>gb|AC121590.2| Mus musculus BAC clone RP23-281L22 from 2, complete sequence
          Length = 167364

 Score = 42.1 bits (21), Expect = 0.38
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 87     tttcccctgttccagcatctc 107
              |||||||||||||||||||||
Sbjct: 130102 tttcccctgttccagcatctc 130122

>dbj|AB095024.1| Pseudomonas sp. KNA6-3 arcB gene for probable aerobic respiration
           control sensor protein ArcB, partial sequence
          Length = 959

 Score = 42.1 bits (21), Expect = 0.38
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 93  ctgttccagcatctccacatc 113
           |||||||||||||||||||||
Sbjct: 806 ctgttccagcatctccacatc 786

>emb|AL928543.5| Mouse DNA sequence from clone RP23-345P1 on chromosome 2, complete
             sequence
          Length = 90551

 Score = 42.1 bits (21), Expect = 0.38
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 87    tttcccctgttccagcatctc 107
             |||||||||||||||||||||
Sbjct: 75534 tttcccctgttccagcatctc 75554

>gb|AC122814.3| Mus musculus BAC clone RP23-234A12 from 6, complete sequence
          Length = 144136

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 99     cagcatctccacatctatct 118
              ||||||||||||||||||||
Sbjct: 133715 cagcatctccacatctatct 133734

>gb|AC097265.4| Pan troglodytes  BAC RP43-119N13 (Roswell Park Cancer Institute Male
             Chimpanzee BAC Library) complete sequence
          Length = 187084

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 31/35 (88%)
 Strand = Plus / Plus

                                                
Query: 40    ctantaaaagtacaaaacgaaaacaaaagccggca 74
             ||| |||||||||||||  |||| |||||||||||
Sbjct: 50891 ctattaaaagtacaaaaaaaaaaaaaaagccggca 50925

>gb|AC009690.17| Homo sapiens chromosome 15, clone RP11-106M3, complete sequence
          Length = 184640

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 103    atctccacatctatcttcat 122
              ||||||||||||||||||||
Sbjct: 123775 atctccacatctatcttcat 123794

>gb|AC174866.1| Mus musculus BAC clone RP24-322E13 from chromosome 6, complete sequence
          Length = 168541

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    cagcatctccacatctatct 118
             ||||||||||||||||||||
Sbjct: 79613 cagcatctccacatctatct 79632

>gb|AC171501.2| Mus musculus BAC clone RP23-255N3 from chromosome 6, complete sequence
          Length = 170938

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 99     cagcatctccacatctatct 118
              ||||||||||||||||||||
Sbjct: 101905 cagcatctccacatctatct 101886

>dbj|AP006145.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT03H18, TM0262,
             complete sequence
          Length = 78589

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 92    cctgttccagcatctccaca 111
             ||||||||||||||||||||
Sbjct: 59327 cctgttccagcatctccaca 59346

>gb|AY432250.1| Aedes aegypti ASAP ID: 34559 questionable: deoxyribonuclease I
          mRNA sequence
          Length = 667

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 19 atggcggctcagctgaacg 37
          |||||||||||||||||||
Sbjct: 51 atggcggctcagctgaacg 69

>gb|AC024763.2| Caenorhabditis elegans cosmid Y39A3CL, complete sequence
          Length = 74520

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 60    aaacaaaagccggcagaga 78
             |||||||||||||||||||
Sbjct: 43995 aaacaaaagccggcagaga 44013

>ref|XM_415666.1| PREDICTED: Gallus gallus similar to ER to nucleus signalling 1
            (LOC417414), mRNA
          Length = 3354

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 96   ttccagcatctccacatct 114
            |||||||||||||||||||
Sbjct: 2037 ttccagcatctccacatct 2055

>gb|AC147474.2| Mus musculus BAC clone RP23-425D11 from chromosome 19, complete sequence
          Length = 195273

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 52     caaaacgaaaacaaaagcc 70
              |||||||||||||||||||
Sbjct: 170859 caaaacgaaaacaaaagcc 170877

