ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd16o03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 111 3e-21
2dbj|AP004691.2| Oryza sativa (japonica cultivar-group) genomic D... 111 3e-21
3ref|XM_482324.1| Oryza sativa (japonica cultivar-group), mRNA 107 4e-20
4gb|AY355489.1| Canis familiaris isolate cOR10Q3 olfactory recept... 48 0.034
5ref|XM_540563.2| PREDICTED: Canis familiaris cOR10Q3 olfactory r... 48 0.034
6gb|AC095036.2| Homo sapiens chromosome 1 clone RP11-320E2, compl... 46 0.13
7gb|AC089995.1|AC089995 Caenorhabditis briggsae cosmid CB035H18, ... 46 0.13
8gb|AC102198.9| Mus musculus chromosome 15, clone RP24-499H13, co... 46 0.13
9gb|AC159502.12| Mus musculus 10 BAC RP23-113B7 (Roswell Park Can... 44 0.53
10gb|CP000107.1| Ehrlichia canis str. Jake, complete genome 44 0.53
11gb|DQ366734.1| Uncultured Prochlorococcus marinus clone HOT0M-1A... 44 0.53
12gb|DQ366729.1| Uncultured Prochlorococcus marinus clone HF10-88H... 44 0.53
13emb|Z68004.1|CEF47B10 Caenorhabditis elegans Cosmid F47B10, comp... 42 2.1
14dbj|BA000026.2| Mycoplasma penetrans HF-2 DNA, complete genome 42 2.1
15ref|NM_124985.3| Arabidopsis thaliana HSP81-2; ATP binding / unf... 40 8.3
16gb|AC114641.6| Mus musculus chromosome 3, clone RP24-126N3, comp... 40 8.3
17gb|AC125068.4| Mus musculus chromosome UNKNOWN clone RP23-432M17... 40 8.3
18ref|XM_629861.1| Dictyostelium discoideum hypothetical protein (... 40 8.3
19gb|AC164085.3| Mus musculus BAC clone RP23-205G24 from chromosom... 40 8.3
20gb|AC123873.4| Mus musculus chromosome UNKNOWN clone RP23-261G21... 40 8.3
21gb|AF033802.1|AH006117S1 Tilapia mossambica insulin-like growth ... 40 8.3
22gb|AC125178.3| Mus musculus chromosome UNKNOWN clone RP23-319L16... 40 8.3
23gb|AC140234.4| Mus musculus chromosome UNKNOWN clone RP23-470P12... 40 8.3
24gb|AC125052.4| Mus musculus BAC clone RP23-388L12 from chromosom... 40 8.3
25gb|AC124377.4| Mus musculus BAC clone RP24-396N12 from chromosom... 40 8.3
26gb|AY391253.1| Halteria grandinella heat shock protein 90 gene, ... 40 8.3
27gb|AC164084.5| Mus musculus BAC clone RP23-15P15 from chromosome... 40 8.3
28gb|AC165294.4| Mus musculus BAC clone RP23-115J11 from chromosom... 40 8.3
29gb|AC124348.5| Mus musculus BAC clone RP24-462O9 from chromosome... 40 8.3
30gb|AC140444.2| Mus musculus BAC clone RP23-57N5 from chromosome ... 40 8.3
31gb|AC134447.2| Mus musculus BAC clone RP24-186D1 from chromosome... 40 8.3
32gb|AC125326.4| Mus musculus BAC clone RP23-320H13 from chromosom... 40 8.3
33gb|AC132950.3| Mus musculus BAC clone RP23-183C6 from chromosome... 40 8.3
34gb|AC132406.4| Mus musculus BAC clone RP23-340E1 from chromosome... 40 8.3
35ref|XM_731196.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 8.3
36gb|AC149307.17| Medicago truncatula clone mth2-91a15, complete s... 40 8.3
37gb|AC135801.24| Medicago truncatula clone mth2-23o16, complete s... 40 8.3
38gb|AC140033.3| Medicago truncatula clone mth2-24f11, complete se... 40 8.3
39gb|AC140025.7| Medicago truncatula clone mth2-11i16, complete se... 40 8.3
40gb|AE014823.1| Plasmodium falciparum 3D7 chromosome 14 section 8... 40 8.3
41emb|AL162430.15| Human DNA sequence from clone RP11-296A18 on ch... 40 8.3
