Sbjct: 684 tcctctatccaagttacgcatgacatactgattgtaatctttcactattctcattattat 625 Query: 656 atctgaggttgatattcc 673 ||| ||||| |||||||| Sbjct: 624 atccgaggtcgatattcc 607 Score = 48.1 bits (24), Expect = 0.039 Identities = 66/80 (82%) Strand = Plus / Minus Query: 372 gcagttcccattgaatggcaaccttcctcgaatttctctagaaaaccaacaacccagcga 431 ||||||||||| |||||||||||| || ||| | || ||||| ||| | ||||| ||| Sbjct: 908 gcagttcccatcttatggcaaccttcttcaaatatttcaagaaatccagcgacccatcga 849 Query: 432 tctgcattttcaacccactc 451 |||||||| || |||||||| Sbjct: 848 tctgcattctctacccactc 829
>gb|BT000207.1| Arabidopsis thaliana putative phospholipid cytidylyltransferase (At2g32260) mRNA, complete cds Length = 1314 Score = 52.0 bits (26), Expect = 0.002 Identities = 110/138 (79%) Strand = Plus / Minus Query: 536 catattaactcttagtcttttttccttcacatagctgacaccaagatcatttctgctgta 595 |||||||||||| ||||| |||||||| ||| |||| || |||||||| | || ||| Sbjct: 615 catattaactctaagtctcttttccttgacaaagctaactccaagatcttcccttgagta 556 Query: 596 ccccctggccagattgcgcataacatactcattataatctttaacaatcctcattataat 655 || || ||| || ||||| ||||||| ||| |||||||| || || |||||||| || Sbjct: 555 tcctctatccaagttacgcatgacatactgattgtaatctttcactattctcattattat 496 Query: 656 atctgaggttgatattcc 673 ||| ||||| |||||||| Sbjct: 495 atccgaggtcgatattcc 478 Score = 48.1 bits (24), Expect = 0.039 Identities = 66/80 (82%) Strand = Plus / Minus Query: 372 gcagttcccattgaatggcaaccttcctcgaatttctctagaaaaccaacaacccagcga 431 ||||||||||| |||||||||||| || ||| | || ||||| ||| | ||||| ||| Sbjct: 779 gcagttcccatcttatggcaaccttcttcaaatatttcaagaaatccagcgacccatcga 720 Query: 432 tctgcattttcaacccactc 451 |||||||| || |||||||| Sbjct: 719 tctgcattctctacccactc 700
>gb|AY136393.1| Arabidopsis thaliana putative phospholipid cytidylyltransferase (At2g32260) mRNA, complete cds Length = 1520 Score = 52.0 bits (26), Expect = 0.002 Identities = 110/138 (79%) Strand = Plus / Minus Query: 536 catattaactcttagtcttttttccttcacatagctgacaccaagatcatttctgctgta 595 |||||||||||| ||||| |||||||| ||| |||| || |||||||| | || ||| Sbjct: 736 catattaactctaagtctcttttccttgacaaagctaactccaagatcttcccttgagta 677 Query: 596 ccccctggccagattgcgcataacatactcattataatctttaacaatcctcattataat 655 || || ||| || ||||| ||||||| ||| |||||||| || || |||||||| || Sbjct: 676 tcctctatccaagttacgcatgacatactgattgtaatctttcactattctcattattat 617 Query: 656 atctgaggttgatattcc 673 ||| ||||| |||||||| Sbjct: 616 atccgaggtcgatattcc 599 Score = 48.1 bits (24), Expect = 0.039 Identities = 66/80 (82%) Strand = Plus / Minus Query: 372 gcagttcccattgaatggcaaccttcctcgaatttctctagaaaaccaacaacccagcga 431 ||||||||||| |||||||||||| || ||| | || ||||| ||| | ||||| ||| Sbjct: 900 gcagttcccatcttatggcaaccttcttcaaatatttcaagaaatccagcgacccatcga 841 Query: 432 tctgcattttcaacccactc 451 |||||||| || |||||||| Sbjct: 840 tctgcattctctacccactc 821
>emb|BX820402.1|CNS0A8Q8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH29ZH09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1336 Score = 52.0 bits (26), Expect = 0.002 Identities = 110/138 (79%) Strand = Plus / Minus Query: 536 catattaactcttagtcttttttccttcacatagctgacaccaagatcatttctgctgta 595 |||||||||||| ||||| |||||||| ||| |||| || |||||||| | || ||| Sbjct: 740 catattaactctaagtctcttttccttgacaaagctaactccaagatcttcccttgagta 681 Query: 596 ccccctggccagattgcgcataacatactcattataatctttaacaatcctcattataat 655 || || ||| || ||||| ||||||| ||| |||||||| || || |||||||| || Sbjct: 680 tcctctatccaagttacgcatgacatactgattgtaatctttcactattctcattattat 621 Query: 656 atctgaggttgatattcc 673 ||| ||||| |||||||| Sbjct: 620 atccgaggtcgatattcc 603 Score = 48.1 bits (24), Expect = 0.039 Identities = 66/80 (82%) Strand = Plus / Minus Query: 372 gcagttcccattgaatggcaaccttcctcgaatttctctagaaaaccaacaacccagcga 431 ||||||||||| |||||||||||| || ||| | || ||||| ||| | ||||| ||| Sbjct: 904 gcagttcccatcttatggcaaccttcttcaaatatttcaagaaatccagcgacccatcga 845 Query: 432 tctgcattttcaacccactc 451 |||||||| || |||||||| Sbjct: 844 tctgcattctctacccactc 825
>emb|BX820129.1|CNS0A8JJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS78ZC10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1361 Score = 52.0 bits (26), Expect = 0.002 Identities = 110/138 (79%) Strand = Plus / Minus Query: 536 catattaactcttagtcttttttccttcacatagctgacaccaagatcatttctgctgta 595 |||||||||||| ||||| |||||||| ||| |||| || |||||||| | || ||| Sbjct: 689 catattaactctaagtctcttttccttgacaaagctaactccaagatcttcccttgagta 630 Query: 596 ccccctggccagattgcgcataacatactcattataatctttaacaatcctcattataat 655 || || ||| || ||||| ||||||| ||| |||||||| || || |||||||| || Sbjct: 629 tcctctatccaagttacgcatgacatactgattgtaatctttcactattctcattattat 570 Query: 656 atctgaggttgatattcc 673 ||| ||||| |||||||| Sbjct: 569 atccgaggtcgatattcc 552 Score = 48.1 bits (24), Expect = 0.039 Identities = 66/80 (82%) Strand = Plus / Minus Query: 372 gcagttcccattgaatggcaaccttcctcgaatttctctagaaaaccaacaacccagcga 431 ||||||||||| |||||||||||| || ||| | || ||||| ||| | ||||| ||| Sbjct: 853 gcagttcccatcttatggcaaccttcttcaaatatttcaagaaatccagcgacccatcga 794 Query: 432 tctgcattttcaacccactc 451 |||||||| || |||||||| Sbjct: 793 tctgcattctctacccactc 774
>emb|BX819879.1|CNS0A8JZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS41ZE12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1267 Score = 52.0 bits (26), Expect = 0.002 Identities = 110/138 (79%) Strand = Plus / Minus Query: 536 catattaactcttagtcttttttccttcacatagctgacaccaagatcatttctgctgta 595 |||||||||||| ||||| |||||||| ||| |||| || |||||||| | || ||| Sbjct: 717 catattaactctaagtctcttttccttgacaaagctaactccaagatcttcccttgagta 658 Query: 596 ccccctggccagattgcgcataacatactcattataatctttaacaatcctcattataat 655 || || ||| || ||||| ||||||| ||| |||||||| || || |||||||| || Sbjct: 657 tcctctatccaagttacgcatgacatactgattgtaatctttcactattctcattattat 598 Query: 656 atctgaggttgatattcc 673 ||| ||||| |||||||| Sbjct: 597 atccgaggtcgatattcc 580 Score = 48.1 bits (24), Expect = 0.039 Identities = 66/80 (82%) Strand = Plus / Minus Query: 372 gcagttcccattgaatggcaaccttcctcgaatttctctagaaaaccaacaacccagcga 431 ||||||||||| |||||||||||| || ||| | || ||||| ||| | ||||| ||| Sbjct: 881 gcagttcccatcttatggcaaccttcttcaaatatttcaagaaatccagcgacccatcga 822 Query: 432 tctgcattttcaacccactc 451 |||||||| || |||||||| Sbjct: 821 tctgcattctctacccactc 802
>gb|U50451.1|ATU50451 Arabidopsis thaliana CTP:phsophocholine cytidylyltransferase gene, complete cds Length = 1447 Score = 52.0 bits (26), Expect = 0.002 Identities = 110/138 (79%) Strand = Plus / Minus Query: 536 catattaactcttagtcttttttccttcacatagctgacaccaagatcatttctgctgta 595 |||||||||||| ||||| |||||||| ||| |||| || |||||||| | || ||| Sbjct: 722 catattaactctaagtctcttttccttgacaaagctaactccaagatcttcccttgagta 663 Query: 596 ccccctggccagattgcgcataacatactcattataatctttaacaatcctcattataat 655 || || ||| || ||||| ||||||| ||| |||||||| || || |||||||| || Sbjct: 662 tcctctatccaagttacgcatgacatactgattgtaatctttcactattctcattattat 603 Query: 656 atctgaggttgatattcc 673 ||| ||||| |||||||| Sbjct: 602 atccgaggtcgatattcc 585
>ref|NM_117602.3| Arabidopsis thaliana choline-phosphate cytidylyltransferase/ nucleotidyltransferase AT4G15130 mRNA, complete cds Length = 1281 Score = 50.1 bits (25), Expect = 0.010 Identities = 70/85 (82%) Strand = Plus / Minus Query: 367 tgatggcagttcccattgaatggcaaccttcctcgaatttctctagaaaaccaacaaccc 426 ||||||| ||||||||| ||| ||||||||||| || | || ||||| ||| | |||| Sbjct: 863 tgatggctgttcccattttatgacaaccttcctcaaacatttcaagaaatccagccaccc 804 Query: 427 agcgatctgcattttcaacccactc 451 | ||||| |||||||||| |||||| Sbjct: 803 aacgatcagcattttcaagccactc 779
>dbj|AB056716.1| Arabidopsis thaliana AtCCT2 mRNA for CTP:phosphorylcholine cytidylyltransferase, complete cds Length = 1238 Score = 50.1 bits (25), Expect = 0.010 Identities = 70/85 (82%) Strand = Plus / Minus Query: 367 tgatggcagttcccattgaatggcaaccttcctcgaatttctctagaaaaccaacaaccc 426 ||||||| ||||||||| ||| ||||||||||| || | || ||||| ||| | |||| Sbjct: 866 tgatggctgttcccattttatgacaaccttcctcaaacatttcaagaaatccagccaccc 807 Query: 427 agcgatctgcattttcaacccactc 451 | ||||| |||||||||| |||||| Sbjct: 806 aacgatcagcattttcaagccactc 782
