ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd16m09 |
|---|---|
| Clone Library Name | barley_pub |
>CAHC_HORVU (P40880) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)| (Carbonate dehydratase) Length = 324 Score = 251 bits (642), Expect = 1e-66 Identities = 122/122 (100%), Positives = 122/122 (100%) Frame = -3 Query: 627 GVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDWVRIGFPAKKKV 448 GVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDWVRIGFPAKKKV Sbjct: 203 GVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDWVRIGFPAKKKV 262 Query: 447 QTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFETW 268 QTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFETW Sbjct: 263 QTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFETW 322 Query: 267 EQ 262 EQ Sbjct: 323 EQ 324
>CAHC_TOBAC (P27141) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)| (Carbonate dehydratase) Length = 321 Score = 160 bits (406), Expect = 2e-39 Identities = 82/124 (66%), Positives = 90/124 (72%) Frame = -3 Query: 639 TSTPGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDWVRIGFPA 460 T GVG+AIEYAV LKVE IVVIGHS CGGIK L+SL +S F+EDWV+IG PA Sbjct: 186 TRYSGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSLPADGSESTAFIEDWVKIGLPA 245 Query: 459 KKKVQTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGK 280 K KVQ E F DQCT EKEAVNVSL NLLTYPFV+EG+ TL L GGHYDFV+G Sbjct: 246 KAKVQGEHVDKCFADQCTACEKEAVNVSLGNLLTYPFVREGLVKKTLALKGGHYDFVNGG 305 Query: 279 FETW 268 FE W Sbjct: 306 FELW 309
>CAH2_ARATH (P42737) Carbonic anhydrase 2 (EC 4.2.1.1) (Carbonate dehydratase| 2) Length = 259 Score = 157 bits (398), Expect = 2e-38 Identities = 79/121 (65%), Positives = 90/121 (74%) Frame = -3 Query: 627 GVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDWVRIGFPAKKKV 448 GVG+AIEYAV LKVE IVVIGHS CGGIK L+S ++S F+EDWV+I PAK KV Sbjct: 128 GVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPLDGNNSTDFIEDWVKICLPAKSKV 187 Query: 447 QTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFETW 268 E S F+DQC E+EAVNVSL NLLTYPFV+EGV GTL L GG+YDFV+G FE W Sbjct: 188 LAESESSAFEDQCGRCEREAVNVSLANLLTYPFVREGVVKGTLALKGGYYDFVNGSFELW 247 Query: 267 E 265 E Sbjct: 248 E 248
>CAHX_FLAPR (P46281) Carbonic anhydrase (EC 4.2.1.1) (Carbonate dehydratase)| Length = 329 Score = 154 bits (390), Expect = 2e-37 Identities = 75/124 (60%), Positives = 88/124 (70%) Frame = -3 Query: 639 TSTPGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDWVRIGFPA 460 T GVG+A+EYAV LKV+ I VIGHSRCGGIK L++ D S F+EDWV++ PA Sbjct: 194 TKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPA 253 Query: 459 KKKVQTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGK 280 K KV E DDQC + EKEAVNVSL NLLTYPFV++G+ N TL L GGHYDFV+G Sbjct: 254 KSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNNTLALKGGHYDFVNGT 313 Query: 279 FETW 268 FE W Sbjct: 314 FELW 317
