ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd16n12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY090551.1| Deschampsia antarctica clone Dacor 1.1 cytochrome c1 precursor mRNA, 3' UTR and partial cds Length = 418 Score = 515 bits (260), Expect = e-143 Identities = 369/404 (91%), Gaps = 1/404 (0%) Strand = Plus / Minus Query: 171 aaataactgctcccttaagagaaatgcttttgcagcagaggaagaaaacaaaagagattg 230 |||||||||||||||| ||||||||||||||||||||| || ||||||| |||| ||| Sbjct: 403 aaataactgctcccttg-gagaaatgcttttgcagcagaagaggaaaacagaagaaattc 345 Query: 231 tacccaaggtatgatgggagacaaccagagtagcaaaatatacaacggaaagtccttatt 290 || || || |||||||||||||||| ||| ||||||| |||||| ||||||| ||||| Sbjct: 344 taggcaggggatgatgggagacaaccccagtggcaaaatgtacaacagaaagtcattatt 285 Query: 291 tcgatcgcttctgcttaaagactcgatgttgcaatagaaagaagaaacaatggtcactag 350 ||||| |||||||||||||||||| | |||| | || ||||||||||||||||||| || Sbjct: 284 tcgatagcttctgcttaaagactcaacgttgtagtaaaaagaagaaacaatggtcatcag 225 Query: 351 ttgacgacgtccaggaccagcttgcgggacttgaggacagaccacctcatgcgacggtag 410 |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 224 ttgacgacatccaggaccagcttgcgggacttgaggaccgaccacctcatgcgacggtag 165 Query: 411 tatgcggcttggagaagagcaagtgacagtaggaagatccatttgacacccatcagtttc 470 ||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 tatgcagcttggataagtgcaagtgacagtaggaagatccatttgacacccatcagtttc 105 Query: 471 ctctcttccatttcaggctcagctgcccacgacaagaacgacacgacatccttgcccatc 530 ||||||||||||||||||||||| ||||| |||||||| ||||| ||||||||||||||| Sbjct: 104 ctctcttccatttcaggctcagccgcccatgacaagaatgacacaacatccttgcccatc 45 Query: 531 tgggcttcagttgcaggagtaccatcttcatactcaatagctcc 574 ||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 44 tgggcttcagttgcaggagtaccatcttcatactcaacagctcc 1
>dbj|AK070578.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061F14, full insert sequence Length = 1367 Score = 418 bits (211), Expect = e-114 Identities = 281/303 (92%), Gaps = 1/303 (0%) Strand = Plus / Minus Query: 332 aagaaacaatggtcact-agttgacgacgtccaggaccagcttgcgggacttgaggacag 390 |||||||| ||||| || ||||||| || || |||||||||||||| ||||| ||||| | Sbjct: 1135 aagaaacagtggtccctcagttgacaacatcaaggaccagcttgcgtgacttcaggacgg 1076 Query: 391 accacctcatgcgacggtagtatgcggcttggagaagagcaagtgacagtaggaagatcc 450 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1075 accacctcatgcgacggtagtatgcggcttggagaagtgcaagtgacagtaggaagatcc 1016 Query: 451 atttgacacccatcagtttcctctcttccatttcaggctcagctgcccacgacaagaacg 510 |||| || ||||||||||||||||||||||| ||||| ||||||||||| |||||||||| Sbjct: 1015 atttcactcccatcagtttcctctcttccatctcaggttcagctgcccatgacaagaacg 956 Query: 511 acacgacatccttgcccatctgggcttcagttgcaggagtaccatcttcatactcaatag 570 | ||||||||||||||||||||||||||||| |||||||||||||||||||| |||| || Sbjct: 955 aaacgacatccttgcccatctgggcttcagtggcaggagtaccatcttcatattcaacag 896 Query: 571 ctccatccataagcatcttaggcatggctatggcaccaccagggaagtagggattgtaat 630 ||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct: 895 ctccatctataagcatcttgggcatagctatggcaccaccagggaagtagggattgtaat 836 Query: 631 gca 633 ||| Sbjct: 835 gca 833 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 192 aaatgcttttgcagcagaggaagaaaaca 220 ||||||||||||||||||||||||||||| Sbjct: 1262 aaatgcttttgcagcagaggaagaaaaca 1234
>gb|BT016510.1| Zea mays clone Contig343 mRNA sequence Length = 1417 Score = 351 bits (177), Expect = 2e-93 Identities = 261/289 (90%) Strand = Plus / Minus Query: 349 agttgacgacgtccaggaccagcttgcgggacttgaggacagaccacctcatgcgacggt 408 |||||||||| |||||||||||||| |||||||| ||||| |||||||||||||| |||| Sbjct: 1034 agttgacgacatccaggaccagctttcgggacttcaggactgaccacctcatgcggcggt 975 Query: 409 agtatgcggcttggagaagagcaagtgacagtaggaagatccatttgacacccatcagtt 468 |||| || ||||||||||| || ||||| ||||| ||||||||||| || |||||||| | Sbjct: 974 agtaggcagcttggagaagcgctagtgatagtagaaagatccatttcactcccatcagct 915 Query: 469 tcctctcttccatttcaggctcagctgcccacgacaagaacgacacgacatccttgccca 528 | ||||||||||| |||||||||||||||||||| | ||| || ||||||||||| |||| Sbjct: 914 ttctctcttccatctcaggctcagctgcccacgaaaggaatgatacgacatccttaccca 855 Query: 529 tctgggcttcagttgcaggagtaccatcttcatactcaatagctccatccataagcatct 588 ||||||||||||||||||| |||||||| |||||||||| ||||||||| ||||||||| Sbjct: 854 tctgggcttcagttgcaggtgtaccatcctcatactcaacagctccatcattaagcatct 795 Query: 589 taggcatggctatggcaccaccagggaagtagggattgtaatgcagacc 637 | |||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 794 tcggcatggctatggcaccaccagggaagtagggattgtagtgcagacc 746
>gb|AY103572.1| Zea mays PCO092029 mRNA sequence Length = 1394 Score = 311 bits (157), Expect = 2e-81 Identities = 256/289 (88%) Strand = Plus / Minus Query: 349 agttgacgacgtccaggaccagcttgcgggacttgaggacagaccacctcatgcgacggt 408 ||||||| || |||||||||||||| |||||||| | ||| |||||||||||||| |||| Sbjct: 1078 agttgacaacatccaggaccagcttacgggacttcaagactgaccacctcatgcggcggt 1019 Query: 409 agtatgcggcttggagaagagcaagtgacagtaggaagatccatttgacacccatcagtt 468 ||||||| ||||| ||||| || ||||| ||||| ||||||||||| || |||||||| | Sbjct: 1018 agtatgcagcttgaagaagcgctagtgatagtagaaagatccatttcactcccatcagct 959 Query: 469 tcctctcttccatttcaggctcagctgcccacgacaagaacgacacgacatccttgccca 528 | ||||||||||| ||||||||||||||||| || | ||| || || |||||||| |||| Sbjct: 958 ttctctcttccatctcaggctcagctgcccatgaaaggaatgatacaacatccttaccca 899 Query: 529 tctgggcttcagttgcaggagtaccatcttcatactcaatagctccatccataagcatct 588 |||||||||||||||||||||||||||| |||||||||| ||||||||| | ||||||| Sbjct: 898 tctgggcttcagttgcaggagtaccatcctcatactcaacagctccatcattgagcatct 839 Query: 589 taggcatggctatggcaccaccagggaagtagggattgtaatgcagacc 637 | |||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 838 tgggcatggctatggcaccaccagggaagtaggggttgtagtgcagacc 790
>ref|NM_190059.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 915 Score = 260 bits (131), Expect = 5e-66 Identities = 236/271 (87%) Strand = Plus / Minus Query: 363 aggaccagcttgcgggacttgaggacagaccacctcatgcgacggtagtatgcggcttgg 422 |||||||||||||| |||||| ||| |||||| ||||||| ||||| ||||| ||||| Sbjct: 899 aggaccagcttgcgcgacttgtagacggaccacttcatgcgccggtaatatgcagcttgc 840 Query: 423 agaagagcaagtgacagtaggaagatccatttgacacccatcagtttcctctcttccatt 482 ||||| || || || ||||| || |||||||| || ||||||||||| ||||||||||| Sbjct: 839 agaagtgcgagggagagtagaaaaatccatttcactcccatcagttttctctcttccatc 780 Query: 483 tcaggctcagctgcccacgacaagaacgacacgacatccttgcccatctgggcttcagtt 542 |||||||| || ||||| ||||||||||| || ||||| || |||||||||||||| || Sbjct: 779 tcaggctccgccgcccatgacaagaacgagacaacatcttttcccatctgggcttctgta 720 Query: 543 gcaggagtaccatcttcatactcaatagctccatccataagcatcttaggcatggctatg 602 || ||||| |||||||||||||| | |||||||| ||||||||||| |||||||||||| Sbjct: 719 gctggagtgccatcttcatactcgactgctccatcaataagcatcttgggcatggctatg 660 Query: 603 gcaccaccagggaagtagggattgtaatgca 633 ||||||||||||||||||||||||||||||| Sbjct: 659 gcaccaccagggaagtagggattgtaatgca 629
