ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd17c16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_464416.1| Oryza sativa (japonica cultivar-group), mRNA 349 7e-93
2dbj|AK069748.1| Oryza sativa (japonica cultivar-group) cDNA clon... 349 7e-93
3gb|AY103932.1| Zea mays PCO106241 mRNA sequence 313 4e-82
4dbj|AK101315.1| Oryza sativa (japonica cultivar-group) cDNA clon... 289 6e-75
5dbj|AK073428.1| Oryza sativa (japonica cultivar-group) cDNA clon... 289 6e-75
6dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 270 5e-69
7dbj|AP005849.3| Oryza sativa (japonica cultivar-group) genomic D... 270 5e-69
8dbj|AP005785.3| Oryza sativa (japonica cultivar-group) genomic D... 270 5e-69
9dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 216 7e-53
10dbj|AP004792.3| Oryza sativa (japonica cultivar-group) genomic D... 216 7e-53
11ref|NM_123243.1| Arabidopsis thaliana amino acid permease/ amino... 50 0.009
12ref|NM_185810.1| Oryza sativa (japonica cultivar-group), predic... 50 0.009
13dbj|AP003044.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.009
14dbj|AB009048.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 50 0.009
15dbj|AK120497.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.009
16dbj|AK099920.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.009
17dbj|AK066102.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.009
18dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.037
19dbj|AP005747.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.037
20dbj|AK109890.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.037
21dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.15
22dbj|AP003915.4| Oryza sativa (japonica cultivar-group) genomic D... 46 0.15
23emb|AL591136.20| Mouse DNA sequence from clone RP23-273P3 on chr... 42 2.3
24gb|AC011497.6| Homo sapiens chromosome 19 clone CTB-50E14, compl... 42 2.3
25gb|AC068561.2|AC068561 Mus musculus strain C57BL6/J chromosome 6... 42 2.3
26gb|AC153151.4| Mus musculus BAC clone RP23-82K6 from chromosome ... 42 2.3
27gb|AC140397.2| Mus musculus BAC clone RP23-162E7 from chromosome... 42 2.3
28gb|AC158647.2| Mus musculus 6 BAC RP23-275N13 (Roswell Park Canc... 42 2.3
29gb|AY362040.1| Alpha proteobacterium F11 16S ribosomal RNA gene,... 40 9.0
30gb|AY673139.1| Phyllobacteriaceae bacterium Ellin5412 16S riboso... 40 9.0
31ref|NM_189523.2| Oryza sativa (japonica cultivar-group), mRNA 40 9.0
32ref|XM_467580.1| Oryza sativa (japonica cultivar-group), mRNA 40 9.0
33gb|AC121311.16| Mus musculus chromosome 3, clone RP24-317L5, com... 40 9.0
34gb|AC112949.9| Mus musculus chromosome 17, clone RP23-294D3, com... 40 9.0
35gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 40 9.0
36gb|AC123850.3| Mus musculus BAC clone RP23-319K22 from chromosom... 40 9.0
37gb|AC107792.10| Mus musculus chromosome 17, clone RP23-83F8, com... 40 9.0
38gb|AC127351.3| Mus musculus BAC clone RP23-66K20 from chromosome... 40 9.0
39gb|AC127694.3| Mus musculus BAC clone RP23-235J3 from chromosome... 40 9.0
40gb|AC132392.3| Mus musculus BAC clone RP23-386F15 from chromosom... 40 9.0
41emb|CR702608.1|CNS0G530 Tetraodon nigroviridis full-length cDNA 40 9.0
42emb|CR692907.2|CNS0FXLJ Tetraodon nigroviridis full-length cDNA 40 9.0
43emb|CR689251.1|CNS0FURZ Tetraodon nigroviridis full-length cDNA 40 9.0
44gb|AC148154.15| Medicago truncatula clone mth2-17a6, complete se... 40 9.0
45emb|AL592431.15| Human DNA sequence from clone RP11-145M4 on chr... 40 9.0
46gb|AF008564.1| Alpha proteobacterium FH6 16S ribosomal RNA gene,... 40 9.0
47ref|XM_793013.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 9.0
48emb|CR382121.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 40 9.0
49emb|CR931802.8| Zebrafish DNA sequence from clone CH211-223A10 i... 40 9.0
50gb|AC024940.39| Homo sapiens 12 BAC RP11-627K11 (Roswell Park Ca... 40 9.0
51gb|DQ417335.1| Labrys sp. Liujia-146 16S ribosomal RNA gene, par... 40 9.0
52dbj|AB236172.1| Labrys methylaminiphilus gene for 16S rRNA, part... 40 9.0
53gb|AC006432.15| Homo sapiens 12p13 PAC RPCI11-726G1 (Roswell Par... 40 9.0
54dbj|AK143144.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN f... 40 9.0
55gb|AC093886.2| Homo sapiens BAC clone RP11-666L21 from 4, comple... 40 9.0
56gb|AC010746.8| Homo sapiens BAC clone RP11-550E21 from 2, comple... 40 9.0
57dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.0
58gb|AC092821.11| Homo sapiens 12 BAC RP11-525E9 (Roswell Park Can... 40 9.0
59gb|AC131945.1| Homo sapiens BAC clone RP11-5K24 from 4, complete... 40 9.0
60gb|AY766152.1| Labrys methylaminiphilus 16S ribosomal RNA gene, ... 40 9.0
61dbj|AP002903.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.0
62gb|AC012156.14|AC012156 Homo sapiens 12p11-37.2-54.4 BAC RP11-43... 40 9.0
63emb|BX682230.4| Mouse DNA sequence from clone RP23-236D21 on chr... 40 9.0
64gb|AY635896.1| Labrys sp. AMS5 16S ribosomal RNA gene, partial s... 40 9.0
65dbj|AP005284.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.0
66dbj|AK120458.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.0
67gb|DQ337554.1| Labrys methylaminiphilus 16S ribosomal RNA gene, ... 40 9.0
68dbj|AK069154.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.0
69dbj|AK067702.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.0
70gb|AY769909.1| Burkholderia sp. S8 16S ribosomal RNA gene, parti... 40 9.0
71gb|U22525.1|KLU22525 Kluyveromyces lactis high affinity glucose ... 40 9.0 
>ref|XM_464416.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1658

 Score =  349 bits (176), Expect = 7e-93
 Identities = 343/398 (86%), Gaps = 3/398 (0%)
 Strand = Plus / Minus