42gb|BT000717.1| Arabidopsis thaliana clone RAFL09-76-I24 (R19621)... 40 8.3
43gb|AY064070.2| Arabidopsis thaliana At5g56030 mRNA sequence 40 8.3
44gb|AC141645.4| Mus musculus BAC clone RP23-109K22 from chromosom... 40 8.3
45gb|AC124599.4| Mus musculus chromosome UL clone RP23-24D13, comp... 40 8.3
46emb|BX510656.7| Zebrafish DNA sequence from clone CH211-132N7 in... 40 8.3
47gb|AC116733.19| Mus musculus chromosome 3, clone RP23-349K2, com... 40 8.3
48gb|AY128805.1| Arabidopsis thaliana heat shock protein 81-2 (At5... 40 8.3
49dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, comple... 40 8.3
50gb|AY062750.1| Arabidopsis thaliana HEAT SHOCK PROTEIN 81-2 (HSP... 40 8.3
51gb|AC092752.2| Genomic sequence for Mus musculus, clone RP23-51O... 40 8.3
52emb|BX548044.10| Zebrafish DNA sequence from clone DKEY-10B15 in... 40 8.3
53emb|BX649412.8| Zebrafish DNA sequence from clone DKEY-116G10 in... 40 8.3
54emb|BX323874.4| Zebrafish DNA sequence from clone DKEY-104N21 in... 40 8.3
55emb|BX571853.4| Zebrafish DNA sequence from clone DKEY-29H14 in ... 40 8.3
56gb|AC140325.3| Mus musculus BAC clone RP23-403K16 from chromosom... 40 8.3
57ref|NG_004245.1| Homo sapiens olfactory receptor, family 10, sub... 40 8.3
58tpg|BK004737.1| TPA: TPA_exp: Homo sapiens olfactory receptor OR... 40 8.3
59gb|DP000029.1| Cercopithecus aethiops target 1 genomic scaffold 40 8.3
60gb|AC129176.6| Mus musculus BAC clone RP23-124D10 from chromosom... 40 8.3
61gb|AC010896.15| Homo sapiens BAC clone RP11-499P9 from 2, comple... 40 8.3
62ref|XM_577533.1| PREDICTED: Rattus norvegicus similar to MAP/mic... 40 8.3
63emb|BX470223.14| Zebrafish DNA sequence from clone DKEY-45P9 in ... 40 8.3
64gb|BT002535.1| Arabidopsis thaliana Unknown protein mRNA, comple... 40 8.3
65gb|AC114398.3| Homo sapiens chromosome 3 clone RP11-495E23, comp... 40 8.3
66dbj|AB011476.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 8.3
67gb|AY110758.1| Zea mays CL17045_3 mRNA sequence 40 8.3
68dbj|AP000640.5| Homo sapiens genomic DNA, chromosome 11 clone:CM... 40 8.3
69gb|BT001944.1| Arabidopsis thaliana clone C105057 putative heat-... 40 8.3
70gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome 40 8.3
71gb|AC148327.3| Mus musculus BAC clone RP24-322E6 from 5, complet... 40 8.3
72gb|AC140293.4| Mus musculus BAC clone RP24-328A10 from 13, compl... 40 8.3
73gb|AC134841.4| Mus musculus BAC clone RP24-372K3 from 5, complet... 40 8.3
74gb|AC125197.4| Mus musculus BAC clone RP23-249A1 from 5, complet... 40 8.3
75gb|AC134584.5| Mus musculus BAC clone RP23-299M6 from 5, complet... 40 8.3
76gb|AC138724.3| Cercopithecus aethiops clone CH252-200P12, comple... 40 8.3
77emb|AL663056.11| Mouse DNA sequence from clone RP23-24O15 on chr... 40 8.3
78emb|AL355887.4|CNS05TCY Human chromosome 14 DNA sequence BAC R-1... 40 8.3
79emb|AL161713.4|CNS01RHE Human chromosome 14 DNA sequence BAC R-2... 40 8.3
80gb|AC124606.3| Mus musculus BAC clone RP23-82D2 from chromosome ... 40 8.3
81gb|J04053.1|SPESAP S.peregrina sapecin mRNA, complete cds 40 8.3 
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  111 bits (56), Expect = 3e-21
 Identities = 89/100 (89%)
 Strand = Plus / Minus

