>CRBN_RAT (Q56AP7) Protein cereblon|
          Length = 445

 Score = 55.8 bits (133), Expect = 7e-08
 Identities = 26/57 (45%), Positives = 32/57 (56%)
 Frame = -3

Query: 529 ITVHNTSGLALNGNPSDAHSLFPGYTWTVALCAACESHIGLAVQG*QKEPSSEILLG 359
           +TV+  S L L G PS  HS FPGY WT+A C  C SHIG      +K+ S +   G
Sbjct: 363 LTVYKASNLNLIGRPSTVHSWFPGYAWTIAQCKICASHIGWKFTATKKDMSPQKFWG 419



 Score = 29.3 bits (64), Expect = 7.1
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -1

Query: 411 GWLFRADKRNLLPKSFWGI 355
           GW F A K+++ P+ FWG+
Sbjct: 402 GWKFTATKKDMSPQKFWGL 420

>CRBN_MOUSE (Q8C7D2) Protein cereblon (Protein PiL)|
          Length = 445

 Score = 55.8 bits (133), Expect = 7e-08
 Identities = 26/57 (45%), Positives = 32/57 (56%)
 Frame = -3

Query: 529 ITVHNTSGLALNGNPSDAHSLFPGYTWTVALCAACESHIGLAVQG*QKEPSSEILLG 359
           +TV+  S L L G PS  HS FPGY WT+A C  C SHIG      +K+ S +   G
Sbjct: 363 LTVYKASNLNLIGRPSTVHSWFPGYAWTIAQCKICASHIGWKFTATKKDMSPQKFWG 419



 Score = 29.3 bits (64), Expect = 7.1
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -1

Query: 411 GWLFRADKRNLLPKSFWGI 355
           GW F A K+++ P+ FWG+
Sbjct: 402 GWKFTATKKDMSPQKFWGL 420

>CRBN_PONPY (Q5R6Y2) Protein cereblon|
          Length = 429

 Score = 53.9 bits (128), Expect = 3e-07
 Identities = 26/57 (45%), Positives = 31/57 (54%)
 Frame = -3

Query: 529 ITVHNTSGLALNGNPSDAHSLFPGYTWTVALCAACESHIGLAVQG*QKEPSSEILLG 359
           +TV+    L L G PS  HS FPGY WTVA C  C SHIG      +K+ S +   G
Sbjct: 347 LTVYKACNLNLIGRPSTEHSWFPGYAWTVAQCKICASHIGWKFTATKKDMSPQKFWG 403



 Score = 29.3 bits (64), Expect = 7.1
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -1

Query: 411 GWLFRADKRNLLPKSFWGI 355
           GW F A K+++ P+ FWG+
Sbjct: 386 GWKFTATKKDMSPQKFWGL 404

>CRBN_HUMAN (Q96SW2) Protein cereblon|
          Length = 442

 Score = 53.9 bits (128), Expect = 3e-07
 Identities = 26/57 (45%), Positives = 31/57 (54%)
 Frame = -3

Query: 529 ITVHNTSGLALNGNPSDAHSLFPGYTWTVALCAACESHIGLAVQG*QKEPSSEILLG 359
           +TV+    L L G PS  HS FPGY WTVA C  C SHIG      +K+ S +   G
Sbjct: 360 LTVYKACNLNLIGRPSTEHSWFPGYAWTVAQCKICASHIGWKFTATKKDMSPQKFWG 416



 Score = 29.3 bits (64), Expect = 7.1
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -1

Query: 411 GWLFRADKRNLLPKSFWGI 355
           GW F A K+++ P+ FWG+
Sbjct: 399 GWKFTATKKDMSPQKFWGL 417

>CRBN_XENTR (Q640S2) Protein cereblon|
          Length = 447

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 22/57 (38%), Positives = 32/57 (56%)
 Frame = -3

Query: 529 ITVHNTSGLALNGNPSDAHSLFPGYTWTVALCAACESHIGLAVQG*QKEPSSEILLG 359
           +TV+    L+L G PS  +S FPG+ WT+A C  C SH+G      +K+ S +   G
Sbjct: 363 LTVYKAFNLSLVGRPSTENSWFPGFAWTIAQCRVCGSHMGWKFTAVRKDLSPQKFWG 419

>SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1|
          Length = 917

 Score = 32.3 bits (72), Expect = 0.83
 Identities = 30/122 (24%), Positives = 48/122 (39%), Gaps = 7/122 (5%)
 Frame = +2

Query: 131  SGNTR*NRQAKSSMVYNEQETVGPNPARSTTSRPPKIGHGSAEG*RESRQEPRPLPYTER 310
            S  +R  R+A+S    N++ +  P P    TS PP +  G++    + RQ P P     R
Sbjct: 678  SSPSRSTREARSPQP-NKRHSPSPRPRAPQTSSPPPVRRGASSS-PQRRQSPSPSTRPIR 735