                                                                        
Query: 256  taggcctccaccttcctgt---agaagatgctcatcgcatcactgtacagggccactgaa 312
            ||||||||||| |||||||   ||| |||| |||  ||||| ||||| || ||||| |||
Sbjct: 1395 taggcctccactttcctgtgaaagatgatgttcagtgcatcgctgtatagagccacagaa 1336

                                                                        
Query: 313  ttggagagcacagcaagcacaatcatggttacagctaaaaccttatcgcgcttggttgcg 372
            || |||||||| |||||||||||||||||||  || |||| ||| |||||||||||||| 
Sbjct: 1335 tttgagagcaccgcaagcacaatcatggttaaggccaaaatcttgtcgcgcttggttgca 1276

                                                                        
Query: 373  atcccataagaatccctgagtatgatcatggcaggaaagatgaaaccaatcaggacagca 432
            || ||||||| ||| |||||||||||||||||||||||||| ||||| || || ||||||
Sbjct: 1275 attccataaggatctctgagtatgatcatggcaggaaagataaaaccgataagaacagca 1216

                                                                        
Query: 433  gctgtagcaccagtgaactggaaggcgtcccagatgcttggtatgaagttggcagcaaga 492
            ||||| ||||| ||||| ||||| |||||||||||||| ||||||||| |||||||||||
Sbjct: 1215 gctgtggcaccggtgaattggaacgcgtcccagatgctcggtatgaagatggcagcaaga 1156

                                                                        
Query: 493  taaatcacaacaaggagcgagacggtgataatggtaaaccttcggttgtcatgagaaatg 552
            ||||| ||| ||||||| ||  | ||||||||||  ||||||| ||||||| ||||||||
Sbjct: 1155 taaattacagcaaggagtgatcccgtgataatggcgaaccttctgttgtcacgagaaatg 1096

                                                                        
Query: 553  tgccttgaggtggggaagaggagtccatccaggttgagcctaagggcaaagaagactata 612
            |||||||  || |||||||| ||||||||||  |||||||||||||| ||||||||||| 
Sbjct: 1095 tgccttgcagtagggaagagcagtccatccaaattgagcctaagggcgaagaagactatg 1036

                                                  
Query: 613  gggaagacaagcatgacatggactacatagctcactct 650
            || ||||| |||||||  ||||||||||||||||||||
Sbjct: 1035 ggaaagacgagcatgatgtggactacatagctcactct 998



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                 
Query: 86   agacaaatgcagcaaacaaaatcctttcaagtgtccaaaacaaaaattaatgg 138
            ||||||||||||||||  ||||||||||| ||||||| || |||||| |||||
Sbjct: 1549 agacaaatgcagcaaatcaaatcctttcaggtgtccagaataaaaatcaatgg 1497
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>dbj|AK069748.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027D15, full
            insert sequence
          Length = 1736

 Score =  349 bits (176), Expect = 7e-93
 Identities = 343/398 (86%), Gaps = 3/398 (0%)
 Strand = Plus / Minus

                                                                        
Query: 256  taggcctccaccttcctgt---agaagatgctcatcgcatcactgtacagggccactgaa 312
            ||||||||||| |||||||   ||| |||| |||  ||||| ||||| || ||||| |||
Sbjct: 1473 taggcctccactttcctgtgaaagatgatgttcagtgcatcgctgtatagagccacagaa 1414

                                                                        
Query: 313  ttggagagcacagcaagcacaatcatggttacagctaaaaccttatcgcgcttggttgcg 372
            || |||||||| |||||||||||||||||||  || |||| ||| |||||||||||||| 
Sbjct: 1413 tttgagagcaccgcaagcacaatcatggttaaggccaaaatcttgtcgcgcttggttgca 1354

                                                                        
Query: 373  atcccataagaatccctgagtatgatcatggcaggaaagatgaaaccaatcaggacagca 432
            || ||||||| ||| |||||||||||||||||||||||||| ||||| || || ||||||
Sbjct: 1353 attccataaggatctctgagtatgatcatggcaggaaagataaaaccgataagaacagca 1294

                                                                        
Query: 433  gctgtagcaccagtgaactggaaggcgtcccagatgcttggtatgaagttggcagcaaga 492
            ||||| ||||| ||||| ||||| |||||||||||||| ||||||||| |||||||||||
Sbjct: 1293 gctgtggcaccggtgaattggaacgcgtcccagatgctcggtatgaagatggcagcaaga 1234

                                                                        
Query: 493  taaatcacaacaaggagcgagacggtgataatggtaaaccttcggttgtcatgagaaatg 552
            ||||| ||| ||||||| ||  | ||||||||||  ||||||| ||||||| ||||||||
Sbjct: 1233 taaattacagcaaggagtgatcccgtgataatggcgaaccttctgttgtcacgagaaatg 1174

                                                                        
Query: 553  tgccttgaggtggggaagaggagtccatccaggttgagcctaagggcaaagaagactata 612
            |||||||  || |||||||| ||||||||||  |||||||||||||| ||||||||||| 
Sbjct: 1173 tgccttgcagtagggaagagcagtccatccaaattgagcctaagggcgaagaagactatg 1114

                                                  
Query: 613  gggaagacaagcatgacatggactacatagctcactct 650
            || ||||| |||||||  ||||||||||||||||||||
Sbjct: 1113 ggaaagacgagcatgatgtggactacatagctcactct 1076



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                 
Query: 86   agacaaatgcagcaaacaaaatcctttcaagtgtccaaaacaaaaattaatgg 138
            ||||||||||||||||  ||||||||||| ||||||| || |||||| |||||
Sbjct: 1627 agacaaatgcagcaaatcaaatcctttcaggtgtccagaataaaaatcaatgg 1575
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>gb|AY103932.1| Zea mays PCO106241 mRNA sequence
          Length = 1923

 Score =  313 bits (158), Expect = 4e-82
 Identities = 320/374 (85%)
 Strand = Plus / Minus

                                                                        
Query: 276  gaagatgctcatcgcatcactgtacagggccactgaattggagagcacagcaagcacaat 335
            ||||||| ||||||| |||||||| ||||| || ||||| || || ||||||||||| ||
Sbjct: 1514 gaagatgttcatcgcgtcactgtatagggcgacagaatttgacaggacagcaagcacgat 1455

                                                                        
Query: 336  catggttacagctaaaaccttatcgcgcttggttgcgatcccataagaatccctgagtat 395
            |||||||||||| | || ||| ||||||||| | ||||| || ||||||||||| |||||
Sbjct: 1454 catggttacagccagaatcttgtcgcgcttgctcgcgattccgtaagaatccctaagtat 1395