>CAHX_FLABR (P46511) Carbonic anhydrase (EC 4.2.1.1) (Carbonate dehydratase)| Length = 330 Score = 154 bits (390), Expect = 2e-37 Identities = 75/124 (60%), Positives = 88/124 (70%) Frame = -3 Query: 639 TSTPGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDWVRIGFPA 460 T GVG+A+EYAV LKV+ I VIGHSRCGGIK L++ D S F+EDWV++ PA Sbjct: 195 TKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPA 254 Query: 459 KKKVQTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGK 280 K KV E DDQC + EKEAVNVSL NLLTYPFV++G+ N TL L GGHYDFV+G Sbjct: 255 KSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNNTLALKGGHYDFVNGT 314 Query: 279 FETW 268 FE W Sbjct: 315 FELW 318
>CAHX_FLABI (P46510) Carbonic anhydrase (EC 4.2.1.1) (Carbonate dehydratase)| Length = 330 Score = 154 bits (388), Expect = 3e-37 Identities = 75/124 (60%), Positives = 88/124 (70%) Frame = -3 Query: 639 TSTPGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDWVRIGFPA 460 T GVG+A+EYAV LKV+ I VIGHSRCGGIK L++ D S F+EDWV++ PA Sbjct: 195 TKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPA 254 Query: 459 KKKVQTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGK 280 K KV E DDQC + EKEAVNVSL NLLTYPFV++G+ N TL L GGHYDFV+G Sbjct: 255 KSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNKTLALKGGHYDFVNGT 314 Query: 279 FETW 268 FE W Sbjct: 315 FELW 318
>CAH1_FLALI (P46512) Carbonic anhydrase 1 (EC 4.2.1.1) (Carbonate dehydratase| 1) Length = 330 Score = 153 bits (387), Expect = 4e-37 Identities = 75/124 (60%), Positives = 87/124 (70%) Frame = -3 Query: 639 TSTPGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDWVRIGFPA 460 T GVG+A+EYAV LKV+ I VIGHSRCGGIK L++ D S F+EDWV++ PA Sbjct: 195 TKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPA 254 Query: 459 KKKVQTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGK 280 K KV E DDQC EKEAVNVSL NLLTYPFV++G+ N TL L GGHYDFV+G Sbjct: 255 KSKVVAEHNGTHLDDQCVQCEKEAVNVSLGNLLTYPFVRDGLRNNTLALKGGHYDFVNGT 314 Query: 279 FETW 268 FE W Sbjct: 315 FELW 318
>CAHC_ARATH (P27140) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)| (Carbonate dehydratase) Length = 347 Score = 152 bits (385), Expect = 6e-37 Identities = 76/120 (63%), Positives = 88/120 (73%) Frame = -3 Query: 627 GVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDWVRIGFPAKKKV 448 GVG+AIEYAV LKVE IVVIGHS CGGIK L+S ++S F+EDWV+I PAK KV Sbjct: 205 GVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPLDGNNSTDFIEDWVKICLPAKSKV 264 Query: 447 QTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFETW 268 +E F+DQC E+EAVNVSL NLLTYPFV+EG+ GTL L GG+YDFV G FE W Sbjct: 265 ISELGDSAFEDQCGRCEREAVNVSLANLLTYPFVREGLVKGTLALKGGYYDFVKGAFELW 324
