ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd16m07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_186811.1| Oryza sativa (japonica cultivar-group), mRNA 72 2e-09
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
3dbj|AP003754.5| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
4dbj|AP004382.2| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
5ref|XM_477431.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.009
6dbj|AP005104.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.009
7dbj|AP004268.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.035
8dbj|AP005106.6| Oryza sativa (japonica cultivar-group) genomic D... 48 0.035
9ref|NM_194096.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.14
10dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.14
11emb|CR450845.14| Zebrafish DNA sequence from clone DKEY-63K7 in ... 46 0.14
12gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 46 0.14
13emb|AL831808.4|CNS08CAL Oryza sativa chromosome 12, . BAC OSJNBa... 46 0.14
14gb|AC136218.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.55
15gb|AC120987.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.55
16emb|CR933104.2| Medicago truncatula chromosome 5 clone mth2-25b3... 44 0.55
17gb|AC139882.29| Medicago truncatula clone mth2-32f21, complete s... 44 0.55
18dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.55
19gb|AC092567.4| Homo sapiens BAC clone CTD-2010B19 from 2, comple... 44 0.55
20emb|CT030177.6| M.truncatula DNA sequence from clone MTH2-154J16... 44 0.55
21ref|XM_629316.1| Dictyostelium discoideum hypothetical protein (... 42 2.2
22gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, c... 42 2.2
23ref|XM_842821.1| Leishmania major strain Friedlin protein kinase... 42 2.2
24gb|AC118245.17| Mus musculus chromosome 6, clone RP23-292C5, com... 42 2.2
25dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
26dbj|AP007204.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
27ref|NM_185295.2| Oryza sativa (japonica cultivar-group), mRNA 40 8.6
28gb|AC166351.1| Mus musculus BAC clone RP24-224C7 from chromosome... 40 8.6
29emb|AL450163.12| Human DNA sequence from clone RP11-384L19 on ch... 40 8.6
30gb|AC117459.6| Homo sapiens 3 BAC RP11-343L17 (Roswell Park Canc... 40 8.6
31gb|AC134177.1| Drosophila pseudoobscura FOSMID DPSF1-548A1 (Chi... 40 8.6
32gb|AF168771.1| Betula pendula sucrose transport protein (SUC1) g... 40 8.6
33gb|AC091201.4| Drosophila melanogaster 3L BAC RP98-47H5 (Roswell... 40 8.6
34emb|BX537135.9| Zebrafish DNA sequence from clone DKEY-57B1 in l... 40 8.6
35gb|AC069185.7| Homo sapiens chromosome 8, clone RP11-297N6, comp... 40 8.6
36gb|AC064875.5| Homo sapiens BAC clone RP11-707E12 from 2, comple... 40 8.6
37gb|AC154544.2| Mus musculus BAC clone RP23-228G19 from chromosom... 40 8.6
38gb|AC079644.9|AC079644 Mus musculus 12 BAC RP23-174O6 (Roswell P... 40 8.6
39dbj|AP005475.4| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
40emb|AL929222.6| Zebrafish DNA sequence from clone DKEY-31N5, com... 40 8.6
41dbj|AK073171.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.6
42gb|AE003566.3| Drosophila melanogaster chromosome 3L, section 19... 40 8.6 
>ref|NM_186811.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1350

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                   
Query: 504 gatatacaacttctccaagcagggaaagcaactcatgagatcaataaccatatcca 559
           ||||||||||||||||||| |||||||||| |||||||  |||||| |||||||||
Sbjct: 981 gatatacaacttctccaaggagggaaagcatctcatgaagtcaatagccatatcca 926
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                       
Query: 504     gatatacaacttctccaagcagggaaagcaactcatgagatcaataaccatatcca 559
               ||||||||||||||||||| |||||||||| |||||||  |||||| |||||||||
Sbjct: 7983856 gatatacaacttctccaaggagggaaagcatctcatgaagtcaatagccatatcca 7983801



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                                 
Query: 410      ccaacactactttcttgagacggatgtcaaggc 442
                ||||||||||| |||||||||| ||||||||||
Sbjct: 10467760 ccaacactactgtcttgagacgaatgtcaaggc 10467728



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                        
Query: 507      atacaacttctccaagcagggaaa 530
                ||||||||||||||||||||||||
Sbjct: 11058770 atacaacttctccaagcagggaaa 11058793



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 508      tacaacttctccaagcagggaaa 530
                |||||||||||||||||||||||
Sbjct: 11066304 tacaacttctccaagcagggaaa 11066326



