ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd16n18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_479842.1| Oryza sativa (japonica cultivar-group), mRNA 218 2e-53
2ref|XM_507105.1| PREDICTED Oryza sativa (japonica cultivar-group... 218 2e-53
3dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 218 2e-53
4dbj|AP006723.2| Oryza sativa (japonica cultivar-group) genomic D... 218 2e-53
5dbj|AP005730.2| Oryza sativa (japonica cultivar-group) genomic D... 218 2e-53
6dbj|AP006617.2| Oryza sativa (japonica cultivar-group) genomic D... 218 2e-53
7emb|AJ312315.1|OSA312315 Oryza sativa putative B'teta gene for p... 218 2e-53
8dbj|AK060794.1| Oryza sativa (japonica cultivar-group) cDNA clon... 218 2e-53
9dbj|AK067159.1| Oryza sativa (japonica cultivar-group) cDNA clon... 210 4e-51
10emb|AL136454.6| Human DNA sequence from clone RP11-92K2 on chrom... 42 2.1
11dbj|AP006096.1| Lotus japonicus genomic DNA, chromosome 4, clone... 42 2.1
12gb|AY221089.1| Solanum tuberosum cellulose synthase (StCesA2) mR... 40 8.4
13emb|AJ566434.1|TCA566434 Theobroma cacao microsatellite, clone m... 40 8.4
14emb|AL358394.14| Human DNA sequence from clone RP11-445N18 on ch... 40 8.4
15emb|AL022344.3|HSY214H10 Human DNA sequence from clone XX-Y214H1... 40 8.4
16gb|AC124148.15| Pan troglodytes clone rp43-71k6, complete sequence 40 8.4
17emb|BX826998.1|CNS0A44X Arabidopsis thaliana Full-length cDNA Co... 40 8.4
18dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome 40 8.4
19gb|U31600.1|HEU31600 Heliocidaris erythrogramma HEHBOX10 (HeHbox... 40 8.4

>ref|XM_479842.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2284

 Score =  218 bits (110), Expect = 2e-53
 Identities = 173/194 (89%)
 Strand = Plus / Minus

                                                                        
Query: 425  tgacgaggcaatttcctctaggcgcttccatgtagcctcacgttttgatcgcaccgcatc 484
            |||||||||||| || ||||||||||||||||| |||||||||||||||| || |||   
Sbjct: 1658 tgacgaggcaatctcttctaggcgcttccatgtggcctcacgttttgatctcaacgcggt 1599

                                                                        
Query: 485  ttcttgagcttcatcgtcctggaacttcttgaggcacccctcgaacagtacagggtcatg 544
            |||||  |||||||| ||||  ||||||||||||||| |||| |||||||||||||||||
Sbjct: 1598 ttcttttgcttcatcttcctcaaacttcttgaggcactcctcaaacagtacagggtcatg 1539

                                                                        
Query: 545  gtccaggaatattttgcgaacattaagactcaagctttgaactgcctggttccaatgacc 604
             |||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||  |
Sbjct: 1538 atccatgaatatcttgcgaacattaagactcaagctttgaactgcctggttccagtgttc 1479

                          
Query: 605  ttttgtatttcgtt 618
            ||||||||||||||
Sbjct: 1478 ttttgtatttcgtt 1465



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 75/89 (84%), Gaps = 1/89 (1%)
 Strand = Plus / Minus

                                                                        
Query: 221  gtccatcatctaggttgtatttacatgtcagcctgt-aagatgttcaggaacgagtaaca 279
            ||||||||||||  |||||| |||| |||||||||  || |||||||||| | |||||||
Sbjct: 1877 gtccatcatctaccttgtatatacaagtcagcctgcgaaaatgttcaggagcaagtaaca 1818

                                         
Query: 280  agaggcaagcagtcgtccatgagcattca 308
             |||||| ||||   ||||||||||||||
Sbjct: 1817 tgaggcatgcaggaatccatgagcattca 1789



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>ref|XM_507105.1| PREDICTED Oryza sativa (japonica cultivar-group), B1203H11.34 mRNA
          Length = 2549