>dbj|AK069403.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023013M20, full insert sequence Length = 1379 Score = 260 bits (131), Expect = 5e-66 Identities = 236/271 (87%) Strand = Plus / Minus Query: 363 aggaccagcttgcgggacttgaggacagaccacctcatgcgacggtagtatgcggcttgg 422 |||||||||||||| |||||| ||| |||||| ||||||| ||||| ||||| ||||| Sbjct: 1047 aggaccagcttgcgcgacttgtagacggaccacttcatgcgccggtaatatgcagcttgc 988 Query: 423 agaagagcaagtgacagtaggaagatccatttgacacccatcagtttcctctcttccatt 482 ||||| || || || ||||| || |||||||| || ||||||||||| ||||||||||| Sbjct: 987 agaagtgcgagggagagtagaaaaatccatttcactcccatcagttttctctcttccatc 928 Query: 483 tcaggctcagctgcccacgacaagaacgacacgacatccttgcccatctgggcttcagtt 542 |||||||| || ||||| ||||||||||| || ||||| || |||||||||||||| || Sbjct: 927 tcaggctccgccgcccatgacaagaacgagacaacatcttttcccatctgggcttctgta 868 Query: 543 gcaggagtaccatcttcatactcaatagctccatccataagcatcttaggcatggctatg 602 || ||||| |||||||||||||| | |||||||| ||||||||||| |||||||||||| Sbjct: 867 gctggagtgccatcttcatactcgactgctccatcaataagcatcttgggcatggctatg 808 Query: 603 gcaccaccagggaagtagggattgtaatgca 633 ||||||||||||||||||||||||||||||| Sbjct: 807 gcaccaccagggaagtagggattgtaatgca 777
>gb|BT012926.1| Lycopersicon esculentum clone 114089R, mRNA sequence Length = 1382 Score = 220 bits (111), Expect = 4e-54 Identities = 231/271 (85%) Strand = Plus / Minus Query: 349 agttgacgacgtccaggaccagcttgcgggacttgaggacagaccacctcatgcgacggt 408 ||||||| || || ||||||| ||||| || || ||||||||||| |||| |||||||| Sbjct: 1130 agttgacaacatcgaggaccaatttgcgagatttcaggacagaccatctcaggcgacggt 1071 Query: 409 agtatgcggcttggagaagagcaagtgacagtaggaagatccatttgacacccatcagtt 468 |||| || ||||||||||| |||||||| | | ||| |||||||||| ||||||||| | Sbjct: 1070 agtaagctgcttggagaagtgcaagtgataagacgaatatccatttgaaacccatcagct 1011 Query: 469 tcctctcttccatttcaggctcagctgcccacgacaagaacgacacgacatccttgccca 528 | |||||||||||||| |||||||| ||||| |||||||||||||| ||||| || |||| Sbjct: 1010 ttctctcttccatttctggctcagcagcccatgacaagaacgacacaacatcttttccca 951 Query: 529 tctgggcttcagttgcaggagtaccatcttcatactcaatagctccatccataagcatct 588 | || || ||||||||||| |||||||||||||||||| ||| ||||| ||||||| | Sbjct: 950 tttgtgcctcagttgcaggtataccatcttcatactcaacagcaccatcattaagcattt 891 Query: 589 taggcatggctatggcaccaccagggaagta 619 ||||||| ||||| || |||||||||||||| Sbjct: 890 taggcattgctatagctccaccagggaagta 860
>gb|AY805120.1| Ornithogalum virens clone 3OvF39 putative cytochrome c1 precursor protein mRNA, partial cds Length = 923 Score = 208 bits (105), Expect = 2e-50 Identities = 228/269 (84%) Strand = Plus / Minus Query: 366 accagcttgcgggacttgaggacagaccacctcatgcgacggtagtatgcggcttggaga 425 ||||||||||| ||||||| ||||||||||| || |||||||| ||| | ||||| || Sbjct: 539 accagcttgcgtgacttgaagacagaccaccgcaaacgacggtaatatccagcttgaagg 480 Query: 426 agagcaagtgacagtaggaagatccatttgacacccatcagtttcctctcttccatttca 485 || || ||||| || | ||| |||||||||| ||||||||||| | ||||||||| || Sbjct: 479 agcgccagtgatagcacgaaaatccatttgaatcccatcagtttgcgctcttccatctcg 420 Query: 486 ggctcagctgcccacgacaagaacgacacgacatccttgcccatctgggcttcagttgca 545 ||||| ||||||||||| || || || ||||| ||||| |||||||| |||||||||||| Sbjct: 419 ggctccgctgcccacgataaaaatgaaacgacgtccttccccatctgagcttcagttgca 360 Query: 546 ggagtaccatcttcatactcaatagctccatccataagcatcttaggcatggctatggca 605 || ||||||||||||||||| | ||||||||| |||||||| || ||||| ||||| ||| Sbjct: 359 ggggtaccatcttcatactctaaagctccatctataagcattttgggcatagctatagca 300 Query: 606 ccaccagggaagtagggattgtaatgcag 634 |||||||| ||||| |||||||| ||||| Sbjct: 299 ccaccaggaaagtatggattgtagtgcag 271
>gb|AC093953.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OJ1057_C01, complete sequence Length = 142752 Score = 163 bits (82), Expect = 9e-37 Identities = 122/134 (91%), Gaps = 1/134 (0%) Strand = Plus / Plus Query: 332 aagaaacaatggtcact-agttgacgacgtccaggaccagcttgcgggacttgaggacag 390 |||||||| ||||| || ||||||| || || |||||||||||||| ||||| ||||| | Sbjct: 93295 aagaaacagtggtccctcagttgacaacatcaaggaccagcttgcgtgacttcaggacgg 93354 Query: 391 accacctcatgcgacggtagtatgcggcttggagaagagcaagtgacagtaggaagatcc 450 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 93355 accacctcatgcgacggtagtatgcggcttggagaagtgcaagtgacagtaggaagatcc 93414 Query: 451 atttgacacccatc 464 |||| || |||||| Sbjct: 93415 atttcactcccatc 93428 Score = 159 bits (80), Expect = 1e-35 Identities = 98/104 (94%) Strand = Plus / Plus Query: 530 ctgggcttcagttgcaggagtaccatcttcatactcaatagctccatccataagcatctt 589 |||||||||||| |||||||||||||||||||| |||| ||||||||| ||||||||||| Sbjct: 93672 ctgggcttcagtggcaggagtaccatcttcatattcaacagctccatctataagcatctt 93731 Query: 590 aggcatggctatggcaccaccagggaagtagggattgtaatgca 633 ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 93732 gggcatagctatggcaccaccagggaagtagggattgtaatgca 93775 Score = 105 bits (53), Expect = 2e-19 Identities = 65/69 (94%) Strand = Plus / Plus Query: 464 cagtttcctctcttccatttcaggctcagctgcccacgacaagaacgacacgacatcctt 523 |||||||||||||||||| ||||| ||||||||||| ||||||||||| ||||||||||| Sbjct: 93512 cagtttcctctcttccatctcaggttcagctgcccatgacaagaacgaaacgacatcctt 93571 Query: 524 gcccatctg 532 ||||||||| Sbjct: 93572 gcccatctg 93580 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 192 aaatgcttttgcagcagaggaagaaaaca 220 ||||||||||||||||||||||||||||| Sbjct: 93168 aaatgcttttgcagcagaggaagaaaaca 93196 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 115 ttctgttagaagtatgttggtaccattcaggta 147 |||||||||||| || |||||||||||||||| Sbjct: 93101 ttctgttagaagcttgctggtaccattcaggta 93133
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 163 bits (82), Expect = 9e-37 Identities = 122/134 (91%), Gaps = 1/134 (0%) Strand = Plus / Plus Query: 332 aagaaacaatggtcact-agttgacgacgtccaggaccagcttgcgggacttgaggacag 390 |||||||| ||||| || ||||||| || || |||||||||||||| ||||| ||||| | Sbjct: 13409832 aagaaacagtggtccctcagttgacaacatcaaggaccagcttgcgtgacttcaggacgg 13409891 Query: 391 accacctcatgcgacggtagtatgcggcttggagaagagcaagtgacagtaggaagatcc 450 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 13409892 accacctcatgcgacggtagtatgcggcttggagaagtgcaagtgacagtaggaagatcc 13409951 Query: 451 atttgacacccatc 464 |||| || |||||| Sbjct: 13409952 atttcactcccatc 13409965 Score = 159 bits (80), Expect = 1e-35 Identities = 98/104 (94%) Strand = Plus / Plus Query: 530 ctgggcttcagttgcaggagtaccatcttcatactcaatagctccatccataagcatctt 589 |||||||||||| |||||||||||||||||||| |||| ||||||||| ||||||||||| Sbjct: 13410209 ctgggcttcagtggcaggagtaccatcttcatattcaacagctccatctataagcatctt 13410268 Query: 590 aggcatggctatggcaccaccagggaagtagggattgtaatgca 633 ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 13410269 gggcatagctatggcaccaccagggaagtagggattgtaatgca 13410312 Score = 105 bits (53), Expect = 2e-19 Identities = 65/69 (94%) Strand = Plus / Plus Query: 464 cagtttcctctcttccatttcaggctcagctgcccacgacaagaacgacacgacatcctt 523 |||||||||||||||||| ||||| ||||||||||| ||||||||||| ||||||||||| Sbjct: 13410049 cagtttcctctcttccatctcaggttcagctgcccatgacaagaacgaaacgacatcctt 13410108 Query: 524 gcccatctg 532 ||||||||| Sbjct: 13410109 gcccatctg 13410117 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 192 aaatgcttttgcagcagaggaagaaaaca 220 ||||||||||||||||||||||||||||| Sbjct: 13409705 aaatgcttttgcagcagaggaagaaaaca 13409733 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 115 ttctgttagaagtatgttggtaccattcaggta 147 |||||||||||| || |||||||||||||||| Sbjct: 13409638 ttctgttagaagcttgctggtaccattcaggta 13409670