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 507      atacaacttctccaagcagg 526
                ||||||||||||||||||||
Sbjct: 11042826 atacaacttctccaagcagg 11042845



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 505      atatacaacttctccaagcagggaaagcaact 536
                ||||||| | ||||||||||||| ||||||||
Sbjct: 10986857 atatacagcctctccaagcaggggaagcaact 10986888



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 508      tacaacttctccaagcagggaaagcaactcat 539
                ||||| ||||||||||| ||||||||| ||||
Sbjct: 10359642 tacaatttctccaagcatggaaagcaaatcat 10359673
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>dbj|AP003754.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1341_A08
          Length = 128955

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                     
Query: 504   gatatacaacttctccaagcagggaaagcaactcatgagatcaataaccatatcca 559
             ||||||||||||||||||| |||||||||| |||||||  |||||| |||||||||
Sbjct: 22053 gatatacaacttctccaaggagggaaagcatctcatgaagtcaatagccatatcca 21998
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>dbj|AP004382.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0418E08
          Length = 141040

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                      
Query: 504    gatatacaacttctccaagcagggaaagcaactcatgagatcaataaccatatcca 559
              ||||||||||||||||||| |||||||||| |||||||  |||||| |||||||||
Sbjct: 100215 gatatacaacttctccaaggagggaaagcatctcatgaagtcaatagccatatcca 100160
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>ref|XM_477431.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1014

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 410 ccaacactactttcttgagacggatgtcaaggc 442
           ||||||||||| |||||||||| ||||||||||
Sbjct: 709 ccaacactactgtcttgagacgaatgtcaaggc 677
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>dbj|AP005104.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0042E08
          Length = 166257

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                              
Query: 410   ccaacactactttcttgagacggatgtcaaggc 442
             ||||||||||| |||||||||| ||||||||||
Sbjct: 19089 ccaacactactgtcttgagacgaatgtcaaggc 19057
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>dbj|AP004268.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0045F02
          Length = 143668

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 507   atacaacttctccaagcagggaaa 530
             ||||||||||||||||||||||||
Sbjct: 41289 atacaacttctccaagcagggaaa 41312



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 508   tacaacttctccaagcagggaaa 530
             |||||||||||||||||||||||
Sbjct: 48823 tacaacttctccaagcagggaaa 48845



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 507   atacaacttctccaagcagg 526
             ||||||||||||||||||||
Sbjct: 25345 atacaacttctccaagcagg 25364
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>dbj|AP005106.6| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBb0091I19
          Length = 126544

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 507    atacaacttctccaagcagggaaa 530
              ||||||||||||||||||||||||
Sbjct: 120713 atacaacttctccaagcagggaaa 120736



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 507    atacaacttctccaagcagg 526
              ||||||||||||||||||||
Sbjct: 104769 atacaacttctccaagcagg 104788



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 505   atatacaacttctccaagcagggaaagcaact 536
             ||||||| | ||||||||||||| ||||||||
Sbjct: 48800 atatacagcctctccaagcaggggaagcaact 48831
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>ref|NM_194096.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1494

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 508  tacaacttctccaagcagggaaa 530
            |||||||||||||||||||||||
Sbjct: 1121 tacaacttctccaagcagggaaa 1099
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                       
Query: 144      tcaacatcagcattcaaagggatcagctacagacaaatc 182
                |||||||| |||||||||||||||||  | |||||||||
Sbjct: 18891945 tcaacatctgcattcaaagggatcagtaaaagacaaatc 18891983



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 508      tacaacttctccaagcagggaaagcaactcat 539
                ||||| ||||||||||| |||||||| |||||
Sbjct: 18892423 tacaatttctccaagcatggaaagcatctcat 18892454
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>emb|CR450845.14| Zebrafish DNA sequence from clone DKEY-63K7 in linkage group 2,
            complete sequence
          Length = 232604

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 345  cattttagcattcaacacaaaga 367
            |||||||||||||||||||||||
Sbjct: 5451 cattttagcattcaacacaaaga 5473
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                       
Query: 144      tcaacatcagcattcaaagggatcagctacagacaaatc 182
                |||||||| |||||||||||||||||  | |||||||||
Sbjct: 18818172 tcaacatctgcattcaaagggatcagtaaaagacaaatc 18818210



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 508      tacaacttctccaagcagggaaagcaactcat 539
                ||||| ||||||||||| |||||||| |||||
Sbjct: 18818650 tacaatttctccaagcatggaaagcatctcat 18818681
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>emb|AL831808.4|CNS08CAL Oryza sativa chromosome 12, . BAC OSJNBa0028H02 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 153064