                                                                            
Query: 431      ataagtttagtgtcatcttcagtccacccatcaactgactttattgtcacaataaccata 490
                |||||||||||||||||||||||||||||||||||||   ||||||||| ||||| || |
Sbjct: 19451976 ataagtttagtgtcatcttcagtccacccatcaactgcacttattgtcataataatcaga 19451917

                                                        
Query: 491      tcagctcctagtgcaggagtctctgatcgttctacacctg 530
                |||||||| ||||||| ||  ||||||||||| |||||||
Sbjct: 19451916 tcagctcccagtgcagcagcttctgatcgttccacacctg 19451877



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                    
Query: 431      ataagtttagtgtcatcttcagtccacccatcaact 466
                ||||||||||| ||||||||||||||| ||||||||
Sbjct: 19464481 ataagtttagtatcatcttcagtccactcatcaact 19464446



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                      
Query: 293      tcattttccaatgcagaatttgttgaatatgttgctca 330
                ||||||||||||||| |||||| |||||||| ||||||
Sbjct: 19452728 tcattttccaatgcaaaatttgctgaatatgctgctca 19452691
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>dbj|AP004691.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0453D01
          Length = 147461

 Score =  111 bits (56), Expect = 3e-21
 Identities = 89/100 (89%)
 Strand = Plus / Minus

                                                                         
Query: 431   ataagtttagtgtcatcttcagtccacccatcaactgactttattgtcacaataaccata 490
             |||||||||||||||||||||||||||||||||||||   ||||||||| ||||| || |
Sbjct: 46733 ataagtttagtgtcatcttcagtccacccatcaactgcacttattgtcataataatcaga 46674

                                                     
Query: 491   tcagctcctagtgcaggagtctctgatcgttctacacctg 530
             |||||||| ||||||| ||  ||||||||||| |||||||
Sbjct: 46673 tcagctcccagtgcagcagcttctgatcgttccacacctg 46634



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                 
Query: 431   ataagtttagtgtcatcttcagtccacccatcaact 466
             ||||||||||| ||||||||||||||| ||||||||
Sbjct: 59238 ataagtttagtatcatcttcagtccactcatcaact 59203



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                   
Query: 293   tcattttccaatgcagaatttgttgaatatgttgctca 330
             ||||||||||||||| |||||| |||||||| ||||||
Sbjct: 47485 tcattttccaatgcaaaatttgctgaatatgctgctca 47448
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>ref|XM_482324.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1659

 Score =  107 bits (54), Expect = 4e-20
 Identities = 87/98 (88%)
 Strand = Plus / Minus

                                                                        
Query: 431  ataagtttagtgtcatcttcagtccacccatcaactgactttattgtcacaataaccata 490
            |||||||||||||||||||||||||||||||||||||   ||||||||| ||||| || |
Sbjct: 1217 ataagtttagtgtcatcttcagtccacccatcaactgcacttattgtcataataatcaga 1158

                                                  
Query: 491  tcagctcctagtgcaggagtctctgatcgttctacacc 528
            |||||||| ||||||| ||  ||||||||||| |||||
Sbjct: 1157 tcagctcccagtgcagcagcttctgatcgttccacacc 1120



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 293  tcattttccaatgcagaatttgttgaatatgttgctca 330
            ||||||||||||||| |||||| |||||||| ||||||
Sbjct: 1659 tcattttccaatgcaaaatttgctgaatatgctgctca 1622
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>gb|AY355489.1| Canis familiaris isolate cOR10Q3 olfactory receptor family 10
           subfamily Q-like gene, partial sequence
          Length = 616

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 106 aagggcagtgacaacagtaatcccagcc 133
           ||||||||||||||||| ||||||||||
Sbjct: 296 aagggcagtgacaacaggaatcccagcc 323
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>ref|XM_540563.2| PREDICTED: Canis familiaris cOR10Q3 olfactory receptor family 10
           subfamily Q-like (cOR10Q3), mRNA
          Length = 1002

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 106 aagggcagtgacaacagtaatcccagcc 133
           ||||||||||||||||| ||||||||||
Sbjct: 479 aagggcagtgacaacaggaatcccagcc 452
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>gb|AC095036.2| Homo sapiens chromosome 1 clone RP11-320E2, complete sequence
          Length = 191499

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 374    caacaaaattgttgagaaaatga 396
              |||||||||||||||||||||||
Sbjct: 176606 caacaaaattgttgagaaaatga 176584
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>gb|AC089995.1|AC089995 Caenorhabditis briggsae cosmid CB035H18, complete sequence
          Length = 79459

