ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd16m20 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Plus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 117292 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 117351 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 117352 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 117411 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 117412 ggggtagtacaggaatattgacctgt 117437
>gb|AY694134.1| Pennisetum glaucum clone PGP005 23S ribosomal RNA gene, partial sequence; chloroplast Length = 654 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Plus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 23 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 82 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 83 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 142 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 143 ggggtagtacaggaatattgacctgt 168
>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete sequence Length = 138345 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Plus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 20399 ctcggctcgaggcattttttctaccccttcttaccctgaaaaagcagggtcaccttgtgt 20458 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 20459 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 20518 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 20519 ggggtagtacaggaatattgacctgt 20544
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Plus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 118376 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 118435 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 118436 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 118495 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 118496 ggggtagtacaggaatattgacctgt 118521 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Minus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 96780 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 96721 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 96720 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 96661 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 96660 ggggtagtacaggaatattgacctgt 96635
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Plus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 118376 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 118435 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 118436 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 118495 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 118496 ggggtagtacaggaatattgacctgt 118521 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Minus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 96780 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 96721 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 96720 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 96661 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 96660 ggggtagtacaggaatattgacctgt 96635
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Plus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 118325 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 118384 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 118385 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 118444 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 118445 ggggtagtacaggaatattgacctgt 118470 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Minus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 96725 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 96666 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 96665 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 96606 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 96605 ggggtagtacaggaatattgacctgt 96580
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Minus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 31509358 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 31509299 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 31509298 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 31509239 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 31509238 ggggtagtacaggaatattgacctgt 31509213 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Plus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 27320192 ctcggctcgaggcattttttctaccccttcttaccctgaaaaagcagggtcaccttgtgt 27320251 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 27320252 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 27320311 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 27320312 ggggtagtacaggaatattgacctgt 27320337
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Plus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 83238 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 83297 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 83298 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 83357 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 83358 ggggtagtacaggaatattgacctgt 83383
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Plus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 122117 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 122176 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 122177 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 122236 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 122237 ggggtagtacaggaatattgacctgt 122262 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Minus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 100620 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 100561 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 100560 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 100501 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 100500 ggggtagtacaggaatattgacctgt 100475
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Plus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 118345 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 118404 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 118405 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 118464 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 118465 ggggtagtacaggaatattgacctgt 118490 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Minus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 96773 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 96714 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 96713 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 96654 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 96653 ggggtagtacaggaatattgacctgt 96628
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Minus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 123821 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 123762 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 123761 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 123702 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 123701 ggggtagtacaggaatattgacctgt 123676 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Minus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 15547 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 15488 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 15487 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 15428 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 15427 ggggtagtacaggaatattgacctgt 15402
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Minus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 142355 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 142296 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 142295 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 142236 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 142235 ggggtagtacaggaatattgacctgt 142210
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Minus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 94951 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 94892 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 94891 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 94832 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 94831 ggggtagtacaggaatattgacctgt 94806
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Plus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 43335 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 43394 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 43395 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 43454 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 43455 ggggtagtacaggaatattgacctgt 43480 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Minus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 21782 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 21723 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 21722 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 21663 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 21662 ggggtagtacaggaatattgacctgt 21637
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Plus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 57064 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 57123 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 57124 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 57183 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 57184 ggggtagtacaggaatattgacctgt 57209
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Minus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 29015 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 28956 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 28955 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 28896 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 28895 ggggtagtacaggaatattgacctgt 28870
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Minus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 9269707 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 9269648 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 9269647 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 9269588 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 9269587 ggggtagtacaggaatattgacctgt 9269562 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Minus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 9229207 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 9229148 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 9229147 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 9229088 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 9229087 ggggtagtacaggaatattgacctgt 9229062 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Minus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 9165795 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 9165736 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 9165735 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 9165676 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 9165675 ggggtagtacaggaatattgacctgt 9165650 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Minus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 9057621 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 9057562 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 9057561 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 9057502 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 9057501 ggggtagtacaggaatattgacctgt 9057476 Score = 58.0 bits (29), Expect = 8e-06 Identities = 45/52 (86%) Strand = Plus / Minus Query: 66 aacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaa 117 ||||||||||||| ||| || |||||||||||| ||||||| || | ||||| Sbjct: 5792222 aacctataaccatcttttggctaacctagcctcctccgtccctccgtaccaa 5792171