 Score =  218 bits (110), Expect = 2e-53
 Identities = 173/194 (89%)
 Strand = Plus / Minus

                                                                        
Query: 425  tgacgaggcaatttcctctaggcgcttccatgtagcctcacgttttgatcgcaccgcatc 484
            |||||||||||| || ||||||||||||||||| |||||||||||||||| || |||   
Sbjct: 1918 tgacgaggcaatctcttctaggcgcttccatgtggcctcacgttttgatctcaacgcggt 1859

                                                                        
Query: 485  ttcttgagcttcatcgtcctggaacttcttgaggcacccctcgaacagtacagggtcatg 544
            |||||  |||||||| ||||  ||||||||||||||| |||| |||||||||||||||||
Sbjct: 1858 ttcttttgcttcatcttcctcaaacttcttgaggcactcctcaaacagtacagggtcatg 1799

                                                                        
Query: 545  gtccaggaatattttgcgaacattaagactcaagctttgaactgcctggttccaatgacc 604
             |||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||  |
Sbjct: 1798 atccatgaatatcttgcgaacattaagactcaagctttgaactgcctggttccagtgttc 1739

                          
Query: 605  ttttgtatttcgtt 618
            ||||||||||||||
Sbjct: 1738 ttttgtatttcgtt 1725



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 75/89 (84%), Gaps = 1/89 (1%)
 Strand = Plus / Minus

                                                                        
Query: 221  gtccatcatctaggttgtatttacatgtcagcctgt-aagatgttcaggaacgagtaaca 279
            ||||||||||||  |||||| |||| |||||||||  || |||||||||| | |||||||
Sbjct: 2137 gtccatcatctaccttgtatatacaagtcagcctgcgaaaatgttcaggagcaagtaaca 2078

                                         
Query: 280  agaggcaagcagtcgtccatgagcattca 308
             |||||| ||||   ||||||||||||||
Sbjct: 2077 tgaggcatgcaggaatccatgagcattca 2049



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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  218 bits (110), Expect = 2e-53
 Identities = 173/194 (89%)
 Strand = Plus / Plus

                                                                           
Query: 425     tgacgaggcaatttcctctaggcgcttccatgtagcctcacgttttgatcgcaccgcatc 484
               |||||||||||| || ||||||||||||||||| |||||||||||||||| || |||   
Sbjct: 1200172 tgacgaggcaatctcttctaggcgcttccatgtggcctcacgttttgatctcaacgcggt 1200231

                                                                           
Query: 485     ttcttgagcttcatcgtcctggaacttcttgaggcacccctcgaacagtacagggtcatg 544
               |||||  |||||||| ||||  ||||||||||||||| |||| |||||||||||||||||
Sbjct: 1200232 ttcttttgcttcatcttcctcaaacttcttgaggcactcctcaaacagtacagggtcatg 1200291

                                                                           
Query: 545     gtccaggaatattttgcgaacattaagactcaagctttgaactgcctggttccaatgacc 604
                |||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||  |
Sbjct: 1200292 atccatgaatatcttgcgaacattaagactcaagctttgaactgcctggttccagtgttc 1200351

                             
Query: 605     ttttgtatttcgtt 618
               ||||||||||||||
Sbjct: 1200352 ttttgtatttcgtt 1200365



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 75/89 (84%), Gaps = 1/89 (1%)
 Strand = Plus / Plus

                                                                           
Query: 221     gtccatcatctaggttgtatttacatgtcagcctgt-aagatgttcaggaacgagtaaca 279
               ||||||||||||  |||||| |||| |||||||||  || |||||||||| | |||||||
Sbjct: 1199953 gtccatcatctaccttgtatatacaagtcagcctgcgaaaatgttcaggagcaagtaaca 1200012

                                            
Query: 280     agaggcaagcagtcgtccatgagcattca 308
                |||||| ||||   ||||||||||||||
Sbjct: 1200013 tgaggcatgcaggaatccatgagcattca 1200041



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>dbj|AP006723.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:B1203H11
          Length = 156561