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 578   ccattattcaatttacaaaatta 600
             |||||||||||||||||||||||
Sbjct: 61735 ccattattcaatttacaaaatta 61713
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>gb|AC102198.9| Mus musculus chromosome 15, clone RP24-499H13, complete sequence
          Length = 139134

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 319   atatgttgctcaaacagaaggcatgca 345
             |||||||||||| ||||||||||||||
Sbjct: 57881 atatgttgctcagacagaaggcatgca 57855
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>gb|AC159502.12| Mus musculus 10 BAC RP23-113B7 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 226276

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 300    ccaatgcagaatttgttgaata 321
              ||||||||||||||||||||||
Sbjct: 123578 ccaatgcagaatttgttgaata 123599
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>gb|CP000107.1| Ehrlichia canis str. Jake, complete genome
          Length = 1315030

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 301    caatgcagaatttgttgaatat 322
              ||||||||||||||||||||||
Sbjct: 628052 caatgcagaatttgttgaatat 628073
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>gb|DQ366734.1| Uncultured Prochlorococcus marinus clone HOT0M-1A11 genomic sequence
          Length = 23461

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 222  tgccactgcatatgctgctcaa 243
            ||||||||||||||||||||||
Sbjct: 3401 tgccactgcatatgctgctcaa 3422
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>gb|DQ366729.1| Uncultured Prochlorococcus marinus clone HF10-88H9 genomic sequence
          Length = 34302

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 222   tgccactgcatatgctgctcaa 243
             ||||||||||||||||||||||
Sbjct: 26007 tgccactgcatatgctgctcaa 25986
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>emb|Z68004.1|CEF47B10 Caenorhabditis elegans Cosmid F47B10, complete sequence
          Length = 30961

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 581   ttattcaatttacaaaattaa 601
             |||||||||||||||||||||
Sbjct: 17263 ttattcaatttacaaaattaa 17243
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>dbj|BA000026.2| Mycoplasma penetrans HF-2 DNA, complete genome
          Length = 1358633

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 302    aatgcagaatttgttgaatatgttg 326
              ||||||||||||||||||| |||||
Sbjct: 351221 aatgcagaatttgttgaatctgttg 351197
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>ref|NM_124985.3| Arabidopsis thaliana HSP81-2; ATP binding / unfolded protein
           binding AT5G56030 (HSP81-2) mRNA, complete cds
          Length = 2408

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 558 caagactaacaacaccatcaccattatt 585
           |||||||||||||||| | |||||||||
Sbjct: 301 caagactaacaacaccttgaccattatt 328
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>gb|AC114641.6| Mus musculus chromosome 3, clone RP24-126N3, complete sequence
          Length = 86553

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 171   tttcattgcttgttctttgg 190
             ||||||||||||||||||||
Sbjct: 73061 tttcattgcttgttctttgg 73080
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>gb|AC125068.4| Mus musculus chromosome UNKNOWN clone RP23-432M17, complete sequence
          Length = 205831

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 369   atcatcaacaaaattgttga 388
             ||||||||||||||||||||
Sbjct: 14963 atcatcaacaaaattgttga 14944
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>ref|XM_629861.1| Dictyostelium discoideum hypothetical protein (DDB0184259), partial
           mRNA
          Length = 1569

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 565 aacaacaccatcaccattat 584
           ||||||||||||||||||||
Sbjct: 426 aacaacaccatcaccattat 445
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>gb|AC164085.3| Mus musculus BAC clone RP23-205G24 from chromosome 5, complete sequence
          Length = 235124

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 369    atcatcaacaaaattgttga 388
              ||||||||||||||||||||
Sbjct: 108365 atcatcaacaaaattgttga 108384
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>gb|AC123873.4| Mus musculus chromosome UNKNOWN clone RP23-261G21, complete sequence
          Length = 195405

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 369    atcatcaacaaaattgttga 388
              ||||||||||||||||||||
Sbjct: 114208 atcatcaacaaaattgttga 114189
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>gb|AF033802.1|AH006117S1 Tilapia mossambica insulin-like growth factor II (IGF-II) gene, exons
            1 and 2
          Length = 6886

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 176  ttgcttgttctttggttacc 195
            ||||||||||||||||||||
Sbjct: 5694 ttgcttgttctttggttacc 5675
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>gb|AC125178.3| Mus musculus chromosome UNKNOWN clone RP23-319L16, complete sequence
          Length = 184189

