Clone Name | rbasd17c23 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | DNJCD_HUMAN (O75165) DnaJ homolog subfamily C member 13 (Require... | 33 | 0.58 |
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>DNJCD_HUMAN (O75165) DnaJ homolog subfamily C member 13 (Required for| receptor-mediated endocytosis 8) Length = 2243 Score = 33.5 bits (75), Expect = 0.58 Identities = 16/59 (27%), Positives = 28/59 (47%) Frame = +3 Query: 18 QTTSHQNSAVPETARHVHHRKQQQRLLLGMAAQLNALVKVQNENKSRQRITAFPCSSIS 194 Q +H+N+A+P++A V H + L + A L + + N K R C +I+ Sbjct: 2056 QAMNHRNNAIPKSAIRVIHALSENELCVRAMASLETIGPLMNGMKKRADTVGLACEAIN 2114 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 101,974,495 Number of Sequences: 219361 Number of extensions: 2223976 Number of successful extensions: 5672 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 5486 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5670 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6314008338 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)