 Score =  218 bits (110), Expect = 2e-53
 Identities = 173/194 (89%)
 Strand = Plus / Plus

                                                                          
Query: 425    tgacgaggcaatttcctctaggcgcttccatgtagcctcacgttttgatcgcaccgcatc 484
              |||||||||||| || ||||||||||||||||| |||||||||||||||| || |||   
Sbjct: 113409 tgacgaggcaatctcttctaggcgcttccatgtggcctcacgttttgatctcaacgcggt 113468

                                                                          
Query: 485    ttcttgagcttcatcgtcctggaacttcttgaggcacccctcgaacagtacagggtcatg 544
              |||||  |||||||| ||||  ||||||||||||||| |||| |||||||||||||||||
Sbjct: 113469 ttcttttgcttcatcttcctcaaacttcttgaggcactcctcaaacagtacagggtcatg 113528

                                                                          
Query: 545    gtccaggaatattttgcgaacattaagactcaagctttgaactgcctggttccaatgacc 604
               |||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||  |
Sbjct: 113529 atccatgaatatcttgcgaacattaagactcaagctttgaactgcctggttccagtgttc 113588

                            
Query: 605    ttttgtatttcgtt 618
              ||||||||||||||
Sbjct: 113589 ttttgtatttcgtt 113602



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 75/89 (84%), Gaps = 1/89 (1%)
 Strand = Plus / Plus

                                                                          
Query: 221    gtccatcatctaggttgtatttacatgtcagcctg-taagatgttcaggaacgagtaaca 279
              ||||||||||||  |||||| |||| |||||||||  || |||||||||| | |||||||
Sbjct: 113190 gtccatcatctaccttgtatatacaagtcagcctgcgaaaatgttcaggagcaagtaaca 113249

                                           
Query: 280    agaggcaagcagtcgtccatgagcattca 308
               |||||| ||||   ||||||||||||||
Sbjct: 113250 tgaggcatgcaggaatccatgagcattca 113278



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>dbj|AP005730.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0073J19
          Length = 165174

 Score =  218 bits (110), Expect = 2e-53
 Identities = 173/194 (89%)
 Strand = Plus / Plus

                                                                         
Query: 425   tgacgaggcaatttcctctaggcgcttccatgtagcctcacgttttgatcgcaccgcatc 484
             |||||||||||| || ||||||||||||||||| |||||||||||||||| || |||   
Sbjct: 29479 tgacgaggcaatctcttctaggcgcttccatgtggcctcacgttttgatctcaacgcggt 29538

                                                                         
Query: 485   ttcttgagcttcatcgtcctggaacttcttgaggcacccctcgaacagtacagggtcatg 544
             |||||  |||||||| ||||  ||||||||||||||| |||| |||||||||||||||||
Sbjct: 29539 ttcttttgcttcatcttcctcaaacttcttgaggcactcctcaaacagtacagggtcatg 29598

                                                                         
Query: 545   gtccaggaatattttgcgaacattaagactcaagctttgaactgcctggttccaatgacc 604
              |||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||  |
Sbjct: 29599 atccatgaatatcttgcgaacattaagactcaagctttgaactgcctggttccagtgttc 29658

                           
Query: 605   ttttgtatttcgtt 618
             ||||||||||||||
Sbjct: 29659 ttttgtatttcgtt 29672



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 75/89 (84%), Gaps = 1/89 (1%)
 Strand = Plus / Plus

                                                                         
Query: 221   gtccatcatctaggttgtatttacatgtcagcctgt-aagatgttcaggaacgagtaaca 279
             ||||||||||||  |||||| |||| |||||||||  || |||||||||| | |||||||
Sbjct: 29260 gtccatcatctaccttgtatatacaagtcagcctgcgaaaatgttcaggagcaagtaaca 29319

                                          
Query: 280   agaggcaagcagtcgtccatgagcattca 308
              |||||| ||||   ||||||||||||||
Sbjct: 29320 tgaggcatgcaggaatccatgagcattca 29348



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>dbj|AP006617.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0091F23
          Length = 147699

 Score =  218 bits (110), Expect = 2e-53
 Identities = 173/194 (89%)
 Strand = Plus / Plus