>ref|XM_637967.1| Dictyostelium discoideum hypothetical protein (DDB0202970), partial mRNA Length = 537 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Minus Query: 258 tcttcatcttcttcatcgtcgtca 281 |||||||||||||||||||||||| Sbjct: 458 tcttcatcttcttcatcgtcgtca 435
>ref|NM_001016746.2| Xenopus tropicalis hypothetical protein LOC549500 (LOC549500), mRNA Length = 2891 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Minus Query: 258 tcttcatcttcttcatcgtcgtca 281 |||||||||||||||||||||||| Sbjct: 596 tcttcatcttcttcatcgtcgtca 573
>emb|CR855828.2| Xenopus tropicalis finished cDNA, clone TTpA004g16 Length = 2891 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Minus Query: 258 tcttcatcttcttcatcgtcgtca 281 |||||||||||||||||||||||| Sbjct: 596 tcttcatcttcttcatcgtcgtca 573
>gb|BT016584.1| Zea mays clone Contig417 mRNA sequence Length = 1300 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 405 ttctctagaaaaccaacaacccagcgatctgcatt 439 |||||||| |||||| ||||||||||||| ||||| Sbjct: 851 ttctctaggaaaccagcaacccagcgatccgcatt 817
>ref|XM_460929.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0F14135g) partial mRNA Length = 1953 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 258 tcttcatcttcttcatcgtcgtc 280 ||||||||||||||||||||||| Sbjct: 179 tcttcatcttcttcatcgtcgtc 157
>ref|XM_658650.1| Aspergillus nidulans FGSC A4 nuclear protein BimA (AN6138.2), mRNA Length = 2367 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 256 cttcttcatcttcttcatcgtcgtcaa 282 |||||||||| |||||||||||||||| Sbjct: 2356 cttcttcatcctcttcatcgtcgtcaa 2330
>gb|AC154768.2| Mus musculus BAC clone RP24-444E21 from chromosome 14, complete sequence Length = 135417 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 258 tcttcatcttcttcatcgtcgtc 280 ||||||||||||||||||||||| Sbjct: 54279 tcttcatcttcttcatcgtcgtc 54301
>ref|XM_756775.1| Ustilago maydis 521 hypothetical protein (UM05721.1) partial mRNA Length = 3720 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 255 acttcttcatcttcttcatcgtcgtca 281 ||||||||||||||||| ||||||||| Sbjct: 1751 acttcttcatcttcttcgtcgtcgtca 1725
>emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces hansenii Length = 2336804 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 258 tcttcatcttcttcatcgtcgtc 280 ||||||||||||||||||||||| Sbjct: 1131955 tcttcatcttcttcatcgtcgtc 1131933
>gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete genome Length = 2809422 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 255 acttcttcatcttcttcatcgtc 277 ||||||||||||||||||||||| Sbjct: 481363 acttcttcatcttcttcatcgtc 481341
>gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, complete genome Length = 2821361 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 255 acttcttcatcttcttcatcgtc 277 ||||||||||||||||||||||| Sbjct: 403679 acttcttcatcttcttcatcgtc 403657
>gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, complete genome Length = 2872769 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 255 acttcttcatcttcttcatcgtc 277 ||||||||||||||||||||||| Sbjct: 461810 acttcttcatcttcttcatcgtc 461788
>gb|AY112644.1| Zea mays CL24723_1 mRNA sequence Length = 639 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 405 ttctctagaaaaccaacaacccagcgatctgcatt 439 |||||||| |||||| ||||||||||||| ||||| Sbjct: 422 ttctctaggaaaccagcaacccagcgatccgcatt 456
>emb|X59269.1|ANBIMA A.nidulans bimA mRNA for a member of the TPR family Length = 3027 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 256 cttcttcatcttcttcatcgtcgtcaa 282 |||||||||| |||||||||||||||| Sbjct: 2768 cttcttcatcctcttcatcgtcgtcaa 2742
>ref|XM_640022.1| Dictyostelium discoideum hypothetical protein (DDB0168851), partial mRNA Length = 3381 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Plus Query: 256 cttcttcatcttcttcatcgtcgtca 281 ||||||||||||||||||| |||||| Sbjct: 299 cttcttcatcttcttcatcatcgtca 324
>ref|NM_197904.1| Oryza sativa (japonica cultivar-group) putative cholinephosphate cytidylyltransferase (OSJNBa0056G17.15), mRNA Length = 995 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 414 aaaccaacaacccagcgatctgcatt 439 |||||| ||||||||||||||||||| Sbjct: 865 aaaccagcaacccagcgatctgcatt 840
>ref|XM_706148.1| Candida albicans SC5314 glycosyl hydrolase (CaO19.8614), mRNA Length = 2850 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 253 caacttcttcatcttcttcatc 274 |||||||||||||||||||||| Sbjct: 1580 caacttcttcatcttcttcatc 1601
>gb|AY713441.1| Uncultured organism BAC21E04 isolate 3 hypothetical protein genes, complete cds; and hypothetical protein gene, partial cds Length = 2700 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 256 cttcttcatcttcttcatcgtcgtca 281 ||||||||||||||||||| |||||| Sbjct: 1553 cttcttcatcttcttcatcttcgtca 1528
>gb|AC115680.3| Dictyostelium discoideum chromosome 2 map 4915084-5005461 strain AX4, complete sequence Length = 90373 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Plus Query: 256 cttcttcatcttcttcatcgtcgtca 281 ||||||||||||||||||| |||||| Sbjct: 53927 cttcttcatcttcttcatcatcgtca 53952
>emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces hansenii Length = 2051428 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Plus Query: 256 cttcttcatcttcttcatcgtcgtca 281 ||||||||||||||||||| |||||| Sbjct: 742906 cttcttcatcttcttcatcttcgtca 742931
>gb|AF140496.2| Oryza sativa (japonica cultivar-group) cholinephosphate cytidylyltransferase (CPCT) mRNA, complete cds Length = 1464 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 414 aaaccaacaacccagcgatctgcatt 439 |||||| ||||||||||||||||||| Sbjct: 889 aaaccagcaacccagcgatctgcatt 864
>gb|AC005700.3| Arabidopsis thaliana chromosome 2 clone T32F6 map TEn5, complete sequence Length = 100424 Score = 44.1 bits (22), Expect = 0.61 Identities = 55/66 (83%) Strand = Plus / Plus Query: 386 atggcaaccttcctcgaatttctctagaaaaccaacaacccagcgatctgcattttcaac 445 |||||||||||| || ||| | || ||||| ||| | ||||| ||||||||||| || || Sbjct: 88340 atggcaaccttcttcaaatatttcaagaaatccagcgacccatcgatctgcattctctac 88399 Query: 446 ccactc 451 |||||| Sbjct: 88400 ccactc 88405
>gb|AF330161.1| Rosa hybrid cultivar 'Vivaldi' phosphocholine cytidylyltransferase mRNA, partial cds Length = 440 Score = 44.1 bits (22), Expect = 0.61 Identities = 34/38 (89%) Strand = Plus / Minus Query: 618 acatactcattataatctttaacaatcctcattataat 655 ||||||| |||||||| || ||||||||||||||||| Sbjct: 315 acatactggttataatcctttacaatcctcattataat 278
>gb|AF332093.1|AF332093 White spot syndrome virus, complete genome Length = 305107 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 256 cttcttcatcttcttcatcgtc 277 |||||||||||||||||||||| Sbjct: 21855 cttcttcatcttcttcatcgtc 21834
>gb|AC018727.10| Oryza sativa chromosome 10 BAC OSJNBa0056G17 genomic sequence, complete sequence Length = 139999 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Plus Query: 414 aaaccaacaacccagcgatctgcatt 439 |||||| ||||||||||||||||||| Sbjct: 14439 aaaccagcaacccagcgatctgcatt 14464
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 284 gtcatcgctgtcatcgctgtcg 305 |||||||||||||||||||||| Sbjct: 10892885 gtcatcgctgtcatcgctgtcg 10892906
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Plus Query: 414 aaaccaacaacccagcgatctgcatt 439 |||||| ||||||||||||||||||| Sbjct: 22559770 aaaccagcaacccagcgatctgcatt 22559795
>gb|AF369029.2| White spot syndrome virus, complete genome Length = 292967 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 256 cttcttcatcttcttcatcgtc 277 |||||||||||||||||||||| Sbjct: 70808 cttcttcatcttcttcatcgtc 70787