                                                                        
Query: 396  gatcatggcaggaaagatgaaaccaatcaggacagcagctgtagcaccagtgaactggaa 455
            || |||||||||||| || ||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 1394 gaccatggcaggaaatataaaaccaatcaggacagcagctgtggcaccagtaaactggaa 1335

                                                                        
Query: 456  ggcgtcccagatgcttggtatgaagttggcagcaagataaatcacaacaaggagcgagac 515
             ||||||||||||||||||||||   |||||||||||||||| ||  | ||||| |||||
Sbjct: 1334 cgcgtcccagatgcttggtatgagaatggcagcaagataaattactgcgaggagagagac 1275

                                                                        
Query: 516  ggtgataatggtaaaccttcggttgtcatgagaaatgtgccttgaggtggggaagaggag 575
            |||||| ||||  || ||   ||||||| |||| ||||||||||| ||||||||||| | 
Sbjct: 1274 ggtgatgatggcgaatctcttgttgtcacgagagatgtgccttgacgtggggaagagcaa 1215

                                                                        
Query: 576  tccatccaggttgagcctaagggcaaagaagactatagggaagacaagcatgacatggac 635
             ||||||| ||||||||  |||||||||||||| || || |||||||||||||||||  |
Sbjct: 1214 cccatccaagttgagccggagggcaaagaagacaatgggaaagacaagcatgacatgtgc 1155

                          
Query: 636  tacatagctcactc 649
            | ||||||||||||
Sbjct: 1154 tgcatagctcactc 1141
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>dbj|AK101315.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034C14, full
            insert sequence
          Length = 1956

 Score =  289 bits (146), Expect = 6e-75
 Identities = 299/350 (85%)
 Strand = Plus / Minus

                                                                        
Query: 310  gaattggagagcacagcaagcacaatcatggttacagctaaaaccttatcgcgcttggtt 369
            ||||||||||| ||||||||||| |||| ||||||||| || | ||| || ||||||| |
Sbjct: 1557 gaattggagaggacagcaagcacgatcacggttacagccaagatcttgtcacgcttggat 1498

                                                                        
Query: 370  gcgatcccataagaatccctgagtatgatcatggcaggaaagatgaaaccaatcaggaca 429
            ||||| ||||||| |||||| ||||| | ||||||||| |||||||||||||||||||||
Sbjct: 1497 gcgattccataaggatccctaagtataaccatggcagggaagatgaaaccaatcaggaca 1438

                                                                        
Query: 430  gcagctgtagcaccagtgaactggaaggcgtcccagatgcttggtatgaagttggcagca 489
            ||||| || |||||||| |||||||| || ||||| ||||| ||||||||  ||||||||
Sbjct: 1437 gcagcagttgcaccagtaaactggaatgcatcccaaatgctcggtatgaaaatggcagca 1378

                                                                        
Query: 490  agataaatcacaacaaggagcgagacggtgataatggtaaaccttcggttgtcatgagaa 549
            |||||||| ||  | ||||| ||||  ||||| |||| ||| ||   ||||||| |||||
Sbjct: 1377 agataaattactgcgaggagtgagatagtgattatggcaaatctcttgttgtcacgagaa 1318

                                                                        
Query: 550  atgtgccttgaggtggggaagaggagtccatccaggttgagcctaagggcaaagaagact 609
            ||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 1317 atgtgccttgatgtggggaagagcagtccatccaagttgagcctaagggcaaagaagact 1258

                                                              
Query: 610  atagggaagacaagcatgacatggactacatagctcactctgactatatc 659
            || || ||||||||||| || ||  |  ||||||||||||  ||||||||
Sbjct: 1257 atgggaaagacaagcataacgtgagcagcatagctcactcgcactatatc 1208
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>dbj|AK073428.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033042H02, full
            insert sequence
          Length = 1885

 Score =  289 bits (146), Expect = 6e-75
 Identities = 299/350 (85%)
 Strand = Plus / Minus

                                                                        
Query: 310  gaattggagagcacagcaagcacaatcatggttacagctaaaaccttatcgcgcttggtt 369
            ||||||||||| ||||||||||| |||||||||||||| || | ||| || ||||||| |
Sbjct: 1436 gaattggagaggacagcaagcacgatcatggttacagccaagatcttgtcacgcttggat 1377

                                                                        
Query: 370  gcgatcccataagaatccctgagtatgatcatggcaggaaagatgaaaccaatcaggaca 429
            ||||| ||||||| |||||| ||||| | ||||||||| |||||||||||||||||||||
Sbjct: 1376 gcgattccataaggatccctaagtataaccatggcagggaagatgaaaccaatcaggaca 1317

                                                                        
Query: 430  gcagctgtagcaccagtgaactggaaggcgtcccagatgcttggtatgaagttggcagca 489
            ||||| || |||||||| |||||||| || ||||| ||||| ||||||||  ||||||||
Sbjct: 1316 gcagcagttgcaccagtaaactggaatgcatcccaaatgctcggtatgaaaatggcagca 1257

                                                                        
Query: 490  agataaatcacaacaaggagcgagacggtgataatggtaaaccttcggttgtcatgagaa 549
            |||||||| ||    ||||| ||||  ||||| |||| ||| ||   ||||||| |||||
Sbjct: 1256 agataaattactgtgaggagtgagatagtgattatggcaaatctcttgttgtcacgagaa 1197

                                                                        
Query: 550  atgtgccttgaggtggggaagaggagtccatccaggttgagcctaagggcaaagaagact 609
            ||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 1196 atgtgccttgatgtggggaagagcagtccatccaagttgagcctaagggcaaagaagact 1137

                                                              
Query: 610  atagggaagacaagcatgacatggactacatagctcactctgactatatc 659
            || || ||||||||||| || ||  |  ||||||||||||  ||||||||
Sbjct: 1136 atgggaaagacaagcataacgtgagcagcatagctcactcgcactatatc 1087
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  270 bits (136), Expect = 5e-69
 Identities = 232/264 (87%)
 Strand = Plus / Plus

                                                                           
Query: 387     cctgagtatgatcatggcaggaaagatgaaaccaatcaggacagcagctgtagcaccagt 446
               ||||||||||||||||||||||||||| ||||| || || ||||||||||| ||||| ||
Sbjct: 5059317 cctgagtatgatcatggcaggaaagataaaaccgataagaacagcagctgtggcaccggt 5059376