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Plus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 5634258 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgcgt 5634317 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 5634318 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 5634377 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 5634378 ggggtagtacaggaatattgacctgt 5634403 Score = 54.0 bits (27), Expect = 1e-04 Identities = 51/61 (83%) Strand = Plus / Plus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| |||| || |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 13417129 ctcggctcgatgcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 13417188 Query: 61 c 61 | Sbjct: 13417189 c 13417189
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Minus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 19939692 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 19939633 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 19939632 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 19939573 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 19939572 ggggtagtacaggaatattgacctgt 19939547 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Minus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 10388559 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 10388500 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 10388499 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 10388440 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 10388439 ggggtagtacaggaatattgacctgt 10388414 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Plus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 10275739 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 10275798 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 10275799 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 10275858 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 10275859 ggggtagtacaggaatattgacctgt 10275884
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Plus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 9240574 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 9240633 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 9240634 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 9240693 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 9240694 ggggtagtacaggaatattgacctgt 9240719 Score = 52.0 bits (26), Expect = 5e-04 Identities = 35/39 (89%) Strand = Plus / Plus Query: 31 ttaccntgaaaaagcagggtnaccttgngtccttaaacc 69 ||||| |||||||| ||||| |||||| ||||||||||| Sbjct: 3579838 ttaccctgaaaaaggagggtcaccttgtgtccttaaacc 3579876
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Minus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 31599874 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 31599815 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 31599814 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 31599755 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 31599754 ggggtagtacaggaatattgacctgt 31599729 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Plus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 27411515 ctcggctcgaggcattttttctaccccttcttaccctgaaaaagcagggtcaccttgtgt 27411574 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 27411575 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 27411634 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 27411635 ggggtagtacaggaatattgacctgt 27411660
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Plus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 46351 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 46410 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 46411 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 46470 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 46471 ggggtagtacaggaatattgacctgt 46496
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Plus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 122175 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 122234 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 122235 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 122294 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 122295 ggggtagtacaggaatattgacctgt 122320 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Minus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 100662 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 100603 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 100602 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 100543 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 100542 ggggtagtacaggaatattgacctgt 100517
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Plus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 51787 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 51846 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 51847 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 51906 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 51907 ggggtagtacaggaatattgacctgt 51932
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Minus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 6973 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 6914 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 6913 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 6854 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 6853 ggggtagtacaggaatattgacctgt 6828
>dbj|AK119524.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E06, full insert sequence Length = 1809 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Minus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 213 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 154 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 153 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 94 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 93 ggggtagtacaggaatattgacctgt 68
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Minus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 1159 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 1100 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 1099 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 1040 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 1039 ggggtagtacaggaatattgacctgt 1014
>dbj|AK105825.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-E01, full insert sequence Length = 1345 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Minus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 433 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 374 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 373 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 314 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 313 ggggtagtacaggaatattgacctgt 288
>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full insert sequence Length = 2146 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Minus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 629 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 570 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 569 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 510 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 509 ggggtagtacaggaatattgacctgt 484
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Minus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 1354 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 1295 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 1294 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 1235 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 1234 ggggtagtacaggaatattgacctgt 1209
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Minus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 1225 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 1166 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 1165 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 1106 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 1105 ggggtagtacaggaatattgacctgt 1080
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Minus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 1354 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 1295 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 1294 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 1235 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 1234 ggggtagtacaggaatattgacctgt 1209
>dbj|AK058658.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-F10, full insert sequence Length = 1383 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Minus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 442 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 383 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 382 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 323 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 322 ggggtagtacaggaatattgacctgt 297
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Minus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 977 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 918 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 917 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 858 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 857 ggggtagtacaggaatattgacctgt 832
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Minus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 19950968 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 19950909 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 19950908 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 19950849 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 19950848 ggggtagtacaggaatattgacctgt 19950823 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Minus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 10394598 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 10394539 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 10394538 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 10394479 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 10394478 ggggtagtacaggaatattgacctgt 10394453 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Plus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 10281778 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 10281837 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 10281838 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 10281897 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 10281898 ggggtagtacaggaatattgacctgt 10281923
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Plus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 5634247 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgcgt 5634306 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 5634307 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 5634366 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 5634367 ggggtagtacaggaatattgacctgt 5634392 Score = 54.0 bits (27), Expect = 1e-04 Identities = 51/61 (83%) Strand = Plus / Plus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| |||| || |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 13371403 ctcggctcgatgcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 13371462 Query: 61 c 61 | Sbjct: 13371463 c 13371463
>emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa0021D06 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 139684 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Minus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 18627 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgcgt 18568 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 18567 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 18508 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 18507 ggggtagtacaggaatattgacctgt 18482
