Clone Name | rbasd16m08 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK106114.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-E02, full insert sequence Length = 1722 Score = 454 bits (229), Expect = e-124 Identities = 437/501 (87%), Gaps = 9/501 (1%) Strand = Plus / Minus Query: 209 tctactggcagctcgctaatcgcgatcgctgacccaagacgccagccattctgcacgttg 268 ||||||||||||| || |||||| |||||||||| | || |||||||||| |||||||| Sbjct: 1557 tctactggcagcttgcgaatcgcaatcgctgaccaaggatgccagccatttggcacgttg 1498 Query: 269 cctccaacagcttgcctcgccggagcttgctcttcctg---gagccggtgacggcgggcg 325 | || |||| |||||||| |||||| ||| ||||| || | ||||||||||||||||| Sbjct: 1497 cttctaacaacttgcctctccggagtttgttcttcttgcgagtgccggtgacggcgggcg 1438 Query: 326 ccttcctctccggggtggagaccggcgtggccggcttcttgtcgtcctccgggagcagca 385 || |||| |||| | | | |||||| ||| ||| |||| ||| ||||| ||||| Sbjct: 1437 ccctcctgaccggcgccgtgtccggcg---ccgtcttggtgtcatccggcgggaacagca 1381 Query: 386 cggcgtcgatgccctgcaccgagatcctgccgtccgtgtagatgtccgggtcgaagaggt 445 ||||||| ||||||||||| | ||||||||| |||||||||||||||||||||||||| | Sbjct: 1380 cggcgtcaatgccctgcactgcgatcctgccatccgtgtagatgtccgggtcgaagagat 1321 Query: 446 aggcggagccctcgccctggccgaacttgacggagccgtcggcctccctcgccaccacct 505 | || ||||||||||| |||||||||||||| |||||||||||||| | ||||||||||| Sbjct: 1320 acgccgagccctcgccatggccgaacttgactgagccgtcggcctcgcgcgccaccacct 1261 Query: 506 tgtgcggcagccgcagcgtgtcgtaccgcaccttgccgaaccggcggacggcgttgtaca 565 ||||||||||||||||||||||||| ||||||||||||||||| || || |||||||||| Sbjct: 1260 tgtgcggcagccgcagcgtgtcgtagcgcaccttgccgaaccgccgcaccgcgttgtaca 1201 Query: 566 tgctctcctccgtctggtactccgggatcatgtggtagtagaaggatgttctccggcgac 625 |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1200 tgctctcctcggtctggtactccgggatcatgtggtagta-caggatgttctccggcgag 1142 Query: 626 ccgggctcgctcagctggtcccgtggtcagccgcgccatggccttcgtcgttgggcgcca 685 ||||||||||| ||||||| | ||||| || |||||||||||| |||||||||||||| | Sbjct: 1141 ccgggctcgctgagctggt-cggtggtgaggcgcgccatggcc-tcgtcgttgggcgcga 1084 Query: 686 gcacggtcagcacgtacccct 706 ||||||| ||||||||||||| Sbjct: 1083 gcacggtgagcacgtacccct 1063
>dbj|AK069046.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009K09, full insert sequence Length = 1903 Score = 454 bits (229), Expect = e-124 Identities = 437/501 (87%), Gaps = 9/501 (1%) Strand = Plus / Minus Query: 209 tctactggcagctcgctaatcgcgatcgctgacccaagacgccagccattctgcacgttg 268 ||||||||||||| || |||||| |||||||||| | || |||||||||| |||||||| Sbjct: 1558 tctactggcagcttgcgaatcgcaatcgctgaccaaggatgccagccatttggcacgttg 1499 Query: 269 cctccaacagcttgcctcgccggagcttgctcttcctg---gagccggtgacggcgggcg 325 | || |||| |||||||| |||||| ||| ||||| || | ||||||||||||||||| Sbjct: 1498 cttctaacaacttgcctctccggagtttgttcttcttgcgagtgccggtgacggcgggcg 1439 Query: 326 ccttcctctccggggtggagaccggcgtggccggcttcttgtcgtcctccgggagcagca 385 || |||| |||| | | | |||||| ||| ||| |||| ||| ||||| ||||| Sbjct: 1438 ccctcctgaccggcgccgtgtccggcg---ccgtcttggtgtcatccggcgggaacagca 1382 Query: 386 cggcgtcgatgccctgcaccgagatcctgccgtccgtgtagatgtccgggtcgaagaggt 445 ||||||| ||||||||||| | ||||||||| |||||||||||||||||||||||||| | Sbjct: 1381 cggcgtcaatgccctgcactgcgatcctgccatccgtgtagatgtccgggtcgaagagat 1322 Query: 446 aggcggagccctcgccctggccgaacttgacggagccgtcggcctccctcgccaccacct 505 | || ||||||||||| |||||||||||||| |||||||||||||| | ||||||||||| Sbjct: 1321 acgccgagccctcgccatggccgaacttgactgagccgtcggcctcgcgcgccaccacct 1262 Query: 506 tgtgcggcagccgcagcgtgtcgtaccgcaccttgccgaaccggcggacggcgttgtaca 565 ||||||||||||||||||||||||| ||||||||||||||||| || || |||||||||| Sbjct: 1261 tgtgcggcagccgcagcgtgtcgtagcgcaccttgccgaaccgccgcaccgcgttgtaca 1202 Query: 566 tgctctcctccgtctggtactccgggatcatgtggtagtagaaggatgttctccggcgac 625 |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1201 tgctctcctcggtctggtactccgggatcatgtggtagta-caggatgttctccggcgag 1143 Query: 626 ccgggctcgctcagctggtcccgtggtcagccgcgccatggccttcgtcgttgggcgcca 685 ||||||||||| ||||||| | ||||| || |||||||||||| |||||||||||||| | Sbjct: 1142 ccgggctcgctgagctggt-cggtggtgaggcgcgccatggcc-tcgtcgttgggcgcga 1085 Query: 686 gcacggtcagcacgtacccct 706 ||||||| ||||||||||||| Sbjct: 1084 gcacggtgagcacgtacccct 1064
>ref|XM_476698.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1902 Score = 430 bits (217), Expect = e-117 Identities = 301/325 (92%), Gaps = 3/325 (0%) Strand = Plus / Minus Query: 382 agcacggcgtcgatgccctgcaccgagatcctgccgtccgtgtagatgtccgggtcgaag 441 ||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 1305 agcacggcgtcgatgccctgcacggagatcctcccgtcggtgtagatgtccgggtcgaac 1246 Query: 442 aggtaggcggagccctcgccctggccgaacttgacggagccgtcggcctccctcgccacc 501 |||||||||||||||||||| |||||||||||||| || |||||||||||||||||| | Sbjct: 1245 aggtaggcggagccctcgccatggccgaacttgaccgacccgtcggcctccctcgccgtc 1186 Query: 502 accttgtgcggcagccgcagcgtgtcgtaccgcaccttgccgaaccggcggacggcgttg 561 ||||||| |||||||||||||||||||||| |||||| ||||| ||||| || |||||| Sbjct: 1185 accttgttgggcagccgcagcgtgtcgtacctcaccttcccgaagcggcgcaccgcgttg 1126 Query: 562 tacatgctctcctccgtctggtactccgggatcatgtggtagtagaaggatgttctccgg 621 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1125 tacatgctctcctccgtctggtactccgggatcatgtggtagtag-aggatgttctccgg 1067 Query: 622 cgacccgggctcgctcagctggtcccgtggtcagccgcgccatggccttcgtcgttgggc 681 |||||| |||||||| ||||||| | ||||| ||||||||||||||| |||||||||||| Sbjct: 1066 cgaccccggctcgctgagctggt-cggtggtgagccgcgccatggcc-tcgtcgttgggc 1009 Query: 682 gccagcacggtcagcacgtacccct 706 ||||||||||| ||||||||||||| Sbjct: 1008 gccagcacggtgagcacgtacccct 984
>ref|XM_506171.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1714_H10.127 mRNA Length = 1913 Score = 430 bits (217), Expect = e-117 Identities = 301/325 (92%), Gaps = 3/325 (0%) Strand = Plus / Minus Query: 382 agcacggcgtcgatgccctgcaccgagatcctgccgtccgtgtagatgtccgggtcgaag 441 ||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 1317 agcacggcgtcgatgccctgcacggagatcctcccgtcggtgtagatgtccgggtcgaac 1258 Query: 442 aggtaggcggagccctcgccctggccgaacttgacggagccgtcggcctccctcgccacc 501 |||||||||||||||||||| |||||||||||||| || |||||||||||||||||| | Sbjct: 1257 aggtaggcggagccctcgccatggccgaacttgaccgacccgtcggcctccctcgccgtc 1198 Query: 502 accttgtgcggcagccgcagcgtgtcgtaccgcaccttgccgaaccggcggacggcgttg 561 ||||||| |||||||||||||||||||||| |||||| ||||| ||||| || |||||| Sbjct: 1197 accttgttgggcagccgcagcgtgtcgtacctcaccttcccgaagcggcgcaccgcgttg 1138 Query: 562 tacatgctctcctccgtctggtactccgggatcatgtggtagtagaaggatgttctccgg 621 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1137 tacatgctctcctccgtctggtactccgggatcatgtggtagtag-aggatgttctccgg 1079 Query: 622 cgacccgggctcgctcagctggtcccgtggtcagccgcgccatggccttcgtcgttgggc 681 |||||| |||||||| ||||||| | ||||| ||||||||||||||| |||||||||||| Sbjct: 1078 cgaccccggctcgctgagctggt-cggtggtgagccgcgccatggcc-tcgtcgttgggc 1021 Query: 682 gccagcacggtcagcacgtacccct 706 ||||||||||| ||||||||||||| Sbjct: 1020 gccagcacggtgagcacgtacccct 996
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 430 bits (217), Expect = e-117 Identities = 301/325 (92%), Gaps = 3/325 (0%) Strand = Plus / Minus Query: 382 agcacggcgtcgatgccctgcaccgagatcctgccgtccgtgtagatgtccgggtcgaag 441 ||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 3291792 agcacggcgtcgatgccctgcacggagatcctcccgtcggtgtagatgtccgggtcgaac 3291733 Query: 442 aggtaggcggagccctcgccctggccgaacttgacggagccgtcggcctccctcgccacc 501 |||||||||||||||||||| |||||||||||||| || |||||||||||||||||| | Sbjct: 3291732 aggtaggcggagccctcgccatggccgaacttgaccgacccgtcggcctccctcgccgtc 3291673 Query: 502 accttgtgcggcagccgcagcgtgtcgtaccgcaccttgccgaaccggcggacggcgttg 561 ||||||| |||||||||||||||||||||| |||||| ||||| ||||| || |||||| Sbjct: 3291672 accttgttgggcagccgcagcgtgtcgtacctcaccttcccgaagcggcgcaccgcgttg 3291613 Query: 562 tacatgctctcctccgtctggtactccgggatcatgtggtagtagaaggatgttctccgg 621 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 3291612 tacatgctctcctccgtctggtactccgggatcatgtggtagtag-aggatgttctccgg 3291554 Query: 622 cgacccgggctcgctcagctggtcccgtggtcagccgcgccatggccttcgtcgttgggc 681 |||||| |||||||| ||||||| | ||||| ||||||||||||||| |||||||||||| Sbjct: 3291553 cgaccccggctcgctgagctggt-cggtggtgagccgcgccatggcc-tcgtcgttgggc 3291496 Query: 682 gccagcacggtcagcacgtacccct 706 ||||||||||| ||||||||||||| Sbjct: 3291495 gccagcacggtgagcacgtacccct 3291471