                                                                           
Query: 447     gaactggaaggcgtcccagatgcttggtatgaagttggcagcaagataaatcacaacaag 506
               ||| ||||| |||||||||||||| ||||||||| |||||||||||||||| ||| ||||
Sbjct: 5059377 gaattggaacgcgtcccagatgctcggtatgaagatggcagcaagataaattacagcaag 5059436

                                                                           
Query: 507     gagcgagacggtgataatggtaaaccttcggttgtcatgagaaatgtgccttgaggtggg 566
               ||| ||  | ||||||||||  ||||||| ||||||| |||||||||||||||  || ||
Sbjct: 5059437 gagtgatcccgtgataatggcgaaccttctgttgtcacgagaaatgtgccttgcagtagg 5059496

                                                                           
Query: 567     gaagaggagtccatccaggttgagcctaagggcaaagaagactatagggaagacaagcat 626
               |||||| ||||||||||  |||||||||||||| ||||||||||| || ||||| |||||
Sbjct: 5059497 gaagagcagtccatccaaattgagcctaagggcgaagaagactatgggaaagacgagcat 5059556

                                       
Query: 627     gacatggactacatagctcactct 650
               ||  ||||||||||||||||||||
Sbjct: 5059557 gatgtggactacatagctcactct 5059580



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 109/130 (83%), Gaps = 3/130 (2%)
 Strand = Plus / Plus

                                                                           
Query: 256     taggcctccaccttcctgt---agaagatgctcatcgcatcactgtacagggccactgaa 312
               ||||||||||| |||||||   ||| |||| |||  ||||| ||||| || ||||| |||
Sbjct: 5059083 taggcctccactttcctgtgaaagatgatgttcagtgcatcgctgtatagagccacagaa 5059142

                                                                           
Query: 313     ttggagagcacagcaagcacaatcatggttacagctaaaaccttatcgcgcttggttgcg 372
               || |||||||| |||||||||||||||||||  || |||| ||| |||||||||||||| 
Sbjct: 5059143 tttgagagcaccgcaagcacaatcatggttaaggccaaaatcttgtcgcgcttggttgca 5059202

                         
Query: 373     atcccataag 382
               || |||||||
Sbjct: 5059203 attccataag 5059212



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                    
Query: 86      agacaaatgcagcaaacaaaatcctttcaagtgtccaaaacaaaaattaatgg 138
               ||||||||||||||||  ||||||||||| ||||||| || |||||| |||||
Sbjct: 5058929 agacaaatgcagcaaatcaaatcctttcaggtgtccagaataaaaatcaatgg 5058981



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                            
Query: 442      ccagtgaactggaaggcgtcccagatgcttggtatgaagttggc 485
                |||||||||||||| |||||||| ||| | || | |||||||||
Sbjct: 30280265 ccagtgaactggaacgcgtcccaaatgttggggacgaagttggc 30280308
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>dbj|AP005849.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBb0031B09
          Length = 132729

 Score =  270 bits (136), Expect = 5e-69
 Identities = 232/264 (87%)
 Strand = Plus / Plus

                                                                          
Query: 387    cctgagtatgatcatggcaggaaagatgaaaccaatcaggacagcagctgtagcaccagt 446
              ||||||||||||||||||||||||||| ||||| || || ||||||||||| ||||| ||
Sbjct: 130443 cctgagtatgatcatggcaggaaagataaaaccgataagaacagcagctgtggcaccggt 130502

                                                                          
Query: 447    gaactggaaggcgtcccagatgcttggtatgaagttggcagcaagataaatcacaacaag 506
              ||| ||||| |||||||||||||| ||||||||| |||||||||||||||| ||| ||||
Sbjct: 130503 gaattggaacgcgtcccagatgctcggtatgaagatggcagcaagataaattacagcaag 130562

                                                                          
Query: 507    gagcgagacggtgataatggtaaaccttcggttgtcatgagaaatgtgccttgaggtggg 566
              ||| ||  | ||||||||||  ||||||| ||||||| |||||||||||||||  || ||
Sbjct: 130563 gagtgatcccgtgataatggcgaaccttctgttgtcacgagaaatgtgccttgcagtagg 130622

                                                                          
Query: 567    gaagaggagtccatccaggttgagcctaagggcaaagaagactatagggaagacaagcat 626
              |||||| ||||||||||  |||||||||||||| ||||||||||| || ||||| |||||
Sbjct: 130623 gaagagcagtccatccaaattgagcctaagggcgaagaagactatgggaaagacgagcat 130682

                                      
Query: 627    gacatggactacatagctcactct 650
              ||  ||||||||||||||||||||
Sbjct: 130683 gatgtggactacatagctcactct 130706



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 109/130 (83%), Gaps = 3/130 (2%)
 Strand = Plus / Plus

                                                                          
Query: 256    taggcctccaccttcctgt---agaagatgctcatcgcatcactgtacagggccactgaa 312
              ||||||||||| |||||||   ||| |||| |||  ||||| ||||| || ||||| |||
Sbjct: 130209 taggcctccactttcctgtgaaagatgatgttcagtgcatcgctgtatagagccacagaa 130268

                                                                          
Query: 313    ttggagagcacagcaagcacaatcatggttacagctaaaaccttatcgcgcttggttgcg 372
              || |||||||| |||||||||||||||||||  || |||| ||| |||||||||||||| 
Sbjct: 130269 tttgagagcaccgcaagcacaatcatggttaaggccaaaatcttgtcgcgcttggttgca 130328

                        
Query: 373    atcccataag 382
              || |||||||
Sbjct: 130329 attccataag 130338



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                   
Query: 86     agacaaatgcagcaaacaaaatcctttcaagtgtccaaaacaaaaattaatgg 138
              ||||||||||||||||  ||||||||||| ||||||| || |||||| |||||
Sbjct: 130055 agacaaatgcagcaaatcaaatcctttcaggtgtccagaataaaaatcaatgg 130107
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>dbj|AP005785.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0453H10
          Length = 133464

 Score =  270 bits (136), Expect = 5e-69
 Identities = 232/264 (87%)
 Strand = Plus / Plus

                                                                         
Query: 387   cctgagtatgatcatggcaggaaagatgaaaccaatcaggacagcagctgtagcaccagt 446
             ||||||||||||||||||||||||||| ||||| || || ||||||||||| ||||| ||
Sbjct: 19815 cctgagtatgatcatggcaggaaagataaaaccgataagaacagcagctgtggcaccggt 19874

                                                                         
Query: 447   gaactggaaggcgtcccagatgcttggtatgaagttggcagcaagataaatcacaacaag 506
             ||| ||||| |||||||||||||| ||||||||| |||||||||||||||| ||| ||||
Sbjct: 19875 gaattggaacgcgtcccagatgctcggtatgaagatggcagcaagataaattacagcaag 19934