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Plus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 122892 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 122951 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 122952 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 123011 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 123012 ggggtagtacaggaatattgacctgt 123037 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Minus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 101339 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 101280 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 101279 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 101220 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 101219 ggggtagtacaggaatattgacctgt 101194
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Plus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 118319 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 118378 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 118379 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 118438 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 118439 ggggtagtacaggaatattgacctgt 118464 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Minus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 96720 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 96661 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 96660 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 96601 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 96600 ggggtagtacaggaatattgacctgt 96575
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Plus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 118511 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 118570 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 118571 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 118630 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 118631 ggggtagtacaggaatattgacctgt 118656 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Minus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 96383 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 96324 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 96323 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 96264 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 96263 ggggtagtacaggaatattgacctgt 96238
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 167 bits (84), Expect = 1e-38 Identities = 127/146 (86%) Strand = Plus / Minus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 1561 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 1502 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 1501 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 1442 Query: 121 ggggtagtncaggaatatngacctgt 146 |||||||| ||||||||| ||||||| Sbjct: 1441 ggggtagtacaggaatattgacctgt 1416
>dbj|AK105692.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C06, full insert sequence Length = 2509 Score = 161 bits (81), Expect = 7e-37 Identities = 124/143 (86%) Strand = Plus / Minus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 498 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 439 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||||||||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 438 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 379 Query: 121 ggggtagtncaggaatatngacc 143 |||||||| ||||||||| |||| Sbjct: 378 ggggtagtacaggaatattgacc 356
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 143 bits (72), Expect = 2e-31 Identities = 98/110 (89%) Strand = Plus / Plus Query: 37 tgaaaaagcagggtnaccttgngtccttaaacctataaccatttttnggttaacctagcc 96 |||||||||||||| |||||| |||||||||||||||||||| ||| || |||||||||| Sbjct: 1 tgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcc 60 Query: 97 tcntccgtccntcngnaccaacanggggtagtncaggaatatngacctgt 146 || ||||||| || | ||||||| |||||||| ||||||||| ||||||| Sbjct: 61 tcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgt 110
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 139 bits (70), Expect = 3e-30 Identities = 119/140 (85%) Strand = Plus / Plus Query: 7 tcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaa 66 ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| |||||| | Sbjct: 138813 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgcgtccttga 138872 Query: 67 acctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggta 126 ||| |||||||| ||| || |||||||||||| ||||||| || | ||||||| |||||| Sbjct: 138873 accgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggta 138932 Query: 127 gtncaggaatatngacctgt 146 || ||||||||| |||||| Sbjct: 138933 gtacaggaatattcacctgt 138952 Score = 139 bits (70), Expect = 3e-30 Identities = 119/140 (85%) Strand = Plus / Minus Query: 7 tcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaa 66 ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| |||||| | Sbjct: 111247 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgcgtccttga 111188 Query: 67 acctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggta 126 ||| |||||||| ||| || |||||||||||| ||||||| || | ||||||| |||||| Sbjct: 111187 accgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggta 111128 Query: 127 gtncaggaatatngacctgt 146 || ||||||||| |||||| Sbjct: 111127 gtacaggaatattcacctgt 111108
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 131 bits (66), Expect = 6e-28 Identities = 118/140 (84%) Strand = Plus / Plus Query: 7 tcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaa 66 ||||||| |||| | ||||| || ||||| |||||||||||||| ||||| |||||| | Sbjct: 131230 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttacgtccttga 131289 Query: 67 acctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggta 126 ||| |||||||| ||| || |||||||||||| ||||||| || | ||||||| |||||| Sbjct: 131290 accgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggta 131349 Query: 127 gtncaggaatatngacctgt 146 || ||||||||| |||||| Sbjct: 131350 gtacaggaatattcacctgt 131369 Score = 131 bits (66), Expect = 6e-28 Identities = 118/140 (84%) Strand = Plus / Minus Query: 7 tcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaa 66 ||||||| |||| | ||||| || ||||| |||||||||||||| ||||| |||||| | Sbjct: 105648 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttacgtccttga 105589 Query: 67 acctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggta 126 ||| |||||||| ||| || |||||||||||| ||||||| || | ||||||| |||||| Sbjct: 105588 accgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggta 105529 Query: 127 gtncaggaatatngacctgt 146 || ||||||||| |||||| Sbjct: 105528 gtacaggaatattcacctgt 105509
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 131 bits (66), Expect = 6e-28 Identities = 118/140 (84%) Strand = Plus / Plus Query: 7 tcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaa 66 ||||||| |||| | ||||| || ||||| |||||||||||||| ||||| |||||| | Sbjct: 130122 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttacgtccttga 130181 Query: 67 acctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggta 126 ||| |||||||| ||| || |||||||||||| ||||||| || | ||||||| |||||| Sbjct: 130182 accgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggta 130241 Query: 127 gtncaggaatatngacctgt 146 || ||||||||| |||||| Sbjct: 130242 gtacaggaatattcacctgt 130261 Score = 131 bits (66), Expect = 6e-28 Identities = 118/140 (84%) Strand = Plus / Minus Query: 7 tcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaa 66 ||||||| |||| | ||||| || ||||| |||||||||||||| ||||| |||||| | Sbjct: 104513 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttacgtccttga 104454 Query: 67 acctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggta 126 ||| |||||||| ||| || |||||||||||| ||||||| || | ||||||| |||||| Sbjct: 104453 accgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggta 104394 Query: 127 gtncaggaatatngacctgt 146 || ||||||||| |||||| Sbjct: 104393 gtacaggaatattcacctgt 104374
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 131 bits (66), Expect = 6e-28 Identities = 118/140 (84%) Strand = Plus / Plus Query: 7 tcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaa 66 ||||||| |||| | ||||| || ||||| |||||||||||||| ||||| |||||| | Sbjct: 135047 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttacgtccttga 135106 Query: 67 acctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggta 126 ||| |||||||| ||| || |||||||||||| ||||||| || | ||||||| |||||| Sbjct: 135107 accgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggta 135166 Query: 127 gtncaggaatatngacctgt 146 || ||||||||| |||||| Sbjct: 135167 gtacaggaatattcacctgt 135186 Score = 131 bits (66), Expect = 6e-28 Identities = 118/140 (84%) Strand = Plus / Minus Query: 7 tcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaa 66 ||||||| |||| | ||||| || ||||| |||||||||||||| ||||| |||||| | Sbjct: 107378 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttacgtccttga 107319 Query: 67 acctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggta 126 ||| |||||||| ||| || |||||||||||| ||||||| || | ||||||| |||||| Sbjct: 107318 accgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggta 107259 Query: 127 gtncaggaatatngacctgt 146 || ||||||||| |||||| Sbjct: 107258 gtacaggaatattcacctgt 107239
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 131 bits (66), Expect = 6e-28 Identities = 118/140 (84%) Strand = Plus / Plus Query: 7 tcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaa 66 ||||||| |||| | ||||| || ||||| |||||||||||||| ||||| |||||| | Sbjct: 131223 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttacgtccttga 131282 Query: 67 acctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggta 126 ||| |||||||| ||| || |||||||||||| ||||||| || | ||||||| |||||| Sbjct: 131283 accgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggta 131342 Query: 127 gtncaggaatatngacctgt 146 || ||||||||| |||||| Sbjct: 131343 gtacaggaatattcacctgt 131362 Score = 131 bits (66), Expect = 6e-28 Identities = 118/140 (84%) Strand = Plus / Minus Query: 7 tcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaa 66 ||||||| |||| | ||||| || ||||| |||||||||||||| ||||| |||||| | Sbjct: 105646 tcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttacgtccttga 105587 Query: 67 acctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggta 126 ||| |||||||| ||| || |||||||||||| ||||||| || | ||||||| |||||| Sbjct: 105586 accgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggta 105527 Query: 127 gtncaggaatatngacctgt 146 || ||||||||| |||||| Sbjct: 105526 gtacaggaatattcacctgt 105507
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 123 bits (62), Expect = 2e-25 Identities = 114/136 (83%) Strand = Plus / Plus Query: 11 ggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaaacct 70 ||| |||| | ||||| || ||||| ||||||||||||| |||||| |||||| |||| Sbjct: 137963 ggcattttctctaccccttcttaccctgaaaaagcaggggcaccttgcgtccttgaaccg 138022 Query: 71 ataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggtagtnc 130 |||||||| ||| || |||||||||||| ||||||| || | ||||||| |||||||| | Sbjct: 138023 ataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggtagtac 138082 Query: 131 aggaatatngacctgt 146 |||||||| |||||| Sbjct: 138083 aggaatattcacctgt 138098 Score = 123 bits (62), Expect = 2e-25 Identities = 114/136 (83%) Strand = Plus / Minus Query: 11 ggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaaacct 70 ||| |||| | ||||| || ||||| ||||||||||||| |||||| |||||| |||| Sbjct: 111134 ggcattttctctaccccttcttaccctgaaaaagcaggggcaccttgcgtccttgaaccg 111075 Query: 71 ataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggtagtnc 130 |||||||| ||| || |||||||||||| ||||||| || | ||||||| |||||||| | Sbjct: 111074 ataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggtagtac 111015 Query: 131 aggaatatngacctgt 146 |||||||| |||||| Sbjct: 111014 aggaatattcacctgt 110999