>dbj|AK098844.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000B24, full insert sequence Length = 1902 Score = 430 bits (217), Expect = e-117 Identities = 301/325 (92%), Gaps = 3/325 (0%) Strand = Plus / Minus Query: 382 agcacggcgtcgatgccctgcaccgagatcctgccgtccgtgtagatgtccgggtcgaag 441 ||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 1305 agcacggcgtcgatgccctgcacggagatcctcccgtcggtgtagatgtccgggtcgaac 1246 Query: 442 aggtaggcggagccctcgccctggccgaacttgacggagccgtcggcctccctcgccacc 501 |||||||||||||||||||| |||||||||||||| || |||||||||||||||||| | Sbjct: 1245 aggtaggcggagccctcgccatggccgaacttgaccgacccgtcggcctccctcgccgtc 1186 Query: 502 accttgtgcggcagccgcagcgtgtcgtaccgcaccttgccgaaccggcggacggcgttg 561 ||||||| |||||||||||||||||||||| |||||| ||||| ||||| || |||||| Sbjct: 1185 accttgttgggcagccgcagcgtgtcgtacctcaccttcccgaagcggcgcaccgcgttg 1126 Query: 562 tacatgctctcctccgtctggtactccgggatcatgtggtagtagaaggatgttctccgg 621 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1125 tacatgctctcctccgtctggtactccgggatcatgtggtagtag-aggatgttctccgg 1067 Query: 622 cgacccgggctcgctcagctggtcccgtggtcagccgcgccatggccttcgtcgttgggc 681 |||||| |||||||| ||||||| | ||||| ||||||||||||||| |||||||||||| Sbjct: 1066 cgaccccggctcgctgagctggt-cggtggtgagccgcgccatggcc-tcgtcgttgggc 1009 Query: 682 gccagcacggtcagcacgtacccct 706 ||||||||||| ||||||||||||| Sbjct: 1008 gccagcacggtgagcacgtacccct 984
>dbj|AK065047.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001I08, full insert sequence Length = 1915 Score = 430 bits (217), Expect = e-117 Identities = 301/325 (92%), Gaps = 3/325 (0%) Strand = Plus / Minus Query: 382 agcacggcgtcgatgccctgcaccgagatcctgccgtccgtgtagatgtccgggtcgaag 441 ||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 1317 agcacggcgtcgatgccctgcacggagatcctcccgtcggtgtagatgtccgggtcgaac 1258 Query: 442 aggtaggcggagccctcgccctggccgaacttgacggagccgtcggcctccctcgccacc 501 |||||||||||||||||||| |||||||||||||| || |||||||||||||||||| | Sbjct: 1257 aggtaggcggagccctcgccatggccgaacttgaccgacccgtcggcctccctcgccgtc 1198 Query: 502 accttgtgcggcagccgcagcgtgtcgtaccgcaccttgccgaaccggcggacggcgttg 561 ||||||| |||||||||||||||||||||| |||||| ||||| ||||| || |||||| Sbjct: 1197 accttgttgggcagccgcagcgtgtcgtacctcaccttcccgaagcggcgcaccgcgttg 1138 Query: 562 tacatgctctcctccgtctggtactccgggatcatgtggtagtagaaggatgttctccgg 621 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1137 tacatgctctcctccgtctggtactccgggatcatgtggtagtag-aggatgttctccgg 1079 Query: 622 cgacccgggctcgctcagctggtcccgtggtcagccgcgccatggccttcgtcgttgggc 681 |||||| |||||||| ||||||| | ||||| ||||||||||||||| |||||||||||| Sbjct: 1078 cgaccccggctcgctgagctggt-cggtggtgagccgcgccatggcc-tcgtcgttgggc 1021 Query: 682 gccagcacggtcagcacgtacccct 706 ||||||||||| ||||||||||||| Sbjct: 1020 gccagcacggtgagcacgtacccct 996
>dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1714_H10 Length = 191580 Score = 430 bits (217), Expect = e-117 Identities = 301/325 (92%), Gaps = 3/325 (0%) Strand = Plus / Minus Query: 382 agcacggcgtcgatgccctgcaccgagatcctgccgtccgtgtagatgtccgggtcgaag 441 ||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 101485 agcacggcgtcgatgccctgcacggagatcctcccgtcggtgtagatgtccgggtcgaac 101426 Query: 442 aggtaggcggagccctcgccctggccgaacttgacggagccgtcggcctccctcgccacc 501 |||||||||||||||||||| |||||||||||||| || |||||||||||||||||| | Sbjct: 101425 aggtaggcggagccctcgccatggccgaacttgaccgacccgtcggcctccctcgccgtc 101366 Query: 502 accttgtgcggcagccgcagcgtgtcgtaccgcaccttgccgaaccggcggacggcgttg 561 ||||||| |||||||||||||||||||||| |||||| ||||| ||||| || |||||| Sbjct: 101365 accttgttgggcagccgcagcgtgtcgtacctcaccttcccgaagcggcgcaccgcgttg 101306 Query: 562 tacatgctctcctccgtctggtactccgggatcatgtggtagtagaaggatgttctccgg 621 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 101305 tacatgctctcctccgtctggtactccgggatcatgtggtagtag-aggatgttctccgg 101247 Query: 622 cgacccgggctcgctcagctggtcccgtggtcagccgcgccatggccttcgtcgttgggc 681 |||||| |||||||| ||||||| | ||||| ||||||||||||||| |||||||||||| Sbjct: 101246 cgaccccggctcgctgagctggt-cggtggtgagccgcgccatggcc-tcgtcgttgggc 101189 Query: 682 gccagcacggtcagcacgtacccct 706 ||||||||||| ||||||||||||| Sbjct: 101188 gccagcacggtgagcacgtacccct 101164
>gb|AY107894.1| Zea mays PCO107975 mRNA sequence Length = 988 Score = 414 bits (209), Expect = e-112 Identities = 299/325 (92%), Gaps = 3/325 (0%) Strand = Plus / Minus Query: 382 agcacggcgtcgatgccctgcaccgagatcctgccgtccgtgtagatgtccgggtcgaag 441 ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 361 agcacggcgtcgatgccctgcacggagatcctgccgtcggtgtagatgtccgggtcgaag 302 Query: 442 aggtaggcggagccctcgccctggccgaacttgacggagccgtcggcctccctcgccacc 501 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || Sbjct: 301 aggtaggcggagccctcgccctggccgaacttgacggagccgtcggcctcccgcgcgacg 242 Query: 502 accttgtgcggcagccgcagcgtgtcgtaccgcaccttgccgaaccggcggacggcgttg 561 |||||||||||||| ||||| |||||||| |||||||||||||| ||||| ||||||||| Sbjct: 241 accttgtgcggcaggcgcagggtgtcgtagcgcaccttgccgaagcggcgcacggcgttg 182 Query: 562 tacatgctctcctccgtctggtactccgggatcatgtggtagtagaaggatgttctccgg 621 |||||| |||||| ||||||||||| |||||||||||||||||| ||||||||||| || Sbjct: 181 tacatggactcctcggtctggtactcggggatcatgtggtagtag-aggatgttctcggg 123 Query: 622 cgacccgggctcgctcagctggtcccgtggtcagccgcgccatggccttcgtcgttgggc 681 ||||||||||||||| ||||||| ||||||| || |||||||||||| ||||||||||| Sbjct: 122 cgacccgggctcgctgagctggt-ccgtggtgaggcgcgccatggcc-tcgtcgttgggg 65 Query: 682 gccagcacggtcagcacgtacccct 706 || |||||||| || ||||| |||| Sbjct: 64 gcgagcacggtgaggacgtagccct 40 Score = 85.7 bits (43), Expect = 2e-13 Identities = 82/95 (86%) Strand = Plus / Minus Query: 209 tctactggcagctcgctaatcgcgatcgctgacccaagacgccagccattctgcacgttg 268 ||||||||||||| || |||||||| |||||||| |||| ||||||| | |||||| | Sbjct: 534 tctactggcagcttgcgaatcgcgaccgctgaccgaagagcccagccacttggcacgtcg 475 Query: 269 cctccaacagcttgcctcgccggagcttgctcttc 303 |||| |||| ||||||||||||||||||| ||||| Sbjct: 474 cctctaacaacttgcctcgccggagcttgatcttc 440
>gb|AC084296.12| Oryza sativa chromosome 3 BAC OSJNBb0024J04 genomic sequence, complete sequence Length = 145507 Score = 412 bits (208), Expect = e-112 Identities = 304/332 (91%), Gaps = 3/332 (0%) Strand = Plus / Plus Query: 375 cgggagcagcacggcgtcgatgccctgcaccgagatcctgccgtccgtgtagatgtccgg 434 ||||| |||||||||||| ||||||||||| | ||||||||| ||||||||||||||||| Sbjct: 107320 cgggaacagcacggcgtcaatgccctgcactgcgatcctgccatccgtgtagatgtccgg 107379 Query: 435 gtcgaagaggtaggcggagccctcgccctggccgaacttgacggagccgtcggcctccct 494 ||||||||| || || ||||||||||| |||||||||||||| |||||||||||||| | Sbjct: 107380 gtcgaagagatacgccgagccctcgccatggccgaacttgactgagccgtcggcctcgcg 107439 Query: 495 cgccaccaccttgtgcggcagccgcagcgtgtcgtaccgcaccttgccgaaccggcggac 554 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 107440 cgccaccaccttgtgcggcagccgcagcgtgtcgtagcgcaccttgccgaaccgccgcac 107499 Query: 555 ggcgttgtacatgctctcctccgtctggtactccgggatcatgtggtagtagaaggatgt 614 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 107500 cgcgttgtacatgctctcctcggtctggtactccgggatcatgtggtagta-caggatgt 107558 Query: 615 tctccggcgacccgggctcgctcagctggtcccgtggtcagccgcgccatggccttcgtc 674 |||||||||| ||||||||||| ||||||| | ||||| || |||||||||||| ||||| Sbjct: 