>gb|AF440570.1| Shrimp white spot syndrome virus, complete genome Length = 307287 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 256 cttcttcatcttcttcatcgtc 277 |||||||||||||||||||||| Sbjct: 55444 cttcttcatcttcttcatcgtc 55423
>dbj|AK073939.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076F05, full insert sequence Length = 1436 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 414 aaaccaacaacccagcgatctgcatt 439 |||||| ||||||||||||||||||| Sbjct: 898 aaaccagcaacccagcgatctgcatt 873
>dbj|AK070088.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040D23, full insert sequence Length = 822 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 284 gtcatcgctgtcatcgctgtcg 305 |||||||||||||||||||||| Sbjct: 244 gtcatcgctgtcatcgctgtcg 223
>dbj|AK060631.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-A03, full insert sequence Length = 1165 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 414 aaaccaacaacccagcgatctgcatt 439 |||||| ||||||||||||||||||| Sbjct: 849 aaaccagcaacccagcgatctgcatt 824
>gb|AF165912.1|AF165912 Arabidopsis thaliana CTP:phosphocholine cytidylyltransferase (CCT) gene, complete cds Length = 5485 Score = 44.1 bits (22), Expect = 0.61 Identities = 55/66 (83%) Strand = Plus / Minus Query: 386 atggcaaccttcctcgaatttctctagaaaaccaacaacccagcgatctgcattttcaac 445 |||||||||||| || ||| | || ||||| ||| | ||||| ||||||||||| || || Sbjct: 3966 atggcaaccttcttcaaatatttcaagaaatccagcgacccatcgatctgcattctctac 3907 Query: 446 ccactc 451 |||||| Sbjct: 3906 ccactc 3901
>emb|CR855414.2| Xenopus tropicalis finished cDNA, clone TNeu137p23 Length = 1462 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 258 tcttcatcttcttcatcgtcgtcaaa 283 |||||||| ||||||||||||||||| Sbjct: 387 tcttcatcatcttcatcgtcgtcaaa 362
>gb|AY610275.1| Sus scrofa clone rcje08_f21.y1.abd, mRNA sequence Length = 668 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 130 agggacagacacatggtgaagg 151 |||||||||||||||||||||| Sbjct: 344 agggacagacacatggtgaagg 365
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Plus Query: 414 aaaccaacaacccagcgatctgcatt 439 |||||| ||||||||||||||||||| Sbjct: 22572238 aaaccagcaacccagcgatctgcatt 22572263
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 284 gtcatcgctgtcatcgctgtcg 305 |||||||||||||||||||||| Sbjct: 10892584 gtcatcgctgtcatcgctgtcg 10892605
>emb|AL954152.5|CNS08CCQ Oryza sativa chromosome 12, . BAC OSJNBb0034E16 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 124204 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 284 gtcatcgctgtcatcgctgtcg 305 |||||||||||||||||||||| Sbjct: 41948 gtcatcgctgtcatcgctgtcg 41969
>ref|NM_114915.1| Arabidopsis thaliana unknown protein AT3G50550 transcript variant AT3G50550.1 mRNA, complete cds Length = 578 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 tcatcttcttcatcgtcgtca 281 ||||||||||||||||||||| Sbjct: 218 tcatcttcttcatcgtcgtca 198
>ref|NM_113398.2| Arabidopsis thaliana transcription factor AT3G24860 mRNA, complete cds Length = 1060 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 256 cttcttcatcttcttcatcgtcgtc 280 |||||||||||||||| |||||||| Sbjct: 560 cttcttcatcttcttcttcgtcgtc 536
>gb|AC151917.1| Phaeodactylum tricornutum clone JGIAHOK-13P1, complete sequence Length = 36667 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 256 cttcttcatcttcttcatcgtcgtc 280 ||||||| ||||||||||||||||| Sbjct: 7698 cttcttcttcttcttcatcgtcgtc 7722
>ref|XM_632925.1| Dictyostelium discoideum hypothetical protein (DDB0186761), partial mRNA Length = 3321 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 aacttcttcatcttcttcatc 274 ||||||||||||||||||||| Sbjct: 231 aacttcttcatcttcttcatc 251
>ref|XM_639564.1| Dictyostelium discoideum hypothetical protein (DDB0217189), partial mRNA Length = 996 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 ttcttcatcttcttcatcgtc 277 ||||||||||||||||||||| Sbjct: 357 ttcttcatcttcttcatcgtc 337
>ref|XM_493810.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2727 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 256 cttcttcatcttcttcatcgtcgtc 280 |||||||||| |||||||||||||| Sbjct: 916 cttcttcatcatcttcatcgtcgtc 892
>ref|XM_639503.1| Dictyostelium discoideum hypothetical protein (DDB0168190), partial mRNA Length = 996 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 ttcttcatcttcttcatcgtc 277 ||||||||||||||||||||| Sbjct: 357 ttcttcatcttcttcatcgtc 337
>ref|XM_636262.1| Dictyostelium discoideum hypothetical protein (DDB0206493), partial mRNA Length = 2961 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 257 ttcttcatcttcttcatcgtcgtca 281 ||||||||| ||||||||||||||| Sbjct: 1746 ttcttcatcatcttcatcgtcgtca 1722
>ref|XM_629518.1| Dictyostelium discoideum hypothetical protein (DDB0184472), partial mRNA Length = 1032 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 253 caacttcttcatcttcttcatcgtcgtca 281 ||||||||||| |||||||||||||||| Sbjct: 1021 caacttcttcactttcttcatcgtcgtca 993
>ref|XM_586767.2| PREDICTED: Bos taurus similar to melanoma associated antigen (mutated) 1-like 1 (LOC539380), partial mRNA Length = 1736 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 ttcttcatcttcttcatcgtc 277 ||||||||||||||||||||| Sbjct: 1125 ttcttcatcttcttcatcgtc 1105
>ref|XM_365481.1| Magnaporthe grisea 70-15 hypothetical protein (MG02183.4) partial mRNA Length = 5739 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 258 tcttcatcttcttcatcgtcg 278 ||||||||||||||||||||| Sbjct: 2036 tcttcatcttcttcatcgtcg 2016
>ref|XM_718446.1| Candida albicans SC5314 hypothetical protein (CaO19_4854), mRNA Length = 468 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 261 tcatcttcttcatcgtcgtcaaagtcatc 289 |||||||||||||||| ||||||||||| Sbjct: 370 tcatcttcttcatcgtactcaaagtcatc 398
>ref|XM_718445.1| Candida albicans SC5314 putative forkhead-like transcriptional regulator (CaO19_4853), mRNA Length = 1740 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 261 tcatcttcttcatcgtcgtcaaagtcatc 289 |||||||||||||||| ||||||||||| Sbjct: 938 tcatcttcttcatcgtactcaaagtcatc 910
>ref|XM_718256.1| Candida albicans SC5314 hypothetical protein (CaO19_12317), mRNA Length = 468 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 261 tcatcttcttcatcgtcgtcaaagtcatc 289 |||||||||||||||| ||||||||||| Sbjct: 370 tcatcttcttcatcgtactcaaagtcatc 398
>ref|XM_718255.1| Candida albicans SC5314 putative forkhead-like transcriptional regulator (CaO19_12316), mRNA Length = 1740 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 261 tcatcttcttcatcgtcgtcaaagtcatc 289 |||||||||||||||| ||||||||||| Sbjct: 938 tcatcttcttcatcgtactcaaagtcatc 910
>ref|XM_705498.1| Candida albicans SC5314 putative transporter/amino acid permease (CaO19.7792), mRNA Length = 2112 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 ttcttcatcttcttcatcgtc 277 ||||||||||||||||||||| Sbjct: 54 ttcttcatcttcttcatcgtc 74
>ref|XM_653927.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1415.2), mRNA Length = 405 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 ttcttcatcttcttcatcgtc 277 ||||||||||||||||||||| Sbjct: 191 ttcttcatcttcttcatcgtc 211
>ref|XM_453769.1| Kluyveromyces lactis NRRL Y-1140, KLLA0D16093g predicted mRNA Length = 369 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 256 cttcttcatcttcttcatcgtcgtc 280 ||||||||||||||||| ||||||| Sbjct: 97 cttcttcatcttcttcaacgtcgtc 73
>gb|BT013986.1| Lycopersicon esculentum clone 133031F, mRNA sequence Length = 1331 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 279 tcaaagtcatcgctgtcatcg 299 ||||||||||||||||||||| Sbjct: 528 tcaaagtcatcgctgtcatcg 508
>gb|AY496562.1| Physcomitrella patens chloroplast Toc125 mRNA, complete cds; nuclear gene for chloroplast product Length = 4109 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 256 cttcttcatcttcttcatcgtcgtc 280 ||||||| ||||||||||||||||| Sbjct: 747 cttcttcttcttcttcatcgtcgtc 723