>CAHC_SPIOL (P16016) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)| (Carbonate dehydratase) Length = 319 Score = 150 bits (379), Expect = 3e-36 Identities = 75/120 (62%), Positives = 87/120 (72%) Frame = -3 Query: 627 GVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDWVRIGFPAKKKV 448 GVG+AIEYAV LKVE IVVIGHS CGGIK L+S D + F+EDWV+I PAK KV Sbjct: 188 GVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPDAGPTTTDFIEDWVKICLPAKHKV 247 Query: 447 QTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFETW 268 E + F +QCT EKEAVNVSL NLLTYPFV++G+ TL L GG+YDFV+G FE W Sbjct: 248 LAEHGNATFAEQCTHCEKEAVNVSLGNLLTYPFVRDGLVKKTLALQGGYYDFVNGSFELW 307
>CAH2_FLALI (P46513) Carbonic anhydrase 2 (EC 4.2.1.1) (Carbonate dehydratase| 2) (Fragment) Length = 190 Score = 149 bits (376), Expect = 7e-36 Identities = 71/120 (59%), Positives = 86/120 (71%) Frame = -3 Query: 627 GVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDWVRIGFPAKKKV 448 G G+AIEYAV LKVE IVVIGHS CGGIK L+S+ D + F+E WV++G PAK KV Sbjct: 59 GAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDDGTPASDFIEQWVKLGLPAKSKV 118 Query: 447 QTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFETW 268 + C ++ F D CT EKEAVNVSL NLLTYPFV++ + N L L G HYDFV+G F+ W Sbjct: 119 KANCNNLEFADLCTKCEKEAVNVSLGNLLTYPFVRDALVNKKLSLKGAHYDFVNGAFDLW 178
>CAHC_PEA (P17067) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)| (Carbonate dehydratase) [Contains: Carbonic anhydrase, 27 kDa isoform; Carbonic anhydrase, 25 kDa isoform] Length = 328 Score = 147 bits (372), Expect = 2e-35 Identities = 74/120 (61%), Positives = 84/120 (70%) Frame = -3 Query: 627 GVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDWVRIGFPAKKKV 448 G G+AIEYAV LKV IVVIGHS CGGIK LLS S F+E+WV+IG PAK KV Sbjct: 197 GTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGTYSTDFIEEWVKIGLPAKAKV 256 Query: 447 QTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFETW 268 + + PF + CT EKEAVN SL NLLTYPFV+EG+ N TL L GG+YDFV G FE W Sbjct: 257 KAQHGDAPFAELCTHCEKEAVNASLGNLLTYPFVREGLVNKTLALKGGYYDFVKGSFELW 316
>CYNT_SYNP7 (P27134) Carbonic anhydrase (EC 4.2.1.1)| Length = 272 Score = 77.4 bits (189), Expect = 3e-14 Identities = 42/116 (36%), Positives = 63/116 (54%) Frame = -3 Query: 627 GVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDWVRIGFPAKKKV 448 G G++IEYA+ AL +E +VV GHS CG +K LL L +D V DW++ ++ V Sbjct: 76 GEGASIEYAIAALNIEHVVVCGHSHCGAMKGLLKLNQLQED-MPLVYDWLQHAQATRRLV 134 Query: 447 QTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGK 280 + DD +L E V ++NL TYP V+ + G L++ G Y+ SG+ Sbjct: 135 LDNYSGYETDDLVEILVAENVLTQIENLKTYPIVRSRLFQGKLQIFGWIYEVESGE 190