107559 tctccggcgagccgggctcgctgagctggt-cggtggtgaggcgcgccatggcc-tcgtc 107616 Query: 675 gttgggcgccagcacggtcagcacgtacccct 706 ||||||||| |||||||| ||||||||||||| Sbjct: 107617 gttgggcgcgagcacggtgagcacgtacccct 107648 Score = 385 bits (194), Expect = e-103 Identities = 299/330 (90%), Gaps = 3/330 (0%) Strand = Plus / Plus Query: 375 cgggagcagcacggcgtcgatgccctgcaccgagatcctgccgtccgtgtagatgtccgg 434 ||||| |||||||||||| ||||||||||| |||||||||||||| | | |||||||||| Sbjct: 129544 cgggaacagcacggcgtcaatgccctgcactgagatcctgccgtcggcgaagatgtccgg 129603 Query: 435 gtcgaagaggtaggcggagccctcgccctggccgaacttgacggagccgtcggcctccct 494 ||||||||| || || ||||||||||| ||||| |||||||| |||||||||||||| | Sbjct: 129604 gtcgaagagatacgccgagccctcgccatggccaaacttgactgagccgtcggcctcgcg 129663 Query: 495 cgccaccaccttgtgcggcagccgcagcgtgtcgtaccgcaccttgccgaaccggcggac 554 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 129664 cgccaccaccttgtgcggcagccgcagcgtgtcgtagcgcaccttgccgaaccgccgcac 129723 Query: 555 ggcgttgtacatgctctcctccgtctggtactccgggatcatgtggtagtagaaggatgt 614 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 129724 cgcgttgtacatgctctcctcggtctggtactccgggatcatgtggtagta-caggatgt 129782 Query: 615 tctccggcgacccgggctcgctcagctggtcccgtggtcagccgcgccatggccttcgtc 674 |||||||||| ||||||||||| ||||||| | | ||| ||||||||||||||| ||||| Sbjct: 129783 tctccggcgagccgggctcgctgagctggt-cggcggtgagccgcgccatggcc-tcgtc 129840 Query: 675 gttgggcgccagcacggtcagcacgtaccc 704 ||||||||| |||||||| ||| ||||||| Sbjct: 129841 gttgggcgcgagcacggtgagcgcgtaccc 129870 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 209 tctactggcagctcgctaatcgcgatcgctgacccaagacgccagccattctgcacgttg 268 ||||||||||||| || |||||| |||||||||| | || |||||||||| |||||||| Sbjct: 105586 tctactggcagcttgcgaatcgcaatcgctgaccaaggatgccagccatttggcacgttg 105645 Query: 269 cctccaacagcttgcct 285 | || |||| ||||||| Sbjct: 105646 cttctaacaacttgcct 105662
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 412 bits (208), Expect = e-112 Identities = 304/332 (91%), Gaps = 3/332 (0%) Strand = Plus / Plus Query: 375 cgggagcagcacggcgtcgatgccctgcaccgagatcctgccgtccgtgtagatgtccgg 434 ||||| |||||||||||| ||||||||||| | ||||||||| ||||||||||||||||| Sbjct: 32455192 cgggaacagcacggcgtcaatgccctgcactgcgatcctgccatccgtgtagatgtccgg 32455251 Query: 435 gtcgaagaggtaggcggagccctcgccctggccgaacttgacggagccgtcggcctccct 494 ||||||||| || || ||||||||||| |||||||||||||| |||||||||||||| | Sbjct: 32455252 gtcgaagagatacgccgagccctcgccatggccgaacttgactgagccgtcggcctcgcg 32455311 Query: 495 cgccaccaccttgtgcggcagccgcagcgtgtcgtaccgcaccttgccgaaccggcggac 554 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 32455312 cgccaccaccttgtgcggcagccgcagcgtgtcgtagcgcaccttgccgaaccgccgcac 32455371 Query: 555 ggcgttgtacatgctctcctccgtctggtactccgggatcatgtggtagtagaaggatgt 614 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 32455372 cgcgttgtacatgctctcctcggtctggtactccgggatcatgtggtagta-caggatgt 32455430 Query: 615 tctccggcgacccgggctcgctcagctggtcccgtggtcagccgcgccatggccttcgtc 674 |||||||||| ||||||||||| ||||||| | ||||| || |||||||||||| ||||| Sbjct: 32455431 tctccggcgagccgggctcgctgagctggt-cggtggtgaggcgcgccatggcc-tcgtc 32455488 Query: 675 gttgggcgccagcacggtcagcacgtacccct 706 ||||||||| |||||||| ||||||||||||| Sbjct: 32455489 gttgggcgcgagcacggtgagcacgtacccct 32455520 Score = 385 bits (194), Expect = e-103 Identities = 299/330 (90%), Gaps = 3/330 (0%) Strand = Plus / Plus Query: 375 cgggagcagcacggcgtcgatgccctgcaccgagatcctgccgtccgtgtagatgtccgg 434 ||||| |||||||||||| ||||||||||| |||||||||||||| | | |||||||||| Sbjct: 32477416 cgggaacagcacggcgtcaatgccctgcactgagatcctgccgtcggcgaagatgtccgg 32477475 Query: 435 gtcgaagaggtaggcggagccctcgccctggccgaacttgacggagccgtcggcctccct 494 ||||||||| || || ||||||||||| ||||| |||||||| |||||||||||||| | Sbjct: 32477476 gtcgaagagatacgccgagccctcgccatggccaaacttgactgagccgtcggcctcgcg 32477535 Query: 495 cgccaccaccttgtgcggcagccgcagcgtgtcgtaccgcaccttgccgaaccggcggac 554 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 32477536 cgccaccaccttgtgcggcagccgcagcgtgtcgtagcgcaccttgccgaaccgccgcac 32477595 Query: 555 ggcgttgtacatgctctcctccgtctggtactccgggatcatgtggtagtagaaggatgt 614 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 32477596 cgcgttgtacatgctctcctcggtctggtactccgggatcatgtggtagta-caggatgt 32477654 Query: 615 tctccggcgacccgggctcgctcagctggtcccgtggtcagccgcgccatggccttcgtc 674 |||||||||| ||||||||||| ||||||| | | ||| ||||||||||||||| ||||| Sbjct: 32477655 tctccggcgagccgggctcgctgagctggt-cggcggtgagccgcgccatggcc-tcgtc 32477712 Query: 675 gttgggcgccagcacggtcagcacgtaccc 704 ||||||||| |||||||| ||| ||||||| Sbjct: 32477713 gttgggcgcgagcacggtgagcgcgtaccc 32477742 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 209 tctactggcagctcgctaatcgcgatcgctgacccaagacgccagccattctgcacgttg 268 ||||||||||||| || |||||| |||||||||| | || |||||||||| |||||||| Sbjct: 32453458 tctactggcagcttgcgaatcgcaatcgctgaccaaggatgccagccatttggcacgttg 32453517 Query: 269 cctccaacagcttgcct 285 | || |||| ||||||| Sbjct: 32453518 cttctaacaacttgcct 32453534 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 188 tcttcctccatccttccttcttcta 212 |||||||||||||| |||||||||| Sbjct: 23474914 tcttcctccatcctcccttcttcta 23474938 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 480 gccgtcggcctccctcgccaccacc 504 ||||||| ||||||||||||||||| Sbjct: 20737193 gccgtcgtcctccctcgccaccacc 20737169
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 412 bits (208), Expect = e-112 Identities = 304/332 (91%), Gaps = 3/332 (0%) Strand = Plus / Plus Query: 375 cgggagcagcacggcgtcgatgccctgcaccgagatcctgccgtccgtgtagatgtccgg 434 ||||| |||||||||||| ||||||||||| | ||||||||| ||||||||||||||||| Sbjct: 32545702 cgggaacagcacggcgtcaatgccctgcactgcgatcctgccatccgtgtagatgtccgg 32545761 Query: 435 gtcgaagaggtaggcggagccctcgccctggccgaacttgacggagccgtcggcctccct 494 ||||||||| || || ||||||||||| |||||||||||||| |||||||||||||| | Sbjct: 32545762 gtcgaagagatacgccgagccctcgccatggccgaacttgactgagccgtcggcctcgcg 32545821 Query: 495 cgccaccaccttgtgcggcagccgcagcgtgtcgtaccgcaccttgccgaaccggcggac 554 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 32545822 cgccaccaccttgtgcggcagccgcagcgtgtcgtagcgcaccttgccgaaccgccgcac 32545881 Query: 555 ggcgttgtacatgctctcctccgtctggtactccgggatcatgtggtagtagaaggatgt 614 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 32545882 cgcgttgtacatgctctcctcggtctggtactccgggatcatgtggtagta-caggatgt 32545940 Query: 615 tctccggcgacccgggctcgctcagctggtcccgtggtcagccgcgccatggccttcgtc 674 |||||||||| ||||||||||| ||||||| | ||||| || |||||||||||| ||||| Sbjct: 32545941 tctccggcgagccgggctcgctgagctggt-cggtggtgaggcgcgccatggcc-tcgtc 32545998 Query: 675 gttgggcgccagcacggtcagcacgtacccct 706 ||||||||| |||||||| ||||||||||||| Sbjct: 32545999 gttgggcgcgagcacggtgagcacgtacccct 32546030 Score = 385 bits (194), Expect = e-103 Identities = 299/330 (90%), Gaps = 3/330 (0%) Strand = Plus / Plus Query: 375 cgggagcagcacggcgtcgatgccctgcaccgagatcctgccgtccgtgtagatgtccgg 434 ||||| |||||||||||| ||||||||||| |||||||||||||| | | |||||||||| Sbjct: 32567926 cgggaacagcacggcgtcaatgccctgcactgagatcctgccgtcggcgaagatgtccgg 32567985 Query: 435 gtcgaagaggtaggcggagccctcgccctggccgaacttgacggagccgtcggcctccct 494 ||||||||| || || ||||||||||| ||||| |||||||| |||||||||||||| | Sbjct: 32567986 gtcgaagagatacgccgagccctcgccatggccaaacttgactgagccgtcggcctcgcg 32568045 Query: 495 cgccaccaccttgtgcggcagccgcagcgtgtcgtaccgcaccttgccgaaccggcggac 554 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 32568046 cgccaccaccttgtgcggcagccgcagcgtgtcgtagcgcaccttgccgaaccgccgcac 32568105 Query: 555 ggcgttgtacatgctctcctccgtctggtactccgggatcatgtggtagtagaaggatgt 614 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 32568106 cgcgttgtacatgctctcctcggtctggtactccgggatcatgtggtagta-caggatgt 32568164 Query: 615 tctccggcgacccgggctcgctcagctggtcccgtggtcagccgcgccatggccttcgtc 674 |||||||||| ||||||||||| ||||||| | | ||| ||||||||||||||| ||||| Sbjct: 32568165 tctccggcgagccgggctcgctgagctggt-cggcggtgagccgcgccatggcc-tcgtc 32568222 Query: 675 gttgggcgccagcacggtcagcacgtaccc 704 ||||||||| |||||||| ||| ||||||| Sbjct: 32568223 gttgggcgcgagcacggtgagcgcgtaccc 32568252 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 209 tctactggcagctcgctaatcgcgatcgctgacccaagacgccagccattctgcacgttg 268 ||||||||||||| || |||||| |||||||||| | || |||||||||| |||||||| Sbjct: 32543968 tctactggcagcttgcgaatcgcaatcgctgaccaaggatgccagccatttggcacgttg 32544027 Query: 269 cctccaacagcttgcct 285 | || |||| ||||||| Sbjct: 32544028 cttctaacaacttgcct 32544044 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 188 tcttcctccatccttccttcttcta 212 |||||||||||||| |||||||||| Sbjct: 23467942 tcttcctccatcctcccttcttcta 23467966 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 480 gccgtcggcctccctcgccaccacc 504 ||||||| ||||||||||||||||| Sbjct: 20730222 gccgtcgtcctccctcgccaccacc 20730198