Query: 311  RS*ADCVPSEVWEMRIPQKDFGRRFLLS-ALNSQPDVGL------AGSTQRNRPRISWEQ 469
            R      P ++ +   P     RR   S +++  P+             Q   P  +W  
Sbjct: 736  RVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPTSPVQSQSPSTNWSP 795

Query: 470  AV 475
            AV
Sbjct: 796  AV 797

>VIV_ORYSA (P37398) Protein viviparous homolog|
          Length = 728

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
 Frame = +2

Query: 200 PNPARSTTSRPPKIGHGSAEG*RESRQEPRPLPYTERRS*ADCVP-SEVWEMRIPQKDFG 376
           PNP  +T+ +P           + S ++P+P P     + A+ +  S   E R  + D  
Sbjct: 484 PNPPPATSKQP-----------KPSPEKPKPKPQAAATAGAESLQRSTASEKRQAKTDKN 532

Query: 377 RRFLLSALNSQPDVGLAG 430
            RFLL  +  Q DVG  G
Sbjct: 533 LRFLLQKVLKQSDVGSLG 550

>DEOC_STRMU (Q8DU34) Deoxyribose-phosphate aldolase (EC 4.1.2.4)|
           (Phosphodeoxyriboaldolase) (Deoxyriboaldolase) (DERA)
          Length = 220

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 22/66 (33%), Positives = 35/66 (53%)
 Frame = +1

Query: 145 MKPSGQIQHGLQRAGNRRAKSSKVYNEQATEDRSRVC*RMTRIAPRTAAAALHGTSVLSR 324
           MK +  I H L +  +R+ +  K+  E  T + + VC   T ++   AA AL GT +  +
Sbjct: 1   MKINQYIDHTLLKPESRQDQIDKLIREAKTYNFASVCINPTWVS--YAAKALEGTDI--K 56

Query: 325 LCTV*G 342
           +CTV G
Sbjct: 57  VCTVIG 62

>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1 (Ser/Arg-related|
            nuclear matrix protein) (SR-related nuclear matrix
            protein of 160 kDa) (SRm160)
          Length = 904

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 31/123 (25%), Positives = 50/123 (40%), Gaps = 8/123 (6%)
 Frame = +2

Query: 131  SGNTR*NRQAKSSMVYNEQETVGPNP-ARSTTSRPPKIGHGSAEG*RESRQEPRPLPYTE 307
            S  +R  R+A+S    N++ +  P P A  T+S PP +  G++    + RQ P P     
Sbjct: 664  SSPSRSTREARSPQP-NKRHSPSPRPRAPQTSSSPPPVRRGASSS-PQRRQSPSPSTRPI 721

Query: 308  RRS*ADCVPSEVWEMRIPQKDFGRRFLLS-ALNSQPDVGL------AGSTQRNRPRISWE 466
            RR      P ++ +   P     RR   S +++  P+             Q   P  +W 
Sbjct: 722  RRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPPSPVQSQSPSTNWS 781

Query: 467  QAV 475
             AV
Sbjct: 782  PAV 784

>VGLB_MCMVS (P27171) Glycoprotein B precursor|
          Length = 928

 Score = 29.3 bits (64), Expect = 7.1
 Identities = 18/54 (33%), Positives = 28/54 (51%)
 Frame = +3

Query: 141 LDETVRPNPAWSTTSRKPSGQIQQGLQRAGHRR*VTGLLKDDENRAKNRGRCLT 302
           LDE  R N  +S  SR  +G++        +R   T +L +D+ R+KN  R +T
Sbjct: 191 LDEVNRNNRCYSAASRILNGEVYVAYHEDSYRN-YTMVLVEDDYRSKNSKRYVT 243

>PALF_YEAST (P53179) pH-response regulator protein palF/RIM8 (Regulator of IME2|
           protein 8)
          Length = 542

 Score = 29.3 bits (64), Expect = 7.1
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +1

Query: 307 TSVLSRLCTV*GLGNADPPEGFRKKV 384
           T+ L R+C V G G  DP E FRK +
Sbjct: 299 TTTLVRICRVGGAGKDDPMETFRKDI 324

>FZD10_CHICK (Q9PWH2) Frizzled 10 precursor (Frizzled-10) (Fz-10) (cFz-10)|
          Length = 585

 Score = 28.9 bits (63), Expect = 9.2
 Identities = 18/61 (29%), Positives = 25/61 (40%)
 Frame = +1

Query: 346 GNADPPEGFRKKVPFVSPEQPARCGTRRQHTAQPSTYILGTSCEHQKDCH*ARAQTCCAL 525
           G+ +PP G     P   P++P+     +QH    S     TSCE+    H       CA 
Sbjct: 158 GSDEPPRGSSMLPPMFRPQRPSTGHDLQQHKDSLSR----TSCENPGKFHHVEKSASCAP 213

Query: 526 L 528
           L
Sbjct: 214 L 214


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,952,980
Number of Sequences: 219361
Number of extensions: 1830826
Number of successful extensions: 4633
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4628
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4085413911
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)