                                                                         
Query: 425   tgacgaggcaatttcctctaggcgcttccatgtagcctcacgttttgatcgcaccgcatc 484
             |||||||||||| || ||||||||||||||||| |||||||||||||||| || |||   
Sbjct: 67251 tgacgaggcaatctcttctaggcgcttccatgtggcctcacgttttgatctcaacgcggt 67310

                                                                         
Query: 485   ttcttgagcttcatcgtcctggaacttcttgaggcacccctcgaacagtacagggtcatg 544
             |||||  |||||||| ||||  ||||||||||||||| |||| |||||||||||||||||
Sbjct: 67311 ttcttttgcttcatcttcctcaaacttcttgaggcactcctcaaacagtacagggtcatg 67370

                                                                         
Query: 545   gtccaggaatattttgcgaacattaagactcaagctttgaactgcctggttccaatgacc 604
              |||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||  |
Sbjct: 67371 atccatgaatatcttgcgaacattaagactcaagctttgaactgcctggttccagtgttc 67430

                           
Query: 605   ttttgtatttcgtt 618
             ||||||||||||||
Sbjct: 67431 ttttgtatttcgtt 67444



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 75/89 (84%), Gaps = 1/89 (1%)
 Strand = Plus / Plus

                                                                         
Query: 221   gtccatcatctaggttgtatttacatgtcagcctgt-aagatgttcaggaacgagtaaca 279
             ||||||||||||  |||||| |||| |||||||||  || |||||||||| | |||||||
Sbjct: 67032 gtccatcatctaccttgtatatacaagtcagcctgcgaaaatgttcaggagcaagtaaca 67091

                                          
Query: 280   agaggcaagcagtcgtccatgagcattca 308
              |||||| ||||   ||||||||||||||
Sbjct: 67092 tgaggcatgcaggaatccatgagcattca 67120



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>emb|AJ312315.1|OSA312315 Oryza sativa putative B'teta gene for protein phosphatase 2A B'teta
            subunit, exons 1-2
          Length = 3753

 Score =  218 bits (110), Expect = 2e-53
 Identities = 173/194 (89%)
 Strand = Plus / Minus

                                                                        
Query: 425  tgacgaggcaatttcctctaggcgcttccatgtagcctcacgttttgatcgcaccgcatc 484
            |||||||||||| || ||||||||||||||||| |||||||||||||||| || |||   
Sbjct: 3227 tgacgaggcaatctcttctaggcgcttccatgtggcctcacgttttgatctcaacgcggt 3168

                                                                        
Query: 485  ttcttgagcttcatcgtcctggaacttcttgaggcacccctcgaacagtacagggtcatg 544
            |||||  |||||||| ||||  ||||||||||||||| |||| |||||||||||||||||
Sbjct: 3167 ttcttttgcttcatcttcctcaaacttcttgaggcactcctcaaacagtacagggtcatg 3108

                                                                        
Query: 545  gtccaggaatattttgcgaacattaagactcaagctttgaactgcctggttccaatgacc 604
             |||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||  |
Sbjct: 3107 atccatgaatatcttgcgaacattaagactcaagctttgaactgcctggttccagtgttc 3048

                          
Query: 605  ttttgtatttcgtt 618
            ||||||||||||||
Sbjct: 3047 ttttgtatttcgtt 3034



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 75/89 (84%), Gaps = 1/89 (1%)
 Strand = Plus / Minus

                                                                        
Query: 221  gtccatcatctaggttgtatttacatgtcagcctgt-aagatgttcaggaacgagtaaca 279
            ||||||||||||  |||||| |||| |||||||||  || |||||||||| | |||||||
Sbjct: 3446 gtccatcatctaccttgtatatacaagtcagcctgcgaaaatgttcaggagcaagtaaca 3387

                                         
Query: 280  agaggcaagcagtcgtccatgagcattca 308
             |||||| ||||   ||||||||||||||
Sbjct: 3386 tgaggcatgcaggaatccatgagcattca 3358



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>dbj|AK060794.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-E07, full
            insert sequence
          Length = 2284