>gb|BT014041.1| Lycopersicon esculentum clone 133106F, mRNA sequence Length = 1437 Score = 159 bits (80), Expect = 1e-35 Identities = 224/272 (82%) Strand = Plus / Minus Query: 363 aggaccagcttgcgggacttgaggacagaccacctcatgcgacggtagtatgcggcttgg 422 ||||||||||| || |||||||| ||||||||||||| || | |||||| || ||||| Sbjct: 1066 aggaccagcttacgtgacttgagaacagaccacctcaaacgcctgtagtaagcagcttga 1007 Query: 423 agaagagcaagtgacagtaggaagatccatttgacacccatcagtttcctctcttccatt 482 || || ||||| ||||||| || ||||| |||| ||||||||||| |||||||||||| Sbjct: 1006 agcagtgcaagggacagtacaaatatccacttgaagcccatcagttttctctcttccatt 947 Query: 483 tcaggctcagctgcccacgacaagaacgacacgacatccttgcccatctgggcttcagtt 542 || || ||||| ||||| | || || ||||| ||||| || |||||||| ||||| ||| Sbjct: 946 tctggttcagcagcccaagttaaaaatgacaccacatctttccccatctgagcttctgtt 887 Query: 543 gcaggagtaccatcttcatactcaatagctccatccataagcatcttaggcatggctatg 602 ||||| ||||||||||||||||| ||| ||||| ||||||| || ||||| || || Sbjct: 886 gcagggacaccatcttcatactcaacagcaccatcattaagcatttttggcattgcaata 827 Query: 603 gcaccaccagggaagtagggattgtaatgcag 634 || |||||||||||||| |||||||| ||||| Sbjct: 826 gctccaccagggaagtaaggattgtagtgcag 795
>gb|AY088099.1| Arabidopsis thaliana clone 41320 mRNA, complete sequence Length = 1361 Score = 153 bits (77), Expect = 8e-34 Identities = 230/281 (81%) Strand = Plus / Minus Query: 348 tagttgacgacgtccaggaccagcttgcgggacttgaggacagaccacctcatgcgacgg 407 ||||| || ||||| || |||||||||||||||||||| || ||||| ||| || | | Sbjct: 1036 tagttaaccacgtcaagaaccagcttgcgggacttgagaaccgaccatttcagtcgcctg 977 Query: 408 tagtatgcggcttggagaagagcaagtgacagtaggaagatccatttgacacccatcagt 467 ||||| || |||||||||||||| || || |||||||| |||||||||| |||||||||| Sbjct: 976 tagtaagcagcttggagaagagcgagagagagtaggaatatccatttgaaacccatcagt 917 Query: 468 ttcctctcttccatttcaggctcagctgcccacgacaagaacgacacgacatccttgccc 527 ||||||||||||||||| || ||||||||||| | |||||| || || | ||| || ||| Sbjct: 916 ttcctctcttccatttctggttcagctgcccaggccaagaatgatacaatatctttaccc 857 Query: 528 atctgggcttcagttgcaggagtaccatcttcatactcaatagctccatccataagcatc 587 ||||| || || || || || ||||||||||||||||| |||| |||| | ||||| Sbjct: 856 atctgtgcctctgtggcggggacaccatcttcatactcaacagcttcatcattgagcatt 797 Query: 588 ttaggcatggctatggcaccaccagggaagtagggattgta 628 || ||||| || || || || |||||||| || |||||||| Sbjct: 796 ttcggcatagcaattgctcccccagggaaataaggattgta 756
>emb|X79597.1|STCYC1 S.tuberosum (Desiree) cyc1 II mRNA. for cytochrome c1 Length = 1014 Score = 151 bits (76), Expect = 3e-33 Identities = 223/272 (81%) Strand = Plus / Minus Query: 363 aggaccagcttgcgggacttgaggacagaccacctcatgcgacggtagtatgcggcttgg 422 ||||||||||| || |||||||| ||||||||||||| || | |||||| || ||||| Sbjct: 769 aggaccagcttccgtgacttgagaacagaccacctcaaacgcctgtagtaagcagcttga 710 Query: 423 agaagagcaagtgacagtaggaagatccatttgacacccatcagtttcctctcttccatt 482 || || ||||| ||||||| || ||||| |||| ||||||||||| ||||||||||| Sbjct: 709 agtagtgcaagggacagtacaaatatccacttgaagcccatcagttttctctcttccatc 650 Query: 483 tcaggctcagctgcccacgacaagaacgacacgacatccttgcccatctgggcttcagtt 542 || || ||||| ||||| | || || ||||| ||||| || |||||||| ||||| ||| Sbjct: 649 tctggttcagcagcccaagttaaaaatgacaccacatctttccccatctgagcttctgtt 590 Query: 543 gcaggagtaccatcttcatactcaatagctccatccataagcatcttaggcatggctatg 602 ||||| ||||||||||||||||| ||| ||||| ||||||| || ||||| || || Sbjct: 589 gcagggacaccatcttcatactcaacagcaccatcattaagcatttttggcattgcaata 530 Query: 603 gcaccaccagggaagtagggattgtaatgcag 634 || |||||||||||||| |||||||| ||||| Sbjct: 529 gctccaccagggaagtaaggattgtagtgcag 498
>ref|NM_113638.2| Arabidopsis thaliana electron transporter/ electron transporter, transferring electrons within CoQH2-cytochrome c reductase complex AT3G27240 mRNA, complete cds Length = 1414 Score = 145 bits (73), Expect = 2e-31 Identities = 229/281 (81%) Strand = Plus / Minus Query: 348 tagttgacgacgtccaggaccagcttgcgggacttgaggacagaccacctcatgcgacgg 407 ||||| || ||||| || |||||||||||||||||||| || ||||| | | || | | Sbjct: 1058 tagttaaccacgtcaagaaccagcttgcgggacttgagaaccgaccattttagtcgcctg 999 Query: 408 tagtatgcggcttggagaagagcaagtgacagtaggaagatccatttgacacccatcagt 467 ||||| || |||||||||||||| || || |||||||| |||||||||| |||||||||| Sbjct: 998 tagtaagcagcttggagaagagcgagagagagtaggaatatccatttgaaacccatcagt 939 Query: 468 ttcctctcttccatttcaggctcagctgcccacgacaagaacgacacgacatccttgccc 527 ||||||||||||||||| || ||||||||||| | |||||| || || | ||| || ||| Sbjct: 938 ttcctctcttccatttctggttcagctgcccaggccaagaatgatacaatatctttaccc 879 Query: 528 atctgggcttcagttgcaggagtaccatcttcatactcaatagctccatccataagcatc 587 ||||| || || || || || ||||||||||||||||| |||| |||| | ||||| Sbjct: 878 atctgtgcctctgtggcggggacaccatcttcatactcaacagcttcatcattgagcatt 819 Query: 588 ttaggcatggctatggcaccaccagggaagtagggattgta 628 || ||||| || || || || |||||||| || |||||||| Sbjct: 818 ttcggcatagcaattgctcccccagggaaataaggattgta 778
>gb|AF458338.1|AF458338 Arabidopsis thaliana AT3g27240/K17E12_6 mRNA, complete cds Length = 924 Score = 145 bits (73), Expect = 2e-31 Identities = 229/281 (81%) Strand = Plus / Minus Query: 348 tagttgacgacgtccaggaccagcttgcgggacttgaggacagaccacctcatgcgacgg 407 ||||| || ||||| || |||||||||||||||||||| || ||||| | | || | | Sbjct: 923 tagttaaccacgtcaagaaccagcttgcgggacttgagaaccgaccattttagtcgcctg 864 Query: 408 tagtatgcggcttggagaagagcaagtgacagtaggaagatccatttgacacccatcagt 467 ||||| || |||||||||||||| || || |||||||| |||||||||| |||||||||| Sbjct: 863 tagtaagcagcttggagaagagcgagagagagtaggaatatccatttgaaacccatcagt 804 Query: 468 ttcctctcttccatttcaggctcagctgcccacgacaagaacgacacgacatccttgccc 527 ||||||||||||||||| || ||||||||||| | |||||| || || | ||| || ||| Sbjct: 803 ttcctctcttccatttctggttcagctgcccaggccaagaatgatacaatatctttaccc 744 Query: 528 atctgggcttcagttgcaggagtaccatcttcatactcaatagctccatccataagcatc 587 ||||| || || || || || ||||||||||||||||| |||| |||| | ||||| Sbjct: 743 atctgtgcctctgtggcggggacaccatcttcatactcaacagcttcatcattgagcatt 684 Query: 588 ttaggcatggctatggcaccaccagggaagtagggattgta 628 || ||||| || || || || |||||||| || |||||||| Sbjct: 683 ttcggcatagcaattgctcccccagggaaataaggattgta 643