>gb|AC139335.3| Mus musculus BAC clone RP23-376N11 from chromosome 10, complete sequence
          Length = 195132

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 52     caaaacgaaaacaaaagcc 70
              |||||||||||||||||||
Sbjct: 151840 caaaacgaaaacaaaagcc 151858

>gb|AC161056.5| Mus musculus BAC clone RP23-241J7 from chromosome 3, complete sequence
          Length = 226878

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 51     acaaaacgaaaacaaaagc 69
              |||||||||||||||||||
Sbjct: 125628 acaaaacgaaaacaaaagc 125646

>gb|AC125166.3| Mus musculus BAC clone RP24-435J4 from chromosome 18, complete sequence
          Length = 174565

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 93     ctgttccagcatctccaca 111
              |||||||||||||||||||
Sbjct: 103437 ctgttccagcatctccaca 103419

>gb|AC117263.4| Mus musculus BAC clone RP24-547F18 from chromosome 19, complete
             sequence
          Length = 201607

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 52    caaaacgaaaacaaaagcc 70
             |||||||||||||||||||
Sbjct: 85906 caaaacgaaaacaaaagcc 85924

>gb|AC160117.2| Mus musculus BAC clone RP23-456M15 from chromosome 13, complete
             sequence
          Length = 176606

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 103   atctccacatctatcttca 121
             |||||||||||||||||||
Sbjct: 85658 atctccacatctatcttca 85640

>gb|BC018955.2| Homo sapiens cDNA clone IMAGE:4125322
          Length = 3744

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 50   tacaaaacgaaaacaaaag 68
            |||||||||||||||||||
Sbjct: 2755 tacaaaacgaaaacaaaag 2737

>emb|Z98047.1|HS162H14 Human DNA sequence from clone RP1-162H14 on chromosome 22, complete
             sequence
          Length = 47542

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 95    gttccagcatctccacatc 113
             |||||||||||||||||||
Sbjct: 18808 gttccagcatctccacatc 18826

>emb|AL645944.11| Human DNA sequence from clone RP11-179G8 on chromosome 1, complete
             sequence
          Length = 191247

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 95    gttccagcatctccacatc 113
             |||||||||||||||||||
Sbjct: 43644 gttccagcatctccacatc 43626

>emb|AL590235.23| Human DNA sequence from clone RP11-529E10 on chromosome 4, complete
             sequence
          Length = 159246

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 50    tacaaaacgaaaacaaaag 68
             |||||||||||||||||||
Sbjct: 64657 tacaaaacgaaaacaaaag 64639

>emb|AL359475.13| Human DNA sequence from clone RP11-121P10 on chromosome 6 Contains
            part of a novel gene, complete sequence
          Length = 44627

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 89   tcccctgttccagcatctc 107
            |||||||||||||||||||
Sbjct: 4841 tcccctgttccagcatctc 4823

>emb|CR339046.11| Zebrafish DNA sequence from clone CH211-112C15 in linkage group 23,
             complete sequence
          Length = 170974

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 92    cctgttccagcatctccac 110
             |||||||||||||||||||
Sbjct: 91612 cctgttccagcatctccac 91630

>emb|AL590614.8| Mouse DNA sequence from clone RP23-9O16 on chromosome 13 Contains the 3'
              end of the gene for a novel protein similar to nuclear
              envelope pore membrane protein POM121, the Prss16 gene for
              thymus serine protease16, three novel genes, the genes for
              two H2a, two H2b and one H4 histone family members, a
              ribosomal protein L37A (Rpl37a) pseudogene, a novel
              pseudogene, three genes for novel vomeronasal 1 receptor H
              (V1rh) family members, the gene for a novel vomeronasal 1
              receptor I (V1ri) family member, six V1ri pseudogenes, a
              V1rh pseudogene and six CpG islands, complete sequence
          Length = 210845

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 45     aaaagtacaaaacgaaaacaaaa 67
              ||||| |||||||||||||||||
Sbjct: 140468 aaaaggacaaaacgaaaacaaaa 140490