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 123 bits (62), Expect = 2e-25 Identities = 118/140 (84%), Gaps = 1/140 (0%) Strand = Plus / Plus Query: 7 tcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaa 66 ||||||| |||| | ||||| || ||||| ||||||| |||||| |||||| |||||| | Sbjct: 130247 tcgaggcattttctctaccccttcttaccctgaaaaa-cagggtcaccttgcgtccttga 130305 Query: 67 acctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggta 126 ||| |||||||| ||| || |||||||||||| ||||||| || | ||||||| |||||| Sbjct: 130306 accgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggta 130365 Query: 127 gtncaggaatatngacctgt 146 || ||||||||| |||||| Sbjct: 130366 gtacaggaatattcacctgt 130385 Score = 123 bits (62), Expect = 2e-25 Identities = 118/140 (84%), Gaps = 1/140 (0%) Strand = Plus / Minus Query: 7 tcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaa 66 ||||||| |||| | ||||| || ||||| ||||||| |||||| |||||| |||||| | Sbjct: 103198 tcgaggcattttctctaccccttcttaccctgaaaaa-cagggtcaccttgcgtccttga 103140 Query: 67 acctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggta 126 ||| |||||||| ||| || |||||||||||| ||||||| || | ||||||| |||||| Sbjct: 103139 accgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggta 103080 Query: 127 gtncaggaatatngacctgt 146 || ||||||||| |||||| Sbjct: 103079 gtacaggaatattcacctgt 103060
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 123 bits (62), Expect = 2e-25 Identities = 117/140 (83%) Strand = Plus / Plus Query: 7 tcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaa 66 ||||||| ||| | ||||| || ||||| |||||||||| ||| |||||| |||||| | Sbjct: 126322 tcgaggcatttcctctaccccttcttaccctgaaaaagcaaggtcaccttgcgtccttga 126381 Query: 67 acctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggta 126 ||| |||||||| ||| || |||||||||||| ||||||| || | ||||||| |||||| Sbjct: 126382 accgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggta 126441 Query: 127 gtncaggaatatngacctgt 146 || ||||||||| |||||| Sbjct: 126442 gtacaggaatattcacctgt 126461 Score = 123 bits (62), Expect = 2e-25 Identities = 117/140 (83%) Strand = Plus / Minus Query: 7 tcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaa 66 ||||||| ||| | ||||| || ||||| |||||||||| ||| |||||| |||||| | Sbjct: 108600 tcgaggcatttcctctaccccttcttaccctgaaaaagcaaggtcaccttgcgtccttga 108541 Query: 67 acctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggta 126 ||| |||||||| ||| || |||||||||||| ||||||| || | ||||||| |||||| Sbjct: 108540 accgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggta 108481 Query: 127 gtncaggaatatngacctgt 146 || ||||||||| |||||| Sbjct: 108480 gtacaggaatattcacctgt 108461
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 123 bits (62), Expect = 2e-25 Identities = 117/140 (83%) Strand = Plus / Plus Query: 7 tcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaa 66 ||||||| |||| | ||||| || ||||| ||||||||||||| |||||| |||||| | Sbjct: 130322 tcgaggcattttctctaccccttattaccctgaaaaagcaggggcaccttgcgtccttga 130381 Query: 67 acctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggta 126 ||| |||||||| ||| || |||||||||||| ||||||| || | ||||||| ||||| Sbjct: 130382 accgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaagggta 130441 Query: 127 gtncaggaatatngacctgt 146 || ||||||||| |||||| Sbjct: 130442 gtacaggaatattcacctgt 130461 Score = 123 bits (62), Expect = 2e-25 Identities = 117/140 (83%) Strand = Plus / Minus Query: 7 tcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaa 66 ||||||| |||| | ||||| || ||||| ||||||||||||| |||||| |||||| | Sbjct: 105072 tcgaggcattttctctaccccttattaccctgaaaaagcaggggcaccttgcgtccttga 105013 Query: 67 acctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggta 126 ||| |||||||| ||| || |||||||||||| ||||||| || | ||||||| ||||| Sbjct: 105012 accgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaagggta 104953 Query: 127 gtncaggaatatngacctgt 146 || ||||||||| |||||| Sbjct: 104952 gtacaggaatattcacctgt 104933
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 123 bits (62), Expect = 2e-25 Identities = 117/140 (83%) Strand = Plus / Plus Query: 7 tcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaa 66 ||||||| ||| | ||||| || ||||| |||||||||||||| ||||| |||||| | Sbjct: 132678 tcgaggcatttcctctaccccttcttaccctgaaaaagcagggtcaccttacgtccttga 132737 Query: 67 acctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggta 126 ||| |||||||| ||| || |||||||||||| ||||||| || | ||||||| |||||| Sbjct: 132738 accgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggta 132797 Query: 127 gtncaggaatatngacctgt 146 || ||||||||| |||||| Sbjct: 132798 gtacaggaatattcacctgt 132817 Score = 123 bits (62), Expect = 2e-25 Identities = 117/140 (83%) Strand = Plus / Minus Query: 7 tcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaa 66 ||||||| ||| | ||||| || ||||| |||||||||||||| ||||| |||||| | Sbjct: 105293 tcgaggcatttcctctaccccttcttaccctgaaaaagcagggtcaccttacgtccttga 105234 Query: 67 acctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggta 126 ||| |||||||| ||| || |||||||||||| ||||||| || | ||||||| |||||| Sbjct: 105233 accgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggta 105174 Query: 127 gtncaggaatatngacctgt 146 || ||||||||| |||||| Sbjct: 105173 gtacaggaatattcacctgt 105154
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 123 bits (62), Expect = 2e-25 Identities = 114/136 (83%) Strand = Plus / Plus Query: 11 ggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaaacct 70 ||| |||| | ||||| || ||||| ||||||||||||| |||||| |||||| |||| Sbjct: 138168 ggcattttctctaccccttcttaccctgaaaaagcaggggcaccttgcgtccttgaaccg 138227 Query: 71 ataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggtagtnc 130 |||||||| ||| || |||||||||||| ||||||| || | ||||||| |||||||| | Sbjct: 138228 ataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggtagtac 138287 Query: 131 aggaatatngacctgt 146 |||||||| |||||| Sbjct: 138288 aggaatattcacctgt 138303 Score = 123 bits (62), Expect = 2e-25 Identities = 114/136 (83%) Strand = Plus / Minus Query: 11 ggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaaacct 70 ||| |||| | ||||| || ||||| ||||||||||||| |||||| |||||| |||| Sbjct: 111131 ggcattttctctaccccttcttaccctgaaaaagcaggggcaccttgcgtccttgaaccg 111072 Query: 71 ataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggtagtnc 130 |||||||| ||| || |||||||||||| ||||||| || | ||||||| |||||||| | Sbjct: 111071 ataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggtagtac 111012 Query: 131 aggaatatngacctgt 146 |||||||| |||||| Sbjct: 111011 aggaatattcacctgt 110996
>emb|X06235.1|MIOBRRNP Oenothera berteriana mitDNA with part of plastid rRNA operon Length = 2900 Score = 123 bits (62), Expect = 2e-25 Identities = 114/136 (83%) Strand = Plus / Minus Query: 11 ggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaaacct 70 ||| |||| | ||||| || ||||| ||||||||||||| |||||| |||||| |||| Sbjct: 1176 ggcattttctctaccccttcttaccctgaaaaagcaggggcaccttgcgtccttgaaccg 1117 Query: 71 ataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggtagtnc 130 |||||||| ||| || |||||||||||| ||||||| || | ||||||| |||||||| | Sbjct: 1116 ataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggtagtac 1057 Query: 131 aggaatatngacctgt 146 |||||||| |||||| Sbjct: 1056 aggaatattcacctgt 1041
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 115 bits (58), Expect = 4e-23 Identities = 113/136 (83%) Strand = Plus / Plus Query: 11 ggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaaacct 70 ||| |||| | ||||| || ||||| ||||||| ||||| |||||| |||||| |||| Sbjct: 132418 ggcattttctctaccccttcttaccctgaaaaaacagggacaccttgcgtccttgaaccg 132477 Query: 71 ataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggtagtnc 130 |||||||| ||| || |||||||||||| ||||||| || | ||||||| |||||||| | Sbjct: 132478 ataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggtagtac 132537 Query: 131 aggaatatngacctgt 146 |||||||| |||||| Sbjct: 132538 aggaatattcacctgt 132553 Score = 115 bits (58), Expect = 4e-23 Identities = 113/136 (83%) Strand = Plus / Minus Query: 11 ggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaaacct 70 ||| |||| | ||||| || ||||| ||||||| ||||| |||||| |||||| |||| Sbjct: 106231 ggcattttctctaccccttcttaccctgaaaaaacagggacaccttgcgtccttgaaccg 106172 Query: 71 ataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggtagtnc 130 |||||||| ||| || |||||||||||| ||||||| || | ||||||| |||||||| | Sbjct: 106171 ataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggtagtac 106112 Query: 131 aggaatatngacctgt 146 |||||||| |||||| Sbjct: 106111 aggaatattcacctgt 106096
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 115 bits (58), Expect = 4e-23 Identities = 113/136 (83%) Strand = Plus / Plus Query: 11 ggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaaacct 70 ||| |||| | ||||| || ||||| ||||||| ||||| |||||| |||||| |||| Sbjct: 128989 ggcattttctctaccccttcttaccctgaaaaaacaggggcaccttgcgtccttgaaccg 129048 Query: 71 ataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggtagtnc 130 |||||||| ||| || |||||||||||| ||||||| || | ||||||| |||||||| | Sbjct: 129049 ataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggtagtac 129108 Query: 131 aggaatatngacctgt 146 |||||||| |||||| Sbjct: 129109 aggaatattcacctgt 129124 Score = 115 bits (58), Expect = 4e-23 Identities = 113/136 (83%) Strand = Plus / Minus Query: 11 ggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaaacct 70 ||| |||| | ||||| || ||||| ||||||| ||||| |||||| |||||| |||| Sbjct: 103467 ggcattttctctaccccttcttaccctgaaaaaacaggggcaccttgcgtccttgaaccg 103408 Query: 71 ataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggtagtnc 130 |||||||| ||| || |||||||||||| ||||||| || | ||||||| |||||||| | Sbjct: 103407 ataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggtagtac 103348 Query: 131 aggaatatngacctgt 146 |||||||| |||||| Sbjct: 103347 aggaatattcacctgt 103332
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 115 bits (58), Expect = 4e-23 Identities = 116/140 (82%) Strand = Plus / Minus Query: 7 tcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaa 66 |||||| |||| | ||||| || ||||| ||||||||||||| |||||| |||||| | Sbjct: 1546 tcgaggtattttctctaccccttcttaccctgaaaaagcaggggcaccttgcgtccttga 1487 Query: 67 acctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggta 126 ||| |||||||| ||| || |||||||||||| ||||||| || | ||||||| |||| | Sbjct: 1486 accgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggca 1427 Query: 127 gtncaggaatatngacctgt 146 || ||||||||| |||||| Sbjct: 1426 gtacaggaatattcacctgt 1407
>gb|DQ481232.1| Populus suaveolens unknown gene Length = 854 Score = 113 bits (57), Expect = 1e-22 Identities = 110/132 (83%) Strand = Plus / Minus Query: 7 tcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaa 66 ||||||| |||| | ||||| || ||||| ||||||| ||||| ||| || |||||| | Sbjct: 496 tcgaggcattttctctaccccttcttaccctgaaaaaacagggacaccgtgcgtccttga 437 Query: 67 acctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggta 126 ||| |||||||| ||| || |||||||||||| ||||||| || | ||||||| |||||| Sbjct: 436 accgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggta 377 Query: 127 gtncaggaatat 138 || ||||||||| Sbjct: 376 gtacaggaatat 365
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 111 bits (56), Expect = 6e-22 Identities = 94/110 (85%) Strand = Plus / Plus Query: 37 tgaaaaagcagggtnaccttgngtccttaaacctataaccatttttnggttaacctagcc 96 |||||||||| ||| |||||| |||||| |||| |||||||| ||| || |||||||||| Sbjct: 133477 tgaaaaagcaaggtcaccttgcgtccttgaaccgataaccatctttcggctaacctagcc 133536 Query: 97 tcntccgtccntcngnaccaacanggggtagtncaggaatatngacctgt 146 || ||||||| || | ||||||| |||||||| ||||||||| |||||| Sbjct: 133537 tcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgt 133586 Score = 111 bits (56), Expect = 6e-22 Identities = 94/110 (85%) Strand = Plus / Minus Query: 37 tgaaaaagcagggtnaccttgngtccttaaacctataaccatttttnggttaacctagcc 96 |||||||||| ||| |||||| |||||| |||| |||||||| ||| || |||||||||| Sbjct: 106805 tgaaaaagcaaggtcaccttgcgtccttgaaccgataaccatctttcggctaacctagcc 106746 Query: 97 tcntccgtccntcngnaccaacanggggtagtncaggaatatngacctgt 146 || ||||||| || | ||||||| |||||||| ||||||||| |||||| Sbjct: 106745 tcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgt 106696