>gb|AY054246.1| Arabidopsis thaliana AT3g27240/K17E12_6 mRNA, complete cds Length = 1414 Score = 145 bits (73), Expect = 2e-31 Identities = 229/281 (81%) Strand = Plus / Minus Query: 348 tagttgacgacgtccaggaccagcttgcgggacttgaggacagaccacctcatgcgacgg 407 ||||| || ||||| || |||||||||||||||||||| || ||||| | | || | | Sbjct: 1058 tagttaaccacgtcaagaaccagcttgcgggacttgagaaccgaccattttagtcgcctg 999 Query: 408 tagtatgcggcttggagaagagcaagtgacagtaggaagatccatttgacacccatcagt 467 ||||| || |||||||||||||| || || |||||||| |||||||||| |||||||||| Sbjct: 998 tagtaagcagcttggagaagagcgagagagagtaggaatatccatttgaaacccatcagt 939 Query: 468 ttcctctcttccatttcaggctcagctgcccacgacaagaacgacacgacatccttgccc 527 ||||||||||||||||| || ||||||||||| | |||||| || || | ||| || ||| Sbjct: 938 ttcctctcttccatttctggttcagctgcccaggccaagaatgatacaatatctttaccc 879 Query: 528 atctgggcttcagttgcaggagtaccatcttcatactcaatagctccatccataagcatc 587 ||||| || || || || || ||||||||||||||||| |||| |||| | ||||| Sbjct: 878 atctgtgcctctgtggcggggacaccatcttcatactcaacagcttcatcattgagcatt 819 Query: 588 ttaggcatggctatggcaccaccagggaagtagggattgta 628 || ||||| || || || || |||||||| || |||||||| Sbjct: 818 ttcggcatagcaattgctcccccagggaaataaggattgta 778
>emb|BX824887.1|CNS0A6WM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH80ZA02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1297 Score = 145 bits (73), Expect = 2e-31 Identities = 229/281 (81%) Strand = Plus / Minus Query: 348 tagttgacgacgtccaggaccagcttgcgggacttgaggacagaccacctcatgcgacgg 407 ||||| || ||||| || |||||||||||||||||||| || ||||| | | || | | Sbjct: 1007 tagttaaccacgtcaagaaccagcttgcgggacttgagaaccgaccattttagtcgcctg 948 Query: 408 tagtatgcggcttggagaagagcaagtgacagtaggaagatccatttgacacccatcagt 467 ||||| || |||||||||||||| || || |||||||| |||||||||| |||||||||| Sbjct: 947 tagtaagcagcttggagaagagcgagagagagtaggaatatccatttgaaacccatcagt 888 Query: 468 ttcctctcttccatttcaggctcagctgcccacgacaagaacgacacgacatccttgccc 527 ||||||||||||||||| || ||||||||||| | |||||| || || | ||| || ||| Sbjct: 887 ttcctctcttccatttctggttcagctgcccaggccaagaatgatacaatatctttaccc 828 Query: 528 atctgggcttcagttgcaggagtaccatcttcatactcaatagctccatccataagcatc 587 ||||| || || || || || ||||||||||||||||| |||| |||| | ||||| Sbjct: 827 atctgtgcctctgtggcggggacaccatcttcatactcaacagcttcatcattgagcatt 768 Query: 588 ttaggcatggctatggcaccaccagggaagtagggattgta 628 || ||||| || || || || |||||||| || |||||||| Sbjct: 767 ttcggcatagcaattgctcccccagggaaataaggattgta 727
>emb|BX824618.1|CNS0A4TF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH60ZA03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1238 Score = 145 bits (73), Expect = 2e-31 Identities = 229/281 (81%) Strand = Plus / Minus Query: 348 tagttgacgacgtccaggaccagcttgcgggacttgaggacagaccacctcatgcgacgg 407 ||||| || ||||| || |||||||||||||||||||| || ||||| | | || | | Sbjct: 1006 tagttaaccacgtcaagaaccagcttgcgggacttgagaaccgaccattttagtcgcctg 947 Query: 408 tagtatgcggcttggagaagagcaagtgacagtaggaagatccatttgacacccatcagt 467 ||||| || |||||||||||||| || || |||||||| |||||||||| |||||||||| Sbjct: 946 tagtaagcagcttggagaagagcgagagagagtaggaatatccatttgaaacccatcagt 887 Query: 468 ttcctctcttccatttcaggctcagctgcccacgacaagaacgacacgacatccttgccc 527 ||||||||||||||||| || ||||||||||| | |||||| || || | ||| || ||| Sbjct: 886 ttcctctcttccatttctggttcagctgcccaggccaagaatgatacaatatctttaccc 827 Query: 528 atctgggcttcagttgcaggagtaccatcttcatactcaatagctccatccataagcatc 587 ||||| || || || || || ||||||||||||||||| |||| |||| | ||||| Sbjct: 826 atctgtgcctctgtggcggggacaccatcttcatactcaacagcttcatcattgagcatt 767 Query: 588 ttaggcatggctatggcaccaccagggaagtagggattgta 628 || ||||| || || || || |||||||| || |||||||| Sbjct: 766 ttcggcatagcaattgctcccccagggaaataaggattgta 726
>emb|BX823783.1|CNS0A6LU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS75ZC04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1366 Score = 137 bits (69), Expect = 5e-29 Identities = 228/281 (81%) Strand = Plus / Minus Query: 348 tagttgacgacgtccaggaccagcttgcgggacttgaggacagaccacctcatgcgacgg 407 ||||| || ||||| || |||||||||||||||||||| || ||||| | | || | | Sbjct: 1024 tagttaaccacgtcaagaaccagcttgcgggacttgagaaccgaccattttagtcgcctg 965 Query: 408 tagtatgcggcttggagaagagcaagtgacagtaggaagatccatttgacacccatcagt 467 ||||| || |||||||||||||| || || |||||||| |||||||||| |||||||||| Sbjct: 964 tagtaagcagcttggagaagagcgagagagagtaggaatatccatttgagacccatcagt 905 Query: 468 ttcctctcttccatttcaggctcagctgcccacgacaagaacgacacgacatccttgccc 527 ||||||||||||||||| || ||||||||||| | ||||| || || | ||| || ||| Sbjct: 904 ttcctctcttccatttctggttcagctgcccaggcgaagaatgatacaatatctttaccc 845 Query: 528 atctgggcttcagttgcaggagtaccatcttcatactcaatagctccatccataagcatc 587 ||||| || || || || || ||||||||||||||||| |||| |||| | ||||| Sbjct: 844 atctgtgcctctgtggcggggacaccatcttcatactcaacagcttcatcattgagcatt 785 Query: 588 ttaggcatggctatggcaccaccagggaagtagggattgta 628 || ||||| || || || || |||||||| || |||||||| Sbjct: 784 ttcggcatagcaattgctcccccagggaaataaggattgta 744
>emb|X62124.1|STCYC1G S.tuberosum cycl gene encoding cytochrome c1 Length = 1264 Score = 137 bits (69), Expect = 5e-29 Identities = 225/277 (81%) Strand = Plus / Minus Query: 349 agttgacgacgtccaggaccagcttgcgggacttgaggacagaccacctcatgcgacggt 408 ||||||| || || || |||| |||||| || |||||||||||||| |||| || |||| Sbjct: 1073 agttgacaacatcaagaaccaacttgcgagatttgaggacagaccatctcaaacggcggt 1014 Query: 409 agtatgcggcttggagaagagcaagtgacagtaggaagatccatttgacacccatcagtt 468 |||| || ||||||||||| || || || | | || |||||||||| ||||||||| | Sbjct: 1013 agtaagctgcttggagaagtgcgagagataaaacaaatatccatttgaaacccatcagct 954 Query: 469 tcctctcttccatttcaggctcagctgcccacgacaagaacgacacgacatccttgccca 528 | ||||||||||| || ||||| || ||||| |||||||| || || ||||| || |||| Sbjct: 953 ttctctcttccatctctggctccgcagcccaggacaagaatgagacaacatcttttccca 894 Query: 529 tctgggcttcagttgcaggagtaccatcttcatactcaatagctccatccataagcatct 588 |||| || || |||||||| | ||||| |||||||||| || ||||| ||||||| | Sbjct: 893 tctgtgcctcggttgcagggatgccatcctcatactcaacggcaccatcattaagcattt 834 Query: 589 taggcatggctatggcaccaccagggaagtagggatt 625 ||||||| ||||| || |||||||||||||| ||||| Sbjct: 833 taggcattgctatagctccaccagggaagtaaggatt 797
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 135 bits (68), Expect = 2e-28 Identities = 95/104 (91%) Strand = Plus / Minus Query: 530 ctgggcttcagttgcaggagtaccatcttcatactcaatagctccatccataagcatctt 589 ||||||||| || || ||||| |||||||||||||| | |||||||| ||||||||||| Sbjct: 41070942 ctgggcttctgtagctggagtgccatcttcatactcgactgctccatcaataagcatctt 41070883 Query: 590 aggcatggctatggcaccaccagggaagtagggattgtaatgca 633 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 41070882 gggcatggctatggcaccaccagggaagtagggattgtaatgca 41070839 Score = 67.9 bits (34), Expect = 4e-08 Identities = 85/102 (83%) Strand = Plus / Minus Query: 363 aggaccagcttgcgggacttgaggacagaccacctcatgcgacggtagtatgcggcttgg 422 |||||||||||||| |||||| ||| |||||| ||||||| ||||| ||||| ||||| Sbjct: 41071289 aggaccagcttgcgcgacttgtagacggaccacttcatgcgccggtaatatgcagcttgc 41071230 Query: 423 agaagagcaagtgacagtaggaagatccatttgacacccatc 464 ||||| || || || ||||| || |||||||| || |||||| Sbjct: 41071229 agaagtgcgagggagagtagaaaaatccatttcactcccatc 41071188 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 464 cagtttcctctcttccatttcaggctcagctgcccacgacaagaacgacacgacatcctt 523 |||||| ||||||||||| |||||||| || ||||| ||||||||||| || ||||| || Sbjct: 41071104 cagttttctctcttccatctcaggctccgccgcccatgacaagaacgagacaacatcttt 41071045 Query: 524 gcccatct 531 ||||||| Sbjct: 41071044 tcccatct 41071037 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 225 agattgtacccaaggtatgat 245 ||||||||||||||||||||| Sbjct: 13388369 agattgtacccaaggtatgat 13388389