>gb|AC087096.11| Oryza sativa chromosome 3 BAC OSJNBa0087O09 genomic sequence, complete sequence Length = 119134 Score = 385 bits (194), Expect = e-103 Identities = 299/330 (90%), Gaps = 3/330 (0%) Strand = Plus / Plus Query: 375 cgggagcagcacggcgtcgatgccctgcaccgagatcctgccgtccgtgtagatgtccgg 434 ||||| |||||||||||| ||||||||||| |||||||||||||| | | |||||||||| Sbjct: 10865 cgggaacagcacggcgtcaatgccctgcactgagatcctgccgtcggcgaagatgtccgg 10924 Query: 435 gtcgaagaggtaggcggagccctcgccctggccgaacttgacggagccgtcggcctccct 494 ||||||||| || || ||||||||||| ||||| |||||||| |||||||||||||| | Sbjct: 10925 gtcgaagagatacgccgagccctcgccatggccaaacttgactgagccgtcggcctcgcg 10984 Query: 495 cgccaccaccttgtgcggcagccgcagcgtgtcgtaccgcaccttgccgaaccggcggac 554 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 10985 cgccaccaccttgtgcggcagccgcagcgtgtcgtagcgcaccttgccgaaccgccgcac 11044 Query: 555 ggcgttgtacatgctctcctccgtctggtactccgggatcatgtggtagtagaaggatgt 614 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 11045 cgcgttgtacatgctctcctcggtctggtactccgggatcatgtggtagta-caggatgt 11103 Query: 615 tctccggcgacccgggctcgctcagctggtcccgtggtcagccgcgccatggccttcgtc 674 |||||||||| ||||||||||| ||||||| | | ||| ||||||||||||||| ||||| Sbjct: 11104 tctccggcgagccgggctcgctgagctggt-cggcggtgagccgcgccatggcc-tcgtc 11161 Query: 675 gttgggcgccagcacggtcagcacgtaccc 704 ||||||||| |||||||| ||| ||||||| Sbjct: 11162 gttgggcgcgagcacggtgagcgcgtaccc 11191
>dbj|AK073842.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033067C09, full insert sequence Length = 1820 Score = 385 bits (194), Expect = e-103 Identities = 299/330 (90%), Gaps = 3/330 (0%) Strand = Plus / Minus Query: 375 cgggagcagcacggcgtcgatgccctgcaccgagatcctgccgtccgtgtagatgtccgg 434 ||||| |||||||||||| ||||||||||| |||||||||||||| | | |||||||||| Sbjct: 1363 cgggaacagcacggcgtcaatgccctgcactgagatcctgccgtcggcgaagatgtccgg 1304 Query: 435 gtcgaagaggtaggcggagccctcgccctggccgaacttgacggagccgtcggcctccct 494 ||||||||| || || ||||||||||| ||||| |||||||| |||||||||||||| | Sbjct: 1303 gtcgaagagatacgccgagccctcgccatggccaaacttgactgagccgtcggcctcgcg 1244 Query: 495 cgccaccaccttgtgcggcagccgcagcgtgtcgtaccgcaccttgccgaaccggcggac 554 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 1243 cgccaccaccttgtgcggcagccgcagcgtgtcgtagcgcaccttgccgaaccgccgcac 1184 Query: 555 ggcgttgtacatgctctcctccgtctggtactccgggatcatgtggtagtagaaggatgt 614 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 1183 cgcgttgtacatgctctcctcggtctggtactccgggatcatgtggtagta-caggatgt 1125 Query: 615 tctccggcgacccgggctcgctcagctggtcccgtggtcagccgcgccatggccttcgtc 674 |||||||||| ||||||||||| ||||||| | | ||| ||||||||||||||| ||||| Sbjct: 1124 tctccggcgagccgggctcgctgagctggt-cggcggtgagccgcgccatggcc-tcgtc 1067 Query: 675 gttgggcgccagcacggtcagcacgtaccc 704 ||||||||| |||||||| ||| ||||||| Sbjct: 1066 gttgggcgcgagcacggtgagcgcgtaccc 1037
>gb|AY104390.1| Zea mays PCO107974 mRNA sequence Length = 745 Score = 107 bits (54), Expect = 5e-20 Identities = 63/66 (95%) Strand = Plus / Minus Query: 382 agcacggcgtcgatgccctgcaccgagatcctgccgtccgtgtagatgtccgggtcgaag 441 ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||| Sbjct: 355 agcacggcgtcgatgccctgcacggagatcctgccgtcggtgtagatgtccgggtccaag 296 Query: 442 aggtag 447 |||||| Sbjct: 295 aggtag 290
>dbj|AP006114.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT43M15, TM0198a, complete sequence Length = 75051 Score = 97.6 bits (49), Expect = 5e-17 Identities = 169/209 (80%) Strand = Plus / Plus Query: 397 ccctgcaccgagatcctgccgtccgtgtagatgtccgggtcgaagaggtaggcggagccc 456 ||||| |||||||||| ||| || || |||| ||||||||||| | || || || || Sbjct: 15696 ccctggaccgagatccggccatcggtaaagatatccgggtcgaacaaataagccgacccg 15755 Query: 457 tcgccctggccgaacttgacggagccgtcggcctccctcgccaccaccttgtgcggcagc 516 || || |||||||||||||| || || || |||||| | ||||||||||||||||||| | Sbjct: 15756 tctccatggccgaacttgaccgacccatcagcctccttagccaccaccttgtgcggcaac 15815 Query: 517 cgcagcgtgtcgtaccgcaccttgccgaaccggcggacggcgttgtacatgctctcctcc 576 ||||| || ||||| |||||| ||||||| | || || |||||||||||||| ||| Sbjct: 15816 cgcagggtatcgtagttcaccttcccgaaccttctcaccgcattgtacatgctctcttcc 15875 Query: 577 gtctggtactccgggatcatgtggtagta 605 ||||| |||||||| |||| |||||||| Sbjct: 15876 gtctgatactccggtatcaaatggtagta 15904
>gb|AY112540.1| Zea mays CL33472_1 mRNA sequence Length = 452 Score = 61.9 bits (31), Expect = 3e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 209 tctactggcagctcgctaatcgcgatcgctgacccaaga 247 |||||||||||||||| ||||||||||||||||| |||| Sbjct: 383 tctactggcagctcgcgaatcgcgatcgctgaccgaaga 421
>ref|NM_179922.1| Arabidopsis thaliana unknown protein AT2G35860 mRNA, complete cds Length = 1744 Score = 46.1 bits (23), Expect = 0.16 Identities = 41/47 (87%) Strand = Plus / Minus Query: 556 gcgttgtacatgctctcctccgtctggtactccgggatcatgtggta 602 ||||||||||| |||||||| || || |||||||| || |||||||| Sbjct: 1121 gcgttgtacatactctcctctgtttgatactccggtatgatgtggta 1075
>ref|NM_120722.3| Arabidopsis thaliana unknown protein AT5G06390 mRNA, complete cds Length = 2116 Score = 46.1 bits (23), Expect = 0.16 Identities = 41/47 (87%) Strand = Plus / Minus Query: 559 ttgtacatgctctcctccgtctggtactccgggatcatgtggtagta 605 |||||||| ||||||||||| || ||||| ||||| || |||||||| Sbjct: 1143 ttgtacatactctcctccgtttgatactcagggattatatggtagta 1097
>gb|BT020253.1| Arabidopsis thaliana At5g06390 gene, complete cds Length = 1377 Score = 46.1 bits (23), Expect = 0.16 Identities = 41/47 (87%) Strand = Plus / Minus Query: 559 ttgtacatgctctcctccgtctggtactccgggatcatgtggtagta 605 |||||||| ||||||||||| || ||||| ||||| || |||||||| Sbjct: 1055 ttgtacatactctcctccgtttgatactcagggattatatggtagta 1009
>gb|AY541627.1| Leiognathus elongatus from Japan cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial Length = 632 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 188 tcttcctccatccttccttcttctactggca 218 |||||| |||||||| ||||||||||||||| Sbjct: 252 tcttcccccatcctttcttcttctactggca 282
>gb|BT015342.1| Arabidopsis thaliana At5g06390 gene, complete cds Length = 1698 Score = 46.1 bits (23), Expect = 0.16 Identities = 41/47 (87%) Strand = Plus / Minus Query: 559 ttgtacatgctctcctccgtctggtactccgggatcatgtggtagta 605 |||||||| ||||||||||| || ||||| ||||| || |||||||| Sbjct: 1097 ttgtacatactctcctccgtttgatactcagggattatatggtagta 1051
>gb|AY093189.1| Arabidopsis thaliana unknown protein (At2g35860) mRNA, complete cds Length = 1694 Score = 46.1 bits (23), Expect = 0.16 Identities = 41/47 (87%) Strand = Plus / Minus Query: 556 gcgttgtacatgctctcctccgtctggtactccgggatcatgtggta 602 ||||||||||| |||||||| || || |||||||| || |||||||| Sbjct: 1071 gcgttgtacatactctcctctgtttgatactccggtatgatgtggta 1025
