>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  131 bits (66), Expect = 3e-27
 Identities = 197/240 (82%), Gaps = 3/240 (1%)
 Strand = Plus / Plus

                                                                            
Query: 401      gacgccgcgccgcatgatcgcgacaagcagacgcgctgtgttgagcgcgtcatccagccc 460
                ||||||||| |||| || | |||| || || ||||| ||||||   ||||| || || ||
Sbjct: 24572240 gacgccgcggcgcaagagctcgacgaggaggcgcgccgtgttgcaggcgtcgtcgaggcc 24572299

                                                                            
Query: 461      gcagtgcaggcggccctcccagtccagccccgccgcccggaccgcctcctgcaggttcac 520
                |||||||||||| ||| |||| |||||||||||||||| ||||||||||||||| |||||
Sbjct: 24572300 gcagtgcaggcgccccacccactccagccccgccgccctgaccgcctcctgcagcttcac 24572359

                                                                            
Query: 521      cc---gccctccgccgccgaacgctgcctggaaggggaccctcagatttatccactgatc 577
                ||   |||| |||||||||||||| |||| |||| ||||||| || |  | |||| | ||
Sbjct: 24572360 ccgctgcccgccgccgccgaacgccgcctcgaagtggaccctgaggtcgacccaccggtc 24572419

                                                                            
Query: 578      aaagtaggagggcttctcgatgcccttgaagcggcactcaaactcgagcatggtacggca 637
                 |||||||  |||||| ||||||||||||| ||||||||   ||| |||||||| |||||
Sbjct: 24572420 gaagtaggccggcttcgcgatgcccttgaaccggcactcctgctccagcatggtgcggca 24572479

>dbj|AP002897.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0686E09
          Length = 156425

 Score =  131 bits (66), Expect = 3e-27
 Identities = 197/240 (82%), Gaps = 3/240 (1%)
 Strand = Plus / Plus

                                                                          
Query: 401    gacgccgcgccgcatgatcgcgacaagcagacgcgctgtgttgagcgcgtcatccagccc 460
              ||||||||| |||| || | |||| || || ||||| ||||||   ||||| || || ||
Sbjct: 152624 gacgccgcggcgcaagagctcgacgaggaggcgcgccgtgttgcaggcgtcgtcgaggcc 152683

                                                                          
Query: 461    gcagtgcaggcggccctcccagtccagccccgccgcccggaccgcctcctgcaggttcac 520
              |||||||||||| ||| |||| |||||||||||||||| ||||||||||||||| |||||
Sbjct: 152684 gcagtgcaggcgccccacccactccagccccgccgccctgaccgcctcctgcagcttcac 152743

                                                                          
Query: 521    cc---gccctccgccgccgaacgctgcctggaaggggaccctcagatttatccactgatc 577
              ||   |||| |||||||||||||| |||| |||| ||||||| || |  | |||| | ||
Sbjct: 152744 ccgctgcccgccgccgccgaacgccgcctcgaagtggaccctgaggtcgacccaccggtc 152803

                                                                          
Query: 578    aaagtaggagggcttctcgatgcccttgaagcggcactcaaactcgagcatggtacggca 637
               |||||||  |||||| ||||||||||||| ||||||||   ||| |||||||| |||||
Sbjct: 152804 gaagtaggccggcttcgcgatgcccttgaaccggcactcctgctccagcatggtgcggca 152863

>dbj|AK064632.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-H01, full
           insert sequence
          Length = 1134

 Score =  131 bits (66), Expect = 3e-27
 Identities = 197/240 (82%), Gaps = 3/240 (1%)
 Strand = Plus / Minus

                                                                       
Query: 401 gacgccgcgccgcatgatcgcgacaagcagacgcgctgtgttgagcgcgtcatccagccc 460
           ||||||||| |||| || | |||| || || ||||| ||||||   ||||| || || ||
Sbjct: 731 gacgccgcggcgcaagagctcgacgaggaggcgcgccgtgttgcaggcgtcgtcgaggcc 672

                                                                       
Query: 461 gcagtgcaggcggccctcccagtccagccccgccgcccggaccgcctcctgcaggttcac 520
           |||||||||||| ||| |||| |||||||||||||||| ||||||||||||||| |||||
Sbjct: 671 gcagtgcaggcgccccacccactccagccccgccgccctgaccgcctcctgcagcttcac 612