>dbj|AP003266.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0492G09 Length = 142239 Score = 135 bits (68), Expect = 2e-28 Identities = 95/104 (91%) Strand = Plus / Minus Query: 530 ctgggcttcagttgcaggagtaccatcttcatactcaatagctccatccataagcatctt 589 ||||||||| || || ||||| |||||||||||||| | |||||||| ||||||||||| Sbjct: 107872 ctgggcttctgtagctggagtgccatcttcatactcgactgctccatcaataagcatctt 107813 Query: 590 aggcatggctatggcaccaccagggaagtagggattgtaatgca 633 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107812 gggcatggctatggcaccaccagggaagtagggattgtaatgca 107769 Score = 67.9 bits (34), Expect = 4e-08 Identities = 85/102 (83%) Strand = Plus / Minus Query: 363 aggaccagcttgcgggacttgaggacagaccacctcatgcgacggtagtatgcggcttgg 422 |||||||||||||| |||||| ||| |||||| ||||||| ||||| ||||| ||||| Sbjct: 108219 aggaccagcttgcgcgacttgtagacggaccacttcatgcgccggtaatatgcagcttgc 108160 Query: 423 agaagagcaagtgacagtaggaagatccatttgacacccatc 464 ||||| || || || ||||| || |||||||| || |||||| Sbjct: 108159 agaagtgcgagggagagtagaaaaatccatttcactcccatc 108118 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 464 cagtttcctctcttccatttcaggctcagctgcccacgacaagaacgacacgacatcctt 523 |||||| ||||||||||| |||||||| || ||||| ||||||||||| || ||||| || Sbjct: 108034 cagttttctctcttccatctcaggctccgccgcccatgacaagaacgagacaacatcttt 107975 Query: 524 gcccatct 531 ||||||| Sbjct: 107974 tcccatct 107967
>ref|NM_123446.3| Arabidopsis thaliana electron transporter/ electron transporter, transferring electrons within CoQH2-cytochrome c reductase complex AT5G40810 mRNA, complete cds Length = 1366 Score = 131 bits (66), Expect = 3e-27 Identities = 162/194 (83%) Strand = Plus / Minus Query: 435 gacagtaggaagatccatttgacacccatcagtttcctctcttccatttcaggctcagct 494 ||||||| ||| |||||||||| ||||||| ||||||||||||||| || || |||||| Sbjct: 961 gacagtaagaatatccatttgaaccccatcaatttcctctcttccatctctggttcagct 902 Query: 495 gcccacgacaagaacgacacgacatccttgcccatctgggcttcagttgcaggagtacca 554 ||||| |||||||| || || ||||| || |||||||| ||||| ||||||||||| ||| Sbjct: 901 gcccaggacaagaaggatacaacatctttacccatctgtgcttctgttgcaggagttcca 842 Query: 555 tcttcatactcaatagctccatccataagcatcttaggcatggctatggcaccaccaggg 614 |||||||| || | |||| |||| | ||||| || ||||| || || || ||||||||| Sbjct: 841 tcttcatattccacagcttcatcgttgagcatttttggcatagcgattgctccaccaggg 782 Query: 615 aagtagggattgta 628 || || |||||||| Sbjct: 781 aaataaggattgta 768
>gb|AY116937.1| Arabidopsis thaliana AT5g40810/MHK7_4 mRNA, complete cds Length = 924 Score = 131 bits (66), Expect = 3e-27 Identities = 162/194 (83%) Strand = Plus / Minus Query: 435 gacagtaggaagatccatttgacacccatcagtttcctctcttccatttcaggctcagct 494 ||||||| ||| |||||||||| ||||||| ||||||||||||||| || || |||||| Sbjct: 836 gacagtaagaatatccatttgaaccccatcaatttcctctcttccatctctggttcagct 777 Query: 495 gcccacgacaagaacgacacgacatccttgcccatctgggcttcagttgcaggagtacca 554 ||||| |||||||| || || ||||| || |||||||| ||||| ||||||||||| ||| Sbjct: 776 gcccaggacaagaaggatacaacatctttacccatctgtgcttctgttgcaggagttcca 717 Query: 555 tcttcatactcaatagctccatccataagcatcttaggcatggctatggcaccaccaggg 614 |||||||| || | |||| |||| | ||||| || ||||| || || || ||||||||| Sbjct: 716 tcttcatattccacagcttcatcgttgagcatttttggcatagcgattgctccaccaggg 657 Query: 615 aagtagggattgta 628 || || |||||||| Sbjct: 656 aaataaggattgta 643
>gb|AY050340.1| Arabidopsis thaliana AT5g40810/MHK7_4 mRNA, complete cds Length = 1238 Score = 131 bits (66), Expect = 3e-27 Identities = 162/194 (83%) Strand = Plus / Minus Query: 435 gacagtaggaagatccatttgacacccatcagtttcctctcttccatttcaggctcagct 494 ||||||| ||| |||||||||| ||||||| ||||||||||||||| || || |||||| Sbjct: 908 gacagtaagaatatccatttgaaccccatcaatttcctctcttccatctctggttcagct 849 Query: 495 gcccacgacaagaacgacacgacatccttgcccatctgggcttcagttgcaggagtacca 554 ||||| |||||||| || || ||||| || |||||||| ||||| ||||||||||| ||| Sbjct: 848 gcccaggacaagaaggatacaacatctttacccatctgtgcttctgttgcaggagttcca 789 Query: 555 tcttcatactcaatagctccatccataagcatcttaggcatggctatggcaccaccaggg 614 |||||||| || | |||| |||| | ||||| || ||||| || || || ||||||||| Sbjct: 788 tcttcatattccacagcttcatcgttgagcatttttggcatagcgattgctccaccaggg 729 Query: 615 aagtagggattgta 628 || || |||||||| Sbjct: 728 aaataaggattgta 715
>emb|BX829693.1|CNS0A056 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB2ZE01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1241 Score = 131 bits (66), Expect = 3e-27 Identities = 162/194 (83%) Strand = Plus / Minus Query: 435 gacagtaggaagatccatttgacacccatcagtttcctctcttccatttcaggctcagct 494 ||||||| ||| |||||||||| ||||||| ||||||||||||||| || || |||||| Sbjct: 961 gacagtaagaatatccatttgaaccccatcaatttcctctcttccatctctggttcagct 902 Query: 495 gcccacgacaagaacgacacgacatccttgcccatctgggcttcagttgcaggagtacca 554 ||||| |||||||| || || ||||| || |||||||| ||||| ||||||||||| ||| Sbjct: 901 gcccaggacaagaaggatacaacatctttacccatctgtgcttctgttgcaggagttcca 842 Query: 555 tcttcatactcaatagctccatccataagcatcttaggcatggctatggcaccaccaggg 614 |||||||| || | |||| |||| | ||||| || ||||| || || || ||||||||| Sbjct: 841 tcttcatattccacagcttcatcgttgagcatttttggcatagcgattgctccaccaggg 782 Query: 615 aagtagggattgta 628 || || |||||||| Sbjct: 781 aaataaggattgta 768
>gb|DQ294620.1| Arachis hypogaea cytochrome c1-like mRNA, partial sequence Length = 615 Score = 125 bits (63), Expect = 2e-25 Identities = 150/179 (83%) Strand = Plus / Minus Query: 459 cccatcagtttcctctcttccatttcaggctcagctgcccacgacaagaacgacacgaca 518 ||||||||||| ||||||||||| || || || || ||||| || ||||| ||||| ||| Sbjct: 506 cccatcagttttctctcttccatctccggttcggcagcccaagataagaatgacacaaca 447 Query: 519 tccttgcccatctgggcttcagttgcaggagtaccatcttcatactcaatagctccatcc 578 || || |||||||| | |||||| || ||||||||||| ||||| |||| ||| ||||| Sbjct: 446 tctttccccatctgagattcagtggcgggagtaccatcctcatattcaacagcaccatcg 387 Query: 579 ataagcatcttaggcatggctatggcaccaccagggaagtagggattgtaatgcagacc 637 ||||||| ||||||||||| ||||||||||||||||| || || || || |||||||| Sbjct: 386 ttaagcattttaggcatggcaatggcaccaccagggaaataagggttatagtgcagacc 328 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 351 ttgacgacgtccaggaccagcttgcgggacttgaggacagaccacctcatgcgacggtag 410 |||||||| || || ||||||||||| ||||| || ||||||||||| | |||||||||| Sbjct: 614 ttgacgacatcaagaaccagcttgcgagactttagaacagaccacctaaggcgacggtag 555 Query: 411 ta 412 || Sbjct: 554 ta 553