>gb|AC007017.4| Arabidopsis thaliana chromosome 2 clone F11F19 map g6825, complete sequence Length = 120938 Score = 46.1 bits (23), Expect = 0.16 Identities = 41/47 (87%) Strand = Plus / Plus Query: 556 gcgttgtacatgctctcctccgtctggtactccgggatcatgtggta 602 ||||||||||| |||||||| || || |||||||| || |||||||| Sbjct: 96145 gcgttgtacatactctcctctgtttgatactccggtatgatgtggta 96191
>gb|BT006590.1| Arabidopsis thaliana At2g35860 mRNA, complete cds Length = 1338 Score = 46.1 bits (23), Expect = 0.16 Identities = 41/47 (87%) Strand = Plus / Minus Query: 556 gcgttgtacatgctctcctccgtctggtactccgggatcatgtggta 602 ||||||||||| |||||||| || || |||||||| || |||||||| Sbjct: 1025 gcgttgtacatactctcctctgtttgatactccggtatgatgtggta 979
>emb|BX820376.1|CNS0A8QI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH27ZE05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1533 Score = 46.1 bits (23), Expect = 0.16 Identities = 41/47 (87%) Strand = Plus / Minus Query: 556 gcgttgtacatgctctcctccgtctggtactccgggatcatgtggta 602 ||||||||||| |||||||| || || |||||||| || |||||||| Sbjct: 1082 gcgttgtacatactctcctctgtttgatactccggtatgatgtggta 1036
>emb|BX819499.1|CNS0A8UW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB84ZC07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1506 Score = 46.1 bits (23), Expect = 0.16 Identities = 41/47 (87%) Strand = Plus / Minus Query: 556 gcgttgtacatgctctcctccgtctggtactccgggatcatgtggta 602 ||||||||||| |||||||| || || |||||||| || |||||||| Sbjct: 1056 gcgttgtacatactctcctctgtttgatactccggtatgatgtggta 1010
>emb|BX820863.1|CNS0A8OL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH76ZD06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1550 Score = 46.1 bits (23), Expect = 0.16 Identities = 41/47 (87%) Strand = Plus / Minus Query: 556 gcgttgtacatgctctcctccgtctggtactccgggatcatgtggta 602 ||||||||||| |||||||| || || |||||||| || |||||||| Sbjct: 1086 gcgttgtacatactctcctctgtttgatactccggtatgatgtggta 1040
>emb|BX820101.1|CNS0A8IG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS74ZB04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1615 Score = 46.1 bits (23), Expect = 0.16 Identities = 41/47 (87%) Strand = Plus / Minus Query: 556 gcgttgtacatgctctcctccgtctggtactccgggatcatgtggta 602 ||||||||||| |||||||| || || |||||||| || |||||||| Sbjct: 1024 gcgttgtacatactctcctctgtttgatactccggtatgatgtggta 978
>emb|BX831388.1|CNS0A1M2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS85ZD04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1797 Score = 46.1 bits (23), Expect = 0.16 Identities = 41/47 (87%) Strand = Plus / Minus Query: 559 ttgtacatgctctcctccgtctggtactccgggatcatgtggtagta 605 |||||||| ||||||||||| || ||||| ||||| || |||||||| Sbjct: 1141 ttgtacatactctcctccgtttgatactcagggattatatggtagta 1095
>dbj|AB006700.2| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MHF15 Length = 83865 Score = 46.1 bits (23), Expect = 0.16 Identities = 41/47 (87%) Strand = Plus / Minus Query: 559 ttgtacatgctctcctccgtctggtactccgggatcatgtggtagta 605 |||||||| ||||||||||| || ||||| ||||| || |||||||| Sbjct: 62461 ttgtacatactctcctccgtttgatactcagggattatatggtagta 62415
>gb|AY666511.1| Piranga olivacea voucher 1B-1258 cytochrome oxidase subunit 1 (COI) gene, partial cds; mitochondrial Length = 659 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Plus Query: 189 cttcctccatccttccttcttctact 214 ||||| |||||||||||||||||||| Sbjct: 228 cttcccccatccttccttcttctact 253
>gb|AC110898.7| Mus musculus chromosome 18, clone RP24-114C6, complete sequence Length = 161778 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 188 tcttcctccatccttccttctt 209 |||||||||||||||||||||| Sbjct: 127023 tcttcctccatccttccttctt 127044
>gb|AY275859.1| Cypseloides rutilus cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial gene for mitochondrial product Length = 384 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Plus Query: 189 cttcctccatccttccttcttctact 214 |||||||||||||||||||| ||||| Sbjct: 316 cttcctccatccttccttctcctact 341
>gb|AF391350.1| Stiphodon elegans cytochrome c oxidase subunit I gene, partial cds; mitochondrial gene for mitochondrial product Length = 1551 Score = 44.1 bits (22), Expect = 0.62 Identities = 28/30 (93%) Strand = Plus / Plus Query: 188 tcttcctccatccttccttcttctactggc 217 |||||||||||| ||||||||||| ||||| Sbjct: 309 tcttcctccatcattccttcttcttctggc 338
>gb|AF460846.1| Cynocephalus variegatus mitochondrion, complete genome Length = 16781 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Plus Query: 189 cttcctccatccttccttcttctact 214 ||||||||||||||||| |||||||| Sbjct: 5667 cttcctccatccttcctacttctact 5692
>emb|AL954143.9| Zebrafish DNA sequence from clone CH211-206A7 in linkage group 19, complete sequence Length = 168515 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 177 atgagatcaaatcttcctccat 198 |||||||||||||||||||||| Sbjct: 91569 atgagatcaaatcttcctccat 91590
>emb|AL672103.10| Mouse DNA sequence from clone RP23-375G11 on chromosome X, complete sequence Length = 196568 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 188 tcttcctccatccttccttctt 209 |||||||||||||||||||||| Sbjct: 42363 tcttcctccatccttccttctt 42342
>ref|NM_112002.2| Arabidopsis thaliana unknown protein AT3G11700 mRNA, complete cds Length = 1970 Score = 42.1 bits (21), Expect = 2.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 562 tacatgctctcctccgtctggtactccgggatcatgtggta 602 |||||||| ||||||||||| ||||| || || |||||||| Sbjct: 1214 tacatgctttcctccgtctgatactctggaataatgtggta 1174
>gb|AF165496.1| Ortalis canicollis cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial Length = 1088 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 189 cttcctccatccttccttcttctactggc 217 ||||| |||||||||||||| |||||||| Sbjct: 148 cttcccccatccttccttctcctactggc 176
>gb|AC147312.3| Pan troglodytes BAC clone RP43-50K12 from 7, complete sequence Length = 214157 Score = 42.1 bits (21), Expect = 2.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 50 ataatagtaataaacaaaaaagnaacag 77 |||||| ||||||||||||||| ||||| Sbjct: 165490 ataataataataaacaaaaaagaaacag 165517
>gb|AC093312.7| Oryza sativa chromosome 3 BAC OSJNBa0095N06 genomic sequence, complete sequence Length = 152417 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 480 gccgtcggcctccctcgccaccacc 504 ||||||| ||||||||||||||||| Sbjct: 150950 gccgtcgtcctccctcgccaccacc 150926
>gb|AC092780.6| Oryza sativa chromosome 3 BAC OSJNBb0079B16 genomic sequence, complete sequence Length = 144383 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 188 tcttcctccatccttccttcttcta 212 |||||||||||||| |||||||||| Sbjct: 107343 tcttcctccatcctcccttcttcta 107319
>gb|AC009918.5|ATAC009918 Arabidopsis thaliana chromosome III BAC T19F11 genomic sequence, complete sequence Length = 45173 Score = 42.1 bits (21), Expect = 2.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 562 tacatgctctcctccgtctggtactccgggatcatgtggta 602 |||||||| ||||||||||| ||||| || || |||||||| Sbjct: 36750 tacatgctttcctccgtctgatactctggaataatgtggta 36710
>gb|AC016795.6|ATAC016795 Arabidopsis thaliana chromosome III BAC F26K24 genomic sequence, complete sequence Length = 100835 Score = 42.1 bits (21), Expect = 2.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 562 tacatgctctcctccgtctggtactccgggatcatgtggta 602 |||||||| ||||||||||| ||||| || || |||||||| Sbjct: 582 tacatgctttcctccgtctgatactctggaataatgtggta 542
>gb|AC006010.2| Homo sapiens PAC clone RP5-865F17 from 7, complete sequence Length = 114631 Score = 42.1 bits (21), Expect = 2.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 50 ataatagtaataaacaaaaaagnaacag 77 |||||| ||||||||||||||| ||||| Sbjct: 43051 ataataataataaacaaaaaagaaacag 43024