                                                                       
Query: 521 cc---gccctccgccgccgaacgctgcctggaaggggaccctcagatttatccactgatc 577
           ||   |||| |||||||||||||| |||| |||| ||||||| || |  | |||| | ||
Sbjct: 611 ccgctgcccgccgccgccgaacgccgcctcgaagtggaccctgaggtcgacccaccggtc 552

                                                                       
Query: 578 aaagtaggagggcttctcgatgcccttgaagcggcactcaaactcgagcatggtacggca 637
            |||||||  |||||| ||||||||||||| ||||||||   ||| |||||||| |||||
Sbjct: 551 gaagtaggccggcttcgcgatgcccttgaaccggcactcctgctccagcatggtgcggca 492

>ref|XM_417371.1| PREDICTED: Gallus gallus similar to WNT1 inducible signaling pathway
            protein 2 precursor (WISP-2) (Connective tissue growth
            factor-like protein) (CTGF-L) (Connective tissue growth
            factor-related protein 58) (UNQ228/PRO261) (LOC419193),
            mRNA
          Length = 2054

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 336  ggctgtggctgctgcaggatcggcgcc 362
            ||||||||||||||||||||| |||||
Sbjct: 1309 ggctgtggctgctgcaggatctgcgcc 1335

>emb|BX255972.1| Human DNA sequence from clone RP11-375E1 on chromosome 6 Contains the
             RPS10 gene for ribosomal protein S10, the PACSIN1 gene for
             protein kinase C and casein kinase substrate in neurons 1
             (KIAA1379), the 3' end of the gene for prostrate
             epithelium specific Ets transcription factor (PDEF) (PSE)
             and three CpG islands, complete sequence
          Length = 124524

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 167   ctcctgccatggatccttggttcagttgctc 197
             |||||||| |||| |||||||||||||||||
Sbjct: 72017 ctcctgccttggagccttggttcagttgctc 72047

>emb|AL157372.18| Human DNA sequence from clone RP11-375E1 on chromosome 6, complete
             sequence
          Length = 150660

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 167   ctcctgccatggatccttggttcagttgctc 197
             |||||||| |||| |||||||||||||||||
Sbjct: 72017 ctcctgccttggagccttggttcagttgctc 72047

>gb|AY330485.1| Saccharopolyspora erythraea amino acid permease gene, partial cds;
             transport protein, helix-turn-helix regulator (pkeRI),
             P450 monooxygenase (pkePI), P450 monooxygenase (pkePII),
             P450 monooxygenase (pkePIII), type I PKS (pkeAI), type I
             PKS (pkeAII), and type I PKS (pkeAIII) genes, complete
             cds; pkeAIV gene, complete sequence; type I PKS,
             monooxygenases, transporter, ketoacyl-ACP synthase
             (typeII), acyl carrier protien, amino transferase, and
             DNA-binding protein genes, complete cds; and unknown genes
          Length = 68451

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 490   ccgccgcccggaccgcctcctg 511
             ||||||||||||||||||||||
Sbjct: 19765 ccgccgcccggaccgcctcctg 19744

>ref|XM_966565.1| PREDICTED: Tribolium castaneum similar to CG32577-PA (LOC660322),
            mRNA
          Length = 4437

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 469  ggcggccctcccagtccagccc 490
            ||||||||||||||||||||||
Sbjct: 2500 ggcggccctcccagtccagccc 2521

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 590     cttctcgatgcccttgaagcgg 611
               ||||||||||||||||||||||
Sbjct: 7416997 cttctcgatgcccttgaagcgg 7417018

>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 349    gcaggatcggcgccgatagcg 369
              |||||||||||||||||||||
Sbjct: 520596 gcaggatcggcgccgatagcg 520616

>gb|AC073655.26| Homo sapiens 12 BAC RP11-1105G2 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 188105

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 471   cggccctcccagtccagcccc 491
             |||||||||||||||||||||
Sbjct: 39410 cggccctcccagtccagcccc 39430

>gb|AC091776.19| Chlamydomonas reinhardtii clone cr-4i21, complete sequence
          Length = 48498

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 484   ccagccccgccgcccggaccgcctc 508
             |||||||||||||||| ||||||||
Sbjct: 26533 ccagccccgccgcccgcaccgcctc 26557

>gb|AC090435.28| Chlamydomonas reinhardtii clone cr-32m22, complete sequence
          Length = 79677

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 484  ccagccccgccgcccggaccgcctc 508
            |||||||||||||||| ||||||||
Sbjct: 5247 ccagccccgccgcccgcaccgcctc 5271