                                                                         
Query: 507   gagcgagacggtgataatggtaaaccttcggttgtcatgagaaatgtgccttgaggtggg 566
             ||| ||  | ||||||||||  ||||||| ||||||| |||||||||||||||  || ||
Sbjct: 19935 gagtgatcccgtgataatggcgaaccttctgttgtcacgagaaatgtgccttgcagtagg 19994

                                                                         
Query: 567   gaagaggagtccatccaggttgagcctaagggcaaagaagactatagggaagacaagcat 626
             |||||| ||||||||||  |||||||||||||| ||||||||||| || ||||| |||||
Sbjct: 19995 gaagagcagtccatccaaattgagcctaagggcgaagaagactatgggaaagacgagcat 20054

                                     
Query: 627   gacatggactacatagctcactct 650
             ||  ||||||||||||||||||||
Sbjct: 20055 gatgtggactacatagctcactct 20078



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 109/130 (83%), Gaps = 3/130 (2%)
 Strand = Plus / Plus

                                                                         
Query: 256   taggcctccaccttcctgt---agaagatgctcatcgcatcactgtacagggccactgaa 312
             ||||||||||| |||||||   ||| |||| |||  ||||| ||||| || ||||| |||
Sbjct: 19581 taggcctccactttcctgtgaaagatgatgttcagtgcatcgctgtatagagccacagaa 19640

                                                                         
Query: 313   ttggagagcacagcaagcacaatcatggttacagctaaaaccttatcgcgcttggttgcg 372
             || |||||||| |||||||||||||||||||  || |||| ||| |||||||||||||| 
Sbjct: 19641 tttgagagcaccgcaagcacaatcatggttaaggccaaaatcttgtcgcgcttggttgca 19700

                       
Query: 373   atcccataag 382
             || |||||||
Sbjct: 19701 attccataag 19710



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                  
Query: 86    agacaaatgcagcaaacaaaatcctttcaagtgtccaaaacaaaaattaatgg 138
             ||||||||||||||||  ||||||||||| ||||||| || |||||| |||||
Sbjct: 19427 agacaaatgcagcaaatcaaatcctttcaggtgtccagaataaaaatcaatgg 19479
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  216 bits (109), Expect = 7e-53
 Identities = 223/261 (85%)
 Strand = Plus / Minus

                                                                            
Query: 399      catggcaggaaagatgaaaccaatcaggacagcagctgtagcaccagtgaactggaaggc 458
                ||||||||| |||||||||||||||||||||||||| || |||||||| |||||||| ||
Sbjct: 25309510 catggcagggaagatgaaaccaatcaggacagcagcagttgcaccagtaaactggaatgc 25309451

                                                                            
Query: 459      gtcccagatgcttggtatgaagttggcagcaagataaatcacaacaaggagcgagacggt 518
                 ||||| ||||| ||||||||  |||||||||||||||| ||    ||||| ||||  ||
Sbjct: 25309450 atcccaaatgctcggtatgaaaatggcagcaagataaattactgtgaggagtgagatagt 25309391

                                                                            
Query: 519      gataatggtaaaccttcggttgtcatgagaaatgtgccttgaggtggggaagaggagtcc 578
                ||| |||| ||| ||   ||||||| |||||||||||||||| ||||||||||| |||||
Sbjct: 25309390 gattatggcaaatctcttgttgtcacgagaaatgtgccttgatgtggggaagagcagtcc 25309331

                                                                            
Query: 579      atccaggttgagcctaagggcaaagaagactatagggaagacaagcatgacatggactac 638
                ||||| ||||||||||||||||||||||||||| || ||||||||||| || ||  |  |
Sbjct: 25309330 atccaagttgagcctaagggcaaagaagactatgggaaagacaagcataacgtgagcagc 25309271

                                     
Query: 639      atagctcactctgactatatc 659
                |||||||||||  ||||||||
Sbjct: 25309270 atagctcactcgcactatatc 25309250



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 70/80 (87%)
 Strand = Plus / Minus

                                                                            
Query: 310      gaattggagagcacagcaagcacaatcatggttacagctaaaaccttatcgcgcttggtt 369
                ||||||||||| ||||||||||| |||||||||||||| || | ||| || ||||||| |
Sbjct: 25309691 gaattggagaggacagcaagcacgatcatggttacagccaagatcttgtcacgcttggat 25309632

                                    
Query: 370      gcgatcccataagaatccct 389
                ||||| ||||||| ||||||
Sbjct: 25309631 gcgattccataaggatccct 25309612



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                    
Query: 427     acagcagctgtagcaccagtgaactggaaggcgtcccagatgcttggtatgaa 479
               |||||||| || |||||||| || |||||||| ||||||||||| || |||||
Sbjct: 9409135 acagcagcagttgcaccagtaaattggaaggcatcccagatgctcggaatgaa 9409083
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>dbj|AP004792.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0505A04
          Length = 159241

 Score =  216 bits (109), Expect = 7e-53
 Identities = 223/261 (85%)
 Strand = Plus / Minus

                                                                          
Query: 399    catggcaggaaagatgaaaccaatcaggacagcagctgtagcaccagtgaactggaaggc 458
              ||||||||| |||||||||||||||||||||||||| || |||||||| |||||||| ||
Sbjct: 128118 catggcagggaagatgaaaccaatcaggacagcagcagttgcaccagtaaactggaatgc 128059

                                                                          
Query: 459    gtcccagatgcttggtatgaagttggcagcaagataaatcacaacaaggagcgagacggt 518
               ||||| ||||| ||||||||  |||||||||||||||| ||    ||||| ||||  ||
Sbjct: 128058 atcccaaatgctcggtatgaaaatggcagcaagataaattactgtgaggagtgagatagt 127999

                                                                          
Query: 519    gataatggtaaaccttcggttgtcatgagaaatgtgccttgaggtggggaagaggagtcc 578
              ||| |||| ||| ||   ||||||| |||||||||||||||| ||||||||||| |||||
Sbjct: 127998 gattatggcaaatctcttgttgtcacgagaaatgtgccttgatgtggggaagagcagtcc 127939

                                                                          
Query: 579    atccaggttgagcctaagggcaaagaagactatagggaagacaagcatgacatggactac 638
              ||||| ||||||||||||||||||||||||||| || ||||||||||| || ||  |  |
Sbjct: 127938 atccaagttgagcctaagggcaaagaagactatgggaaagacaagcataacgtgagcagc 127879