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 109 bits (55), Expect = 2e-21 Identities = 117/141 (82%), Gaps = 1/141 (0%) Strand = Plus / Plus Query: 7 tcgaggcnttttntttacccntttttaccntgaaaaa-gcagggtnaccttgngtcctta 65 ||||||| ||| | ||||| || ||||| ||||||| ||| ||| |||||| |||||| Sbjct: 138034 tcgaggcatttcctctaccccttcttaccctgaaaaaagcaaggtcaccttgcgtccttg 138093 Query: 66 aacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggt 125 |||| |||||||| ||| || |||||||||||| ||||||| || | ||||||| ||||| Sbjct: 138094 aaccgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggt 138153 Query: 126 agtncaggaatatngacctgt 146 ||| ||||||||| |||||| Sbjct: 138154 agtacaggaatattcacctgt 138174 Score = 109 bits (55), Expect = 2e-21 Identities = 117/141 (82%), Gaps = 1/141 (0%) Strand = Plus / Minus Query: 7 tcgaggcnttttntttacccntttttaccntgaaaaa-gcagggtnaccttgngtcctta 65 ||||||| ||| | ||||| || ||||| ||||||| ||| ||| |||||| |||||| Sbjct: 111911 tcgaggcatttcctctaccccttcttaccctgaaaaaagcaaggtcaccttgcgtccttg 111852 Query: 66 aacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggt 125 |||| |||||||| ||| || |||||||||||| ||||||| || | ||||||| ||||| Sbjct: 111851 aaccgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggt 111792 Query: 126 agtncaggaatatngacctgt 146 ||| ||||||||| |||||| Sbjct: 111791 agtacaggaatattcacctgt 111771
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 107 bits (54), Expect = 9e-21 Identities = 115/140 (82%) Strand = Plus / Plus Query: 7 tcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaa 66 ||||||| |||| | ||||| || ||||| ||||||||||||| ||||| || ||| | Sbjct: 135393 tcgaggcattttctctaccccttcttaccctgaaaaagcagggacaccttacgttcttga 135452 Query: 67 acctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggta 126 ||| |||||||| ||| || |||||||||||| ||||||| || | ||||||| |||| | Sbjct: 135453 accgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggca 135512 Query: 127 gtncaggaatatngacctgt 146 || ||||||||| |||||| Sbjct: 135513 gtacaggaatattcacctgt 135532 Score = 107 bits (54), Expect = 9e-21 Identities = 115/140 (82%) Strand = Plus / Minus Query: 7 tcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaa 66 ||||||| |||| | ||||| || ||||| ||||||||||||| ||||| || ||| | Sbjct: 108164 tcgaggcattttctctaccccttcttaccctgaaaaagcagggacaccttacgttcttga 108105 Query: 67 acctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggta 126 ||| |||||||| ||| || |||||||||||| ||||||| || | ||||||| |||| | Sbjct: 108104 accgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggca 108045 Query: 127 gtncaggaatatngacctgt 146 || ||||||||| |||||| Sbjct: 108044 gtacaggaatattcacctgt 108025
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 107 bits (54), Expect = 9e-21 Identities = 115/140 (82%) Strand = Plus / Plus Query: 7 tcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaa 66 ||||||| |||| | ||||| || ||||| ||||||||||||| ||||| || ||| | Sbjct: 134001 tcgaggcattttctctaccccttcttaccctgaaaaagcagggacaccttacgttcttga 134060 Query: 67 acctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggta 126 ||| |||||||| ||| || |||||||||||| ||||||| || | || |||| |||||| Sbjct: 134061 accgataaccatctttcggctaacctagcctcctccgtccctcgggactaacaaggggta 134120 Query: 127 gtncaggaatatngacctgt 146 || ||||||||| |||||| Sbjct: 134121 gtacaggaatattcacctgt 134140 Score = 107 bits (54), Expect = 9e-21 Identities = 115/140 (82%) Strand = Plus / Minus Query: 7 tcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaa 66 ||||||| |||| | ||||| || ||||| ||||||||||||| ||||| || ||| | Sbjct: 107035 tcgaggcattttctctaccccttcttaccctgaaaaagcagggacaccttacgttcttga 106976 Query: 67 acctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggta 126 ||| |||||||| ||| || |||||||||||| ||||||| || | || |||| |||||| Sbjct: 106975 accgataaccatctttcggctaacctagcctcctccgtccctcgggactaacaaggggta 106916 Query: 127 gtncaggaatatngacctgt 146 || ||||||||| |||||| Sbjct: 106915 gtacaggaatattcacctgt 106896
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 107 bits (54), Expect = 9e-21 Identities = 112/136 (82%) Strand = Plus / Plus Query: 11 ggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaaacct 70 ||| |||| | ||||| || ||||| ||||||| ||||| |||||| || ||| |||| Sbjct: 131457 ggcattttctctaccccttcttaccctgaaaaaacagggacaccttgcgttcttgaaccg 131516 Query: 71 ataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggtagtnc 130 |||||||| ||| || |||||||||||| ||||||| || | ||||||| |||||||| | Sbjct: 131517 ataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggtagtac 131576 Query: 131 aggaatatngacctgt 146 |||||||| |||||| Sbjct: 131577 aggaatattcacctgt 131592 Score = 107 bits (54), Expect = 9e-21 Identities = 112/136 (82%) Strand = Plus / Minus Query: 11 ggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaaacct 70 ||| |||| | ||||| || ||||| ||||||| ||||| |||||| || ||| |||| Sbjct: 105307 ggcattttctctaccccttcttaccctgaaaaaacagggacaccttgcgttcttgaaccg 105248 Query: 71 ataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggtagtnc 130 |||||||| ||| || |||||||||||| ||||||| || | ||||||| |||||||| | Sbjct: 105247 ataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggtagtac 105188 Query: 131 aggaatatngacctgt 146 |||||||| |||||| Sbjct: 105187 aggaatattcacctgt 105172
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 107 bits (54), Expect = 9e-21 Identities = 115/140 (82%) Strand = Plus / Plus Query: 7 tcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaa 66 ||||||| |||| | ||||| || ||||| ||||||||||||| ||||| || ||| | Sbjct: 134136 tcgaggcattttctctaccccttcttaccctgaaaaagcagggacaccttacgttcttga 134195 Query: 67 acctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggta 126 ||| |||||||| ||| || |||||||||||| ||||||| || | || |||| |||||| Sbjct: 134196 accgataaccatctttcggctaacctagcctcctccgtccctcgggactaacaaggggta 134255 Query: 127 gtncaggaatatngacctgt 146 || ||||||||| |||||| Sbjct: 134256 gtacaggaatattcacctgt 134275 Score = 107 bits (54), Expect = 9e-21 Identities = 115/140 (82%) Strand = Plus / Minus Query: 7 tcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaa 66 ||||||| |||| | ||||| || ||||| ||||||||||||| ||||| || ||| | Sbjct: 107207 tcgaggcattttctctaccccttcttaccctgaaaaagcagggacaccttacgttcttga 107148 Query: 67 acctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggta 126 ||| |||||||| ||| || |||||||||||| ||||||| || | || |||| |||||| Sbjct: 107147 accgataaccatctttcggctaacctagcctcctccgtccctcgggactaacaaggggta 107088 Query: 127 gtncaggaatatngacctgt 146 || ||||||||| |||||| Sbjct: 107087 gtacaggaatattcacctgt 107068
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 107 bits (54), Expect = 9e-21 Identities = 115/140 (82%) Strand = Plus / Plus Query: 7 tcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaa 66 ||||||| |||| | ||||| || ||||| ||||||||||||| ||||| || ||| | Sbjct: 134134 tcgaggcattttctctaccccttcttaccctgaaaaagcagggacaccttacgttcttga 134193 Query: 67 acctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggta 126 ||| |||||||| ||| || |||||||||||| ||||||| || | || |||| |||||| Sbjct: 134194 accgataaccatctttcggctaacctagcctcctccgtccctcgggactaacaaggggta 134253 Query: 127 gtncaggaatatngacctgt 146 || ||||||||| |||||| Sbjct: 134254 gtacaggaatattcacctgt 134273 Score = 107 bits (54), Expect = 9e-21 Identities = 115/140 (82%) Strand = Plus / Minus Query: 7 tcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaa 66 ||||||| |||| | ||||| || ||||| ||||||||||||| ||||| || ||| | Sbjct: 107204 tcgaggcattttctctaccccttcttaccctgaaaaagcagggacaccttacgttcttga 107145 Query: 67 acctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggta 126 ||| |||||||| ||| || |||||||||||| ||||||| || | || |||| |||||| Sbjct: 107144 accgataaccatctttcggctaacctagcctcctccgtccctcgggactaacaaggggta 107085 Query: 127 gtncaggaatatngacctgt 146 || ||||||||| |||||| Sbjct: 107084 gtacaggaatattcacctgt 107065
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 107 bits (54), Expect = 9e-21 Identities = 115/140 (82%) Strand = Plus / Plus Query: 7 tcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaa 66 ||||||| |||| | ||||| || ||||| ||||||||||||| ||||| || ||| | Sbjct: 134046 tcgaggcattttctctaccccttcttaccctgaaaaagcagggacaccttacgttcttga 134105 Query: 67 acctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggta 126 ||| |||||||| ||| || |||||||||||| ||||||| || | || |||| |||||| Sbjct: 134106 accgataaccatctttcggctaacctagcctcctccgtccctcgggactaacaaggggta 134165 Query: 127 gtncaggaatatngacctgt 146 || ||||||||| |||||| Sbjct: 134166 gtacaggaatattcacctgt 134185 Score = 107 bits (54), Expect = 9e-21 Identities = 115/140 (82%) Strand = Plus / Minus Query: 7 tcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaa 66 ||||||| |||| | ||||| || ||||| ||||||||||||| ||||| || ||| | Sbjct: 107082 tcgaggcattttctctaccccttcttaccctgaaaaagcagggacaccttacgttcttga 107023 Query: 67 acctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggta 126 ||| |||||||| ||| || |||||||||||| ||||||| || | || |||| |||||| Sbjct: 107022 accgataaccatctttcggctaacctagcctcctccgtccctcgggactaacaaggggta 106963 Query: 127 gtncaggaatatngacctgt 146 || ||||||||| |||||| Sbjct: 106962 gtacaggaatattcacctgt 106943
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 107 bits (54), Expect = 9e-21 Identities = 115/140 (82%) Strand = Plus / Plus Query: 7 tcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaa 66 ||||||| |||| | ||||| || ||||| ||||||||||||| ||||| || ||| | Sbjct: 134484 tcgaggcattttctctaccccttcttaccctgaaaaagcagggacaccttacgttcttga 134543 Query: 67 acctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggta 126 ||| |||||||| ||| || |||||||||||| ||||||| || | ||||||| |||| | Sbjct: 134544 accgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggca 134603 Query: 127 gtncaggaatatngacctgt 146 || ||||||||| |||||| Sbjct: 134604 gtacaggaatattcacctgt 134623 Score = 107 bits (54), Expect = 9e-21 Identities = 115/140 (82%) Strand = Plus / Minus Query: 7 tcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaa 66 ||||||| |||| | ||||| || ||||| ||||||||||||| ||||| || ||| | Sbjct: 107654 tcgaggcattttctctaccccttcttaccctgaaaaagcagggacaccttacgttcttga 107595 Query: 67 acctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggta 126 ||| |||||||| ||| || |||||||||||| ||||||| || | ||||||| |||| | Sbjct: 107594 accgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggca 107535 Query: 127 gtncaggaatatngacctgt 146 || ||||||||| |||||| Sbjct: 107534 gtacaggaatattcacctgt 107515
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 107 bits (54), Expect = 9e-21 Identities = 115/140 (82%) Strand = Plus / Plus Query: 7 tcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaa 66 ||||||| |||| | ||||| || ||||| ||||||||||||| ||||| || ||| | Sbjct: 134013 tcgaggcattttctctaccccttcttaccctgaaaaagcagggacaccttacgttcttga 134072 Query: 67 acctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggta 126 ||| |||||||| ||| || |||||||||||| ||||||| || | || |||| |||||| Sbjct: 134073 accgataaccatctttcggctaacctagcctcctccgtccctcgggactaacaaggggta 134132 Query: 127 gtncaggaatatngacctgt 146 || ||||||||| |||||| Sbjct: 134133 gtacaggaatattcacctgt 134152 Score = 107 bits (54), Expect = 9e-21 Identities = 115/140 (82%) Strand = Plus / Minus Query: 7 tcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaa 66 ||||||| |||| | ||||| || ||||| ||||||||||||| ||||| || ||| | Sbjct: 107049 tcgaggcattttctctaccccttcttaccctgaaaaagcagggacaccttacgttcttga 106990 Query: 67 acctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggta 126 ||| |||||||| ||| || |||||||||||| ||||||| || | || |||| |||||| Sbjct: 106989 accgataaccatctttcggctaacctagcctcctccgtccctcgggactaacaaggggta 106930 Query: 127 gtncaggaatatngacctgt 146 || ||||||||| |||||| Sbjct: 106929 gtacaggaatattcacctgt 106910
