>YK82_YEAST (P36170) Hypothetical protein YKR102W precursor|
          Length = 1169

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = -3

Query: 417 AKKRRRRVNGCSDQGK*NTFKQLYSTNCTPTTVSLAMVDYFFPP 286
           + K  +R N   DQG       L+    TPT V++ M  YF PP
Sbjct: 126 SSKTEKRENDDCDQGAAYWSSDLFGFYTTPTNVTVEMTGYFLPP 169

>JAM1_FELCA (Q2WGK2) Junctional adhesion molecule A precursor (JAM-A)|
           (Junctional adhesion molecule 1) (JAM-1) (CD321 antigen)
          Length = 298

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 8/62 (12%)
 Frame = +1

Query: 319 DRGGSTVGTVQLLKCVLLPLVTASIHTPSP--------FLCLQRRGANPWSFACTRQGMH 474
           D GG+T G V +   VL+P    ++H PS           C ++ G+ P  +   + G+ 
Sbjct: 112 DDGGNTYGEVSVQLTVLVPPSKPTVHIPSSATIGSRAVLTCSEKDGSPPSEYYWFKDGVR 171

Query: 475 LP 480
           +P
Sbjct: 172 MP 173

>JAM1_BOVIN (Q9XT56) Junctional adhesion molecule A precursor (JAM-A)|
           (Junctional adhesion molecule 1) (JAM-1) (CD321 antigen)
          Length = 298

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 8/62 (12%)
 Frame = +1

Query: 319 DRGGSTVGTVQLLKCVLLPLVTASIHTPSP--------FLCLQRRGANPWSFACTRQGMH 474
           D GG+T G V +   VL+P    +I+ PS           C +R G+ P  +   + G+ 
Sbjct: 112 DEGGNTYGEVTVQLIVLVPPSKPTINVPSSVTIGTRAVLTCSERDGSPPSEYKWFKDGVE 171

Query: 475 LP 480
           +P
Sbjct: 172 MP 173

>LRP6_MOUSE (O88572) Low-density lipoprotein receptor-related protein 6 precursor|
          Length = 1613

 Score = 29.6 bits (65), Expect = 9.3
 Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
 Frame = +3

Query: 378  GHCIHSHAFSFSLPSKTRCESMVLRMHPAGHAFAPQADQNHNTGVGPTDHPPS----FPR 545
            G+  H  + S SLP  +R +SM+  +   G +  P  D+ H TG   +    +    FP 
Sbjct: 1424 GYVPHPSSLSGSLPGMSRGKSMISSLSIMGGSSGPPYDRAHVTGASSSSSSSTKGTYFPA 1483

Query: 546  LL 551
            +L
Sbjct: 1484 IL 1485

>LRP6_HUMAN (O75581) Low-density lipoprotein receptor-related protein 6 precursor|
          Length = 1613

 Score = 29.6 bits (65), Expect = 9.3
 Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
 Frame = +3

Query: 378  GHCIHSHAFSFSLPSKTRCESMVLRMHPAGHAFAPQADQNHNTGVGPTDHPPS----FPR 545
            G+  H  + S SLP  +R +SM+  +   G +  P  D+ H TG   +    +    FP 
Sbjct: 1424 GYVPHPSSLSGSLPGMSRGKSMISSLSIMGGSSGPPYDRAHVTGASSSSSSSTKGTYFPA 1483

Query: 546  LL 551
            +L
Sbjct: 1484 IL 1485


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,281,704
Number of Sequences: 219361
Number of extensions: 2287280
Number of successful extensions: 5670
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5662
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7026286028
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)