>gb|DQ156904.1| Acinetobacter calcoaceticus strain DSM 1139 RNA polymerase sigma factor sigma-70 (rpoD) gene, partial cds Length = 463 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 258 tcttcatcttcttcatcgtcgtcaa 282 ||||||||||||||||| ||||||| Sbjct: 165 tcttcatcttcttcatcatcgtcaa 141
>gb|DQ156886.1| Acinetobacter calcoaceticus strain DSM 30006 RNA polymerase sigma factor sigma-70 (rpoD) gene, partial cds Length = 513 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 258 tcttcatcttcttcatcgtcgtcaa 282 ||||||||||||||||| ||||||| Sbjct: 215 tcttcatcttcttcatcatcgtcaa 191
>ref|XM_798620.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053507769.30) partial mRNA Length = 711 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 gtcatcgctgtcatcgctgtc 304 ||||||||||||||||||||| Sbjct: 573 gtcatcgctgtcatcgctgtc 553 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 284 gtcatcgctgtcatcgctgtc 304 ||||||||||||||||||||| Sbjct: 564 gtcatcgctgtcatcgctgtc 544 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 tcatcgctgtcatcgctgtc 304 |||||||||||||||||||| Sbjct: 662 tcatcgctgtcatcgctgtc 643 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 tcatcgctgtcatcgctgtc 304 |||||||||||||||||||| Sbjct: 581 tcatcgctgtcatcgctgtc 562
>gb|AC125528.4| Mus musculus BAC clone RP23-365I9 from chromosome 15, complete sequence Length = 197376 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 tacagctacaaacacagcacg 95 ||||||||||||||||||||| Sbjct: 2971 tacagctacaaacacagcacg 2951
>gb|AC127525.8| Homo sapiens chromosome 17, clone RP13-551H18, complete sequence Length = 108860 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 458 gagttttgccactgtactcca 478 ||||||||||||||||||||| Sbjct: 4389 gagttttgccactgtactcca 4409
>ref|XM_809318.1| Trypanosoma cruzi strain CL Brener DNA repair and recombination protein RAD54 (Tc00.1047053505183.40) partial mRNA Length = 3144 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 256 cttcttcatcttcttcatcgtcgtc 280 ||||||| ||||||||||||||||| Sbjct: 3094 cttcttcttcttcttcatcgtcgtc 3070
>ref|XM_813167.1| Trypanosoma cruzi strain CL Brener DNA repair and recombination protein RAD54 (Tc00.1047053508647.290) partial mRNA Length = 3138 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 256 cttcttcatcttcttcatcgtcgtc 280 ||||||| ||||||||||||||||| Sbjct: 3085 cttcttcctcttcttcatcgtcgtc 3061
>ref|XM_738978.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000202.05.0) partial mRNA Length = 2010 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 256 cttcttcatcttcttcatcgtcgtc 280 ||||||| ||||||||||||||||| Sbjct: 1780 cttcttcgtcttcttcatcgtcgtc 1756
>emb|Z86090.10|HS229A8 Human DNA sequence from clone CTA-229A8 on chromosome 22q13 Contains an RPL4 (60S Ribosomal Protein L4) and a GAPD (Liver Glyceraldehyde 3-Phosphate Dehydrogenase (EC 1.2.1.12)) pseudogene, the GPR24 gene for G protein-coupled receptor 24 (SLC1), ESTs, an STS, GSSs, genomic marker D22S279, a ca repeat polymorphism and a putative CpG island, complete sequence Length = 122557 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 480 ttctcccccactttttcttgg 500 ||||||||||||||||||||| Sbjct: 31259 ttctcccccactttttcttgg 31239
>ref|XM_792039.1| PREDICTED: Strongylocentrotus purpuratus similar to MASK-4E-BP3 protein (LOC592521), partial mRNA Length = 5635 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 256 cttcttcatcttcttcatcgtcgtc 280 |||||||||||||||| |||||||| Sbjct: 3736 cttcttcatcttcttcttcgtcgtc 3712
>gb|AC134407.6| Homo sapiens chromosome 17, clone RP11-855A2, complete sequence Length = 199875 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 458 gagttttgccactgtactcca 478 ||||||||||||||||||||| Sbjct: 135042 gagttttgccactgtactcca 135022
>emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1715506 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 256 cttcttcatcttcttcatcgtcgtc 280 ||||||||||||||||| ||||||| Sbjct: 1356328 cttcttcatcttcttcaacgtcgtc 1356352
>emb|AL133363.1|ATT20E23 Arabidopsis thaliana DNA chromosome 3, BAC clone T20E23 Length = 83513 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 tcatcttcttcatcgtcgtca 281 ||||||||||||||||||||| Sbjct: 49736 tcatcttcttcatcgtcgtca 49716
>emb|CR938710.1| Medicago truncatula chromosome 5 clone mth2-170k9, COMPLETE SEQUENCE Length = 123977 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 259 cttcatcttcttcatcgtcgt 279 ||||||||||||||||||||| Sbjct: 65775 cttcatcttcttcatcgtcgt 65795
>gb|AC046170.6| Homo sapiens chromosome 17, clone RP11-219F9, complete sequence Length = 198470 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 aacttcttcatcttcttcatc 274 ||||||||||||||||||||| Sbjct: 40130 aacttcttcatcttcttcatc 40150
>gb|U88169.2| Caenorhabditis elegans cosmid T03F1, complete sequence Length = 39043 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 261 tcatcttcttcatcgtcgtca 281 ||||||||||||||||||||| Sbjct: 25090 tcatcttcttcatcgtcgtca 25110
>gb|AC006429.4| Arabidopsis thaliana chromosome 2 clone F15K19 map mi421, complete sequence Length = 94875 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 256 cttcttcatcttcttcatcgt 276 ||||||||||||||||||||| Sbjct: 63443 cttcttcatcttcttcatcgt 63463
>gb|AC013762.6| Homo sapiens, clone RP11-2I1, complete sequence Length = 144048 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 491 tttttcttggtgctgcttcac 511 ||||||||||||||||||||| Sbjct: 69867 tttttcttggtgctgcttcac 69847
>ref|XM_942611.1| PREDICTED: Homo sapiens similar to N-ethylmaleimide sensitive fusion protein (LOC652886), mRNA Length = 399 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 aacttcttcatcttcttcatc 274 ||||||||||||||||||||| Sbjct: 119 aacttcttcatcttcttcatc 139
>gb|AF321299.1|AF321299 Caenorhabditis elegans CENP-C-like protein HCP-4 mRNA, complete cds Length = 2728 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 tcatcttcttcatcgtcgtca 281 ||||||||||||||||||||| Sbjct: 2617 tcatcttcttcatcgtcgtca 2597
>gb|BT024547.1| Arabidopsis thaliana At3g50550 mRNA, complete cds Length = 288 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 tcatcttcttcatcgtcgtca 281 ||||||||||||||||||||| Sbjct: 209 tcatcttcttcatcgtcgtca 189
>gb|S93804.1| BAF1/ABF1/YKL505=ARS-binding factor I...tRNA-Ala [Saccharomyces cerevisiae, Genomic, 8 genes, 10660 nt] Length = 10660 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 256 cttcttcatcttcttcatcgt 276 ||||||||||||||||||||| Sbjct: 8714 cttcttcatcttcttcatcgt 8734
>ref|NM_058843.3| Caenorhabditis elegans HoloCentric chromosome binding Protein family member (hcp-4) (hcp-4) mRNA, complete cds Length = 2706 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 tcatcttcttcatcgtcgtca 281 ||||||||||||||||||||| Sbjct: 2595 tcatcttcttcatcgtcgtca 2575
>gb|AC139026.4| Homo sapiens chromosome 17, clone CTD-2514I13, complete sequence Length = 226696 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 254 aacttcttcatcttcttcatc 274 ||||||||||||||||||||| Sbjct: 40727 aacttcttcatcttcttcatc 40707
>emb|BX818661.1|CNS0ACPM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL90ZD07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 720 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 256 cttcttcatcttcttcatcgtcgtc 280 |||||||||||||||| |||||||| Sbjct: 101 cttcttcatcttcttcttcgtcgtc 125
>gb|AC127378.3| Homo sapiens BAC clone RP11-608P22 from 2, complete sequence Length = 3994 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 176 atgcattgcatgcccgtatta 196 ||||||||||||||||||||| Sbjct: 3153 atgcattgcatgcccgtatta 3133
>gb|AC104807.5| Homo sapiens BAC clone RP11-616I24 from 2, complete sequence Length = 64232 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 176 atgcattgcatgcccgtatta 196 ||||||||||||||||||||| Sbjct: 1159 atgcattgcatgcccgtatta 1139