                                   
Query: 639    atagctcactctgactatatc 659
              |||||||||||  ||||||||
Sbjct: 127878 atagctcactcgcactatatc 127858



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 70/80 (87%)
 Strand = Plus / Minus

                                                                          
Query: 310    gaattggagagcacagcaagcacaatcatggttacagctaaaaccttatcgcgcttggtt 369
              ||||||||||| ||||||||||| |||||||||||||| || | ||| || ||||||| |
Sbjct: 128299 gaattggagaggacagcaagcacgatcatggttacagccaagatcttgtcacgcttggat 128240

                                  
Query: 370    gcgatcccataagaatccct 389
              ||||| ||||||| ||||||
Sbjct: 128239 gcgattccataaggatccct 128220
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>ref|NM_123243.1| Arabidopsis thaliana amino acid permease/ amino acid-polyamine
            transporter AT5G38820 mRNA, complete cds
          Length = 1371

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                     
Query: 426  gacagcagctgtagcaccagtgaactggaaggcgtcccagatgcttggtatgaagtt 482
            ||||||||| || || ||||| || ||||| || ||||| |||||||||||||||||
Sbjct: 1191 gacagcagcagttgctccagtaaattggaaagcatcccaaatgcttggtatgaagtt 1135
to top
>ref|NM_185810.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1347

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                 
Query: 427  acagcagctgtagcaccagtgaactggaaggcgtcccagatgcttggtatgaa 479
            |||||||| || |||||||| || |||||||| ||||||||||| || |||||
Sbjct: 1166 acagcagcagttgcaccagtaaattggaaggcatcccagatgctcggaatgaa 1114
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>dbj|AP003044.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0038C05
          Length = 152941

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                   
Query: 427    acagcagctgtagcaccagtgaactggaaggcgtcccagatgcttggtatgaa 479
              |||||||| || |||||||| || |||||||| ||||||||||| || |||||
Sbjct: 137545 acagcagcagttgcaccagtaaattggaaggcatcccagatgctcggaatgaa 137493
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>dbj|AB009048.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K15E6
          Length = 71736

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                     
Query: 426  gacagcagctgtagcaccagtgaactggaaggcgtcccagatgcttggtatgaagtt 482
            ||||||||| || || ||||| || ||||| || ||||| |||||||||||||||||
Sbjct: 7399 gacagcagcagttgctccagtaaattggaaagcatcccaaatgcttggtatgaagtt 7343
to top
>dbj|AK120497.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013121D24, full
            insert sequence
          Length = 1985

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                 
Query: 427  acagcagctgtagcaccagtgaactggaaggcgtcccagatgcttggtatgaa 479
            |||||||| || |||||||| || |||||||| ||||||||||| || |||||
Sbjct: 1495 acagcagcagttgcaccagtaaattggaaggcatcccagatgctcggaatgaa 1443
to top
>dbj|AK099920.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116L21, full
            insert sequence
          Length = 1869

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                 
Query: 427  acagcagctgtagcaccagtgaactggaaggcgtcccagatgcttggtatgaa 479
            |||||||| || |||||||| || |||||||| ||||||||||| || |||||
Sbjct: 1427 acagcagcagttgcaccagtaaattggaaggcatcccagatgctcggaatgaa 1375
to top
>dbj|AK066102.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013051P03, full
            insert sequence
          Length = 1778

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                 
Query: 427  acagcagctgtagcaccagtgaactggaaggcgtcccagatgcttggtatgaa 479
            |||||||| || |||||||| || |||||||| ||||||||||| || |||||
Sbjct: 1363 acagcagcagttgcaccagtaaattggaaggcatcccagatgctcggaatgaa 1311
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                            
Query: 442      ccagtgaactggaaggcgtcccagatgcttggtatgaagttggc 485
                |||||||||||||| |||||||||||| | || | |||||||||
Sbjct: 15835137 ccagtgaactggaacgcgtcccagatgttggggacgaagttggc 15835094
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>dbj|AP005747.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0039E17
          Length = 144126

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                          
Query: 442    ccagtgaactggaaggcgtcccagatgcttggtatgaagttggc 485
              |||||||||||||| |||||||||||| | || | |||||||||
Sbjct: 120323 ccagtgaactggaacgcgtcccagatgttggggacgaagttggc 120280
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>dbj|AK109890.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-E04, full
           insert sequence
          Length = 1514

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 442 ccagtgaactggaaggcgtcccagatgcttggtatgaagttggc 485
           |||||||||||||| |||||||||||| | || | |||||||||
Sbjct: 322 ccagtgaactggaacgcgtcccagatgttggggacgaagttggc 365
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                           
Query: 442      ccagtgaactggaaggcgtcccagatg 468
                |||||||||||||| ||||||||||||
Sbjct: 24370072 ccagtgaactggaacgcgtcccagatg 24370046
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>dbj|AP003915.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1579_C03
          Length = 122851

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 442    ccagtgaactggaaggcgtcccagatg 468
              |||||||||||||| ||||||||||||
Sbjct: 103265 ccagtgaactggaacgcgtcccagatg 103239
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>emb|AL591136.20| Mouse DNA sequence from clone RP23-273P3 on chromosome 11 Contains the 5'
              end of a novel gene, two novel genes, the Taok1 gene for
              TAO kinase 1, a eukaryotic translation initiation factor 2
              subunit 1 alpha (Eif2s1) pseudogene, a ribosomal protein S2
              (Rps2) pseudogene, the Cryba1 gene for crystallin beta A1
              and two CpG islands, complete sequence
          Length = 220230

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Minus

                                           
Query: 85     aagacaaatgcagcaaacaaaatcctttc 113
              |||||||| ||||||||||||||||||||
Sbjct: 120383 aagacaaa-gcagcaaacaaaatcctttc 120356
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>gb|AC011497.6| Homo sapiens chromosome 19 clone CTB-50E14, complete sequence
          Length = 168586

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 302    gggccactgaattggagagcacagc 326
              |||||| ||||||||||||||||||
Sbjct: 134105 gggccagtgaattggagagcacagc 134081
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>gb|AC068561.2|AC068561 Mus musculus strain C57BL6/J chromosome 6 clone RP23-86H7, complete
             sequence
          Length = 230839

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 397   atcatggcaggaaagatgaaa 417
             |||||||||||||||||||||
Sbjct: 77435 atcatggcaggaaagatgaaa 77415
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>gb|AC153151.4| Mus musculus BAC clone RP23-82K6 from chromosome 13, complete sequence
          Length = 164635