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 369   atcatcaacaaaattgttga 388
             ||||||||||||||||||||
Sbjct: 25762 atcatcaacaaaattgttga 25743
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>gb|AC140234.4| Mus musculus chromosome UNKNOWN clone RP23-470P12, complete sequence
          Length = 203294

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 369   atcatcaacaaaattgttga 388
             ||||||||||||||||||||
Sbjct: 44392 atcatcaacaaaattgttga 44411
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>gb|AC125052.4| Mus musculus BAC clone RP23-388L12 from chromosome 5, complete sequence
          Length = 217001

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 369   atcatcaacaaaattgttga 388
             ||||||||||||||||||||
Sbjct: 37751 atcatcaacaaaattgttga 37770
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>gb|AC124377.4| Mus musculus BAC clone RP24-396N12 from chromosome 5, complete
            sequence
          Length = 170401

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 369  atcatcaacaaaattgttga 388
            ||||||||||||||||||||
Sbjct: 8785 atcatcaacaaaattgttga 8766
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>gb|AY391253.1| Halteria grandinella heat shock protein 90 gene, partial cds
          Length = 1686

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 558 caagactaacaacaccatcaccat 581
           |||||| |||||||||||||||||
Sbjct: 132 caagaccaacaacaccatcaccat 155
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>gb|AC164084.5| Mus musculus BAC clone RP23-15P15 from chromosome 5, complete sequence
          Length = 199368

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 369    atcatcaacaaaattgttga 388
              ||||||||||||||||||||
Sbjct: 108364 atcatcaacaaaattgttga 108383
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>gb|AC165294.4| Mus musculus BAC clone RP23-115J11 from chromosome 5, complete sequence
          Length = 205776

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 369    atcatcaacaaaattgttga 388
              ||||||||||||||||||||
Sbjct: 175297 atcatcaacaaaattgttga 175316
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>gb|AC124348.5| Mus musculus BAC clone RP24-462O9 from chromosome 9, complete sequence
          Length = 187568

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 589   tttacaaaattaaatatact 608
             ||||||||||||||||||||
Sbjct: 80628 tttacaaaattaaatatact 80609
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>gb|AC140444.2| Mus musculus BAC clone RP23-57N5 from chromosome 5, complete sequence
          Length = 174306

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 369   atcatcaacaaaattgttga 388
             ||||||||||||||||||||
Sbjct: 86639 atcatcaacaaaattgttga 86658
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>gb|AC134447.2| Mus musculus BAC clone RP24-186D1 from chromosome 18, complete sequence
          Length = 179514

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 437    ttagtgtcatcttcagtcca 456
              ||||||||||||||||||||
Sbjct: 133066 ttagtgtcatcttcagtcca 133085
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>gb|AC125326.4| Mus musculus BAC clone RP23-320H13 from chromosome 5, complete sequence
          Length = 216667

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 369    atcatcaacaaaattgttga 388
              ||||||||||||||||||||
Sbjct: 103270 atcatcaacaaaattgttga 103251
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>gb|AC132950.3| Mus musculus BAC clone RP23-183C6 from chromosome 5, complete sequence
          Length = 217825

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 369    atcatcaacaaaattgttga 388
              ||||||||||||||||||||
Sbjct: 171789 atcatcaacaaaattgttga 171770
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>gb|AC132406.4| Mus musculus BAC clone RP23-340E1 from chromosome 9, complete sequence
          Length = 222617

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 589    tttacaaaattaaatatact 608
              ||||||||||||||||||||
Sbjct: 185492 tttacaaaattaaatatact 185511
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>ref|XM_731196.1| Plasmodium chabaudi chabaudi hypothetical protein (PC403453.00.0)
           partial mRNA
          Length = 477

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 293 tcattttccaatgcagaatt 312
           ||||||||||||||||||||
Sbjct: 191 tcattttccaatgcagaatt 172
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>gb|AC149307.17| Medicago truncatula clone mth2-91a15, complete sequence
          Length = 136553

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 456   acccatcaactgactttattgtca 479
             ||||||||||||||||||| ||||
Sbjct: 56099 acccatcaactgactttatagtca 56122
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>gb|AC135801.24| Medicago truncatula clone mth2-23o16, complete sequence
          Length = 115452

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 559    aagactaacaacaccatcac 578
              ||||||||||||||||||||
Sbjct: 102861 aagactaacaacaccatcac 102842
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>gb|AC140033.3| Medicago truncatula clone mth2-24f11, complete sequence
          Length = 120384