>gb|AC157277.2| Mus musculus BAC clone RP23-465H15 from chromosome 15, complete sequence Length = 177253 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 tacagctacaaacacagcacg 95 ||||||||||||||||||||| Sbjct: 91888 tacagctacaaacacagcacg 91868
>gb|BT005491.1| Arabidopsis thaliana clone U50805 unknown protein (At3g24860) mRNA, complete cds Length = 964 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 256 cttcttcatcttcttcatcgtcgtc 280 |||||||||||||||| |||||||| Sbjct: 541 cttcttcatcttcttcttcgtcgtc 517
>gb|AC116330.2| Dictyostelium discoideum chromosome 2 map 3191214-3323468 strain AX4, complete sequence Length = 132254 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 ttcttcatcttcttcatcgtc 277 ||||||||||||||||||||| Sbjct: 54385 ttcttcatcttcttcatcgtc 54405
>gb|AY088735.1| Arabidopsis thaliana clone 93591 mRNA, complete sequence Length = 578 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 tcatcttcttcatcgtcgtca 281 ||||||||||||||||||||| Sbjct: 218 tcatcttcttcatcgtcgtca 198
>gb|AC135972.11| Homo sapiens chromosome 17, clone CTD-2530H17, complete sequence Length = 158617 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 aacttcttcatcttcttcatc 274 ||||||||||||||||||||| Sbjct: 101310 aacttcttcatcttcttcatc 101330
>gb|AC004098.1|AC004098 Homo sapiens chromosome 17, clone HCIT305D20, complete sequence Length = 166978 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 aacttcttcatcttcttcatc 274 ||||||||||||||||||||| Sbjct: 39102 aacttcttcatcttcttcatc 39122
>dbj|AB028609.2| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K7P8 Length = 78529 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 256 cttcttcatcttcttcatcgtcgtc 280 |||||||||||||||| |||||||| Sbjct: 45834 cttcttcatcttcttcttcgtcgtc 45810
>dbj|AK118157.1| Arabidopsis thaliana At3g24860 mRNA for unknown protein, complete cds, clone: RAFL19-47-G19 Length = 1076 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 256 cttcttcatcttcttcatcgtcgtc 280 |||||||||||||||| |||||||| Sbjct: 560 cttcttcatcttcttcttcgtcgtc 536
>gb|AF220200.1|AF220200 Pinus taeda nascent polypeptide associated complex alpha chain mRNA, complete cds Length = 1057 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 tcatcttcttcatcgtcgtca 281 ||||||||||||||||||||| Sbjct: 209 tcatcttcttcatcgtcgtca 189
>emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ib Length = 2013089 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 256 cttcttcatcttcttcatcgtcgtc 280 ||||||||||||||||||| ||||| Sbjct: 1926056 cttcttcatcttcttcatcttcgtc 1926080
>emb|Z28117.1|SCYKL117W S.cerevisiae chromosome XI reading frame ORF YKL117w Length = 1952 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 256 cttcttcatcttcttcatcgt 276 ||||||||||||||||||||| Sbjct: 1554 cttcttcatcttcttcatcgt 1534
>gb|DQ331882.1| Synthetic construct Saccharomyces cerevisiae clone FLH202443.01X SBA1 gene, complete sequence Length = 651 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 256 cttcttcatcttcttcatcgt 276 ||||||||||||||||||||| Sbjct: 622 cttcttcatcttcttcatcgt 602
>ref|NM_121356.1| Arabidopsis thaliana ATP binding / protein binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase/ ubiquitin-protein lig> AT5G13530 mRNA, complete cds Length = 2505 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 catcttcttcatcgtcgtca 281 |||||||||||||||||||| Sbjct: 307 catcttcttcatcgtcgtca 288
>gb|AC119235.13| Mus musculus chromosome 1, clone RP24-212E3, complete sequence Length = 181695 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 544 ctcttagtcttttttccttcacat 567 |||||| ||||||||||||||||| Sbjct: 24611 ctcttactcttttttccttcacat 24634
>ref|XM_638464.1| Dictyostelium discoideum hypothetical protein (DDB0202465), partial mRNA Length = 6330 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 251 ggcaacttcttcatcttcttcatc 274 |||| ||||||||||||||||||| Sbjct: 4338 ggcatcttcttcatcttcttcatc 4361
>ref|XM_631268.1| Dictyostelium discoideum putative CMF receptor CMFR1 (DDB0191095), partial mRNA Length = 1533 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 239 tttggcatctttggcaacttcttcatct 266 ||||||| |||||||||||| ||||||| Sbjct: 597 tttggcagctttggcaactttttcatct 570
>ref|XM_629371.1| Dictyostelium discoideum hypothetical protein (DDB0185172), partial mRNA Length = 2103 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 248 tttggcaacttcttcatcttcttc 271 ||||||||||||||| |||||||| Sbjct: 444 tttggcaacttcttcttcttcttc 421
>ref|XM_478534.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2411 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 258 tcttcatcttcttcatcgtcgtca 281 ||||| |||||||||||||||||| Sbjct: 832 tcttcttcttcttcatcgtcgtca 809
>ref|NM_012926.1| Rattus norvegicus CD80 antigen (Cd80), mRNA Length = 1000 Score = 40.1 bits (20), Expect = 9.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 261 tcatcttcttcatcgtcgtcaaagtcatcgctgtcatcgc 300 ||||||||||||||| | ||| |||||||| |||||||| Sbjct: 798 tcatcttcttcatcgccatcaccgtcatcgccgtcatcgc 837
>gb|AF003249.1| Morone saxatilis myosin heavy chain FM3A (FM3A) mRNA, complete cds Length = 6174 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 gcatctttggcaacttcttc 262 |||||||||||||||||||| Sbjct: 4772 gcatctttggcaacttcttc 4753
>gb|AC113509.14| Mus musculus chromosome 1, clone RP23-377L11, complete sequence Length = 193588 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 544 ctcttagtcttttttccttcacat 567 |||||| ||||||||||||||||| Sbjct: 47935 ctcttactcttttttccttcacat 47912
>gb|AE017352.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 12, complete sequence Length = 906719 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcatcgtcgtcaaagtcatc 289 |||||||||||||||||||| Sbjct: 866184 tcatcgtcgtcaaagtcatc 866165
>gb|AE014849.1| Plasmodium falciparum 3D7 chromosome 12, section 6 of 9 of the complete sequence Length = 250421 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 tcttcatcttcttcatcgtc 277 |||||||||||||||||||| Sbjct: 70166 tcttcatcttcttcatcgtc 70185
>gb|AF211529.1| Nicotiana tabacum Avr9/Cf-9 rapidly elicited protein 31 (ACRE31) mRNA, complete cds Length = 975 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 cttcttcatcttcttcatcgtcgt 279 ||||||| |||||||||||||||| Sbjct: 184 cttcttcttcttcttcatcgtcgt 207
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 gtcatcgctgtcatcgctgt 303 |||||||||||||||||||| Sbjct: 2424706 gtcatcgctgtcatcgctgt 2424725
>ref|XM_716471.1| Candida albicans SC5314 endo-1,3-beta-glucanase (CaO19_3066), mRNA Length = 3438 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 242 ggcatctttggcaacttcttcatc 265 ||||||||||| |||||||||||| Sbjct: 2526 ggcatctttggtaacttcttcatc 2503
>ref|XM_716200.1| Candida albicans SC5314 endo-1,3-beta-glucanase (CaO19_10584), mRNA Length = 3441 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 242 ggcatctttggcaacttcttcatc 265 ||||||||||| |||||||||||| Sbjct: 2529 ggcatctttggtaacttcttcatc 2506
>gb|AC134551.4| Mus musculus BAC clone RP24-274B10 from chromosome 5, complete sequence Length = 123372 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 accttgacagtgaagctcac 123 |||||||||||||||||||| Sbjct: 22843 accttgacagtgaagctcac 22824
>ref|XM_657206.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4694.2), mRNA Length = 1821 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 cttcttcatcttcttcatcg 275 |||||||||||||||||||| Sbjct: 280 cttcttcatcttcttcatcg 261
>gb|AY214385.1| Dioscorea pyrenaica clone Bp2214 microsatellite sequence Length = 256 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 cttcttcatcttcttcatcgtcgt 279 ||||||| |||||||||||||||| Sbjct: 48 cttcttcttcttcttcatcgtcgt 25
>gb|AC110883.12| Mus musculus chromosome 8, clone RP23-200N24, complete sequence Length = 293104 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 544 ctcttagtcttttttccttcacat 567 ||||||||||| |||||||||||| Sbjct: 4354 ctcttagtcttgtttccttcacat 4331