>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 590    cttctcgatgcccttgaagcg 610
              |||||||||||||||||||||
Sbjct: 819423 cttctcgatgcccttgaagcg 819443

>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome
          Length = 3730232

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 495    gcccggaccgcctcctgcag 514
              ||||||||||||||||||||
Sbjct: 981702 gcccggaccgcctcctgcag 981683

>gb|U20246.1|DNAVRL01 Dichelobacter nodosus strain A198 vrl gene locus, complete sequence
          Length = 28106

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 495  gcccggaccgcctcctgcag 514
            ||||||||||||||||||||
Sbjct: 5658 gcccggaccgcctcctgcag 5639

>ref|XM_588091.2| PREDICTED: Bos taurus similar to family with sequence similarity 19
           (chemokine (C-C motif)-like), member A3 isoform 1
           (LOC510868), mRNA
          Length = 909

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 500 gaccgcctcctgcaggttca 519
           ||||||||||||||||||||
Sbjct: 891 gaccgcctcctgcaggttca 872

>gb|AC124954.14| Medicago truncatula clone mth2-10g9, complete sequence
          Length = 115040

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 147   agtatgttctgaatctaagt 166
             ||||||||||||||||||||
Sbjct: 70057 agtatgttctgaatctaagt 70038

>emb|Z82244.1|HS286B10 Human DNA sequence from clone CTA-286B10 on chromosome 22, complete
             sequence
          Length = 87869

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 483   tccagccccgccgcccggac 502
             ||||||||||||||||||||
Sbjct: 57469 tccagccccgccgcccggac 57450

>emb|AL049651.2|HSJ753D10 Human DNA sequence from clone RP4-753D10 on chromosome 20 Contains the
             SSTR4 gene for somatostatin receptor 4, the THBD gene for
             thrombomodulin, two novel genes and two CpG islands,
             complete sequence
          Length = 97912

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 328   tcatgtgaggctgtggctgc 347
             ||||||||||||||||||||
Sbjct: 59944 tcatgtgaggctgtggctgc 59925

>gb|AC010198.8| Homo sapiens 12p11-37.2-54.4 BAC RP11-77I22 (Roswell Park Cancer
             Institute Human BAC Library) complete sequence
          Length = 199070

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 334   gaggctgtggctgctgcagg 353
             ||||||||||||||||||||
Sbjct: 42074 gaggctgtggctgctgcagg 42055

>gb|AC020763.6| Homo sapiens chromosome 16 clone RP11-394B2, complete sequence
          Length = 200838

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 334   gaggctgtggctgctgcagg 353
             ||||||||||||||||||||
Sbjct: 92108 gaggctgtggctgctgcagg 92089

>gb|AY212028.1| Homo sapiens MCM5 minichromosome maintenance deficient 5, cell
           division cycle 46 (S. cerevisiae) (MCM5) gene, complete
           cds
          Length = 26675

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 483 tccagccccgccgcccggac 502
           ||||||||||||||||||||
Sbjct: 780 tccagccccgccgcccggac 761

>dbj|AB003469.1| Homo sapiens HsMCM5 gene, 5'flanking region
          Length = 646

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 483 tccagccccgccgcccggac 502
           ||||||||||||||||||||
Sbjct: 516 tccagccccgccgcccggac 497

>gb|AF146282.1|AF146282 Soil-borne rye mosaic virus strain G  RNA2 20K protein, 84K protein,
            and 18K protein genes, complete cds
          Length = 3673

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 330  atgtgaggctgtggctgctg 349
            ||||||||||||||||||||
Sbjct: 1327 atgtgaggctgtggctgctg 1346

>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 359    cgccgatagcggcggcgcca 378
              ||||||||||||||||||||
Sbjct: 245297 cgccgatagcggcggcgcca 245316

>dbj|AP005019.1| Homo sapiens genomic DNA, chromosome 11q clone:RP11-169D4, complete
            sequences
          Length = 98501

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 335  aggctgtggctgctgcagga 354
            ||||||||||||||||||||
Sbjct: 9424 aggctgtggctgctgcagga 9443


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,216,822
Number of Sequences: 3902068
Number of extensions: 4216822
Number of successful extensions: 78352
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77901
Number of HSP's gapped (non-prelim): 445
length of query: 653
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 630
effective length of database: 17,143,297,704
effective search space: 10800277553520
effective search space used: 10800277553520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)