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                    
Query: 144   tcaacatcagcattcaaagggatcagctacagacaaatc 182
             |||||||| |||||||||||||||||  | |||||||||
Sbjct: 78434 tcaacatctgcattcaaagggatcagtaaaagacaaatc 78396



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 508   tacaacttctccaagcagggaaagcaactcat 539
             ||||| ||||||||||| |||||||| |||||
Sbjct: 77956 tacaatttctccaagcatggaaagcatctcat 77925
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>gb|AC136218.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0039A21, complete sequence
          Length = 139074

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 564   cagaggacgaacagagatagat 585
             ||||||||||||||||||||||
Sbjct: 70133 cagaggacgaacagagatagat 70112
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>gb|AC120987.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0007A06,
              complete sequence
          Length = 148029

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 564    cagaggacgaacagagatagat 585
              ||||||||||||||||||||||
Sbjct: 138205 cagaggacgaacagagatagat 138184
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>emb|CR933104.2| Medicago truncatula chromosome 5 clone mth2-25b3, COMPLETE SEQUENCE
          Length = 117135

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 50   cttcaaaacatcagaaacaagagaac 75
            ||||||| ||||||||||||||||||
Sbjct: 5430 cttcaaaccatcagaaacaagagaac 5455
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>gb|AC139882.29| Medicago truncatula clone mth2-32f21, complete sequence
          Length = 115770

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 50    cttcaaaacatcagaaacaagagaac 75
             ||||||| ||||||||||||||||||
Sbjct: 64390 cttcaaaccatcagaaacaagagaac 64415
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 564      cagaggacgaacagagatagat 585
                ||||||||||||||||||||||
Sbjct: 18102878 cagaggacgaacagagatagat 18102857
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>gb|AC092567.4| Homo sapiens BAC clone CTD-2010B19 from 2, complete sequence
          Length = 163496

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 59    atcagaaacaagagaaccaatcaaat 84
             ||||||||||||||||||||| ||||
Sbjct: 92331 atcagaaacaagagaaccaataaaat 92306
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>emb|CT030177.6| M.truncatula DNA sequence from clone MTH2-154J16 on chromosome 3,
             complete sequence
          Length = 126881

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 50    cttcaaaacatcagaaacaagagaac 75
             ||||||| ||||||||||||||||||
Sbjct: 88832 cttcaaaccatcagaaacaagagaac 88807
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>ref|XM_629316.1| Dictyostelium discoideum hypothetical protein (DDB0219821), partial
            mRNA
          Length = 3810

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 54   aaaacatcagaaacaagagaaccaa 78
            |||||||||||||||||| ||||||
Sbjct: 3067 aaaacatcagaaacaagacaaccaa 3091
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>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence
          Length = 1212674

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 281     tgcgctgcctttcaatgaact 301
               |||||||||||||||||||||
Sbjct: 1080768 tgcgctgcctttcaatgaact 1080748
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>ref|XM_842821.1| Leishmania major strain Friedlin protein kinase (LMJ_0892) partial
           mRNA
          Length = 1356

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 281 tgcgctgcctttcaatgaact 301
           |||||||||||||||||||||
Sbjct: 784 tgcgctgcctttcaatgaact 764
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>gb|AC118245.17| Mus musculus chromosome 6, clone RP23-292C5, complete sequence
          Length = 230218

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 48     aacttcaaaacatcagaaaca 68
              |||||||||||||||||||||
Sbjct: 142897 aacttcaaaacatcagaaaca 142917
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 85       tggatcggaaaaatgtgacga 105
                |||||||||||||||||||||
Sbjct: 11539967 tggatcggaaaaatgtgacga 11539947
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>dbj|AP007204.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0008D05
          Length = 134776

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 85    tggatcggaaaaatgtgacga 105
             |||||||||||||||||||||
Sbjct: 46974 tggatcggaaaaatgtgacga 46954
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>ref|NM_185295.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1616

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 505  atatacaacttctccaagcagggaaagcaact 536
            ||||||| | ||||||||||||| ||||||||
Sbjct: 1101 atatacagcctctccaagcaggggaagcaact 1070
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>gb|AC166351.1| Mus musculus BAC clone RP24-224C7 from chromosome 17, complete sequence
          Length = 162550