>gb|AF322910.1|AF322910 Vigna radiata 23S ribosomal RNA, partial sequence; chloroplast gene for chloroplast product Length = 1041 Score = 105 bits (53), Expect = 4e-20 Identities = 116/140 (82%), Gaps = 1/140 (0%) Strand = Plus / Minus Query: 7 tcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaa 66 ||||||| |||| | ||||| || ||||| ||||||||||||| ||| || |||||| | Sbjct: 813 tcgaggcattttctctaccccttattaccctgaaaaagcaggggcaccatgcgtccttga 754 Query: 67 acctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggta 126 ||| |||||||| ||| || |||||||||||| ||||||| || | ||||||| ||||| Sbjct: 753 accgataaccatctttcggctaacctagcctcctccgtccctc-ggaccaacaaagggta 695 Query: 127 gtncaggaatatngacctgt 146 || ||||||||| |||||| Sbjct: 694 gtacaggaatattcacctgt 675
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 105 bits (53), Expect = 4e-20 Identities = 115/140 (82%), Gaps = 4/140 (2%) Strand = Plus / Minus Query: 7 tcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaa 66 ||||||| |||| | ||||| || ||||| |||||| |||| |||||| |||||| | Sbjct: 89890 tcgaggcattttctctaccccttcttaccctgaaaa----gggtaaccttgcgtccttga 89835 Query: 67 acctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggta 126 ||| |||||||| ||| || |||||||||||| ||||||| || | ||||||| |||||| Sbjct: 89834 accgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggta 89775 Query: 127 gtncaggaatatngacctgt 146 || ||||||||| |||||| Sbjct: 89774 gtacaggaatattcacctgt 89755
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 103 bits (52), Expect = 1e-19 Identities = 119/146 (81%) Strand = Plus / Plus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| ||||| || ||||| ||| ||||||||| ||||| || Sbjct: 141328 ctcggctcgaggcattttcactaccccttcttaccctgacaaagcagggacaccttacgt 141387 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||| |||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 141388 tcttaaaccgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaa 141447 Query: 121 ggggtagtncaggaatatngacctgt 146 |||| ||| ||||||||| |||||| Sbjct: 141448 ggggcagtacaggaatattcacctgt 141473 Score = 103 bits (52), Expect = 1e-19 Identities = 119/146 (81%) Strand = Plus / Minus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| ||||| || ||||| ||| ||||||||| ||||| || Sbjct: 112000 ctcggctcgaggcattttcactaccccttcttaccctgacaaagcagggacaccttacgt 111941 Query: 61 ccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacan 120 |||||||| |||||||| ||| || |||||||||||| ||||||| || | ||||||| Sbjct: 111940 tcttaaaccgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaa 111881 Query: 121 ggggtagtncaggaatatngacctgt 146 |||| ||| ||||||||| |||||| Sbjct: 111880 ggggcagtacaggaatattcacctgt 111855
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 101 bits (51), Expect = 6e-19 Identities = 97/116 (83%) Strand = Plus / Plus Query: 31 ttaccntgaaaaagcagggtnaccttgngtccttaaacctataaccatttttnggttaac 90 ||||| | ||||| ||||| |||||| |||||| |||| |||||||| ||| || |||| Sbjct: 134380 ttaccctaaaaaaacaggggcaccttgcgtccttgaaccgataaccatctttcggctaac 134439 Query: 91 ctagcctcntccgtccntcngnaccaacanggggtagtncaggaatatngacctgt 146 |||||||| ||||||| || | ||||||| |||||||| ||||||||| |||||| Sbjct: 134440 ctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgt 134495 Score = 101 bits (51), Expect = 6e-19 Identities = 97/116 (83%) Strand = Plus / Minus Query: 31 ttaccntgaaaaagcagggtnaccttgngtccttaaacctataaccatttttnggttaac 90 ||||| | ||||| ||||| |||||| |||||| |||| |||||||| ||| || |||| Sbjct: 107526 ttaccctaaaaaaacaggggcaccttgcgtccttgaaccgataaccatctttcggctaac 107467 Query: 91 ctagcctcntccgtccntcngnaccaacanggggtagtncaggaatatngacctgt 146 |||||||| ||||||| || | ||||||| |||||||| ||||||||| |||||| Sbjct: 107466 ctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgt 107411
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 101 bits (51), Expect = 6e-19 Identities = 86/101 (85%) Strand = Plus / Minus Query: 46 agggtnaccttgngtccttaaacctataaccatttttnggttaacctagcctcntccgtc 105 ||||| |||||| |||||| |||| |||||||| ||| || |||||||||||| |||||| Sbjct: 87768 agggtcaccttgcgtccttgaaccgataaccatctttcggctaacctagcctcctccgtc 87709 Query: 106 cntcngnaccaacanggggtagtncaggaatatngacctgt 146 | || | ||||||| |||||||| ||||||||| |||||| Sbjct: 87708 cctcgggaccaacaaggggtagtacaggaatattcacctgt 87668
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 101 bits (51), Expect = 6e-19 Identities = 97/116 (83%) Strand = Plus / Plus Query: 31 ttaccntgaaaaagcagggtnaccttgngtccttaaacctataaccatttttnggttaac 90 ||||| | ||||| ||||| |||||| |||||| |||| |||||||| ||| || |||| Sbjct: 134659 ttaccctaaaaaaacaggggcaccttgcgtccttgaaccgataaccatctttcggctaac 134718 Query: 91 ctagcctcntccgtccntcngnaccaacanggggtagtncaggaatatngacctgt 146 |||||||| ||||||| || | ||||||| |||||||| ||||||||| |||||| Sbjct: 134719 ctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgt 134774 Score = 101 bits (51), Expect = 6e-19 Identities = 97/116 (83%) Strand = Plus / Minus Query: 31 ttaccntgaaaaagcagggtnaccttgngtccttaaacctataaccatttttnggttaac 90 ||||| | ||||| ||||| |||||| |||||| |||| |||||||| ||| || |||| Sbjct: 107748 ttaccctaaaaaaacaggggcaccttgcgtccttgaaccgataaccatctttcggctaac 107689 Query: 91 ctagcctcntccgtccntcngnaccaacanggggtagtncaggaatatngacctgt 146 |||||||| ||||||| || | ||||||| |||||||| ||||||||| |||||| Sbjct: 107688 ctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgt 107633
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 99.6 bits (50), Expect = 2e-18 Identities = 114/140 (81%) Strand = Plus / Plus Query: 7 tcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaa 66 ||||||| |||| | ||||| || ||||| ||| ||||||||| ||||| || ||| | Sbjct: 134755 tcgaggcattttctctaccccttcttaccctgacaaagcagggacaccttacgttcttga 134814 Query: 67 acctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggta 126 ||| |||||||| ||| || |||||||||||| ||||||| || | ||||||| |||| | Sbjct: 134815 accgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggca 134874 Query: 127 gtncaggaatatngacctgt 146 || ||||||||| |||||| Sbjct: 134875 gtacaggaatattcacctgt 134894 Score = 99.6 bits (50), Expect = 2e-18 Identities = 114/140 (81%) Strand = Plus / Minus Query: 7 tcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaa 66 ||||||| |||| | ||||| || ||||| ||| ||||||||| ||||| || ||| | Sbjct: 107875 tcgaggcattttctctaccccttcttaccctgacaaagcagggacaccttacgttcttga 107816 Query: 67 acctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggta 126 ||| |||||||| ||| || |||||||||||| ||||||| || | ||||||| |||| | Sbjct: 107815 accgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggca 107756 Query: 127 gtncaggaatatngacctgt 146 || ||||||||| |||||| Sbjct: 107755 gtacaggaatattcacctgt 107736
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 99.6 bits (50), Expect = 2e-18 Identities = 115/140 (82%), Gaps = 1/140 (0%) Strand = Plus / Minus Query: 7 tcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaa 66 |||||| |||| | ||||| || ||||| |||||| |||||| |||||| |||||| | Sbjct: 1561 tcgaggtattttctctaccccttcttaccctgaaaa-gcaggggcaccttgcgtccttga 1503 Query: 67 acctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggta 126 ||| |||||||| ||| || |||||||||||| ||||||| || | ||||||| |||| | Sbjct: 1502 accgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggca 1443 Query: 127 gtncaggaatatngacctgt 146 || ||||||||| |||||| Sbjct: 1442 gtacaggaatattcacctgt 1423
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 99.6 bits (50), Expect = 2e-18 Identities = 114/140 (81%) Strand = Plus / Minus Query: 7 tcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaa 66 ||||||| |||| | ||||| || ||||| ||| ||||||||| ||||| || ||| | Sbjct: 3069 tcgaggcattttctctaccccttcttaccctgacaaagcagggacaccttacgttcttga 3010 Query: 67 acctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggta 126 ||| |||||||| ||| || |||||||||||| ||||||| || | ||||||| |||| | Sbjct: 3009 accgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggca 2950 Query: 127 gtncaggaatatngacctgt 146 || ||||||||| |||||| Sbjct: 2949 gtacaggaatattcacctgt 2930
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 99.6 bits (50), Expect = 2e-18 Identities = 111/136 (81%) Strand = Plus / Minus Query: 11 ggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaaacct 70 ||| |||| | ||||| |||||||| |||| | | ||| |||||| |||||| |||| Sbjct: 1540 ggcattttctctacccctttttaccctgaacacaccgggacaccttgcgtccttgaaccg 1481 Query: 71 ataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggtagtnc 130 |||||||| ||| || |||||||||||| ||||||| || | ||||||| |||||||| | Sbjct: 1480 ataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggtagtac 1421 Query: 131 aggaatatngacctgt 146 |||||||| |||||| Sbjct: 1420 aggaatattcacctgt 1405
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 99.6 bits (50), Expect = 2e-18 Identities = 114/140 (81%) Strand = Plus / Minus Query: 7 tcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaa 66 ||||||| |||| | ||||| || ||||| ||| ||||||||| ||||| || ||| | Sbjct: 3314 tcgaggcattttctctaccccttcttaccctgacaaagcagggacaccttacgttcttga 3255 Query: 67 acctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggta 126 ||| |||||||| ||| || |||||||||||| ||||||| || | ||||||| |||| | Sbjct: 3254 accgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggca 3195 Query: 127 gtncaggaatatngacctgt 146 || ||||||||| |||||| Sbjct: 3194 gtacaggaatattcacctgt 3175
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 99.6 bits (50), Expect = 2e-18 Identities = 115/140 (82%), Gaps = 1/140 (0%) Strand = Plus / Minus Query: 7 tcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaa 66 ||||||| |||| | ||||| || ||||| ||||||| |||||| ||||| |||||| | Sbjct: 2040 tcgaggcattttctctaccccttcttaccctgaaaaa-cagggtcacctttcgtccttga 1982 Query: 67 acctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggta 126 ||| |||||||| ||| || |||||||||||| ||||||| || | || ||| |||||| Sbjct: 1981 accgataaccatctttcggctaacctagcctcctccgtccctcgggccctacaaggggta 1922 Query: 127 gtncaggaatatngacctgt 146 || ||||||||| |||||| Sbjct: 1921 gtacaggaatattcacctgt 1902
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 99.6 bits (50), Expect = 2e-18 Identities = 114/140 (81%) Strand = Plus / Plus Query: 7 tcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaa 66 ||||||| |||| | ||||| || ||||| ||| ||||||||| ||||| || ||| | Sbjct: 134753 tcgaggcattttctctaccccttcttaccctgacaaagcagggacaccttacgttcttga 134812 Query: 67 acctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggta 126 ||| |||||||| ||| || |||||||||||| ||||||| || | ||||||| |||| | Sbjct: 134813 accgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggca 134872 Query: 127 gtncaggaatatngacctgt 146 || ||||||||| |||||| Sbjct: 134873 gtacaggaatattcacctgt 134892 Score = 99.6 bits (50), Expect = 2e-18 Identities = 114/140 (81%) Strand = Plus / Minus Query: 7 tcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaa 66 ||||||| |||| | ||||| || ||||| ||| ||||||||| ||||| || ||| | Sbjct: 107873 tcgaggcattttctctaccccttcttaccctgacaaagcagggacaccttacgttcttga 107814 Query: 67 acctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggta 126 ||| |||||||| ||| || |||||||||||| ||||||| || | ||||||| |||| | Sbjct: 107813 accgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggca 107754 Query: 127 gtncaggaatatngacctgt 146 || ||||||||| |||||| Sbjct: 107753 gtacaggaatattcacctgt 107734
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 99.6 bits (50), Expect = 2e-18 Identities = 114/140 (81%) Strand = Plus / Minus Query: 7 tcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaa 66 ||||||| |||| | ||||| || ||||| ||| ||||||||| ||||| || ||| | Sbjct: 1641 tcgaggcattttctctaccccttcttaccctgacaaagcagggacaccttacgttcttga 1582 Query: 67 acctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggta 126 ||| |||||||| ||| || |||||||||||| ||||||| || | ||||||| |||| | Sbjct: 1581 accgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggca 1522 Query: 127 gtncaggaatatngacctgt 146 || ||||||||| |||||| Sbjct: 1521 gtacaggaatattcacctgt 1502