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 584    ttcaatttacaaaattaaat 603
              ||||||||||||||||||||
Sbjct: 109716 ttcaatttacaaaattaaat 109697
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>gb|AC140025.7| Medicago truncatula clone mth2-11i16, complete sequence
          Length = 130592

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 584   ttcaatttacaaaattaaat 603
             ||||||||||||||||||||
Sbjct: 59169 ttcaatttacaaaattaaat 59150
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>gb|AE014823.1| Plasmodium falciparum 3D7 chromosome 14 section 8 of 13 of the complete
             sequence
          Length = 249943

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    atagcaaatataatacacaa 87
             ||||||||||||||||||||
Sbjct: 73109 atagcaaatataatacacaa 73090
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>emb|AL162430.15| Human DNA sequence from clone RP11-296A18 on chromosome 1 Contains for
              novel genes, a cofilin 1 (non-muscle) (CFL1) pseudogene,
              the RNF11 gene for ring finger protein 11, a ribosomal
              protein S2 (RPS2) pseudogene and the 3' end of the C1orf34
              gene for chromosome 1 open reading frame 34, complete
              sequence
          Length = 211791

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 305    gcagaatttgttgaatatgt 324
              ||||||||||||||||||||
Sbjct: 101456 gcagaatttgttgaatatgt 101437
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>gb|BT000717.1| Arabidopsis thaliana clone RAFL09-76-I24 (R19621) putative heat
           shock protein 81-2 (HSP81-2) (At5g56030) mRNA, complete
           cds
          Length = 2384

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 558 caagactaacaacaccatcaccattatt 585
           |||||||||||||||| | |||||||||
Sbjct: 299 caagactaacaacaccttgaccattatt 326
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>gb|AY064070.2| Arabidopsis thaliana At5g56030 mRNA sequence
          Length = 1690

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 558 caagactaacaacaccatcaccattatt 585
           |||||||||||||||| | |||||||||
Sbjct: 303 caagactaacaacaccttgaccattatt 330
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>gb|AC141645.4| Mus musculus BAC clone RP23-109K22 from chromosome ul, complete
             sequence
          Length = 209250

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 369   atcatcaacaaaattgttga 388
             ||||||||||||||||||||
Sbjct: 43623 atcatcaacaaaattgttga 43604
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>gb|AC124599.4| Mus musculus chromosome UL clone RP23-24D13, complete sequence
          Length = 208587

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 369    atcatcaacaaaattgttga 388
              ||||||||||||||||||||
Sbjct: 109171 atcatcaacaaaattgttga 109190
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>emb|BX510656.7| Zebrafish DNA sequence from clone CH211-132N7 in linkage group 7,
              complete sequence
          Length = 174960

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 587    aatttacaaaattaaatata 606
              ||||||||||||||||||||
Sbjct: 165476 aatttacaaaattaaatata 165495
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>gb|AC116733.19| Mus musculus chromosome 3, clone RP23-349K2, complete sequence
          Length = 209244

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 171    tttcattgcttgttctttgg 190
              ||||||||||||||||||||
Sbjct: 183078 tttcattgcttgttctttgg 183059
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>gb|AY128805.1| Arabidopsis thaliana heat shock protein 81-2 (At5g56030) mRNA,
           complete cds
          Length = 2261

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 558 caagactaacaacaccatcaccattatt 585
           |||||||||||||||| | |||||||||
Sbjct: 210 caagactaacaacaccttgaccattatt 237
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>dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, complete genome
          Length = 2685015

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 315     ttgaatatgttgctcaaaca 334
               ||||||||||||||||||||
Sbjct: 1662515 ttgaatatgttgctcaaaca 1662496
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>gb|AY062750.1| Arabidopsis thaliana HEAT SHOCK PROTEIN 81-2 (HSP81-2) (MDA7.7)
           mRNA, complete cds
          Length = 2382

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 558 caagactaacaacaccatcaccattatt 585
           |||||||||||||||| | |||||||||
Sbjct: 296 caagactaacaacaccttgaccattatt 323
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>gb|AC092752.2| Genomic sequence for Mus musculus, clone RP23-51O3, complete sequence
          Length = 226416

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 165   gttcaatttcattgcttgtt 184
             ||||||||||||||||||||
Sbjct: 39238 gttcaatttcattgcttgtt 39219
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>emb|BX548044.10| Zebrafish DNA sequence from clone DKEY-10B15 in linkage group 10,
              complete sequence
          Length = 250011