>emb|BX824810.1|CNS0A6Y4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH74ZE04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1267 Score = 113 bits (57), Expect = 7e-22 Identities = 181/221 (81%), Gaps = 1/221 (0%) Strand = Plus / Minus Query: 348 tagttgacgacgtccaggaccagcttgcgggacttgaggacagaccacctcatgcgacgg 407 ||||| || ||||| || |||||||||||||||||||| || ||||| | | || | | Sbjct: 982 tagttaaccacgtcaagaaccagcttgcgggacttgagaaccgaccattttagtcgcctg 923 Query: 408 tagtatgcggcttggagaagagcaagtgacagtaggaagatccatttgacaccca-tcag 466 ||||| || |||||||||||||| || | |||||||| |||||||||| ||||| |||| Sbjct: 922 tagtaagcagcttggagaagagcgagatatagtaggaatatccatttgaaacccaatcag 863 Query: 467 tttcctctcttccatttcaggctcagctgcccacgacaagaacgacacgacatccttgcc 526 |||||||||||||||||| || ||||||||||| | |||||| || || | ||| || || Sbjct: 862 tttcctctcttccatttctggttcagctgcccaggccaagaatgatacaatatctttacc 803 Query: 527 catctgggcttcagttgcaggagtaccatcttcatactcaa 567 |||||| || || || || || ||||||||||||||||| Sbjct: 802 catctgtgcctctgtggcggggacaccatcttcatactcaa 762
>gb|AC185524.1| Medicago truncatula clone mth2-62g23, complete sequence Length = 40651 Score = 111 bits (56), Expect = 3e-21 Identities = 89/100 (89%) Strand = Plus / Minus Query: 534 gcttcagttgcaggagtaccatcttcatactcaatagctccatccataagcatcttaggc 593 ||||| || ||||| |||||||||||||| |||| ||| ||||| |||||||||||||| Sbjct: 10339 gcttcggtagcaggggtaccatcttcatattcaacagcgccatcattaagcatcttaggc 10280 Query: 594 atggctatggcaccaccagggaagtagggattgtaatgca 633 ||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 10279 atggcaatggctccaccagggaagtaaggattgtaatgca 10240 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 464 cagtttcctctcttccatttcaggctcagctgcccacgacaagaacgacacgacatcctt 523 |||||| ||||||||||| ||||| || |||||||| ||||| || ||||| ||||| || Sbjct: 10522 cagttttctctcttccatctcaggttccgctgcccaagacaaaaatgacacaacatcttt 10463 Query: 524 gcccatctg 532 |||||||| Sbjct: 10462 ccccatctg 10454 Score = 46.1 bits (23), Expect = 0.14 Identities = 62/75 (82%) Strand = Plus / Minus Query: 347 ctagttgacgacgtccaggaccagcttgcgggacttgaggacagaccacctcatgcgacg 406 ||||||||| || || || |||| |||||| ||||| || |||||||||| | ||||| Sbjct: 10720 ctagttgacaacatcaagaaccaacttgcgagacttaagaacagaccaccgaagacgacg 10661 Query: 407 gtagtatgcggcttg 421 |||||||||||||| Sbjct: 10660 atagtatgcggcttg 10646
>gb|AC138464.19| Medicago truncatula clone mth2-29i23, complete sequence Length = 134105 Score = 111 bits (56), Expect = 3e-21 Identities = 89/100 (89%) Strand = Plus / Minus Query: 534 gcttcagttgcaggagtaccatcttcatactcaatagctccatccataagcatcttaggc 593 ||||| || ||||| |||||||||||||| |||| ||| ||||| |||||||||||||| Sbjct: 106731 gcttcggtagcaggggtaccatcttcatattcaacagcgccatcattaagcatcttaggc 106672 Query: 594 atggctatggcaccaccagggaagtagggattgtaatgca 633 ||||| ||||| |||||||||||||| ||||||||||||| Sbjct: 106671 atggcaatggctccaccagggaagtaaggattgtaatgca 106632 Score = 65.9 bits (33), Expect = 2e-07 Identities = 84/101 (83%) Strand = Plus / Minus Query: 534 gcttcagttgcaggagtaccatcttcatactcaatagctccatccataagcatcttaggc 593 ||||| || ||||| |||||||||||||| |||| ||| || || ||||||| |||||| Sbjct: 77944 gcttcggtagcaggggtaccatcttcatattcaacagcaccgtcattaagcattttaggc 77885 Query: 594 atggctatggcaccaccagggaagtagggattgtaatgcag 634 ||||| ||||| |||||||| || || ||||| || ||||| Sbjct: 77884 atggcaatggctccaccaggaaaataaggattatagtgcag 77844 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 464 cagtttcctctcttccatttcaggctcagctgcccacgacaagaacgacacgacatcctt 523 |||||| ||||||||||| ||||| || |||||||| ||||| || ||||| ||||| || Sbjct: 106914 cagttttctctcttccatctcaggttccgctgcccaagacaaaaatgacacaacatcttt 106855 Query: 524 gcccatctg 532 |||||||| Sbjct: 106854 ccccatctg 106846 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 464 cagtttcctctcttccatttcaggctcagctgcccacgacaagaacgacacgacatcctt 523 |||||| ||||||||||| ||||| || |||||||| ||||| || ||||| ||||| || Sbjct: 78105 cagttttctctcttccatctcaggttctgctgcccaagacaaaaatgacacaacatcttt 78046 Query: 524 gcccatctg 532 |||||||| Sbjct: 78045 ccccatctg 78037 Score = 46.1 bits (23), Expect = 0.14 Identities = 62/75 (82%) Strand = Plus / Minus Query: 347 ctagttgacgacgtccaggaccagcttgcgggacttgaggacagaccacctcatgcgacg 406 ||||||||| || || || |||| |||||| ||||| || |||||||||| | ||||| Sbjct: 107112 ctagttgacaacatcaagaaccaacttgcgagacttaagaacagaccaccgaagacgacg 107053 Query: 407 gtagtatgcggcttg 421 |||||||||||||| Sbjct: 107052 atagtatgcggcttg 107038
>dbj|AK073125.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033010L17, full insert sequence Length = 2109 Score = 111 bits (56), Expect = 3e-21 Identities = 62/64 (96%) Strand = Plus / Minus Query: 570 gctccatccataagcatcttaggcatggctatggcaccaccagggaagtagggattgtaa 629 |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 2104 gctccatcaataagcatcttgggcatggctatggcaccaccagggaagtagggattgtaa 2045 Query: 630 tgca 633 |||| Sbjct: 2044 tgca 2041
>gb|L41695.1|PS300038E Eucalyptus globulus bicostata symbiont (F00060) mRNA, ESTun038 Length = 330 Score = 93.7 bits (47), Expect = 7e-16 Identities = 152/187 (81%) Strand = Plus / Minus Query: 447 atccatttgacacccatcagtttcctctcttccatttcaggctcagctgcccacgacaag 506 |||||||||| |||||||| || || |||||||||||||| || || ||||| || ||| Sbjct: 233 atccatttgaatcccatcagctttctttcttccatttcaggttctgcagcccatgataag 174 Query: 507 aacgacacgacatccttgcccatctgggcttcagttgcaggagtaccatcttcatactca 566 || | |||||||| || |||||||| ||||| ||||| || || |||||||||||||| Sbjct: 173 aatgttacgacatctttccccatctgagcttctgttgctggggtcccatcttcatactcg 114 Query: 567 atagctccatccataagcatcttaggcatggctatggcaccaccagggaagtagggattg 626 | ||| ||||| |||||||| | ||||| || || || |||||||| || || |||||| Sbjct: 113 acagcaccatcaataagcatttgcggcattgcaattgctccaccaggaaaatatggattg 54 Query: 627 taatgca 633 || |||| Sbjct: 53 tagtgca 47
>dbj|AP000381.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K17E12 Length = 63604 Score = 73.8 bits (37), Expect = 6e-10 Identities = 97/117 (82%) Strand = Plus / Plus Query: 348 tagttgacgacgtccaggaccagcttgcgggacttgaggacagaccacctcatgcgacgg 407 ||||| || ||||| || |||||||||||||||||||| || ||||| | | || | | Sbjct: 20014 tagttaaccacgtcaagaaccagcttgcgggacttgagaaccgaccattttagtcgcctg 20073 Query: 408 tagtatgcggcttggagaagagcaagtgacagtaggaagatccatttgacacccatc 464 ||||| || |||||||||||||| || || |||||||| |||||||||| ||||||| Sbjct: 20074 tagtaagcagcttggagaagagcgagagagagtaggaatatccatttgaaacccatc 20130 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 464 cagtttcctctcttccatttcaggctcagctgcccacgacaagaa 508 ||||||||||||||||||||| || ||||||||||| | |||||| Sbjct: 20428 cagtttcctctcttccatttctggttcagctgcccaggccaagaa 20472 Score = 44.1 bits (22), Expect = 0.56 Identities = 64/78 (82%) Strand = Plus / Plus Query: 551 accatcttcatactcaatagctccatccataagcatcttaggcatggctatggcaccacc 610 ||||||||||||||||| |||| |||| | ||||| || ||||| || || || || || Sbjct: 20615 accatcttcatactcaacagcttcatcattgagcattttcggcatagcaattgctccccc 20674 Query: 611 agggaagtagggattgta 628 |||||| || |||||||| Sbjct: 20675 agggaaataaggattgta 20692