 Score =  218 bits (110), Expect = 2e-53
 Identities = 173/194 (89%)
 Strand = Plus / Minus

                                                                        
Query: 425  tgacgaggcaatttcctctaggcgcttccatgtagcctcacgttttgatcgcaccgcatc 484
            |||||||||||| || ||||||||||||||||| |||||||||||||||| || |||   
Sbjct: 1658 tgacgaggcaatctcttctaggcgcttccatgtggcctcacgttttgatctcaacgcggt 1599

                                                                        
Query: 485  ttcttgagcttcatcgtcctggaacttcttgaggcacccctcgaacagtacagggtcatg 544
            |||||  |||||||| ||||  ||||||||||||||| |||| |||||||||||||||||
Sbjct: 1598 ttcttttgcttcatcttcctcaaacttcttgaggcactcctcaaacagtacagggtcatg 1539

                                                                        
Query: 545  gtccaggaatattttgcgaacattaagactcaagctttgaactgcctggttccaatgacc 604
             |||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||  |
Sbjct: 1538 atccatgaatatcttgcgaacattaagactcaagctttgaactgcctggttccagtgttc 1479

                          
Query: 605  ttttgtatttcgtt 618
            ||||||||||||||
Sbjct: 1478 ttttgtatttcgtt 1465



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 75/89 (84%), Gaps = 1/89 (1%)
 Strand = Plus / Minus

                                                                        
Query: 221  gtccatcatctaggttgtatttacatgtcagcctgt-aagatgttcaggaacgagtaaca 279
            ||||||||||||  |||||| |||| |||||||||  || |||||||||| | |||||||
Sbjct: 1877 gtccatcatctaccttgtatatacaagtcagcctgcgaaaatgttcaggagcaagtaaca 1818

                                         
Query: 280  agaggcaagcagtcgtccatgagcattca 308
             |||||| ||||   ||||||||||||||
Sbjct: 1817 tgaggcatgcaggaatccatgagcattca 1789



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>dbj|AK067159.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096J23, full
            insert sequence
          Length = 2549

 Score =  210 bits (106), Expect = 4e-51
 Identities = 172/194 (88%)
 Strand = Plus / Minus

                                                                        
Query: 425  tgacgaggcaatttcctctaggcgcttccatgtagcctcacgttttgatcgcaccgcatc 484
            |||||||||||| || ||||||||||||||||| |||||||||||||||| || |||   
Sbjct: 1918 tgacgaggcaatctcttctaggcgcttccatgtggcctcacgttttgatctcaacgcggt 1859

                                                                        
Query: 485  ttcttgagcttcatcgtcctggaacttcttgaggcacccctcgaacagtacagggtcatg 544
            |||||  |||||||| ||||  ||||||||||||||| |||| |||||||||||||||||
Sbjct: 1858 ttcttttgcttcatcttcctcaaacttcttgaggcactcctcaaacagtacagggtcatg 1799

                                                                        
Query: 545  gtccaggaatattttgcgaacattaagactcaagctttgaactgcctggttccaatgacc 604
             |||| |||||| ||||||||||||| ||||||||||||||||||||||||||| ||  |
Sbjct: 1798 atccatgaatatcttgcgaacattaaaactcaagctttgaactgcctggttccagtgttc 1739

                          
Query: 605  ttttgtatttcgtt 618
            ||||||||||||||
Sbjct: 1738 ttttgtatttcgtt 1725



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 75/89 (84%), Gaps = 1/89 (1%)
 Strand = Plus / Minus

                                                                        
Query: 221  gtccatcatctaggttgtatttacatgtcagcctgt-aagatgttcaggaacgagtaaca 279
            ||||||||||||  |||||| |||| |||||||||  || |||||||||| | |||||||
Sbjct: 2137 gtccatcatctaccttgtatatacaagtcagcctgcgaaaatgttcaggagcaagtaaca 2078

                                         
Query: 280  agaggcaagcagtcgtccatgagcattca 308
             |||||| ||||   ||||||||||||||
Sbjct: 2077 tgaggcatgcaggaatccatgagcattca 2049