>gb|AC144401.2| Didelphis virginiana clone LBNL3-270H19, complete sequence Length = 180378 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 cagacacatggtgaaggatt 154 |||||||||||||||||||| Sbjct: 98191 cagacacatggtgaaggatt 98210
>emb|CR751605.10| Zebrafish DNA sequence from clone DKEY-25J15 in linkage group 14, complete sequence Length = 145610 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 acatcaagtacagctacaaa 86 |||||||||||||||||||| Sbjct: 96745 acatcaagtacagctacaaa 96726
>gb|AC140923.3| Mus musculus BAC clone RP24-373O2 from chromosome Y, complete sequence Length = 196591 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 tggcaacttcttcatcttct 269 |||||||||||||||||||| Sbjct: 44306 tggcaacttcttcatcttct 44325
>gb|AC134562.5| Mus musculus BAC clone RP24-120M11 from chromosome Y, complete sequence Length = 169626 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 tggcaacttcttcatcttct 269 |||||||||||||||||||| Sbjct: 77189 tggcaacttcttcatcttct 77208
>gb|AY286500.1| Pristionchus pacificus R144.2b mRNA, complete cds Length = 777 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 cttcttcatcttcttcatcg 275 |||||||||||||||||||| Sbjct: 590 cttcttcatcttcttcatcg 609
>ref|XM_756659.1| Ustilago maydis 521 hypothetical protein (UM05605.1) partial mRNA Length = 3231 Score = 40.1 bits (20), Expect = 9.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 262 catcttcttcatcgtcgtcaaagtcatcgctg 293 ||||||| |||||||||||| |||||||||| Sbjct: 2827 catcttcctcatcgtcgtcatggtcatcgctg 2796
>ref|XM_381519.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01343.1) partial mRNA Length = 1632 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 cttcatcttcttcatcgtcg 278 |||||||||||||||||||| Sbjct: 685 cttcatcttcttcatcgtcg 666
>ref|XM_381011.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00835.1) partial mRNA Length = 2046 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 tcatcttcttcatcgtcgtc 280 |||||||||||||||||||| Sbjct: 209 tcatcttcttcatcgtcgtc 190
>emb|CR962126.1| Medicago truncatula chromosome 5 clone mth2-143k7, COMPLETE SEQUENCE Length = 117577 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 caaagggacagacacatggt 146 |||||||||||||||||||| Sbjct: 83540 caaagggacagacacatggt 83559 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 caaagggacagacacatggt 146 |||||||||||||||||||| Sbjct: 77625 caaagggacagacacatggt 77644
>ref|XM_568191.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNL06720) partial mRNA Length = 1911 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 tcatcgtcgtcaaagtcatc 289 |||||||||||||||||||| Sbjct: 473 tcatcgtcgtcaaagtcatc 454
>ref|XM_444869.1| Candida glabrata CBS138 hypothetical protein (CAGL0A02409g) partial mRNA Length = 1338 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 catcttcttcatcgtcgtca 281 |||||||||||||||||||| Sbjct: 1246 catcttcttcatcgtcgtca 1227
>gb|AC134323.3| Mus musculus BAC clone RP24-512P7 from chromosome 8, complete sequence Length = 176667 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 643 tcctcattataatatctgag 662 |||||||||||||||||||| Sbjct: 25341 tcctcattataatatctgag 25360
>gb|AY188789.1| Eschscholzia californica subsp. californica floricaula-like protein (FLO) mRNA, complete cds Length = 1251 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 258 tcttcatcttcttcatcgtcgtca 281 ||||| |||||||||||||||||| Sbjct: 662 tcttcttcttcttcatcgtcgtca 639
>gb|AC122514.4| Mus musculus BAC clone RP24-455L10 from chromosome 8, complete sequence Length = 171839 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 544 ctcttagtcttttttccttcacat 567 ||||||||||| |||||||||||| Sbjct: 156988 ctcttagtcttgtttccttcacat 156965
>gb|AC132600.3| Mus musculus BAC clone RP24-134A5 from chromosome 3, complete sequence Length = 160339 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 536 catattaactcttagtcttt 555 |||||||||||||||||||| Sbjct: 88428 catattaactcttagtcttt 88447
>ref|XM_719698.1| Plasmodium yoelii yoelii str. 17XNL stress responsive gene 6, Srg6 (PY04483) partial mRNA Length = 1905 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 tcttcatcttcttcatcgtc 277 |||||||||||||||||||| Sbjct: 221 tcttcatcttcttcatcgtc 202
>ref|XM_722018.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY06454) partial mRNA Length = 525 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 tcttcatcttcttcatcgtc 277 |||||||||||||||||||| Sbjct: 287 tcttcatcttcttcatcgtc 268
>ref|XM_732979.1| Plasmodium chabaudi chabaudi hypothetical protein (PC302307.00.0) partial mRNA Length = 684 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 tcttcatcttcttcatcgtc 277 |||||||||||||||||||| Sbjct: 623 tcttcatcttcttcatcgtc 604
>ref|XM_736371.1| Plasmodium chabaudi chabaudi chaperonin cpn60, mitochondrial precursor (PC000734.02.0) partial mRNA Length = 1683 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 tcttcatcttcttcatcgtc 277 |||||||||||||||||||| Sbjct: 1643 tcttcatcttcttcatcgtc 1624
>ref|XM_667688.1| Plasmodium berghei strain ANKA hypothetical protein (PB402266.00.0) partial mRNA Length = 504 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 tcttcatcttcttcatcgtc 277 |||||||||||||||||||| Sbjct: 287 tcttcatcttcttcatcgtc 268
>gb|AC108409.8| Mus musculus chromosome 19, clone RP23-84G7, complete sequence Length = 270854 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 491 tttttcttggtgctgcttcacttt 514 ||||||||| |||||||||||||| Sbjct: 220813 tttttcttgctgctgcttcacttt 220790
>ref|XM_670691.1| Plasmodium berghei strain ANKA hypothetical protein (PB101586.00.0) partial mRNA Length = 241 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 tcttcatcttcttcatcgtc 277 |||||||||||||||||||| Sbjct: 34 tcttcatcttcttcatcgtc 15
>ref|XM_660716.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.20382) partial mRNA Length = 1791 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 acttcttcatcttcttcatc 274 |||||||||||||||||||| Sbjct: 437 acttcttcatcttcttcatc 418
>gb|AC136138.30| Medicago truncatula clone mth2-8f9, complete sequence Length = 128267 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 aacttcttcatcttcttcat 273 |||||||||||||||||||| Sbjct: 15759 aacttcttcatcttcttcat 15778
>ref|XM_786624.1| PREDICTED: Strongylocentrotus purpuratus similar to 39 kDa FK506-binding nuclear protein (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) (LOC586862), mRNA Length = 1524 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 tcttcatcttcttcatcgtc 277 |||||||||||||||||||| Sbjct: 830 tcttcatcttcttcatcgtc 811
>emb|AL031685.18|HS963K23 Human DNA sequence from clone RP5-963K23 on chromosome 20q13.11-13.2 Contains the KRT18P4 gene for keratin 18 pseudogene 4, a Cytoskeletal 18 (Cytokeratin 18, CK18, CYK18)) pseudogene, the ZNF313 gene for zinc finger protein 313, the SPATA2 gene for spermatogenesis associated protein 2, the 3' end of the SLC9A8 gene for solute carrier family 9 (sodium/hydrogen exchanger) isoform 8 and four CpG islands, complete sequence Length = 115935 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 512 tttgtcacgcagggttttca 531 |||||||||||||||||||| Sbjct: 21980 tttgtcacgcagggttttca 21999
>emb|Y16350.1|OCNEBMRNA Oryctolagus cuniculus mRNA for nebulin Length = 3493 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 gtattgcagaaggctgaagt 324 |||||||||||||||||||| Sbjct: 1851 gtattgcagaaggctgaagt 1832
>emb|X75420.1|PFDNACPN P.falciparum (FCR3) cpn60 gene Length = 3801 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 tcttcatcttcttcatcgtc 277 |||||||||||||||||||| Sbjct: 2920 tcttcatcttcttcatcgtc 2901
>emb|CR380947.1| Candida glabrata strain CBS138 chromosome A complete sequence Length = 485192 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 catcttcttcatcgtcgtca 281 |||||||||||||||||||| Sbjct: 255484 catcttcttcatcgtcgtca 255503