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 585    taaagtcttgacagtgtgta 604
              ||||||||||||||||||||
Sbjct: 117078 taaagtcttgacagtgtgta 117059
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>emb|AL450163.12| Human DNA sequence from clone RP11-384L19 on chromosome 1 Contains part
              of the gene for C-terminal PDZ domain ligand of neuronal
              nitric oxide synthase (CAPON), complete sequence
          Length = 208408

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 403    taacttgccaacactacttt 422
              ||||||||||||||||||||
Sbjct: 141420 taacttgccaacactacttt 141439
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>gb|AC117459.6| Homo sapiens 3 BAC RP11-343L17 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 153618

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 537   catgagatcaataaccatat 556
             ||||||||||||||||||||
Sbjct: 84198 catgagatcaataaccatat 84217
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>gb|AC134177.1| Drosophila pseudoobscura  FOSMID DPSF1-548A1 (Children's Hospital
             Oakland Research Institute Drosophila pseudoobscura FOSMID
             Library) complete sequence
          Length = 46224

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 355   ttcaacacaaagagcatggcaaaa 378
             ||||||||| ||||||||||||||
Sbjct: 32925 ttcaacacagagagcatggcaaaa 32948
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>gb|AF168771.1| Betula pendula sucrose transport protein (SUC1) gene, partial cds
          Length = 789

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 473 acaaattctttccccgcaac 492
           ||||||||||||||||||||
Sbjct: 628 acaaattctttccccgcaac 647
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>gb|AC091201.4| Drosophila melanogaster 3L BAC RP98-47H5 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 187000

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 367    agcatggcaaaattaatttg 386
              ||||||||||||||||||||
Sbjct: 108815 agcatggcaaaattaatttg 108834
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>emb|BX537135.9| Zebrafish DNA sequence from clone DKEY-57B1 in linkage group 14, complete
              sequence
          Length = 108341

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 368    gcatggcaaaattaatttgt 387
              ||||||||||||||||||||
Sbjct: 103769 gcatggcaaaattaatttgt 103788
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>gb|AC069185.7| Homo sapiens chromosome 8, clone RP11-297N6, complete sequence
          Length = 169079

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 131   aggaaactcaatatcaacat 150
             ||||||||||||||||||||
Sbjct: 51157 aggaaactcaatatcaacat 51138
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>gb|AC064875.5| Homo sapiens BAC clone RP11-707E12 from 2, complete sequence
          Length = 161676

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 517   tccaagcagggaaagcaact 536
             ||||||||||||||||||||
Sbjct: 12015 tccaagcagggaaagcaact 11996
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>gb|AC154544.2| Mus musculus BAC clone RP23-228G19 from chromosome 17, complete
             sequence
          Length = 183626

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 585   taaagtcttgacagtgtgta 604
             ||||||||||||||||||||
Sbjct: 35427 taaagtcttgacagtgtgta 35408
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>gb|AC079644.9|AC079644 Mus musculus 12 BAC RP23-174O6 (Roswell Park Cancer Institute Mouse BAC
             Library) complete sequence
          Length = 204394

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 522   gcagggaaagcaactcatga 541
             ||||||||||||||||||||
Sbjct: 74928 gcagggaaagcaactcatga 74947
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>dbj|AP005475.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0091L05
          Length = 173983

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 508   tacaacttctccaagcagggaaagcaactcat 539
             ||||| ||||||||||| ||||||||| ||||
Sbjct: 70822 tacaatttctccaagcatggaaagcaaatcat 70853
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>emb|AL929222.6| Zebrafish DNA sequence from clone DKEY-31N5, complete sequence
          Length = 212599

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 345  cattttagcattcaacacaa 364
            ||||||||||||||||||||
Sbjct: 8514 cattttagcattcaacacaa 8495
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>dbj|AK073171.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033022I08, full
            insert sequence
          Length = 1617

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 505  atatacaacttctccaagcagggaaagcaact 536
            ||||||| | ||||||||||||| ||||||||
Sbjct: 1101 atatacagcctctccaagcaggggaagcaact 1070
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>gb|AE003566.3| Drosophila melanogaster chromosome 3L, section 19 of 83 of the complete
              sequence
          Length = 251457

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 367    agcatggcaaaattaatttg 386
              ||||||||||||||||||||
Sbjct: 149305 agcatggcaaaattaatttg 149324


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,831,824
Number of Sequences: 3902068
Number of extensions: 5831824
Number of successful extensions: 106321
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 106059
Number of HSP's gapped (non-prelim): 262
length of query: 634
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 611
effective length of database: 17,143,297,704
effective search space: 10474554897144
effective search space used: 10474554897144
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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