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 93.7 bits (47), Expect = 1e-16 Identities = 75/87 (86%) Strand = Plus / Minus Query: 52 accttgngtccttaaacctataaccatttttnggttaacctagcctcntccgtccntcng 111 |||||| |||||| |||| |||||||| ||| || |||||||||||| ||||||| || | Sbjct: 1488 accttgagtccttgaaccgataaccatctttcggctaacctagcctcctccgtccctcgg 1429 Query: 112 naccaacanggggtagtncaggaatat 138 ||||||| |||||||| ||||||||| Sbjct: 1428 gaccaacaaggggtagtacaggaatat 1402
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 91.7 bits (46), Expect = 5e-16 Identities = 90/108 (83%) Strand = Plus / Plus Query: 39 aaaaagcagggtnaccttgngtccttaaacctataaccatttttnggttaacctagcctc 98 |||| ||| ||| |||||| |||||| |||| |||||||||||| || |||||||||||| Sbjct: 5050 aaaaggcaaggtcaccttgcgtccttgaaccgataaccatttttcggctaacctagcctc 5109 Query: 99 ntccgtccntcngnaccaacanggggtagtncaggaatatngacctgt 146 ||||||| || | ||||||| || |||| ||||||||| |||||| Sbjct: 5110 ctccgtccctcgggaccaacaaaggatagtacaggaatattcacctgt 5157
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 89.7 bits (45), Expect = 2e-15 Identities = 113/139 (81%), Gaps = 1/139 (0%) Strand = Plus / Minus Query: 9 gaggcnttttntttacccntttttaccntgaaaaagcagggtn-accttgngtccttaaa 67 ||||| |||| | ||||| || ||||| ||||||| ||||| |||||| || ||| || Sbjct: 5764 gaggcattttctctaccccttcttaccctgaaaaaacagggggcaccttgtgttcttgaa 5705 Query: 68 cctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggtag 127 || |||||||| ||| || |||||||||||| ||||||| || | ||||||| | ||||| Sbjct: 5704 ccgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaagaggtag 5645 Query: 128 tncaggaatatngacctgt 146 | ||||||||| |||||| Sbjct: 5644 tacaggaatattcacctgt 5626
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 89.7 bits (45), Expect = 2e-15 Identities = 113/139 (81%), Gaps = 1/139 (0%) Strand = Plus / Plus Query: 9 gaggcnttttntttacccntttttaccntgaaaaagcagggtn-accttgngtccttaaa 67 ||||| |||| | ||||| || ||||| ||||||| ||||| |||||| || ||| || Sbjct: 22161 gaggcattttctctaccccttcttaccctgaaaaaacagggggcaccttgtgttcttgaa 22220 Query: 68 cctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggtag 127 || |||||||| ||| || |||||||||||| ||||||| || | ||||||| | ||||| Sbjct: 22221 ccgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaagaggtag 22280 Query: 128 tncaggaatatngacctgt 146 | ||||||||| |||||| Sbjct: 22281 tacaggaatattcacctgt 22299
>ref|NM_195959.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0075K12.8), mRNA Length = 858 Score = 87.7 bits (44), Expect = 9e-15 Identities = 65/74 (87%) Strand = Plus / Plus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| ||||||| |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 785 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 844 Query: 61 ccttaaacctataa 74 |||||||||||||| Sbjct: 845 ccttaaacctataa 858
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 87.7 bits (44), Expect = 9e-15 Identities = 80/95 (84%) Strand = Plus / Plus Query: 52 accttgngtccttaaacctataaccatttttnggttaacctagcctcntccgtccntcng 111 |||||| |||||| |||| |||||||| ||| || |||||||||||| ||||||| || | Sbjct: 126938 accttgcgtccttgaaccgataaccatctttcggctaacctagcctcctccgtccctcgg 126997 Query: 112 naccaacanggggtagtncaggaatatngacctgt 146 ||||||| || ||||| ||||||||| |||||| Sbjct: 126998 gaccaacaaggagtagtacaggaatattcacctgt 127032 Score = 87.7 bits (44), Expect = 9e-15 Identities = 80/95 (84%) Strand = Plus / Minus Query: 52 accttgngtccttaaacctataaccatttttnggttaacctagcctcntccgtccntcng 111 |||||| |||||| |||| |||||||| ||| || |||||||||||| ||||||| || | Sbjct: 96509 accttgcgtccttgaaccgataaccatctttcggctaacctagcctcctccgtccctcgg 96450 Query: 112 naccaacanggggtagtncaggaatatngacctgt 146 ||||||| || ||||| ||||||||| |||||| Sbjct: 96449 gaccaacaaggagtagtacaggaatattcacctgt 96415
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 85.7 bits (43), Expect = 3e-14 Identities = 91/109 (83%), Gaps = 1/109 (0%) Strand = Plus / Plus Query: 39 aaaaagcagggtnaccttgngtccttaaacctataa-ccatttttnggttaacctagcct 97 |||||||| ||| |||||| |||||| |||| |||| ||| ||| || ||||||||||| Sbjct: 140593 aaaaagcaaggtcaccttgcgtccttgaaccgataaaccacctttcggctaacctagcct 140652 Query: 98 cntccgtccntcngnaccaacanggggtagtncaggaatatngacctgt 146 | ||||||| || | ||||||| |||||||| ||||||||| |||||| Sbjct: 140653 cctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgt 140701 Score = 85.7 bits (43), Expect = 3e-14 Identities = 91/109 (83%), Gaps = 1/109 (0%) Strand = Plus / Minus Query: 39 aaaaagcagggtnaccttgngtccttaaacctataa-ccatttttnggttaacctagcct 97 |||||||| ||| |||||| |||||| |||| |||| ||| ||| || ||||||||||| Sbjct: 113064 aaaaagcaaggtcaccttgcgtccttgaaccgataaaccacctttcggctaacctagcct 113005 Query: 98 cntccgtccntcngnaccaacanggggtagtncaggaatatngacctgt 146 | ||||||| || | ||||||| |||||||| ||||||||| |||||| Sbjct: 113004 cctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgt 112956
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 83.8 bits (42), Expect = 1e-13 Identities = 113/140 (80%), Gaps = 1/140 (0%) Strand = Plus / Minus Query: 7 tcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaa 66 ||||||| |||| | ||||| || ||||| || ||| |||||| ||||| || ||| | Sbjct: 1005 tcgaggcattttctctaccccttcttaccctgcaaa-gcagggacaccttacgttcttga 947 Query: 67 acctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggta 126 ||| |||||||| ||| || |||||||||||| ||||||| || | ||||||| |||| | Sbjct: 946 accgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggca 887 Query: 127 gtncaggaatatngacctgt 146 || ||||||||| |||||| Sbjct: 886 gtacaggaatattcacctgt 867
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 79.8 bits (40), Expect = 2e-12 Identities = 79/95 (83%) Strand = Plus / Minus Query: 52 accttgngtccttaaacctataaccatttttnggttaacctagcctcntccgtccntcng 111 |||||| ||| || |||| |||||||| ||| || |||||||||||| | ||||| || | Sbjct: 1504 accttgcgtctttgaaccgataaccatctttcggctaacctagcctccttcgtccctcgg 1445 Query: 112 naccaacanggggtagtncaggaatatngacctgt 146 ||||||| |||||||| ||||||||| |||||| Sbjct: 1444 gaccaacaaggggtagtacaggaatattcacctgt 1410
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 79.8 bits (40), Expect = 2e-12 Identities = 79/95 (83%) Strand = Plus / Plus Query: 52 accttgngtccttaaacctataaccatttttnggttaacctagcctcntccgtccntcng 111 |||||| ||| || |||| |||||||| ||| || |||||||||||| | ||||| || | Sbjct: 116645 accttgcgtctttgaaccgataaccatctttcggctaacctagcctccttcgtccctcgg 116704 Query: 112 naccaacanggggtagtncaggaatatngacctgt 146 ||||||| |||||||| ||||||||| |||||| Sbjct: 116705 gaccaacaaggggtagtacaggaatattcacctgt 116739 Score = 79.8 bits (40), Expect = 2e-12 Identities = 79/95 (83%) Strand = Plus / Minus Query: 52 accttgngtccttaaacctataaccatttttnggttaacctagcctcntccgtccntcng 111 |||||| ||| || |||| |||||||| ||| || |||||||||||| | ||||| || | Sbjct: 91457 accttgcgtctttgaaccgataaccatctttcggctaacctagcctccttcgtccctcgg 91398 Query: 112 naccaacanggggtagtncaggaatatngacctgt 146 ||||||| |||||||| ||||||||| |||||| Sbjct: 91397 gaccaacaaggggtagtacaggaatattcacctgt 91363
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 75.8 bits (38), Expect = 3e-11 Identities = 112/140 (80%), Gaps = 1/140 (0%) Strand = Plus / Minus Query: 7 tcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngtccttaa 66 |||||| |||| | ||||| || ||||| ||||||| ||||| ||||| || ||| | Sbjct: 1549 tcgaggtattttctctaccccttcttaccctgaaaaa-cagggacaccttacgttcttga 1491 Query: 67 acctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggta 126 ||| |||||||| ||| || ||||||||||| ||||||| || | ||||||| |||||| Sbjct: 1490 accgataaccatcttttggctaacctagcctgctccgtccctcgggaccaacaaggggta 1431 Query: 127 gtncaggaatatngacctgt 146 || ||| ||||| |||||| Sbjct: 1430 gtacagaaatattcacctgt 1411
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 73.8 bits (37), Expect = 1e-10 Identities = 68/81 (83%) Strand = Plus / Minus Query: 66 aacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggt 125 |||| |||||||| ||| || |||||||||||| ||||||| || | ||||||| |||| Sbjct: 5978 aaccgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggc 5919 Query: 126 agtncaggaatatngacctgt 146 ||| ||||||||| |||||| Sbjct: 5918 agtacaggaatattaacctgt 5898
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 73.8 bits (37), Expect = 1e-10 Identities = 68/81 (83%) Strand = Plus / Minus Query: 66 aacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaacanggggt 125 |||| |||||||| ||| || |||||||||||| ||||||| || | ||||||| |||| Sbjct: 5978 aaccgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggc 5919 Query: 126 agtncaggaatatngacctgt 146 ||| ||||||||| |||||| Sbjct: 5918 agtacaggaatattaacctgt 5898
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 69.9 bits (35), Expect = 2e-09 Identities = 73/87 (83%), Gaps = 1/87 (1%) Strand = Plus / Plus Query: 52 accttgngtccttaaacctataaccatttttnggttaacctagcctcntccgtccntcng 111 |||||| ||||| |||| |||||||| ||| || |||||||||||| | ||||| || | Sbjct: 114709 accttgcatccttgaaccgataaccatctttcggctaacctagcctcct-cgtccctcgg 114767 Query: 112 naccaacanggggtagtncaggaatat 138 ||||||| |||||||| ||||||||| Sbjct: 114768 gaccaacaaggggtagtacaggaatat 114794 Score = 69.9 bits (35), Expect = 2e-09 Identities = 73/87 (83%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 52 accttgngtccttaaacctataaccatttttnggttaacctagcctcntccgtccntcng 111 |||||| ||||| |||| |||||||| ||| || |||||||||||| | ||||| || | Sbjct: 87411 accttgcatccttgaaccgataaccatctttcggctaacctagcctcct-cgtccctcgg 87353 Query: 112 naccaacanggggtagtncaggaatat 138 ||||||| |||||||| ||||||||| Sbjct: 87352 gaccaacaaggggtagtacaggaatat 87326
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 69.9 bits (35), Expect = 2e-09 Identities = 72/87 (82%) Strand = Plus / Minus Query: 52 accttgngtccttaaacctataaccatttttnggttaacctagcctcntccgtccntcng 111 |||||| ||||| |||| |||||||| ||| || ||||||||||| ||||||| || | Sbjct: 1508 accttgcatccttgaaccgataaccatctttcggctaacctagcctactccgtccctcgg 1449 Query: 112 naccaacanggggtagtncaggaatat 138 |||| || |||||||| ||||||||| Sbjct: 1448 gaccagcaaggggtagtacaggaatat 1422
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 65.9 bits (33), Expect = 3e-08 Identities = 79/96 (82%), Gaps = 1/96 (1%) Strand = Plus / Minus Query: 52 accttgngtccttaaacctataaccatttttnggttaacctagcctcntccgtccntcng 111 |||||| |||||| |||| |||||||| | | || |||||||||||| ||||||| || | Sbjct: 1505 accttgcgtccttgaaccgataaccatctctcggctaacctagcctcctccgtccctcgg 1446 Query: 112 naccaac-anggggtagtncaggaatatngacctgt 146 |||||| | ||||| || ||||||||| |||||| Sbjct: 1445 gaccaacaagggggtggtacaggaatattcacctgt 1410
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 63.9 bits (32), Expect = 1e-07 Identities = 69/84 (82%) Strand = Plus / Minus Query: 55 ttgngtccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnac 114 ||| |||||| |||| ||||||| ||| || |||||||||||| ||||||| || | || Sbjct: 145429 ttgcgtccttgaaccgataaccacctttcggctaacctagcctcctccgtccctcgggac 145370 Query: 115 caacanggggtagtncaggaatat 138 ||||| |||| ||| | ||||||| Sbjct: 145369 caacaaggggcagtacgggaatat 145346 Score = 63.9 bits (32), Expect = 1e-07 Identities = 69/84 (82%) Strand = Plus / Plus Query: 55 ttgngtccttaaacctataaccatttttnggttaacctagcctcntccgtccntcngnac 114 ||| |||||| |||| ||||||| ||| || |||||||||||| ||||||| || | || Sbjct: 87422 ttgcgtccttgaaccgataaccacctttcggctaacctagcctcctccgtccctcgggac 87481 Query: 115 caacanggggtagtncaggaatat 138 ||||| |||| ||| | ||||||| Sbjct: 87482 caacaaggggcagtacgggaatat 87505
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 63.9 bits (32), Expect = 1e-07 Identities = 93/117 (79%) Strand = Plus / Plus Query: 22 tacccntttttaccntgaaaaagcagggtnaccttgngtccttaaacctataaccatttt 81 ||||| |||| ||| | ||||| |||| |||||| ||||| |||| ||||||||||| Sbjct: 2285 taccccttttgaccgtaaaaaaataggggcaccttgcatccttgaaccgataaccatttt 2344 Query: 82 tnggttaacctagcctcntccgtccntcngnaccaacanggggtagtncaggaatat 138 | | |||||||||||| ||||| | || | ||||||| | |||||| | ||||||| Sbjct: 2345 tctgctaacctagcctcctccgtacctcgggaccaacaagaggtagtactggaatat 2401