>CYNT_SYNY3 (Q54735) Carbonic anhydrase (EC 4.2.1.1)| Length = 274 Score = 66.2 bits (160), Expect = 8e-11 Identities = 38/116 (32%), Positives = 59/116 (50%) Frame = -3 Query: 627 GVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDWVRIGFPAKKKV 448 G G+A+EYA+ AL++ I+V GHS CG +K LL L + + V DW++ ++ V Sbjct: 76 GEGAAMEYALVALEINQIIVCGHSHCGAMKGLLKL-NSLQEKLPLVYDWLKHTEATRRLV 134 Query: 447 QTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGK 280 + + +D V E + L+NL TYP + + G L L G Y G+ Sbjct: 135 LDNYSHLEGEDLIEVAVAENILTQLKNLQTYPAIHSRLHRGDLSLHGWIYRIEEGE 190
>CYNT_ECOLI (P0ABE9) Carbonic anhydrase 1 (EC 4.2.1.1)| Length = 219 Score = 61.6 bits (148), Expect = 2e-09 Identities = 39/121 (32%), Positives = 58/121 (47%) Frame = -3 Query: 627 GVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDWVRIGFPAKKKV 448 GV +++EYAV AL+V IV+ GHS CG + A+ S + D V W+R A + V Sbjct: 76 GVSASVEYAVAALRVSDIVICGHSNCGAMTAIASCQ--CMDHMPAVSHWLRYADSA-RVV 132 Query: 447 QTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFETW 268 + + +E V L NL T+P V+ + G + L G YD SG + Sbjct: 133 NEARPHSDLPSKAAAMVRENVIAQLANLQTHPSVRLALEEGRIALHGWVYDIESGSIAAF 192 Query: 267 E 265 + Sbjct: 193 D 193
>CYNT_ECO57 (P0ABF0) Carbonic anhydrase 1 (EC 4.2.1.1)| Length = 219 Score = 61.6 bits (148), Expect = 2e-09 Identities = 39/121 (32%), Positives = 58/121 (47%) Frame = -3 Query: 627 GVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDWVRIGFPAKKKV 448 GV +++EYAV AL+V IV+ GHS CG + A+ S + D V W+R A + V Sbjct: 76 GVSASVEYAVAALRVSDIVICGHSNCGAMTAIASCQ--CMDHMPAVSHWLRYADSA-RVV 132 Query: 447 QTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGKFETW 268 + + +E V L NL T+P V+ + G + L G YD SG + Sbjct: 133 NEARPHSDLPSKAAAMVRENVIAQLANLQTHPSVRLALEEGRIALHGWVYDIESGSIAAF 192 Query: 267 E 265 + Sbjct: 193 D 193
>CYNT_HELPJ (Q9ZN54) Carbonic anhydrase (EC 4.2.1.1)| Length = 221 Score = 58.9 bits (141), Expect = 1e-08 Identities = 31/115 (26%), Positives = 63/115 (54%), Gaps = 2/115 (1%) Frame = -3 Query: 618 SAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGADDS-FHFVEDWVRIGFPAKKKVQT 442 +++EYA+ + V+ +++ GHS CG ++ + D + ++ +W++ P K++++ Sbjct: 80 ASVEYAIAHVGVQNLIICGHSDCGACGSIHLIHDETTKAKTPYIANWIQFLEPIKEELKN 139 Query: 441 ECA-SMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGK 280 S F + + E+ + L NLL+Y F++E V N LK+ G HY +G+ Sbjct: 140 HPQFSNHFAKRSWLTERLNARLQLNNLLSYDFIQERVINNELKIFGWHYIIETGR 194
>CYNT_HELPY (O24855) Carbonic anhydrase 1 (EC 4.2.1.1)| Length = 221 Score = 56.2 bits (134), Expect = 8e-08 Identities = 30/115 (26%), Positives = 62/115 (53%), Gaps = 2/115 (1%) Frame = -3 Query: 618 SAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGADDS-FHFVEDWVRIGFPAKKKVQT 442 ++IEYA+ + V+ +++ GHS CG ++ + D + ++ +W++ P K++++ Sbjct: 80 ASIEYAIAHVGVQNLIICGHSDCGACGSVHLIHDETTKAKTPYIANWIQFLEPVKEELKN 139 Query: 441 ECA-SMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVSGK 280 S F + + E+ + L NLL+Y F++E + LK+ G HY +G+ Sbjct: 140 HPQFSNHFAKRSWLTERLNARLQLNNLLSYDFIQEKASKNELKIFGWHYIIETGR 194