>emb|BX572603.1| Rhodopseudomonas palustris CGA009 complete genome; segment 11/16 Length = 349635 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 257 ttcttcatcttcttcatcgtcgtc 280 ||||||||| |||||||||||||| Sbjct: 323140 ttcttcatcgtcttcatcgtcgtc 323163
>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome Length = 2799802 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 acttcttcatcttcttcatc 274 |||||||||||||||||||| Sbjct: 443365 acttcttcatcttcttcatc 443346
>gb|AC165148.2| Mus musculus BAC clone RP24-278K24 from chromosome 14, complete sequence Length = 197531 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 ttataccttgacatatattt 213 |||||||||||||||||||| Sbjct: 72004 ttataccttgacatatattt 71985
>emb|BX294155.1| Pirellula sp. strain 1 complete genome; segment 23/24 Length = 306550 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 ctttggcaacttcttcatct 266 |||||||||||||||||||| Sbjct: 265330 ctttggcaacttcttcatct 265349
>emb|AL391710.1|ATT6I14 Arabidopsis thaliana DNA chromosome 5, BAC clone T6I14 (ESSA project) Length = 90472 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 catcttcttcatcgtcgtca 281 |||||||||||||||||||| Sbjct: 28388 catcttcttcatcgtcgtca 28369
>emb|AJ520099.1|DDI520099 Dictyostelium discoideum mRNA for (ADP-ribosyl)transferase (adprt2 gene) Length = 2244 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 248 tttggcaacttcttcatcttcttc 271 ||||||||||||||| |||||||| Sbjct: 483 tttggcaacttcttcttcttcttc 460
>emb|AJ417770.1|AHA417770 Atlantic halibut mRNA for gonadotropin alpha subunit (GTH gene) Length = 666 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 550 gtcttttttccttcacatagctga 573 ||||||||||||| |||||||||| Sbjct: 119 gtcttttttcctttacatagctga 142
>gb|AC099061.2| Homo sapiens chromosome 1 clone RP11-105D8, complete sequence Length = 140987 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 acttctcccccactttttct 497 |||||||||||||||||||| Sbjct: 102332 acttctcccccactttttct 102313
>gb|AY044637.1| Strongylocentrotus purpuratus cyclin-dependent kinase 4 (cdk4) mRNA, complete cds Length = 3388 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 tcttcatcttcttcatcgtc 277 |||||||||||||||||||| Sbjct: 1578 tcttcatcttcttcatcgtc 1559
>gb|AC069548.6| Homo sapiens chromosome 10 clone RP11-522H2, complete sequence Length = 131909 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 tcttcatcttcttcatcgtc 277 |||||||||||||||||||| Sbjct: 59262 tcttcatcttcttcatcgtc 59243
>gb|AC090877.4| Homo sapiens chromosome 15, clone RP11-758N13, complete sequence Length = 181460 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 478 acttctcccccactttttct 497 |||||||||||||||||||| Sbjct: 175606 acttctcccccactttttct 175625
>gb|AC090982.4| Homo sapiens chromosome 15, clone RP11-88O16, complete sequence Length = 195549 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 acttctcccccactttttct 497 |||||||||||||||||||| Sbjct: 105838 acttctcccccactttttct 105819
>gb|DQ315360.1| Arabidopsis thaliana RING E3 ligase protein mRNA, complete cds Length = 4878 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 catcttcttcatcgtcgtca 281 |||||||||||||||||||| Sbjct: 307 catcttcttcatcgtcgtca 288
>ref|NM_053474.1| Rattus norvegicus protein phosphatase 1, regulatory subunit 9B (Ppp1r9b), mRNA Length = 4505 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 tcttcatcttcttcatcgtc 277 |||||||||||||||||||| Sbjct: 1769 tcttcatcttcttcatcgtc 1750
>gb|AC148815.2| Medicago truncatula chromosome 2 BAC clone mth2-13k15, complete sequence Length = 126191 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 254 aacttcttcatcttcttcat 273 |||||||||||||||||||| Sbjct: 2404 aacttcttcatcttcttcat 2385
>ref|XM_626545.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd2_3580), partial mRNA Length = 1803 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 acttcttcatcttcttcatc 274 |||||||||||||||||||| Sbjct: 437 acttcttcatcttcttcatc 418
>ref|XM_625308.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd5_4600), partial mRNA Length = 735 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 cttcttcatcttcttcatcg 275 |||||||||||||||||||| Sbjct: 538 cttcttcatcttcttcatcg 519
>gb|AF303741.1|AF303741 Chilo iridescent virus complete genome Length = 212482 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 acttcttcatcttcttcatc 274 |||||||||||||||||||| Sbjct: 182974 acttcttcatcttcttcatc 182955
>gb|AF010465.1|AF010465 Rattus norvegicus B7.1 (B7.1) mRNA, complete cds Length = 1000 Score = 40.1 bits (20), Expect = 9.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 261 tcatcttcttcatcgtcgtcaaagtcatcgctgtcatcgc 300 ||||||||||||||| | ||| |||||||| |||||||| Sbjct: 798 tcatcttcttcatcgccatcaccgtcatcgccgtcatcgc 837
>gb|AY621434.1| HIV-1 isolate M13 envelope glycoprotein (env) gene, partial cds Length = 414 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 629 ataatctttaacaatcctca 648 |||||||||||||||||||| Sbjct: 238 ataatctttaacaatcctca 257
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 258 tcttcatcttcttcatcgtcgtca 281 ||||| |||||||||||||||||| Sbjct: 20761624 tcttcttcttcttcatcgtcgtca 20761601
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 248 tttggcaacttcttcatcttcttc 271 ||||||| |||||||||||||||| Sbjct: 36228760 tttggcaccttcttcatcttcttc 36228737
>gb|AF205261.1|AF205261 Filobasidiella neoformans var. neoformans strain NIH B3502, genomic sequence Length = 422 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 tcatcgtcgtcaaagtcatc 289 |||||||||||||||||||| Sbjct: 296 tcatcgtcgtcaaagtcatc 315
>gb|AC115598.2| Dictyostelium discoideum chromosome 2 map 581427-735498 strain AX4, complete sequence Length = 154071 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 251 ggcaacttcttcatcttcttcatc 274 |||| ||||||||||||||||||| Sbjct: 9046 ggcatcttcttcatcttcttcatc 9023
>ref|NM_214524.1| Strongylocentrotus purpuratus cyclin-dependent kinase 4 (cdk4), mRNA Length = 3388 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 tcttcatcttcttcatcgtc 277 |||||||||||||||||||| Sbjct: 1578 tcttcatcttcttcatcgtc 1559
>gb|AC104201.12| Mus musculus chromosome 19, clone RP24-531I1, complete sequence Length = 166165 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 491 tttttcttggtgctgcttcacttt 514 ||||||||| |||||||||||||| Sbjct: 11966 tttttcttgctgctgcttcacttt 11943
>gb|AE014847.1| Plasmodium falciparum 3D7 chromosome 12, section 4 of 9 of the complete sequence Length = 252650 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 acttcttcatcttcttcatc 274 |||||||||||||||||||| Sbjct: 187475 acttcttcatcttcttcatc 187456
>gb|AC007850.29|AC007850 Homo sapiens 3 BAC CTB-237N12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 157872 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 481 tctcccccactttttcttgg 500 |||||||||||||||||||| Sbjct: 92253 tctcccccactttttcttgg 92272
>gb|AF277988.1|AF277988 Caenorhabditis briggsae LIN-39 mRNA, complete cds Length = 931 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 tcatcttcttcatcgtcgtc 280 |||||||||||||||||||| Sbjct: 96 tcatcttcttcatcgtcgtc 115
>dbj|AP003240.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0406G08 Length = 144233 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 248 tttggcaacttcttcatcttcttc 271 ||||||| |||||||||||||||| Sbjct: 105773 tttggcaccttcttcatcttcttc 105750
>gb|AC149602.1| Mus musculus BAC clone RP24-116G21 from chromosome 8, complete sequence Length = 158424 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 643 tcctcattataatatctgag 662 |||||||||||||||||||| Sbjct: 17367 tcctcattataatatctgag 17348
>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2 Length = 2820462 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 acttcttcatcttcttcatc 274 |||||||||||||||||||| Sbjct: 444704 acttcttcatcttcttcatc 444685