>gb|S66866.1|S66866 Solanum tuberosum cytochrome c1 precursor, gene, complete cds; mitochondrial gene for mitochondrial product Length = 6007 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Minus Query: 349 agttgacgacgtccaggaccagcttgcgggacttgaggacagaccacctcatgcgacggt 408 ||||||| || || ||||||| |||||| || |||||||||||||| |||| || |||| Sbjct: 5541 agttgacaacatcaaggaccaacttgcgagatttgaggacagaccatctcaaacggcggt 5482 Query: 409 agtatgcggcttggagaag 427 |||| || ||||||||||| Sbjct: 5481 agtaagctgcttggagaag 5463 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 552 ccatcttcatactcaatagctccatccataagcatcttaggcatggctatggcaccacca 611 ||||| |||||||||| || ||||| ||||||| |||||||| ||||| || |||||| Sbjct: 4951 ccatcctcatactcaacggcaccatcattaagcattttaggcattgctatagctccacca 4892 Query: 612 gggaagtagggatt 625 |||||||| ||||| Sbjct: 4891 gggaagtaaggatt 4878 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Minus Query: 471 ctctcttccatttcaggctcagctgcccacgacaagaacgacacgacatccttgcccat 529 ||||||||||| || |||||||| ||||| |||||||| || || ||||| || ||||| Sbjct: 5116 ctctcttccatctctggctcagcagcccatgacaagaatgagacaacatcttttcccat 5058
>dbj|AB011477.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MHK7 Length = 78181 Score = 60.0 bits (30), Expect = 9e-06 Identities = 57/66 (86%) Strand = Plus / Minus Query: 467 tttcctctcttccatttcaggctcagctgcccacgacaagaacgacacgacatccttgcc 526 ||||||||||||||| || || ||||||||||| |||||||| || || ||||| || || Sbjct: 16178 tttcctctcttccatctctggttcagctgcccaggacaagaaggatacaacatctttacc 16119 Query: 527 catctg 532 |||||| Sbjct: 16118 catctg 16113 Score = 54.0 bits (27), Expect = 6e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 534 gcttcagttgcaggagtaccatcttcatactcaatagctccatccataagcatcttaggc 593 ||||| ||||||||||| ||||||||||| || | |||| |||| | ||||| || ||| Sbjct: 15991 gcttctgttgcaggagttccatcttcatattccacagcttcatcgttgagcatttttggc 15932 Query: 594 atggctatggcaccaccagggaagtagggattgta 628 || || || || ||||||||||| || |||||||| Sbjct: 15931 atagcgattgctccaccagggaaataaggattgta 15897
>gb|AY433126.1| Aedes aegypti ASAP ID: 36451 cytochrome c1 mRNA sequence Length = 528 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 600 atggcaccaccagggaagtagggattgtaat 630 |||||||| || ||||||||||||||||||| Sbjct: 137 atggcacctcccgggaagtagggattgtaat 107
>gb|DQ440286.1| Aedes aegypti clone AET-364 mitochondrial cytochrome c1 mRNA, complete cds; nuclear gene for mitochondrial product Length = 756 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 600 atggcaccaccagggaagtagggattgtaat 630 |||||||| || ||||||||||||||||||| Sbjct: 500 atggcacctcccgggaagtagggattgtaat 470
>gb|AF245393.1|AF245393 Chlamydomonas reinhardtii cytochrome c1 mRNA, complete cds; nuclear gene for mitochondrial product Length = 1809 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Minus Query: 582 agcatcttaggcatggctatggcaccaccagggaagtagggattgta 628 |||||||| |||||||| ||||| || || ||||||||||| ||||| Sbjct: 754 agcatcttgggcatggcgatggcgccgcccgggaagtaggggttgta 708
>emb|AJ417788.2|CRE417788 Chlamydomonas reinhardtii mitochondrion cyc1 gene for cytochrome c1 Length = 6404 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Minus Query: 582 agcatcttaggcatggctatggcaccaccagggaagtagggattgta 628 |||||||| |||||||| ||||| || || ||||||||||| ||||| Sbjct: 4162 agcatcttgggcatggcgatggcgccgcccgggaagtaggggttgta 4116
>emb|AL354853.12| Human DNA sequence from clone RP11-555F9 on chromosome 9q22.1-22.33 Contains the 5' end of a novel gene and the 3' end of a novel gene, complete sequence Length = 176422 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 206 cagaggaagaaaacaaaagaga 227 |||||||||||||||||||||| Sbjct: 83078 cagaggaagaaaacaaaagaga 83099
>emb|AL844199.8| Mouse DNA sequence from clone RP23-39F22 on chromosome 4, complete sequence Length = 205589 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Minus Query: 460 ccatcagtttcctctcttccatttcaggctcagc 493 |||||||||||||| ||||||||||| |||||| Sbjct: 36911 ccatcagtttcctcatttccatttcagtctcagc 36878
>gb|AC137924.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0095K08, complete sequence Length = 180999 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 225 agattgtacccaaggtatgat 245 ||||||||||||||||||||| Sbjct: 84517 agattgtacccaaggtatgat 84537
>gb|AC123047.3| Mus musculus BAC clone RP24-378B22 from chromosome 7, complete sequence Length = 157795 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 455 gacacccatcagtttcctctc 475 ||||||||||||||||||||| Sbjct: 66539 gacacccatcagtttcctctc 66559
>emb|BX927158.14| Zebrafish DNA sequence from clone DKEY-106K1 in linkage group 5, complete sequence Length = 144909 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 233 cccaaggtatgatgggagacaacca 257 |||||||||||||||||||| |||| Sbjct: 34579 cccaaggtatgatgggagaccacca 34603
>gb|AE014823.1| Plasmodium falciparum 3D7 chromosome 14 section 8 of 13 of the complete sequence Length = 249943 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 gaggaagaaaacaaaagagat 228 ||||||||||||||||||||| Sbjct: 186971 gaggaagaaaacaaaagagat 186991
>emb|AL590503.11| Mouse DNA sequence from clone RP23-128M23 on chromosome 13, complete sequence Length = 169547 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 436 acagtaggaagatccatttga 456 ||||||||||||||||||||| Sbjct: 112378 acagtaggaagatccatttga 112358
>gb|AC021549.9| Homo sapiens chromosome 18, clone RP11-650P15, complete sequence Length = 183066 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 466 gtttcctctcttccatttcag 486 ||||||||||||||||||||| Sbjct: 103612 gtttcctctcttccatttcag 103592
>gb|CP000236.1| Ehrlichia chaffeensis str. Arkansas, complete genome Length = 1176248 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 476 ttccatttcaggctcagctgcccac 500 |||||| |||||||||||||||||| Sbjct: 522284 ttccatctcaggctcagctgcccac 522260
>gb|AC151841.5| Mus musculus BAC clone RP23-128P10 from chromosome 7, complete sequence Length = 212484 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 455 gacacccatcagtttcctctc 475 ||||||||||||||||||||| Sbjct: 15284 gacacccatcagtttcctctc 15264
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 225 agattgtacccaaggtatgat 245 ||||||||||||||||||||| Sbjct: 7913431 agattgtacccaaggtatgat 7913411
>gb|AY177663.1| Homo sapiens desmoglein 4 preproprotein (DSG4) gene, complete cds Length = 37140 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 466 gtttcctctcttccatttcag 486 ||||||||||||||||||||| Sbjct: 29280 gtttcctctcttccatttcag 29300