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 552   gtgccttgaggtggggaagag 572
             |||||||||||||||||||||
Sbjct: 68085 gtgccttgaggtggggaagag 68105
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>gb|AC140397.2| Mus musculus BAC clone RP23-162E7 from chromosome 13, complete sequence
          Length = 233829

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 552   gtgccttgaggtggggaagag 572
             |||||||||||||||||||||
Sbjct: 18843 gtgccttgaggtggggaagag 18823
to top
>gb|AC158647.2| Mus musculus 6 BAC RP23-275N13 (Roswell Park Cancer Institute
            (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 208007

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 397  atcatggcaggaaagatgaaa 417
            |||||||||||||||||||||
Sbjct: 3973 atcatggcaggaaagatgaaa 3953
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>gb|AY362040.1| Alpha proteobacterium F11 16S ribosomal RNA gene, partial sequence
          Length = 1449

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 550 atgtgccttgaggtggggaa 569
           ||||||||||||||||||||
Sbjct: 103 atgtgccttgaggtggggaa 122
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>gb|AY673139.1| Phyllobacteriaceae bacterium Ellin5412 16S ribosomal RNA gene,
           partial sequence
          Length = 416

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 550 atgtgccttgaggtggggaa 569
           ||||||||||||||||||||
Sbjct: 85  atgtgccttgaggtggggaa 104
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>ref|NM_189523.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1733

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 419  caatcaggacagcagctgta 438
            ||||||||||||||||||||
Sbjct: 1671 caatcaggacagcagctgta 1690
to top
>ref|XM_467580.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1935

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                        
Query: 442  ccagtgaactggaaggcgtcccagatgcttggtatgaagttggc 485
            |||||||||||||| |||||||| ||| | || | |||||||||
Sbjct: 1380 ccagtgaactggaacgcgtcccaaatgttggggacgaagttggc 1337
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>gb|AC121311.16| Mus musculus chromosome 3, clone RP24-317L5, complete sequence
          Length = 221261

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 191    aatcattccgaattgtgcat 210
              ||||||||||||||||||||
Sbjct: 121333 aatcattccgaattgtgcat 121352
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>gb|AC112949.9| Mus musculus chromosome 17, clone RP23-294D3, complete sequence
          Length = 169739

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 421   atcaggacagcagctgtagc 440
             ||||||||||||||||||||
Sbjct: 12208 atcaggacagcagctgtagc 12227
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>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 454     aaggcgtcccagatgcttgg 473
               ||||||||||||||||||||
Sbjct: 2153323 aaggcgtcccagatgcttgg 2153342
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>gb|AC123850.3| Mus musculus BAC clone RP23-319K22 from chromosome 5, complete sequence
          Length = 200934

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 113   caagtgtccaaaacaaaaat 132
             ||||||||||||||||||||
Sbjct: 43913 caagtgtccaaaacaaaaat 43932
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>gb|AC107792.10| Mus musculus chromosome 17, clone RP23-83F8, complete sequence
          Length = 253013

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 421   atcaggacagcagctgtagc 440
             ||||||||||||||||||||
Sbjct: 12971 atcaggacagcagctgtagc 12952
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>gb|AC127351.3| Mus musculus BAC clone RP23-66K20 from chromosome 5, complete sequence
          Length = 238781

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 113    caagtgtccaaaacaaaaat 132
              ||||||||||||||||||||
Sbjct: 126748 caagtgtccaaaacaaaaat 126767
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>gb|AC127694.3| Mus musculus BAC clone RP23-235J3 from chromosome 7, complete sequence
          Length = 225732

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 560    aggtggggaagaggagtcca 579
              ||||||||||||||||||||
Sbjct: 190370 aggtggggaagaggagtcca 190351
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>gb|AC132392.3| Mus musculus BAC clone RP23-386F15 from chromosome 7, complete
            sequence
          Length = 208499

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 560  aggtggggaagaggagtcca 579
            ||||||||||||||||||||
Sbjct: 7887 aggtggggaagaggagtcca 7868
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>emb|CR702608.1|CNS0G530 Tetraodon nigroviridis full-length cDNA
          Length = 1212

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 426 gacagcagctgtagcaccag 445
           ||||||||||||||||||||
Sbjct: 830 gacagcagctgtagcaccag 849
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>emb|CR692907.2|CNS0FXLJ Tetraodon nigroviridis full-length cDNA
          Length = 1247

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 426 gacagcagctgtagcaccag 445
           ||||||||||||||||||||
Sbjct: 831 gacagcagctgtagcaccag 850
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>emb|CR689251.1|CNS0FURZ Tetraodon nigroviridis full-length cDNA
          Length = 1250

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 426 gacagcagctgtagcaccag 445
           ||||||||||||||||||||
Sbjct: 836 gacagcagctgtagcaccag 855
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>gb|AC148154.15| Medicago truncatula clone mth2-17a6, complete sequence
          Length = 138465

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 333    aatcatggttacagctaaaa 352
              ||||||||||||||||||||
Sbjct: 102143 aatcatggttacagctaaaa 102162
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>emb|AL592431.15| Human DNA sequence from clone RP11-145M4 on chromosome 1 Contains part
             of a novel gene and three novel genes, complete sequence
          Length = 48658

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 554   gccttgaggtggggaagagg 573
             ||||||||||||||||||||
Sbjct: 23430 gccttgaggtggggaagagg 23449
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>gb|AF008564.1| Alpha proteobacterium FH6 16S ribosomal RNA gene, complete sequence
          Length = 1942

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 550  atgtgccttgaggtggggaa 569
            ||||||||||||||||||||
Sbjct: 1840 atgtgccttgaggtggggaa 1821
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>ref|XM_793013.1| PREDICTED: Strongylocentrotus purpuratus similar to likely ortholog
            of mouse ubiquitin-conjugating enzyme E2-230K
            (LOC593542), mRNA
          Length = 4176

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 232  ggagtatggaggcatggagc 251
            ||||||||||||||||||||
Sbjct: 4086 ggagtatggaggcatggagc 4067
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>emb|CR382121.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome A of strain NRRL
              Y-1140 of Kluyveromyces lactis
          Length = 1062590

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 274    tagaagatgctcatcgcatc 293
              ||||||||||||||||||||
Sbjct: 963607 tagaagatgctcatcgcatc 963626
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>emb|CR931802.8| Zebrafish DNA sequence from clone CH211-223A10 in linkage group 13,
             complete sequence
          Length = 136909

