>RAG2_MOUSE (P21784) V(D)J recombination-activating protein 2 (RAG-2)|
          Length = 527

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 22/92 (23%), Positives = 50/92 (54%), Gaps = 11/92 (11%)
 Frame = +1

Query: 10  SGSYSGEVSRDHLQCRYN*VYTK--CWNWSVRGPSWCH---SLNSSIH------GSADMH 156
           +G +  ++ ++HL+ +   +++K  C+   +R P+ C    S++S  H      G    +
Sbjct: 43  TGVFHFDIKQNHLKLKPA-IFSKDSCYLPPLRYPATCSYKGSIDSDKHQYIIHGGKTPNN 101

Query: 157 DYNKKIVVMSISCRNHLEVPFQHHILGQVGEI 252
           + + KI +MS++C+N+ +V F+      VG++
Sbjct: 102 ELSDKIYIMSVACKNNKKVTFRCTEKDLVGDV 133

>FTSZ_MYCPU (Q50318) Cell division protein ftsZ|
          Length = 390

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = -1

Query: 371 MATIARRLRACWIQIMSVPIRFSGWLSRLQKSKGLRLTRAIS 246
           +A IAR L A  I I++ P  F G L      +G++  RA+S
Sbjct: 115 IAKIARELGALTISIVTTPFEFEGNLRNKNAQEGIKNLRAVS 156

>RAG2_RABIT (P34089) V(D)J recombination-activating protein 2 (RAG-2)|
          Length = 527

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 14/94 (14%)
 Frame = +1

Query: 10  SGSYSGEVSRDHLQCRYN*VYTK--CWNWSVRGPSWCHSLNSS--------IHGS-ADMH 156
           +G +  ++ ++HL+ +   V++K  C+   +R P+ C    SS        IHG     +
Sbjct: 43  TGVFHFDIKQNHLKLKPA-VFSKDSCYLPPLRYPATCTFQGSSESEKQQYIIHGGKTPNN 101

Query: 157 DYNKKIVVMSISCRNHLEVPF---QHHILGQVGE 249
           + + KI VMS+ C+N+ +V F   +  ++G V E
Sbjct: 102 ELSDKIYVMSVVCKNNKKVTFRCTERDLVGDVPE 135

>RAG2_HUMAN (P55895) V(D)J recombination-activating protein 2 (RAG-2)|
          Length = 527

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 11/92 (11%)
 Frame = +1

Query: 10  SGSYSGEVSRDHLQCRYN*VYTK--CWNWSVRGPSWCH---SLNSSIH------GSADMH 156
           +G +  +V  +H++ +   +++K  C+   +R P+ C    SL S  H      G    +
Sbjct: 43  TGVFHLDVKHNHVKLKPT-IFSKDSCYLPPLRYPATCTFKGSLESEKHQYIIHGGKTPNN 101

Query: 157 DYNKKIVVMSISCRNHLEVPFQHHILGQVGEI 252
           + + KI VMSI C+N+ +V F+      VG++
Sbjct: 102 EVSDKIYVMSIVCKNNKKVTFRCTEKDLVGDV 133

>LEUD_BACAN (Q81T65) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)|
           (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI)
          Length = 193

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 19/42 (45%), Positives = 20/42 (47%)
 Frame = +3

Query: 513 WRLFRERHELAQHPALPVEYGGAPGLPTGRPCGLAGSSRAHA 638
           WR   ERHE    P    +  GA  L TG   G  GSSR HA
Sbjct: 46  WRYDNERHENPNFPLNAPDRKGASILITGNNFG-CGSSREHA 86


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,494,179
Number of Sequences: 219361
Number of extensions: 2263764
Number of successful extensions: 7345
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7334
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6143359464
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)