>CAN_HAEIN (P45148) Carbonic anhydrase 2 (EC 4.2.1.1)| Length = 229 Score = 42.7 bits (99), Expect = 0.001 Identities = 38/116 (32%), Positives = 53/116 (45%), Gaps = 4/116 (3%) Frame = -3 Query: 618 SAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKD-GADDSF--HFVEDWVRIGFPAKKKV 448 S ++YAV LK+E I++ GH+ CGGI A ++ KD G +++ H + W + G K Sbjct: 79 SVVQYAVDVLKIEHIIICGHTNCGGIHAAMADKDLGLINNWLLHIRDIWFKHGHLLGKLS 138 Query: 447 QTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNG-TLKLVGGHYDFVSG 283 + A M L K V + NL VK G L L G YD G Sbjct: 139 PEKRADM--------LTKINVAEQVYNLGRTSIVKSAWERGQKLSLHGWVYDVNDG 186
>NCE3_YEAST (P53615) Non-classical export protein 3| Length = 221 Score = 40.8 bits (94), Expect = 0.003 Identities = 31/125 (24%), Positives = 57/125 (45%), Gaps = 9/125 (7%) Frame = -3 Query: 618 SAIEYAVCALKVEVIVVIGHSRCGGIKALLS------LKDGADDSFHFVEDWVRIGFPAK 457 + +E+A+ LKV +++ GH+ CGGIK L+ K + +++D + Sbjct: 93 ATLEFAIICLKVNKVIICGHTDCGGIKTCLTNQREALPKVNCSHLYKYLDDIDTMYHEES 152 Query: 456 KK---VQTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLKLVGGHYDFVS 286 + ++T+ + C V K N ++N P V+ V NG L++ G Y+ Sbjct: 153 QNLIHLKTQREKSHYLSHCNV--KRQFNRIIEN----PTVQTAVQNGELQVYGLLYNVED 206 Query: 285 GKFET 271 G +T Sbjct: 207 GLLQT 211
>CAN_SHIFL (P61518) Carbonic anhydrase 2 (EC 4.2.1.1)| Length = 220 Score = 35.4 bits (80), Expect = 0.14 Identities = 14/28 (50%), Positives = 21/28 (75%) Frame = -3 Query: 618 SAIEYAVCALKVEVIVVIGHSRCGGIKA 535 S ++YAV L+VE I++ GH CGG++A Sbjct: 79 SVVQYAVDVLEVEHIIICGHYGCGGVQA 106
>CAN_ECOLI (P61517) Carbonic anhydrase 2 (EC 4.2.1.1)| Length = 220 Score = 35.4 bits (80), Expect = 0.14 Identities = 14/28 (50%), Positives = 21/28 (75%) Frame = -3 Query: 618 SAIEYAVCALKVEVIVVIGHSRCGGIKA 535 S ++YAV L+VE I++ GH CGG++A Sbjct: 79 SVVQYAVDVLEVEHIIICGHYGCGGVQA 106
>ACCD_PICAB (O47039) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| beta (EC 6.4.1.2) (ACCase beta chain) Length = 319 Score = 34.7 bits (78), Expect = 0.25 Identities = 19/65 (29%), Positives = 34/65 (52%) Frame = +1 Query: 181 ALHSHRSDDILIYVRLYMSELTGGEDLLLPCFELAGDEVVVAADELEGSVGHTLLDERVG 360 AL+ + D+ L+YV + S TGG + F + GD ++ G ++D+ +G Sbjct: 220 ALYIPQKDNRLLYVSILTSPTTGG---VTASFGMLGDIIIAEPKAYIAFAGKIVIDQTLG 276 Query: 361 QEVLE 375 Q+V+E Sbjct: 277 QKVIE 281
>ACCD_PINTH (P52769) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| beta (EC 6.4.1.2) (ACCase beta chain) Length = 321 Score = 34.3 bits (77), Expect = 0.32 Identities = 17/65 (26%), Positives = 34/65 (52%) Frame = +1 Query: 181 ALHSHRSDDILIYVRLYMSELTGGEDLLLPCFELAGDEVVVAADELEGSVGHTLLDERVG 360 AL+ H+ + L+Y+ + S TGG + F + GD ++ G ++++ +G Sbjct: 220 ALYIHQKEKKLLYISILTSPTTGG---VTASFGMLGDIIIAEPKAYIAFAGKRVIEQTLG 276 Query: 361 QEVLE 375 Q+V+E Sbjct: 277 QKVIE 281