>emb|AL627387.5| Mouse DNA sequence from clone RP23-154I9 on chromosome 13 Contains the
             V1rh13 and V1rh12 genes for vomeronasal 1 receptos H13 and
             H12, and  vomeronasal 1 receptor I (V1ri) and H (V1rh)
             pseudogenes, complete sequence
          Length = 70680

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 45    aaaagtacaaaacgaaaacaaaa 67
             ||||| |||||||||||||||||
Sbjct: 46639 aaaaggacaaaacgaaaacaaaa 46617

>gb|AC105185.5| Homo sapiens chromosome 8, clone RP11-1113C11, complete sequence
          Length = 152141

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 95     gttccagcatctccacatc 113
              |||||||||||||||||||
Sbjct: 151174 gttccagcatctccacatc 151192

>gb|AC105091.3| Homo sapiens chromosome 8, clone RP11-479P21, complete sequence
          Length = 173888

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 95     gttccagcatctccacatc 113
              |||||||||||||||||||
Sbjct: 143740 gttccagcatctccacatc 143722

>ref|XM_686840.1| PREDICTED: Danio rerio similar to AKT-phosphorylation enhancer
           (LOC563478), mRNA
          Length = 2337

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 92  cctgttccagcatctccac 110
           |||||||||||||||||||
Sbjct: 409 cctgttccagcatctccac 391

>gb|AC008519.5| Homo sapiens chromosome 5 clone CTC-460G13, complete sequence
          Length = 195979

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 98    ccagcatctccacatctat 116
             |||||||||||||||||||
Sbjct: 92623 ccagcatctccacatctat 92605

>gb|BC007841.1|BC007841 Homo sapiens, clone IMAGE:4128195, mRNA, partial cds
          Length = 3752

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 50   tacaaaacgaaaacaaaag 68
            |||||||||||||||||||
Sbjct: 2763 tacaaaacgaaaacaaaag 2745

>dbj|AB018117.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQL5
          Length = 88398

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 47    aagtacaaaacgaaaacaa 65
             |||||||||||||||||||
Sbjct: 28076 aagtacaaaacgaaaacaa 28094

>gb|AC123878.4| Mus musculus BAC clone RP23-318I20 from 3, complete sequence
          Length = 215121

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 51    acaaaacgaaaacaaaagc 69
             |||||||||||||||||||
Sbjct: 81432 acaaaacgaaaacaaaagc 81414

>gb|AC147634.3| Mus musculus BAC clone RP23-305G22 from 10, complete sequence
          Length = 207157

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 52     caaaacgaaaacaaaagcc 70
              |||||||||||||||||||
Sbjct: 156154 caaaacgaaaacaaaagcc 156136

>emb|Z69708.1|HSL241B9C Human DNA sequence from clone LA04NC01-241B9 on chromosome 4, complete
             sequence
          Length = 17243

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 50    tacaaaacgaaaacaaaag 68
             |||||||||||||||||||
Sbjct: 16762 tacaaaacgaaaacaaaag 16780

>emb|AL929498.11| Mouse DNA sequence from clone RP23-438L23 on chromosome 2, complete
             sequence
          Length = 98968

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 45    aaaagtacaaaacgaaaacaaaa 67
             ||||||||||||| |||||||||
Sbjct: 30044 aaaagtacaaaacaaaaacaaaa 30022

>gb|AC150276.2| Mus musculus BAC clone RP23-177G19 from 19, complete sequence
          Length = 221528

 Score = 38.2 bits (19), Expect = 6.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 52     caaaacgaaaacaaaagcc 70
              |||||||||||||||||||
Sbjct: 217037 caaaacgaaaacaaaagcc 217019


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,073,673
Number of Sequences: 3902068
Number of extensions: 1073673
Number of successful extensions: 100630
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 100560
Number of HSP's gapped (non-prelim): 70
length of query: 128
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 107
effective length of database: 17,151,101,840
effective search space: 1835167896880
effective search space used: 1835167896880
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)