>dbj|AP004674.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0681F05 Length = 144741 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 258 tcttcatcttcttcatcgtcgtca 281 ||||| |||||||||||||||||| Sbjct: 114374 tcttcttcttcttcatcgtcgtca 114351
>dbj|AK110147.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-161-E01, full insert sequence Length = 3748 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 264 tcttcttcatcgtcgtcaaagtcatcgc 291 ||||| ||||||||||||||||| |||| Sbjct: 2934 tcttcctcatcgtcgtcaaagtcgtcgc 2907
>ref|XM_306246.2| Anopheles gambiae str. PEST ENSANGP00000015460 (ENSANGG00000012971), partial mRNA Length = 2184 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 cttcttcatcttcttcatcg 275 |||||||||||||||||||| Sbjct: 214 cttcttcatcttcttcatcg 195
>dbj|AK071504.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023094A01, full insert sequence Length = 2479 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 258 tcttcatcttcttcatcgtcgtca 281 ||||| |||||||||||||||||| Sbjct: 899 tcttcttcttcttcatcgtcgtca 876
>ref|NM_208439.1| Eremothecium gossypii ABR139Wp (ABR139W), mRNA Length = 3813 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 cttcttcatcttcttcatcgtcgt 279 ||||||||||||||||||| |||| Sbjct: 2086 cttcttcatcttcttcatcttcgt 2063
>gb|AF193857.1|AF193857 Dictyostelium discoideum putative CMF receptor CMFR1 mRNA, complete cds Length = 1639 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 239 tttggcatctttggcaacttcttcatct 266 ||||||| |||||||||||| ||||||| Sbjct: 621 tttggcagctttggcaactttttcatct 594
>gb|BC079317.1| Rattus norvegicus similar to hypothetical protein FLJ25359, mRNA (cDNA clone MGC:94475 IMAGE:7135047), complete cds Length = 1919 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 tcatcgctgtcatcgctgtc 304 |||||||||||||||||||| Sbjct: 210 tcatcgctgtcatcgctgtc 229
>dbj|AK114958.1| Ciona intestinalis cDNA, clone:cieg024f24, full insert sequence Length = 1449 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 caacttcttcatcttcttca 272 |||||||||||||||||||| Sbjct: 288 caacttcttcatcttcttca 269
>gb|AF036382.1|AF036382 Fugu rubripes MLL (MLL) gene, complete cds Length = 32900 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 tcatcttcttcatcgtcgtc 280 |||||||||||||||||||| Sbjct: 17082 tcatcttcttcatcgtcgtc 17101
>gb|AC002365.1|AC002365 Homo sapiens chromosome X clone U177G4, U152H5, U168D5, 174A6, U172D6, and U186B3 from Xp22, complete sequence Length = 196542 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 459 agttttgccactgtactcca 478 |||||||||||||||||||| Sbjct: 103985 agttttgccactgtactcca 104004
>ref|NM_001017464.1| Rattus norvegicus similar to hypothetical protein FLJ25359 (RGD1311454), mRNA Length = 1919 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 tcatcgctgtcatcgctgtc 304 |||||||||||||||||||| Sbjct: 210 tcatcgctgtcatcgctgtc 229
>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome Length = 4096345 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 aacttcttcatcttcttcat 273 |||||||||||||||||||| Sbjct: 769093 aacttcttcatcttcttcat 769112
>emb|CT030233.6| Mouse DNA sequence from clone RP24-103C16 on chromosome 14, complete sequence Length = 216332 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 ttataccttgacatatattt 213 |||||||||||||||||||| Sbjct: 193535 ttataccttgacatatattt 193554
>emb|AJ251504.1|CAL251504 Candida albicans eng1 gene for endo-1,3-beta-glucanase Length = 4858 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 242 ggcatctttggcaacttcttcatc 265 ||||||||||| |||||||||||| Sbjct: 3236 ggcatctttggtaacttcttcatc 3213
>emb|AJ251464.1|CAL251464 Candida albicans eng1 gene for endo-1,3-beta-glucanase and pCa1 retrotransposon Length = 4872 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 242 ggcatctttggcaacttcttcatc 265 ||||||||||| |||||||||||| Sbjct: 3236 ggcatctttggtaacttcttcatc 3213
>gb|AF027181.1|AF027181 Rattus norvegicus neurabin II gene, complete cds Length = 3233 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 tcttcatcttcttcatcgtc 277 |||||||||||||||||||| Sbjct: 1455 tcttcatcttcttcatcgtc 1436
>gb|U88622.1|RNU88622 Rattus norvegicus CD80 mRNA, complete cds Length = 966 Score = 40.1 bits (20), Expect = 9.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 261 tcatcttcttcatcgtcgtcaaagtcatcgctgtcatcgc 300 ||||||||||||||| | ||| |||||||| |||||||| Sbjct: 791 tcatcttcttcatcgccatcaccgtcatcgccgtcatcgc 830
>emb|CT033769.2| Medicago truncatula chromosome 5 clone mte1-54l11, COMPLETE SEQUENCE Length = 127487 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 caaagggacagacacatggt 146 |||||||||||||||||||| Sbjct: 63358 caaagggacagacacatggt 63339 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 caaagggacagacacatggt 146 |||||||||||||||||||| Sbjct: 57439 caaagggacagacacatggt 57420
>gb|AF016252.1|AF016252 Rattus norvegicus Spinophilin mRNA, complete cds Length = 4505 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 tcttcatcttcttcatcgtc 277 |||||||||||||||||||| Sbjct: 1769 tcttcatcttcttcatcgtc 1750
>gb|U10925.1|RNU10925 Rattus norvegicus NEDH B7-1 (B7-1) mRNA, partial cds Length = 1152 Score = 40.1 bits (20), Expect = 9.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 261 tcatcttcttcatcgtcgtcaaagtcatcgctgtcatcgc 300 ||||||||||||||| | ||| |||||||| |||||||| Sbjct: 1072 tcatcttcttcatcgccatcaccgtcatcgccgtcatcgc 1111
>dbj|AP006852.1| Candida albicans genomic DNA, chromosome 7, complete sequence Length = 949626 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 acttcttcatcttcttcatc 274 |||||||||||||||||||| Sbjct: 838008 acttcttcatcttcttcatc 838027
>dbj|AP008952.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT45D07, TM0932b, complete sequence Length = 74001 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 acttcttcatcttcttcatc 274 |||||||||||||||||||| Sbjct: 15582 acttcttcatcttcttcatc 15601
>gb|AE016815.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome II, complete sequence Length = 867699 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 cttcttcatcttcttcatcgtcgt 279 ||||||||||||||||||| |||| Sbjct: 660229 cttcttcatcttcttcatcttcgt 660206
>gb|U05593.1|RRU05593 Rattus norvegicus B7-1 mRNA, complete cds Length = 1030 Score = 40.1 bits (20), Expect = 9.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 261 tcatcttcttcatcgtcgtcaaagtcatcgctgtcatcgc 300 ||||||||||||||| | ||| |||||||| |||||||| Sbjct: 809 tcatcttcttcatcgccatcaccgtcatcgccgtcatcgc 848
>emb|AL672089.17| Mouse DNA sequence from clone RP23-295D9 on chromosome X, complete sequence Length = 215390 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 agggacagacacatggtgaa 149 |||||||||||||||||||| Sbjct: 56915 agggacagacacatggtgaa 56896
>gb|AC024163.3| Homo sapiens chromosome 3 clone RP11-326O24 map 3p, complete sequence Length = 176647 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 481 tctcccccactttttcttgg 500 |||||||||||||||||||| Sbjct: 106021 tctcccccactttttcttgg 106040
>gb|L22300.1|IRIZFPA Chilo iridescent virus type 6 zinc finger protein and non-histone chromosomal high mobility group protein homolog genes, complete cds Length = 5702 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 acttcttcatcttcttcatc 274 |||||||||||||||||||| Sbjct: 3833 acttcttcatcttcttcatc 3814 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,730,822 Number of Sequences: 3902068 Number of extensions: 6730822 Number of successful extensions: 189243 Number of sequences better than 10.0: 228 Number of HSP's better than 10.0 without gapping: 227 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 188056 Number of HSP's gapped (non-prelim): 1183 length of query: 694 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 671 effective length of database: 17,143,297,704 effective search space: 11503152759384 effective search space used: 11503152759384 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