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 463    aactgactttattgtcacaa 482
              ||||||||||||||||||||
Sbjct: 193060 aactgactttattgtcacaa 193079
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>emb|BX649412.8| Zebrafish DNA sequence from clone DKEY-116G10 in linkage group 1,
             complete sequence
          Length = 78932

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 590   ttacaaaattaaatatacta 609
             ||||||||||||||||||||
Sbjct: 70146 ttacaaaattaaatatacta 70127
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>emb|BX323874.4| Zebrafish DNA sequence from clone DKEY-104N21 in linkage group 16,
             complete sequence
          Length = 256605

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 69    tagcaaatataatacacaac 88
             ||||||||||||||||||||
Sbjct: 70636 tagcaaatataatacacaac 70655
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>emb|BX571853.4| Zebrafish DNA sequence from clone DKEY-29H14 in linkage group 16,
             complete sequence
          Length = 191052

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 69    tagcaaatataatacacaac 88
             ||||||||||||||||||||
Sbjct: 75888 tagcaaatataatacacaac 75907
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>gb|AC140325.3| Mus musculus BAC clone RP23-403K16 from chromosome unknown, complete
              sequence
          Length = 195993

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 369    atcatcaacaaaattgttga 388
              ||||||||||||||||||||
Sbjct: 117871 atcatcaacaaaattgttga 117890
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>ref|NG_004245.1| Homo sapiens olfactory receptor, family 10, subfamily Y, member 1
           pseudogene (OR10Y1P) on chromosome 11
          Length = 1174

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 111 cagtgacaacagtaatcccagcct 134
           |||||||||||| |||||||||||
Sbjct: 575 cagtgacaacaggaatcccagcct 552
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>tpg|BK004737.1| TPA: TPA_exp: Homo sapiens olfactory receptor OR11-254 pseudogene,
           complete sequence
          Length = 962

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 111 cagtgacaacagtaatcccagcct 134
           |||||||||||| |||||||||||
Sbjct: 502 cagtgacaacaggaatcccagcct 479
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>gb|DP000029.1| Cercopithecus aethiops target 1 genomic scaffold
          Length = 1825024

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 437    ttagtgtcatcttcagtcca 456
              ||||||||||||||||||||
Sbjct: 551772 ttagtgtcatcttcagtcca 551791
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>gb|AC129176.6| Mus musculus BAC clone RP23-124D10 from chromosome unknown, complete
              sequence
          Length = 211031

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 176    ttgcttgttctttggttacc 195
              ||||||||||||||||||||
Sbjct: 180107 ttgcttgttctttggttacc 180126
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>gb|AC010896.15| Homo sapiens BAC clone RP11-499P9 from 2, complete sequence
          Length = 188780

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 154    cagcaaaatgggttcaattt 173
              ||||||||||||||||||||
Sbjct: 156888 cagcaaaatgggttcaattt 156907
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>ref|XM_577533.1| PREDICTED: Rattus norvegicus similar to MAP/microtubule
            affinity-regulating kinase 2 isoform a (LOC502093), mRNA
          Length = 2841

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 325  tgctcaaacagaaggcatgc 344
            ||||||||||||||||||||
Sbjct: 1202 tgctcaaacagaaggcatgc 1221
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>emb|BX470223.14| Zebrafish DNA sequence from clone DKEY-45P9 in linkage group 10, complete
              sequence
          Length = 247644

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 463    aactgactttattgtcacaa 482
              ||||||||||||||||||||
Sbjct: 138237 aactgactttattgtcacaa 138218
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>gb|BT002535.1| Arabidopsis thaliana Unknown protein mRNA, complete cds
          Length = 2302

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 558 caagactaacaacaccatcaccattatt 585
           |||||||||||||||| | |||||||||
Sbjct: 299 caagactaacaacaccttgaccattatt 326
to top
>gb|AC114398.3| Homo sapiens chromosome 3 clone RP11-495E23, complete sequence
          Length = 233454

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 561   gactaacaacaccatcacca 580
             ||||||||||||||||||||
Sbjct: 87377 gactaacaacaccatcacca 87396
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>dbj|AB011476.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MDA7
          Length = 82033

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 558   caagactaacaacaccatcaccattatt 585
             |||||||||||||||| | |||||||||
Sbjct: 21757 caagactaacaacaccttgaccattatt 21784
to top
>gb|AY110758.1| Zea mays CL17045_3 mRNA sequence
          Length = 683