>gb|AC114553.6| Mus musculus chromosome 5, clone RP23-408M16, complete sequence Length = 198281 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 tccacagtagtataatagtaa 59 ||||||||||||||||||||| Sbjct: 151331 tccacagtagtataatagtaa 151351
>emb|AL354945.17| Human DNA sequence from clone RP11-59K17 on chromosome 6, complete sequence Length = 120745 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 47 agtataatagtaataaacaaaaaag 71 ||||||||||||||||| ||||||| Sbjct: 60032 agtataatagtaataaaaaaaaaag 60056
>gb|AC117472.3| Homo sapiens 3 BAC RP11-567P17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 119730 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 47 agtataatagtaataaacaaaaaag 71 ||||||||| ||||||||||||||| Sbjct: 99434 agtataataataataaacaaaaaag 99410
>gb|AY133794.1| Arabidopsis thaliana clone U10635 unknown protein (At3g11700) mRNA, complete cds Length = 1420 Score = 42.1 bits (21), Expect = 2.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 562 tacatgctctcctccgtctggtactccgggatcatgtggta 602 |||||||| ||||||||||| ||||| || || |||||||| Sbjct: 1061 tacatgctttcctccgtctgatactctggaataatgtggta 1021
>gb|AY056197.1| Arabidopsis thaliana unknown protein (At3g11700) mRNA, complete cds Length = 1982 Score = 42.1 bits (21), Expect = 2.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 562 tacatgctctcctccgtctggtactccgggatcatgtggta 602 |||||||| ||||||||||| ||||| || || |||||||| Sbjct: 1207 tacatgctttcctccgtctgatactctggaataatgtggta 1167
>gb|AC122587.5| Rattus norvegicus BAC CH230-173H6 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 202972 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 187 atcttcctccatccttccttcttct 211 |||||||||| |||||||||||||| Sbjct: 7672 atcttcctccttccttccttcttct 7648
>gb|AC087244.17| Homo sapiens 12 BAC RP11-444N1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 187111 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 47 agtataatagtaataaacaaaaaag 71 ||||||||||||||||| ||||||| Sbjct: 102306 agtataatagtaataaaaaaaaaag 102330
>gb|AC093182.3| Homo sapiens chromosome 7 clone RP11-19B3, complete sequence Length = 155164 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 47 agtataatagtaataaacaaaaaag 71 ||||||||||||||||| ||||||| Sbjct: 138624 agtataatagtaataaaaaaaaaag 138600
>gb|AC096749.2| Homo sapiens BAC clone RP11-415L23 from 4, complete sequence Length = 112187 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 185 aaatcttcctccatccttcct 205 ||||||||||||||||||||| Sbjct: 79059 aaatcttcctccatccttcct 79039
>gb|AC159028.3| Pan troglodytes BAC clone CH251-413M12 from chromosome unknown, complete sequence Length = 172935 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 185 aaatcttcctccatccttcct 205 ||||||||||||||||||||| Sbjct: 1746 aaatcttcctccatccttcct 1726
>gb|AY058879.1| Arabidopsis thaliana AT3g11700/T19F11_10 mRNA, complete cds Length = 1651 Score = 42.1 bits (21), Expect = 2.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 562 tacatgctctcctccgtctggtactccgggatcatgtggta 602 |||||||| ||||||||||| ||||| || || |||||||| Sbjct: 1214 tacatgctttcctccgtctgatactctggaataatgtggta 1174
>gb|AC161820.5| Pan troglodytes BAC clone CH251-502M7 from chromosome unknown, complete sequence Length = 169869 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 185 aaatcttcctccatccttcct 205 ||||||||||||||||||||| Sbjct: 21705 aaatcttcctccatccttcct 21725
>gb|AC134887.4| Oryza sativa chromosome 3 BAC OSJNBa0029P07 genomic sequence, complete sequence Length = 142047 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 480 gccgtcggcctccctcgccaccacc 504 ||||||| ||||||||||||||||| Sbjct: 27303 gccgtcgtcctccctcgccaccacc 27279
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 187 atcttcctccatccttccttcttct 211 ||||||||||||||| ||||||||| Sbjct: 10810832 atcttcctccatcctcccttcttct 10810808 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 tcttcctccatccttccttc 207 |||||||||||||||||||| Sbjct: 12458489 tcttcctccatccttccttc 12458508 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 188 tcttcctccatccttccttcttct 211 ||||||||| |||||||||||||| Sbjct: 5152952 tcttcctccttccttccttcttct 5152929 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 188 tcttcctccatccttccttcttct 211 ||||||||| |||||||||||||| Sbjct: 5144191 tcttcctccttccttccttcttct 5144168
>gb|AC105443.3| Homo sapiens chromosome 7 clone RP11-533N5, complete sequence Length = 185272 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 47 agtataatagtaataaacaaaaaag 71 ||||||||||||||||| ||||||| Sbjct: 55503 agtataatagtaataaaaaaaaaag 55479
>emb|BX822679.1|CNS0A653 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB58ZC01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1589 Score = 42.1 bits (21), Expect = 2.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 562 tacatgctctcctccgtctggtactccgggatcatgtggta 602 |||||||| ||||||||||| ||||| || || |||||||| Sbjct: 1191 tacatgctttcctccgtctgatactctggaataatgtggta 1151
>emb|BX824454.1|CNS0A5OI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH4ZE02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1530 Score = 42.1 bits (21), Expect = 2.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 562 tacatgctctcctccgtctggtactccgggatcatgtggta 602 |||||||| ||||||||||| ||||| || || |||||||| Sbjct: 1155 tacatgctttcctccgtctgatactctggaataatgtggta 1115
>gb|AC097628.2| Takifugu rubripes clone 264E2, complete sequence Length = 88203 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 481 ccgtcggcctccctcgccacc 501 ||||||||||||||||||||| Sbjct: 41738 ccgtcggcctccctcgccacc 41718
>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0512H04 Length = 151049 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 187 atcttcctccatccttccttcttct 211 ||||||||||||||| ||||||||| Sbjct: 34555 atcttcctccatcctcccttcttct 34531
>gb|AC027700.11| Mus musculus chromosome 10, clone RP23-145G7, complete sequence Length = 227454 Score = 42.1 bits (21), Expect = 2.5 Identities = 25/27 (92%) Strand = Plus / Minus Query: 61 aaacaaaaaagnaacagnaacagcaaa 87 ||||||||||| ||||| ||||||||| Sbjct: 165803 aaacaaaaaagcaacagcaacagcaaa 165777
>gb|AF036942.1|AF036942 Gallus gallus photoreceptor guanylate cyclase 1 (GC1) mRNA, partial cds Length = 3672 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 372 ctccgggagcagcacggcgtc 392 ||||||||||||||||||||| Sbjct: 144 ctccgggagcagcacggcgtc 124
>dbj|AB034825.1| Diplophos taenia mitochondrial DNA, complete genome Length = 16418 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 189 cttcctccatccttccttcttctactggc 217 |||||||| |||||||||||||| ||||| Sbjct: 5778 cttcctccctccttccttcttctcctggc 5806
>gb|AY666413.1| Bombycilla garrulus voucher 1B-2754 cytochrome oxidase subunit 1 (COI) gene, partial cds; mitochondrial Length = 656 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 cttcctccatccttccttct 208 |||||||||||||||||||| Sbjct: 225 cttcctccatccttccttct 244
>gb|AC120348.9| Mus musculus chromosome 5, clone RP23-55P22, complete sequence Length = 244565 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 aaatcttcctccatccttcc 204 |||||||||||||||||||| Sbjct: 128670 aaatcttcctccatccttcc 128689
>ref|XM_464300.1| Oryza sativa (japonica cultivar-group), mRNA Length = 177 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 481 ccgtcggcctccctcgccaccacc 504 |||||| ||||||||||||||||| Sbjct: 89 ccgtcgtcctccctcgccaccacc 66
>ref|XM_450393.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1704 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 188 tcttcctccatccttccttcttct 211 ||||||||| |||||||||||||| Sbjct: 405 tcttcctccttccttccttcttct 382
>gb|AC103637.11| Mus musculus chromosome 3, clone RP24-376O20, complete sequence Length = 120487 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 cttcctccatccttccttct 208 |||||||||||||||||||| Sbjct: 32148 cttcctccatccttccttct 32167
