Clone Name | rbasd17b03 |
---|---|
Clone Library Name | barley_pub |
>HTF4_RAT (P51514) Transcription factor 12 (Transcription factor HTF-4)| (E-box-binding protein) (Salivary-specific cAMP response element-binding protein alpha) (SCBP alpha) (DNA-binding protein HTF4) Length = 707 Score = 32.7 bits (73), Expect = 0.96 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 4/68 (5%) Frame = +3 Query: 99 PLGSVNDRHRGKNQTTKLLCCQILGTHSPTSVRLN----KLSTCTRRSSRFPENRTSASE 266 P+G++N + G + T ++GTH SV LN LS+ S+ ++T S Sbjct: 468 PIGNLNSNYGGSSLVTNSRSASMVGTHREDSVSLNGNHSVLSSTVAASNTELNHKTPESF 527 Query: 267 RGVTPGQS 290 RG QS Sbjct: 528 RGGVQNQS 535
>HTF4_HUMAN (Q99081) Transcription factor 12 (Transcription factor HTF-4)| (E-box-binding protein) (DNA-binding protein HTF4) Length = 682 Score = 32.3 bits (72), Expect = 1.3 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 4/68 (5%) Frame = +3 Query: 99 PLGSVNDRHRGKNQTTKLLCCQILGTHSPTSVRLN----KLSTCTRRSSRFPENRTSASE 266 P+GS+N + G + ++GTH SV LN LS+ SS ++T + Sbjct: 443 PIGSLNSNYGGSSLVASSRSASMVGTHREDSVSLNGNHSVLSSTVTTSSTDLNHKTQENY 502 Query: 267 RGVTPGQS 290 RG QS Sbjct: 503 RGGLQSQS 510
>HTF4_MESAU (Q60420) Transcription factor 12 (Transcription factor HTF-4)| (E-box-binding protein) (DNA-binding protein HTF4) (Beta-cell E-box transcriptional activator 1) (BETA1) (Fragment) Length = 437 Score = 32.0 bits (71), Expect = 1.6 Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 4/68 (5%) Frame = +3 Query: 99 PLGSVNDRHRGKNQTTKLLCCQILGTHSPTSVRLN----KLSTCTRRSSRFPENRTSASE 266 P+G++N + G + T ++GTH SV LN LS+ S+ ++T + Sbjct: 198 PIGNLNSNYGGSSLVTNSRSASMVGTHREDSVNLNGNHSVLSSTVAASNTDLNHKTPENY 257 Query: 267 RGVTPGQS 290 RG QS Sbjct: 258 RGGLQNQS 265
>SIR4_YEAST (P11978) Regulatory protein SIR4 (Silent information regulator 4)| Length = 1358 Score = 31.2 bits (69), Expect = 2.8 Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 8/82 (9%) Frame = +3 Query: 45 NDSENFARQHSPN-FQGGRPLGSVNDRH-------RGKNQTTKLLCCQILGTHSPTSVRL 200 N S +F+R S F G+ + V DR N T L +LGTHS T + Sbjct: 1180 NISLSFSRPASYGYFSVGKRVPIVEDRRVKQLDDITDSNTTEILTSVDVLGTHSQTGTQQ 1239 Query: 201 NKLSTCTRRSSRFPENRTSASE 266 + + T T+++ +N+ S +E Sbjct: 1240 SNMYTSTQKTELEIDNKDSVTE 1261
>AMPM_BUCAP (Q8K9T1) Methionine aminopeptidase (EC 3.4.11.18) (MAP) (Peptidase| M) Length = 261 Score = 30.8 bits (68), Expect = 3.6 Identities = 13/35 (37%), Positives = 21/35 (60%) Frame = -1 Query: 615 EILQSYIDRREQVRLIKELYGNQIGELFHSLPYTL 511 E++Q+Y++ ++KE G+ IG FH PY L Sbjct: 150 EVIQNYVENNN-FSVVKEYCGHGIGRAFHEEPYVL 183
>IL1FA_MOUSE (Q8R459) Interleukin-1 family member 10 (IL-1F10)| Length = 152 Score = 30.8 bits (68), Expect = 3.6 Identities = 19/57 (33%), Positives = 26/57 (45%) Frame = +1 Query: 322 QRILGIGEARWYRLSTAVCCGYSLCRAKRPSQDPRLTRQGQD*I*ISDTHCNLAFEI 492 QR LG +RL A C G+ LC P Q +LT++ + TH FE+ Sbjct: 103 QRSLGSA----FRLEAAACPGWFLCGPAEPQQPVQLTKESE-----PSTHTEFYFEM 150 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 94,790,101 Number of Sequences: 219361 Number of extensions: 1978313 Number of successful extensions: 5175 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 5046 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5173 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6143359464 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)