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 113   caagtgtccaaaacaaaaat 132
             ||||||||||||||||||||
Sbjct: 68212 caagtgtccaaaacaaaaat 68231
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>gb|AC024940.39| Homo sapiens 12 BAC RP11-627K11 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 205952

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 303    ggccactgaattggagagca 322
              ||||||||||||||||||||
Sbjct: 153697 ggccactgaattggagagca 153716
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>gb|DQ417335.1| Labrys sp. Liujia-146 16S ribosomal RNA gene, partial sequence
          Length = 1380

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 550 atgtgccttgaggtggggaa 569
           ||||||||||||||||||||
Sbjct: 54  atgtgccttgaggtggggaa 73
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>dbj|AB236172.1| Labrys methylaminiphilus gene for 16S rRNA, partial sequence,
           strain:DSM16812
          Length = 1409

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 550 atgtgccttgaggtggggaa 569
           ||||||||||||||||||||
Sbjct: 85  atgtgccttgaggtggggaa 104
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>gb|AC006432.15| Homo sapiens 12p13 PAC RPCI11-726G1 (Roswell Park Cancer Institute Human
              PAC Library) complete sequence
          Length = 180685

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 303    ggccactgaattggagagca 322
              ||||||||||||||||||||
Sbjct: 117804 ggccactgaattggagagca 117785
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>dbj|AK143144.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched
            library, clone:E130115N02 product:unclassifiable, full
            insert sequence
          Length = 1647

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 560  aggtggggaagaggagtcca 579
            ||||||||||||||||||||
Sbjct: 1143 aggtggggaagaggagtcca 1162
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>gb|AC093886.2| Homo sapiens BAC clone RP11-666L21 from 4, complete sequence
          Length = 174332

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 186   tcaataatcattccgaattgtgca 209
             |||||||||| |||||||||||||
Sbjct: 32066 tcaataatcagtccgaattgtgca 32089
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>gb|AC010746.8| Homo sapiens BAC clone RP11-550E21 from 2, complete sequence
          Length = 229379

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 117   tgtccaaaacaaaaattaat 136
             ||||||||||||||||||||
Sbjct: 58662 tgtccaaaacaaaaattaat 58681
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 419     caatcaggacagcagctgta 438
               ||||||||||||||||||||
Sbjct: 4050947 caatcaggacagcagctgta 4050928
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>gb|AC092821.11| Homo sapiens 12 BAC RP11-525E9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 121181

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 303   ggccactgaattggagagca 322
             ||||||||||||||||||||
Sbjct: 75849 ggccactgaattggagagca 75868
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>gb|AC131945.1| Homo sapiens BAC clone RP11-5K24 from 4, complete sequence
          Length = 135190

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 186   tcaataatcattccgaattgtgca 209
             |||||||||| |||||||||||||
Sbjct: 93838 tcaataatcagtccgaattgtgca 93861
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>gb|AY766152.1| Labrys methylaminiphilus 16S ribosomal RNA gene, partial sequence
          Length = 1405

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 550 atgtgccttgaggtggggaa 569
           ||||||||||||||||||||
Sbjct: 105 atgtgccttgaggtggggaa 124
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>dbj|AP002903.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0509B06
          Length = 104515

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 419   caatcaggacagcagctgta 438
             ||||||||||||||||||||
Sbjct: 17690 caatcaggacagcagctgta 17671
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>gb|AC012156.14|AC012156 Homo sapiens 12p11-37.2-54.4 BAC RP11-433D24 (Rosewell Park Cancer
             Institute Human Bac Library) complete sequence
          Length = 162200

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 303   ggccactgaattggagagca 322
             ||||||||||||||||||||
Sbjct: 35644 ggccactgaattggagagca 35625
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>emb|BX682230.4| Mouse DNA sequence from clone RP23-236D21 on chromosome X, complete
             sequence
          Length = 61120

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   ccaaaacaaaaattaatgga 139
             ||||||||||||||||||||
Sbjct: 39660 ccaaaacaaaaattaatgga 39641
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>gb|AY635896.1| Labrys sp. AMS5 16S ribosomal RNA gene, partial sequence
          Length = 1012

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 550 atgtgccttgaggtggggaa 569
           ||||||||||||||||||||
Sbjct: 89  atgtgccttgaggtggggaa 108
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>dbj|AP005284.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1121A12
          Length = 138796

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                         
Query: 442   ccagtgaactggaaggcgtcccagatgcttggtatgaagttggc 485
             |||||||||||||| |||||||| ||| | || | |||||||||
Sbjct: 81182 ccagtgaactggaacgcgtcccaaatgttggggacgaagttggc 81225
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>dbj|AK120458.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013105O22, full
            insert sequence
          Length = 2063

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 419  caatcaggacagcagctgta 438
            ||||||||||||||||||||
Sbjct: 2014 caatcaggacagcagctgta 2033
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>gb|DQ337554.1| Labrys methylaminiphilus 16S ribosomal RNA gene, partial sequence
          Length = 1448

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 550 atgtgccttgaggtggggaa 569
           ||||||||||||||||||||
Sbjct: 105 atgtgccttgaggtggggaa 124
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>dbj|AK069154.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023006P21, full
            insert sequence
          Length = 1935

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                        
Query: 442  ccagtgaactggaaggcgtcccagatgcttggtatgaagttggc 485
            |||||||||||||| |||||||| ||| | || | |||||||||
Sbjct: 1380 ccagtgaactggaacgcgtcccaaatgttggggacgaagttggc 1337
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>dbj|AK067702.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119N03, full
            insert sequence
          Length = 1734

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 419  caatcaggacagcagctgta 438
            ||||||||||||||||||||
Sbjct: 1672 caatcaggacagcagctgta 1691
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>gb|AY769909.1| Burkholderia sp. S8 16S ribosomal RNA gene, partial sequence
          Length = 967

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 550 atgtgccttgaggtggggaa 569
           ||||||||||||||||||||
Sbjct: 48  atgtgccttgaggtggggaa 67
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>gb|U22525.1|KLU22525 Kluyveromyces lactis high affinity glucose transporter (HGT1) gene,
           complete cds
          Length = 2425

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 274 tagaagatgctcatcgcatc 293
           ||||||||||||||||||||
Sbjct: 62  tagaagatgctcatcgcatc 81


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,464,289
Number of Sequences: 3902068
Number of extensions: 6464289
Number of successful extensions: 116859
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 116453
Number of HSP's gapped (non-prelim): 395
length of query: 659
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 636
effective length of database: 17,143,297,704
effective search space: 10903137339744
effective search space used: 10903137339744
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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