>YC47_SCHPO (O14053) Hypothetical WD-repeat protein C1672.07 in chromosome III| Length = 902 Score = 30.0 bits (66), Expect = 6.0 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 4/52 (7%) Frame = +2 Query: 308 PTSLRVPLVTPSLTNG*VKRFWRDTLTA----SFSRTVHWSSKGMEAHSVCT 451 P L++P +T ++ +++W + LTA S +RT +W SK + H + T Sbjct: 390 PEELKLPEITALSSSNTREKYWDNVLTAHKNDSSARTWNWKSKTLGQHVLPT 441
>EF2_METKA (Q8TXJ4) Elongation factor 2 (EF-2) [Contains: Mka fusA intein]| Length = 1257 Score = 30.0 bits (66), Expect = 6.0 Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 20/98 (20%) Frame = +1 Query: 187 HSHRSDDILIYVRLYMSELTGGEDLLLPCFELAGDEVVVAADELEGSVGHT-------LL 345 H+ ++ +++ +L G ++ ELAGD++V+ DE+E G T ++ Sbjct: 545 HNFAAEGFVVHNTTLSDQLLAGAGMISE--ELAGDQLVLDFDEMEQERGITIDAANVSMV 602 Query: 346 DERVGQEVL------EGHVD-------GLLLQDGALVI 420 E G+E L GHVD + DGA+V+ Sbjct: 603 HEYEGEEYLINLIDTPGHVDFSGDVTRAMRAVDGAIVV 640
>PYRC_METKA (Q8TXX9) Dihydroorotase (EC 3.5.2.3) (DHOase)| Length = 426 Score = 30.0 bits (66), Expect = 6.0 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = -2 Query: 196 DVNAMPWECVPVIVQYWMPDGPM*ICHKQ 110 D A+PW +P I + PDGP+ I H + Sbjct: 154 DAPAVPWSTLPEIFRELSPDGPLTIFHPE 182
>PHP_DROME (P39769) Polyhomeotic-proximal chromatin protein| Length = 1589 Score = 30.0 bits (66), Expect = 6.0 Identities = 27/103 (26%), Positives = 45/103 (43%) Frame = +2 Query: 308 PTSLRVPLVTPSLTNG*VKRFWRDTLTASFSRTVHWSSKGMEAHSVCTFFLAGNPILTQS 487 PT+ VP+ +P +DT T S T S +EA S L+ +S Sbjct: 1136 PTATLVPIGSPKTPVS-----GKDTCTTPKSSTPATVSASVEASSSTGEALSNGDASDRS 1190 Query: 488 STKWKESSAPSLSESRALIPPQRLWPITTMTSTLSAQTAYSMA 616 ST K ++ P+ +S A + P P +T +++S + +A Sbjct: 1191 STPSKGATTPTSKQSNAAVQP----PSSTTPNSVSGKEEPKLA 1229
>CPXM2_HUMAN (Q8N436) Carboxypeptidase-like protein X2 precursor| Length = 756 Score = 29.6 bits (65), Expect = 7.9 Identities = 12/47 (25%), Positives = 24/47 (51%) Frame = +2 Query: 59 HSSTIPRQXNGEEKKVLLLMANSHRAIRHPVLDNNGYALPWHCIHID 199 H S +P + + +++ M HR I+ V D++G +P I ++ Sbjct: 618 HESQLPEEWENNRESLIVFMEQVHRGIKGLVRDSHGKGIPNAIISVE 664
>REPM_STAAU (P14490) Replication initiation protein| Length = 314 Score = 29.6 bits (65), Expect = 7.9 Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 4/63 (6%) Frame = +2 Query: 392 SFSRTVHWSSKGMEAHSVCTFFLAGNPILTQSST----KWKESSAPSLSESRALIPPQRL 559 +FS+T + +S+ ++AH VCT NP L+ + ++SA LS+ +L P RL Sbjct: 20 NFSKTGYSNSR-LDAHFVCT----SNPKLSFDAMTIVGNLNKNSAKKLSDFMSLDPQIRL 74 Query: 560 WPI 568 W I Sbjct: 75 WDI 77 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 87,153,677 Number of Sequences: 219361 Number of extensions: 1837459 Number of successful extensions: 6329 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 6006 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6322 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 5972710590 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