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>emb|AL136454.6| Human DNA sequence from clone RP11-92K2 on chromosome 1 Contains the 3'
              end of the RGS13 gene for regulator of G-protein signalling
              13 and a processed pseudogene similar to ribosomal protein
              S27a (RPS27A), complete sequence
          Length = 129689

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 3      ttacagttcaacaaaatcagccacc 27
              ||||||||||||||||||| |||||
Sbjct: 107589 ttacagttcaacaaaatcatccacc 107613



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>dbj|AP006096.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10G09, TM0173b,
             complete sequence
          Length = 66866

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 481   catcttcttgagcttcatcgtcctg 505
             ||||||||||||||||||| |||||
Sbjct: 16611 catcttcttgagcttcatcttcctg 16635



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>gb|AY221089.1| Solanum tuberosum cellulose synthase (StCesA2) mRNA, partial cds
          Length = 2515

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 83   cacattgacctcttgcagca 102
            ||||||||||||||||||||
Sbjct: 2303 cacattgacctcttgcagca 2284



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>emb|AJ566434.1|TCA566434 Theobroma cacao microsatellite, clone mTcCIR90
          Length = 435

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 223 ccatcatctaggttgtatttacat 246
           |||| |||||||||||||||||||
Sbjct: 349 ccattatctaggttgtatttacat 326



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>emb|AL358394.14| Human DNA sequence from clone RP11-445N18 on chromosome 10 Contains
             four novel genes, the 5' end of a novel gene, a Ras
             suppressor protein 1 pseudogene, a pseudogene similar to
             part of cubilin (intrinsic factor-cobalamin receptor,
             CUBN),  the 5' end of a breast cancer antigen (NY-BR-1)
             pseudogene, a ribosomal protein S19 pseudogene, and a
             novel pseudogene similar to part of KIAA1052 protein,
             complete sequence
          Length = 116859

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 580   tttgaactgcctggttccaatgac 603
             |||||||||||||| |||||||||
Sbjct: 52740 tttgaactgcctgggtccaatgac 52763



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>emb|AL022344.3|HSY214H10 Human DNA sequence from clone XX-Y214H10 on chromosome 10 Contains a
             vomeronasal receptor (V1R) pseudogene, a cubilin
             (intrinsic factor-cobalamin receptor) (CUBN) pseudogene,
             gene KIAA0187, two novel genes, the gene for a novel
             protein similar to Ras suppressor protein 1 (RSU1) and
             four CpG islands, complete sequence
          Length = 197864

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 580   tttgaactgcctggttccaatgac 603
             |||||||||||||| |||||||||
Sbjct: 83466 tttgaactgcctgggtccaatgac 83443



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>gb|AC124148.15| Pan troglodytes clone rp43-71k6, complete sequence
          Length = 194187

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 580    tttgaactgcctggttccaatgac 603
              |||||||||||||| |||||||||
Sbjct: 159361 tttgaactgcctgggtccaatgac 159384



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>emb|BX826998.1|CNS0A44X Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB84ZH10 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1301

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 488 ttgagcttcatcgtcctgga 507
           ||||||||||||||||||||
Sbjct: 562 ttgagcttcatcgtcctgga 581



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>dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome
          Length = 4303871

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 313    agcgattcaacttgatcctg 332
              ||||||||||||||||||||
Sbjct: 872843 agcgattcaacttgatcctg 872824



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>gb|U31600.1|HEU31600 Heliocidaris erythrogramma HEHBOX10 (HeHbox10) gene, partial cds
          Length = 1318

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 478 ccgcatcttcttgagcttcatcgtcctg 505
           |||||||||||| ||||||||| |||||
Sbjct: 303 ccgcatcttcttcagcttcatcctcctg 276


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,845,937
Number of Sequences: 3902068
Number of extensions: 4845937
Number of successful extensions: 99603
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 99526
Number of HSP's gapped (non-prelim): 68
length of query: 618
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 595
effective length of database: 17,143,297,704
effective search space: 10200262133880
effective search space used: 10200262133880
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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