>gb|AC115932.11| Mus musculus chromosome 1, clone RP24-538F21, complete sequence Length = 205378 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 ttcctccatccttccttctt 209 |||||||||||||||||||| Sbjct: 106033 ttcctccatccttccttctt 106014
>gb|AC164649.4| Mus musculus BAC clone RP23-437D10 from chromosome 5, complete sequence Length = 215766 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 tcttcctccatccttccttc 207 |||||||||||||||||||| Sbjct: 180685 tcttcctccatccttccttc 180704
>gb|AC115746.10| Mus musculus chromosome 15, clone RP23-3J8, complete sequence Length = 214765 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 caatcatgagatcaaatctt 191 |||||||||||||||||||| Sbjct: 207321 caatcatgagatcaaatctt 207340
>gb|AC139377.4| Mus musculus chromosome 5 clone RP24-291G12, complete sequence Length = 191100 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 tcttcctccatccttccttc 207 |||||||||||||||||||| Sbjct: 5311 tcttcctccatccttccttc 5330
>gb|AC140042.19| Mus musculus chromosome 5, clone RP23-437D10, complete sequence Length = 215786 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 tcttcctccatccttccttc 207 |||||||||||||||||||| Sbjct: 35082 tcttcctccatccttccttc 35063
>gb|AC166290.7| Mus musculus BAC RP23-14P17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 242055 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 ataatagtaataaacaaaaa 69 |||||||||||||||||||| Sbjct: 30745 ataatagtaataaacaaaaa 30764
>gb|AC124987.9| Mus musculus chromosome 3, clone RP24-364E17, complete sequence Length = 165330 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 tcaaatcttcctccatcctt 202 |||||||||||||||||||| Sbjct: 73963 tcaaatcttcctccatcctt 73982
>gb|AY257538.1| Pseudomonas aeruginosa strain C plasmid pKLC102, complete sequence Length = 103532 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 540 gccgaaccggcggacggcgttgta 563 ||||||||||| |||||||||||| Sbjct: 60039 gccgaaccggccgacggcgttgta 60016
>gb|AC122052.4| Mus musculus BAC clone RP24-462O18 from chromosome 3, complete sequence Length = 171593 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 cttcctccatccttccttct 208 |||||||||||||||||||| Sbjct: 145755 cttcctccatccttccttct 145774
>gb|AC110379.3| Mus musculus BAC clone RP24-193N24 from 15, complete sequence Length = 139884 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 caatcatgagatcaaatctt 191 |||||||||||||||||||| Sbjct: 119170 caatcatgagatcaaatctt 119189
>gb|AC019028.13| Mus musculus chromosome 5, clone RP23-88A22, complete sequence Length = 264425 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 aaatcttcctccatccttcc 204 |||||||||||||||||||| Sbjct: 224212 aaatcttcctccatccttcc 224193
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 ctgccgtccgtgtagatgtc 431 |||||||||||||||||||| Sbjct: 2245873 ctgccgtccgtgtagatgtc 2245854
>emb|AL157787.11| Human DNA sequence from clone RP11-328K1 on chromosome 10, complete sequence Length = 102198 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 cttcctccatccttccttct 208 |||||||||||||||||||| Sbjct: 83746 cttcctccatccttccttct 83765
>emb|AL049538.9|HSJ1175I6 Human DNA sequence from clone RP5-1175I6 on chromosome 20 Contains the 3' end of the RIN2 gene for Ras and Rab interactor 2, the 5' end of the NAT5 gene for N-acetyltransferase 5 (ARD1 homolog, S. cerevisiae) and two CpG islands, complete sequence Length = 96276 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 agtataatagtaataaacaaaaaa 70 ||||||||| |||||||||||||| Sbjct: 61403 agtataataataataaacaaaaaa 61380
>gb|AC008534.7| Homo sapiens chromosome 5 clone CTC-484P3, complete sequence Length = 253402 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 agtataatagtaataaacaaaaaa 70 ||||||||||||||||| |||||| Sbjct: 236497 agtataatagtaataaataaaaaa 236520
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caacaaccaccagttttaca 24 |||||||||||||||||||| Sbjct: 4013273 caacaaccaccagttttaca 4013292
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 514 agccgcagcgtgtcgtaccgcacc 537 ||||||||||||||||| |||||| Sbjct: 4037883 agccgcagcgtgtcgtaacgcacc 4037906
>emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete genome; segment 15/16 Length = 343473 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 499 accaccttgtgcggcagccgcagc 522 ||||||||||||| |||||||||| Sbjct: 255618 accaccttgtgcgccagccgcagc 255641
>emb|BX640436.1| Bordetella parapertussis strain 12822, complete genome; segment 14/14 Length = 255260 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 499 accaccttgtgcggcagccgcagc 522 ||||||||||||| |||||||||| Sbjct: 46656 accaccttgtgcgccagccgcagc 46679
>emb|BX640422.1| Bordetella pertussis strain Tohama I, complete genome; segment 12/12 Length = 257701 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 499 accaccttgtgcggcagccgcagc 522 ||||||||||||| |||||||||| Sbjct: 109111 accaccttgtgcgccagccgcagc 109134
>emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete genome; segment 6/29 Length = 277000 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 387 ggcgtcgatgccctgcaccg 406 |||||||||||||||||||| Sbjct: 42176 ggcgtcgatgccctgcaccg 42195
>gb|AC160396.1| Pan troglodytes BAC clone CH251-354A6 from chromosome unknown, complete sequence Length = 161979 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 taatagtaataaacaaaaaa 70 |||||||||||||||||||| Sbjct: 61062 taatagtaataaacaaaaaa 61081
>gb|AC090149.6| Homo sapiens chromosome 8, clone RP11-429M12, complete sequence Length = 159476 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 ttcctccatccttccttctt 209 |||||||||||||||||||| Sbjct: 158004 ttcctccatccttccttctt 157985
>dbj|AP008932.1| Rhodococcus erythropolis PR4 plasmid pREC1, complete sequence Length = 104014 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 agcacagccccgccgtcacc 143 |||||||||||||||||||| Sbjct: 33452 agcacagccccgccgtcacc 33433
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 458 cgccctggccgaacttgacg 477 |||||||||||||||||||| Sbjct: 4829502 cgccctggccgaacttgacg 4829521
>gb|AC007518.32| Mus musculus chromosome , clone CT7-345D4, complete sequence Length = 193714 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 ataatagtaataaacaaaaa 69 |||||||||||||||||||| Sbjct: 109027 ataatagtaataaacaaaaa 109046
>gb|AC090575.11| Homo sapiens chromosome 8, clone RP11-480D6, complete sequence Length = 159531 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 ttcctccatccttccttctt 209 |||||||||||||||||||| Sbjct: 158001 ttcctccatccttccttctt 157982
>gb|AC148188.3| Saimiri boliviensis boliviensis clone CH254-64N20, complete sequence Length = 194092 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 ataatagtaataaacaaaaa 69 |||||||||||||||||||| Sbjct: 170400 ataatagtaataaacaaaaa 170419
>gb|AC037450.6| Homo sapiens chromosome 8, clone RP11-226G12, complete sequence Length = 169876 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 ttcctccatccttccttctt 209 |||||||||||||||||||| Sbjct: 58726 ttcctccatccttccttctt 58745
>gb|AC093917.3| Homo sapiens BAC clone RP11-800K23 from 4, complete sequence Length = 207691 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 agtataatagtaataaacaaaaaa 70 ||||||||| |||||||||||||| Sbjct: 40557 agtataataataataaacaaaaaa 40534
>gb|AC164109.2| Mus musculus BAC clone RP24-142E9 from chromosome 9, complete sequence Length = 147109 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 tcttcctccatccttccttc 207 |||||||||||||||||||| Sbjct: 27684 tcttcctccatccttccttc 27703
>gb|AC161419.2| Mus musculus BAC clone RP23-405I13 from chromosome 9, complete sequence Length = 213468 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 tcttcctccatccttccttc 207 |||||||||||||||||||| Sbjct: 31524 tcttcctccatccttccttc 31505