>dbj|AP003337.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1111_G12 Length = 112664 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 225 agattgtacccaaggtatgat 245 ||||||||||||||||||||| Sbjct: 32922 agattgtacccaaggtatgat 32942
>dbj|AP003331.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1088D01 Length = 146144 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 225 agattgtacccaaggtatgat 245 ||||||||||||||||||||| Sbjct: 128727 agattgtacccaaggtatgat 128747
>dbj|AP003499.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-178H8, complete sequence Length = 193227 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 323 aatagaaagaagaaacaatgg 343 ||||||||||||||||||||| Sbjct: 31107 aatagaaagaagaaacaatgg 31087
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 225 agattgtacccaaggtatgat 245 ||||||||||||||||||||| Sbjct: 7983518 agattgtacccaaggtatgat 7983498
>emb|AL773525.5| Mouse DNA sequence from clone RP23-169L4 on chromosome 2, complete sequence Length = 188772 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 468 ttcctctcttccatttcaggctcag 492 ||||||||| ||||||||||||||| Sbjct: 154671 ttcctctctcccatttcaggctcag 154647
>gb|AY439902.1| Armigeres subalbatus ASAP ID: 38945 cytochrome C1 mRNA sequence Length = 1114 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 603 gcaccaccagggaagtagggattgtaat 630 ||||| || ||||||||||||||||||| Sbjct: 727 gcacctcctgggaagtagggattgtaat 700
>gb|AE017197.1| Rickettsia typhi str. Wilmington complete genome Length = 1111496 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 476 ttccatttcaggctcagctgccca 499 ||||||||| |||||||||||||| Sbjct: 332080 ttccatttccggctcagctgccca 332057
>gb|AC137511.3| Mus musculus BAC clone RP24-313I8 from chromosome 5, complete sequence Length = 168197 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 457 cacccatcagtttcctctcttcca 480 |||| ||||||||||||||||||| Sbjct: 123541 caccgatcagtttcctctcttcca 123518
>gb|AC119158.10| Mus musculus chromosome 19, clone RP23-434C14, complete sequence Length = 209459 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 204 agcagaggaagaaaacaaaagaga 227 |||||||||||||||| ||||||| Sbjct: 187590 agcagaggaagaaaactaaagaga 187567
>gb|CP000053.1| Rickettsia felis URRWXCal2, complete genome Length = 1485148 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 476 ttccatttcaggctcagctgccca 499 ||||||||| |||||||||||||| Sbjct: 1068514 ttccatttctggctcagctgccca 1068537
>emb|AL365444.11| Human DNA sequence from clone RP11-115P16 on chromosome 1 Contains the 3' UTR of a novel gene (DKFZp761P211), the ITPKB gene for inositol 1,4,5-trisphosphate 3-kinase B, two novel genes, a ribosomal protein S27 (metallopanstimulin 1) (RPS27) pseudogene and a CpG island, complete sequence Length = 181144 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 376 gggacttgaggacagaccac 395 |||||||||||||||||||| Sbjct: 144667 gggacttgaggacagaccac 144686
>emb|AL133475.14| Human DNA sequence from clone RP3-357D13 on chromosome 6 Contains the 5' end of the ELOVL4 gene for elongation of very long chain fatty acids (FEN1/ELo2, SUR4/ELo3, yeast)-like 4, a GAPD (glyceraldehyde-3-phosphate dehydrogenase) pseudogene, an RPL35A (60S ribosomal protein L35A) pseudogene, the TTK gene for TTK protein kinase and a putative CpG island, complete sequence Length = 119318 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 cagagtagcaaaatatacaa 275 |||||||||||||||||||| Sbjct: 52499 cagagtagcaaaatatacaa 52518
>ref|XM_961529.1| PREDICTED: Tribolium castaneum similar to CG9924-PC, isoform C (LOC655033), mRNA Length = 1563 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 gtttcctctcttccatttca 485 |||||||||||||||||||| Sbjct: 937 gtttcctctcttccatttca 918
>gb|AC145218.29| Medicago truncatula clone mth2-34l18, complete sequence Length = 134519 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 tgttgcaatagaaagaagaa 336 |||||||||||||||||||| Sbjct: 18079 tgttgcaatagaaagaagaa 18098
>gb|AC109821.5| Homo sapiens BAC clone RP11-509D19 from 4, complete sequence Length = 106123 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 atgatgggagacaaccagag 260 |||||||||||||||||||| Sbjct: 20728 atgatgggagacaaccagag 20747
>gb|AC095053.3| Homo sapiens BAC clone RP11-352E8 from 4, complete sequence Length = 112123 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 catctgggcttcagttgcag 546 |||||||||||||||||||| Sbjct: 20710 catctgggcttcagttgcag 20691
>gb|CP000235.1| Anaplasma phagocytophilum HZ, complete genome Length = 1471282 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 477 tccatttcaggctcagctgcccac 500 ||||||||||||||||| |||||| Sbjct: 416165 tccatttcaggctcagcagcccac 416142
>gb|AC008147.31| Homo sapiens 12 BAC RP3-405J10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 115345 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 aaagaagaaacaatggtcac 347 |||||||||||||||||||| Sbjct: 43432 aaagaagaaacaatggtcac 43413
>gb|AC105915.5| Homo sapiens BAC clone RP11-69D13 from 4, complete sequence Length = 178734 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 gctgagttccacaatataaa 91 |||||||||||||||||||| Sbjct: 145245 gctgagttccacaatataaa 145264
>dbj|AK024933.1| Homo sapiens cDNA: FLJ21280 fis, clone COL01884 Length = 2604 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 aaagaagaaacaatggtcac 347 |||||||||||||||||||| Sbjct: 2178 aaagaagaaacaatggtcac 2197
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 329 aagaagaaacaatggtcact 348 |||||||||||||||||||| Sbjct: 3750940 aagaagaaacaatggtcact 3750921
>emb|AL133168.6|CNS01DU7 Human chromosome 14 DNA sequence BAC R-187K17 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 195115 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 cagaggaagaaaacaaaaga 225 |||||||||||||||||||| Sbjct: 52201 cagaggaagaaaacaaaaga 52220
>emb|AL669851.8| Mouse DNA sequence from clone RP23-18K13 on chromosome X, complete sequence Length = 204557 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 agaggaagaaaacaaaagag 226 |||||||||||||||||||| Sbjct: 22475 agaggaagaaaacaaaagag 22494 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,290,755 Number of Sequences: 3902068 Number of extensions: 6290755 Number of successful extensions: 134285 Number of sequences better than 10.0: 74 Number of HSP's better than 10.0 without gapping: 75 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 133881 Number of HSP's gapped (non-prelim): 394 length of query: 637 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 614 effective length of database: 17,143,297,704 effective search space: 10525984790256 effective search space used: 10525984790256 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