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 431 ataagtttagtgtcatcttcagtccacccatcaact 466
           ||||||||||||||| | | |||||| |||||||||
Sbjct: 474 ataagtttagtgtcagcattagtccatccatcaact 509
to top
>dbj|AP000640.5| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-26D16, complete
             sequence
          Length = 156734

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 111   cagtgacaacagtaatcccagcct 134
             |||||||||||| |||||||||||
Sbjct: 68301 cagtgacaacaggaatcccagcct 68278
to top
>gb|BT001944.1| Arabidopsis thaliana clone C105057 putative heat-shock protein
           HSP81-2 (At5g56030) mRNA, complete cds
          Length = 2131

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 558 caagactaacaacaccatcaccattatt 585
           |||||||||||||||| | |||||||||
Sbjct: 210 caagactaacaacaccttgaccattatt 237
to top
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome
          Length = 5411809

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 470     tttattgtcacaataaccat 489
               ||||||||||||||||||||
Sbjct: 1236700 tttattgtcacaataaccat 1236719
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>gb|AC148327.3| Mus musculus BAC clone RP24-322E6 from 5, complete sequence
          Length = 186474

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 369    atcatcaacaaaattgttga 388
              ||||||||||||||||||||
Sbjct: 122345 atcatcaacaaaattgttga 122364
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>gb|AC140293.4| Mus musculus BAC clone RP24-328A10 from 13, complete sequence
          Length = 188473

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 583    attcaatttacaaaattaaatata 606
              |||||||||| |||||||||||||
Sbjct: 126444 attcaatttataaaattaaatata 126421
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>gb|AC134841.4| Mus musculus BAC clone RP24-372K3 from 5, complete sequence
          Length = 159033

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 369    atcatcaacaaaattgttga 388
              ||||||||||||||||||||
Sbjct: 158195 atcatcaacaaaattgttga 158214
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>gb|AC125197.4| Mus musculus BAC clone RP23-249A1 from 5, complete sequence
          Length = 183430

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 369   atcatcaacaaaattgttga 388
             ||||||||||||||||||||
Sbjct: 14957 atcatcaacaaaattgttga 14938
to top
>gb|AC134584.5| Mus musculus BAC clone RP23-299M6 from 5, complete sequence
          Length = 212518

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 369   atcatcaacaaaattgttga 388
             ||||||||||||||||||||
Sbjct: 96474 atcatcaacaaaattgttga 96455
to top
>gb|AC138724.3| Cercopithecus aethiops clone CH252-200P12, complete sequence
          Length = 173770

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 437   ttagtgtcatcttcagtcca 456
             ||||||||||||||||||||
Sbjct: 24639 ttagtgtcatcttcagtcca 24658
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>emb|AL663056.11| Mouse DNA sequence from clone RP23-24O15 on chromosome X, complete
             sequence
          Length = 197729

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 375   aacaaaattgttgagaaaat 394
             ||||||||||||||||||||
Sbjct: 84267 aacaaaattgttgagaaaat 84248
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>emb|AL355887.4|CNS05TCY Human chromosome 14 DNA sequence BAC R-179O11 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 159183

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 378    aaaattgttgagaaaatgaa 397
              ||||||||||||||||||||
Sbjct: 151559 aaaattgttgagaaaatgaa 151540
to top
>emb|AL161713.4|CNS01RHE Human chromosome 14 DNA sequence BAC R-22K10 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 157383

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 378    aaaattgttgagaaaatgaa 397
              ||||||||||||||||||||
Sbjct: 155452 aaaattgttgagaaaatgaa 155471
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>gb|AC124606.3| Mus musculus BAC clone RP23-82D2 from chromosome unknown, complete
              sequence
          Length = 225720

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 369    atcatcaacaaaattgttga 388
              ||||||||||||||||||||
Sbjct: 133173 atcatcaacaaaattgttga 133192
to top
>gb|J04053.1|SPESAP S.peregrina sapecin mRNA, complete cds
          Length = 447

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 336 aaggcatgcaaaccatcaac 355
           ||||||||||||||||||||
Sbjct: 215 aaggcatgcaaaccatcaac 196


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,261,931
Number of Sequences: 3902068
Number of extensions: 7261931
Number of successful extensions: 132809
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 132468
Number of HSP's gapped (non-prelim): 341
length of query: 609
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 586
effective length of database: 17,143,297,704
effective search space: 10045972454544
effective search space used: 10045972454544
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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