>gb|AC151709.9| Medicago truncatula clone mth2-31g22, complete sequence Length = 116699 Score = 63.9 bits (32), Expect = 1e-07 Identities = 81/99 (81%), Gaps = 1/99 (1%) Strand = Plus / Plus Query: 22 tacccntttttaccntgaaaaagcagggtn-accttgngtccttaaacctataaccattt 80 ||||| || ||||| ||||||| ||||| |||||| || ||| |||| |||||||| | Sbjct: 77449 taccccttcttaccctgaaaaaacagggggcaccttgtgttcttgaaccgataaccatct 77508 Query: 81 ttnggttaacctagcctcntccgtccntcngnaccaaca 119 || || |||||||||||| ||||||| || | ||||||| Sbjct: 77509 ttcggctaacctagcctcctccgtccctcgggaccaaca 77547
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 63.9 bits (32), Expect = 1e-07 Identities = 77/95 (81%) Strand = Plus / Minus Query: 52 accttgngtccttaaacctataaccatttttnggttaacctagcctcntccgtccntcng 111 |||||| ||||||||||| |||||||| ||| || ||||||| ||| ||||||| || | Sbjct: 5397 accttgcgtccttaaaccgataaccatctttcggctaacctaaccttctccgtccctcgg 5338 Query: 112 naccaacanggggtagtncaggaatatngacctgt 146 |||||| || |||| ||||||||| |||||| Sbjct: 5337 gaccaactaaggatagtacaggaatattcacctgt 5303
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 63.9 bits (32), Expect = 1e-07 Identities = 77/95 (81%) Strand = Plus / Minus Query: 52 accttgngtccttaaacctataaccatttttnggttaacctagcctcntccgtccntcng 111 |||||| ||||||||||| |||||||| ||| || ||||||| ||| ||||||| || | Sbjct: 1507 accttgcgtccttaaaccgataaccatctttcggctaacctaaccttctccgtccctcgg 1448 Query: 112 naccaacanggggtagtncaggaatatngacctgt 146 |||||| || |||| ||||||||| |||||| Sbjct: 1447 gaccaactaaggatagtacaggaatattcacctgt 1413
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 63.9 bits (32), Expect = 1e-07 Identities = 77/95 (81%) Strand = Plus / Plus Query: 52 accttgngtccttaaacctataaccatttttnggttaacctagcctcntccgtccntcng 111 |||||| ||||||||||| |||||||| ||| || ||||||| ||| ||||||| || | Sbjct: 149738 accttgcgtccttaaaccgataaccatctttcggctaacctaaccttctccgtccctcgg 149797 Query: 112 naccaacanggggtagtncaggaatatngacctgt 146 |||||| || |||| ||||||||| |||||| Sbjct: 149798 gaccaactaaggatagtacaggaatattcacctgt 149832 Score = 63.9 bits (32), Expect = 1e-07 Identities = 77/95 (81%) Strand = Plus / Minus Query: 52 accttgngtccttaaacctataaccatttttnggttaacctagcctcntccgtccntcng 111 |||||| ||||||||||| |||||||| ||| || ||||||| ||| ||||||| || | Sbjct: 118928 accttgcgtccttaaaccgataaccatctttcggctaacctaaccttctccgtccctcgg 118869 Query: 112 naccaacanggggtagtncaggaatatngacctgt 146 |||||| || |||| ||||||||| |||||| Sbjct: 118868 gaccaactaaggatagtacaggaatattcacctgt 118834
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 63.9 bits (32), Expect = 1e-07 Identities = 77/95 (81%) Strand = Plus / Minus Query: 52 accttgngtccttaaacctataaccatttttnggttaacctagcctcntccgtccntcng 111 |||||| ||||||||||| |||||||| ||| || ||||||| ||| ||||||| || | Sbjct: 1507 accttgcgtccttaaaccgataaccatctttcggctaacctaaccttctccgtccctcgg 1448 Query: 112 naccaacanggggtagtncaggaatatngacctgt 146 |||||| || |||| ||||||||| |||||| Sbjct: 1447 gaccaactaaggatagtacaggaatattcacctgt 1413
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 58.0 bits (29), Expect = 8e-06 Identities = 42/47 (89%) Strand = Plus / Minus Query: 60 tccttaaacctataaccatttttnggttaacctagcctcntccgtcc 106 ||||| ||||||||||||| ||| |||||||||||||| ||||||| Sbjct: 1497 tcctttaacctataaccatattttggttaacctagcctactccgtcc 1451
>emb|AL731620.2|OSJN00270 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0003A12, complete sequence Length = 164425 Score = 58.0 bits (29), Expect = 8e-06 Identities = 45/52 (86%) Strand = Plus / Minus Query: 66 aacctataaccatttttnggttaacctagcctcntccgtccntcngnaccaa 117 ||||||||||||| ||| || |||||||||||| ||||||| || | ||||| Sbjct: 87208 aacctataaccatcttttggctaacctagcctcctccgtccctccgtaccaa 87157
>emb|AL831802.5|CNS08CAF Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBa0083D13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104259 Score = 54.0 bits (27), Expect = 1e-04 Identities = 51/61 (83%) Strand = Plus / Minus Query: 1 ctcggttcgaggcnttttntttacccntttttaccntgaaaaagcagggtnaccttgngt 60 ||||| |||| || |||| | ||||| || ||||| |||||||||||||| |||||| || Sbjct: 15851 ctcggctcgatgcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 15792 Query: 61 c 61 | Sbjct: 15791 c 15791
>dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0577B11 Length = 180355 Score = 52.0 bits (26), Expect = 5e-04 Identities = 35/39 (89%) Strand = Plus / Plus Query: 31 ttaccntgaaaaagcagggtnaccttgngtccttaaacc 69 ||||| |||||||| ||||| |||||| ||||||||||| Sbjct: 58344 ttaccctgaaaaaggagggtcaccttgtgtccttaaacc 58382
>dbj|AP004635.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0672D01 Length = 146954 Score = 52.0 bits (26), Expect = 5e-04 Identities = 35/39 (89%) Strand = Plus / Plus Query: 31 ttaccntgaaaaagcagggtnaccttgngtccttaaacc 69 ||||| |||||||| ||||| |||||| ||||||||||| Sbjct: 135555 ttaccctgaaaaaggagggtcaccttgtgtccttaaacc 135593
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 46.1 bits (23), Expect = 0.029 Identities = 49/60 (81%) Strand = Plus / Plus Query: 87 taacctagcctcntccgtccntcngnaccaacanggggtagtncaggaatatngacctgt 146 ||||||||||| ||||||| || | |||| | |||||||| ||||||||| |||||| Sbjct: 51219 taacctagcctgctccgtccctcgggaccagcgaggggtagtacaggaatattcacctgt 51278 Score = 46.1 bits (23), Expect = 0.029 Identities = 49/60 (81%) Strand = Plus / Minus Query: 87 taacctagcctcntccgtccntcngnaccaacanggggtagtncaggaatatngacctgt 146 ||||||||||| ||||||| || | |||| | |||||||| ||||||||| |||||| Sbjct: 38609 taacctagcctgctccgtccctcgggaccagcgaggggtagtacaggaatattcacctgt 38550
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 46.1 bits (23), Expect = 0.029 Identities = 49/60 (81%) Strand = Plus / Minus Query: 87 taacctagcctcntccgtccntcngnaccaacanggggtagtncaggaatatngacctgt 146 ||||||||||| ||||||| || | |||| | |||||||| ||||||||| |||||| Sbjct: 5537 taacctagcctgctccgtccctcgggaccagcgaggggtagtacaggaatattcacctgt 5478
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 40.1 bits (20), Expect = 1.8 Identities = 35/39 (89%), Gaps = 1/39 (2%) Strand = Plus / Minus Query: 60 tccttaaacctataa-ccatttttnggttaacctagcct 97 ||||| ||||||||| |||| ||| |||||||||||||| Sbjct: 1464 tcctttaacctataaaccatattttggttaacctagcct 1426
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 40.1 bits (20), Expect = 1.8 Identities = 35/39 (89%), Gaps = 1/39 (2%) Strand = Plus / Minus Query: 60 tccttaaacctataa-ccatttttnggttaacctagcct 97 ||||| ||||||||| |||| ||| |||||||||||||| Sbjct: 1465 tcctttaacctataaaccatattttggttaacctagcct 1427
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 40.1 bits (20), Expect = 1.8 Identities = 35/39 (89%), Gaps = 1/39 (2%) Strand = Plus / Minus Query: 60 tccttaaacctataa-ccatttttnggttaacctagcct 97 ||||| ||||||||| |||| ||| |||||||||||||| Sbjct: 1465 tcctttaacctataaaccatattttggttaacctagcct 1427
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 40.1 bits (20), Expect = 1.8 Identities = 35/39 (89%), Gaps = 1/39 (2%) Strand = Plus / Minus Query: 60 tccttaaacctataa-ccatttttnggttaacctagcct 97 ||||| ||||||||| |||| ||| |||||||||||||| Sbjct: 1465 tcctttaacctataaaccatattttggttaacctagcct 1427
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 40.1 bits (20), Expect = 1.8 Identities = 35/39 (89%), Gaps = 1/39 (2%) Strand = Plus / Minus Query: 60 tccttaaacctataa-ccatttttnggttaacctagcct 97 ||||| ||||||||| |||| ||| |||||||||||||| Sbjct: 1465 tcctttaacctataaaccatattttggttaacctagcct 1427
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 40.1 bits (20), Expect = 1.8 Identities = 35/39 (89%), Gaps = 1/39 (2%) Strand = Plus / Minus Query: 60 tccttaaacctataa-ccatttttnggttaacctagcct 97 ||||| ||||||||| |||| ||| |||||||||||||| Sbjct: 1465 tcctttaacctataaaccatattttggttaacctagcct 1427
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 40.1 bits (20), Expect = 1.8 Identities = 35/39 (89%), Gaps = 1/39 (2%) Strand = Plus / Minus Query: 60 tccttaaacctataa-ccatttttnggttaacctagcct 97 ||||| ||||||||| |||| ||| |||||||||||||| Sbjct: 1464 tcctttaacctataaaccatattttggttaacctagcct 1426
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 40.1 bits (20), Expect = 1.8 Identities = 35/39 (89%), Gaps = 1/39 (2%) Strand = Plus / Minus Query: 60 tccttaaacctataa-ccatttttnggttaacctagcct 97 ||||| ||||||||| |||| ||| |||||||||||||| Sbjct: 1465 tcctttaacctataaaccatattttggttaacctagcct 1427
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 40.1 bits (20), Expect = 1.8 Identities = 35/39 (89%), Gaps = 1/39 (2%) Strand = Plus / Minus Query: 60 tccttaaacctataa-ccatttttnggttaacctagcct 97 ||||| ||||||||| |||| ||| |||||||||||||| Sbjct: 1465 tcctttaacctataaaccatattttggttaacctagcct 1427
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 40.1 bits (20), Expect = 1.8 Identities = 35/39 (89%), Gaps = 1/39 (2%) Strand = Plus / Minus Query: 60 tccttaaacctataa-ccatttttnggttaacctagcct 97 ||||| ||||||||| |||| ||| |||||||||||||| Sbjct: 1464 tcctttaacctataaaccatattttggttaacctagcct 1426
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 40.1 bits (20), Expect = 1.8 Identities = 35/39 (89%), Gaps = 1/39 (2%) Strand = Plus / Minus Query: 60 tccttaaacctataa-ccatttttnggttaacctagcct 97 ||||| ||||||||| |||| ||| |||||||||||||| Sbjct: 1465 tcctttaacctataaaccatattttggttaacctagcct 1427
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 40.1 bits (20), Expect = 1.8 Identities = 35/39 (89%), Gaps = 1/39 (2%) Strand = Plus / Minus Query: 60 tccttaaacctataa-ccatttttnggttaacctagcct 97 ||||| ||||||||| |||| ||| |||||||||||||| Sbjct: 1465 tcctttaacctataaaccatattttggttaacctagcct 1427
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 40.1 bits (20), Expect = 1.8 Identities = 35/39 (89%), Gaps = 1/39 (2%) Strand = Plus / Minus Query: 60 tccttaaacctataa-ccatttttnggttaacctagcct 97 ||||| ||||||||| |||| ||| |||||||||||||| Sbjct: 1465 tcctttaacctataaaccatattttggttaacctagcct 1427
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 40.1 bits (20), Expect = 1.8 Identities = 35/39 (89%), Gaps = 1/39 (2%) Strand = Plus / Minus Query: 60 tccttaaacctataa-ccatttttnggttaacctagcct 97 ||||| ||||||||| |||| ||| |||||||||||||| Sbjct: 1465 tcctttaacctataaaccatattttggttaacctagcct 1427
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 40.1 bits (20), Expect = 1.8 Identities = 35/39 (89%), Gaps = 1/39 (2%) Strand = Plus / Minus Query: 60 tccttaaacctataa-ccatttttnggttaacctagcct 97 ||||| ||||||||| |||| ||| |||||||||||||| Sbjct: 1465 tcctttaacctataaaccatattttggttaacctagcct 1427
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 40.1 bits (20), Expect = 1.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 76 catttttnggttaacctagcctc 98 ||||||| ||||||||||||||| Sbjct: 1500 cattttttggttaacctagcctc 1478
>emb|AL513479.12| Human DNA sequence from clone RP11-329N22 on chromosome 1, complete sequence Length = 193826 Score = 38.2 bits (19), Expect = 7.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 64 taaacctataaccattttt 82 ||||||||||||||||||| Sbjct: 126845 taaacctataaccattttt 126827
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 38.2 bits (19), Expect = 7.1 Identities = 32/37 (86%) Strand = Plus / Minus Query: 66 aacctataaccatttttnggttaacctagcctcntcc 102 |||| |||||||| ||| || |||||||||||| ||| Sbjct: 393104 aaccgataaccatctttcggctaacctagcctcctcc 393068
>gb|U73031.1|NSU73031 Nicotiana sylvestris mitochondrial sequence Length = 1799 Score = 38.2 bits (19), Expect = 7.1 Identities = 32/37 (86%) Strand = Plus / Plus Query: 66 aacctataaccatttttnggttaacctagcctcntcc 102 |||| |||||||| ||| || |||||||||||| ||| Sbjct: 1315 aaccgataaccatctttcggctaacctagcctcctcc 1351 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 225,077 Number of Sequences: 3902068 Number of extensions: 225077 Number of successful extensions: 10272 Number of sequences better than 10.0: 132 Number of HSP's better than 10.0 without gapping: 124 Number of HSP's successfully gapped in prelim test: 15 Number of HSP's that attempted gapping in prelim test: 10056 Number of HSP's gapped (non-prelim): 231 length of query: 148 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 127 effective length of database: 17,151,101,840 effective search space: 2178189933680 effective search space used: 2178189933680 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