>gb|AY966424.1| Gliricola porcelli cytochrome oxidase subunit I (cox1) and cytochrome oxidase subunit III (cox3) genes, partial cds; mitochondrial Length = 1522 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 ataatagtaataaacaaaaa 69 |||||||||||||||||||| Sbjct: 1324 ataatagtaataaacaaaaa 1305
>gb|DP000030.1| Sus scrofa target 116 genomic scaffold Length = 380805 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 184 caaatcttcctccatccttccttc 207 ||||||||||||| |||||||||| Sbjct: 332405 caaatcttcctccttccttccttc 332382
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 481 ccgtcggcctccctcgccaccacc 504 |||||| ||||||||||||||||| Sbjct: 3940295 ccgtcgtcctccctcgccaccacc 3940318
>gb|AC141557.5| Homo sapiens 12 BAC CTD-2318O12 (Cal Tech Human BAC Library D) complete sequence Length = 18318 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 cttcctccatccttccttct 208 |||||||||||||||||||| Sbjct: 3860 cttcctccatccttccttct 3841
>emb|BX823236.1|CNS0A65G Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS15ZA05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1857 Score = 40.1 bits (20), Expect = 9.7 Identities = 35/40 (87%) Strand = Plus / Minus Query: 563 acatgctctcctccgtctggtactccgggatcatgtggta 602 ||||||| ||||||||||| ||||| || || |||||||| Sbjct: 1159 acatgctttcctccgtctgatactctggaataatgtggta 1120
>gb|AF391378.1| Amblygobius phalaena isolate 2 cytochrome c oxidase subunit I gene, partial cds; mitochondrial gene for mitochondrial product Length = 1551 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 tcttcctccatccttccttcttct 211 |||||| ||||||||||||||||| Sbjct: 309 tcttcccccatccttccttcttct 332
>gb|AF391372.1| Xenisthmus sp. CET-2001 cytochrome c oxidase subunit I gene, partial cds; mitochondrial gene for mitochondrial product Length = 1551 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 195 ccatccttccttcttctactggca 218 ||||||||||||||||| |||||| Sbjct: 316 ccatccttccttcttcttctggca 339
>gb|AF391367.1| Mogurnda adspersa cytochrome c oxidase subunit I gene, partial cds; mitochondrial gene for mitochondrial product Length = 1551 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 195 ccatccttccttcttctactggca 218 ||||||||||||||||| |||||| Sbjct: 316 ccatccttccttcttcttctggca 339
>gb|AC147103.3| Pan troglodytes BAC clone RP43-31L11 from chromosome 7, complete sequence Length = 222089 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 47 agtataatagtaataaacaaaaaa 70 ||||||||||||||||| |||||| Sbjct: 136790 agtataatagtaataaaaaaaaaa 136767
>gb|AC007380.3| Homo sapiens BAC clone RP11-150O13 from 2, complete sequence Length = 207362 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 agtataatagtaataaacaaaaaa 70 ||||||||||||||||| |||||| Sbjct: 89666 agtataatagtaataaataaaaaa 89689
>gb|AC009533.10| Homo sapiens 12 BAC RP11-22B23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 162572 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 cttcctccatccttccttct 208 |||||||||||||||||||| Sbjct: 64810 cttcctccatccttccttct 64829
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 cggcgtcgatgccctgcacc 405 |||||||||||||||||||| Sbjct: 5422037 cggcgtcgatgccctgcacc 5422018
>dbj|AP005829.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1008E06 Length = 170228 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 188 tcttcctccatccttccttcttct 211 ||||||||| |||||||||||||| Sbjct: 155069 tcttcctccttccttccttcttct 155046 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 188 tcttcctccatccttccttcttct 211 ||||||||| |||||||||||||| Sbjct: 146308 tcttcctccttccttccttcttct 146285
>dbj|AP005867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0599F09 Length = 157415 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 tcttcctccatccttccttc 207 |||||||||||||||||||| Sbjct: 124073 tcttcctccatccttccttc 124092
>dbj|AP004836.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0030G02 Length = 187265 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 481 ccgtcggcctccctcgccaccacc 504 |||||| ||||||||||||||||| Sbjct: 138766 ccgtcgtcctccctcgccaccacc 138789
>emb|BX324200.5| Mouse DNA sequence from clone RP23-382H2 on chromosome 2, complete sequence Length = 180530 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 cttcctccatccttccttct 208 |||||||||||||||||||| Sbjct: 171968 cttcctccatccttccttct 171949
>emb|X54482.1|SFVGENOME Simian foamy virus type 1 complete genome Length = 12972 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 583 tactccgggatcatgtggta 602 |||||||||||||||||||| Sbjct: 8841 tactccgggatcatgtggta 8860
>emb|AJ337696.1|HSA337696 Homo sapiens genomic sequence surrounding NotI site, clone NR1-OO19R Length = 742 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 478 gagccgtcggcctccctcgc 497 |||||||||||||||||||| Sbjct: 227 gagccgtcggcctccctcgc 246
>gb|AC154846.2| Mus musculus BAC clone RP23-45E1 from 14, complete sequence Length = 250542 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 caaatcttcctccatccttc 203 |||||||||||||||||||| Sbjct: 101590 caaatcttcctccatccttc 101609
>dbj|AK063538.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-C03, full insert sequence Length = 1705 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 188 tcttcctccatccttccttcttct 211 ||||||||| |||||||||||||| Sbjct: 405 tcttcctccttccttccttcttct 382
>emb|AJ544610.1|TRU544610 Takifugu rubripes dmd gene for putative dystrophin, exons 21-34 Length = 20816 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 tcttcctccatccttccttc 207 |||||||||||||||||||| Sbjct: 5498 tcttcctccatccttccttc 5479
>gb|AC164438.3| Mus musculus BAC clone RP23-62L19 from chromosome 9, complete sequence Length = 205793 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 ttcctccatccttccttctt 209 |||||||||||||||||||| Sbjct: 122009 ttcctccatccttccttctt 121990
>dbj|AB241052.1| Distoechurus pennatus mitochondrial DNA, complete genome Length = 16775 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 cttcctccatccttccttct 208 |||||||||||||||||||| Sbjct: 5684 cttcctccatccttccttct 5703
>gb|AC120163.10| Mus musculus chromosome 15, clone RP24-466O11, complete sequence Length = 129237 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 caatcatgagatcaaatctt 191 |||||||||||||||||||| Sbjct: 70112 caatcatgagatcaaatctt 70093
>emb|AL450397.19| Mouse DNA sequence from clone RP23-100G16 on chromosome X, complete sequence Length = 228645 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 tcttcctccatccttccttc 207 |||||||||||||||||||| Sbjct: 138759 tcttcctccatccttccttc 138740
>gb|M33561.1|SMFPOLENV Simian foamy virus type 1 polymerase (pol) gene, 3' end; and envelope (env) gene, complete cds Length = 3534 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 583 tactccgggatcatgtggta 602 |||||||||||||||||||| Sbjct: 2346 tactccgggatcatgtggta 2365
>dbj|AB021880.1| Balanus amphitrite bcs-5 mRNA, complete cds Length = 3030 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 364 ttgtcgtcctccgggagcagcacg 387 |||||||||||| ||||||||||| Sbjct: 638 ttgtcgtcctcccggagcagcacg 615 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,980,670 Number of Sequences: 3902068 Number of extensions: 4980670 Number of successful extensions: 119153 Number of sequences better than 10.0: 132 Number of HSP's better than 10.0 without gapping: 135 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 117978 Number of HSP's gapped (non-prelim): 1120 length of query: 710 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 687 effective length of database: 17,143,297,704 effective search space: 11777445522648 effective search space used: 11777445522648 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)