ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd17b03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT024183.1| Zea mays clone EL01N0417B02 mRNA sequence 222 1e-54
2ref|XM_471554.1| Oryza sativa (japonica cultivar-group), predic... 208 2e-50
3dbj|AK100448.1| Oryza sativa (japonica cultivar-group) cDNA clon... 208 2e-50
4gb|AF166121.1|AF166121 Hordeum vulgare Cf2/Cf5 disease resistanc... 103 7e-19
5emb|AL662955.3|OSJN00158 Oryza sativa genomic DNA, chromosome 4,... 100 1e-17
6dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 100 1e-17
7gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 42 2.2
8ref|NM_124921.2| Arabidopsis thaliana EDM2; protein binding / zi... 42 2.2
9gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Ph... 42 2.2
10emb|X60543.1|LPLIPO L.pneumophila gene for lipoprotein antigen 42 2.2
11emb|CR628337.1| Legionella pneumophila str. Lens complete genome 42 2.2
12emb|CR628336.1| Legionella pneumophila str. Paris complete genome 42 2.2
13dbj|AB015479.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 42 2.2
14gb|AY576273.1| Bacteriophage Phi JL001, complete genome 42 2.2
15gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 8.9
16gb|AY229987.1| Cryptophlebia leucotreta granulovirus isolate CV3... 40 8.9
17gb|AC124738.5| Mus musculus BAC clone RP23-344C15 from chromosom... 40 8.9
18emb|CR954246.1| Pseudoalteromonas haloplanktis str. TAC125 chrom... 40 8.9
19emb|BX248343.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 8.9
20emb|CR376756.10| Zebrafish DNA sequence from clone CH211-87A15 i... 40 8.9
21ref|XM_449241.1| Candida glabrata CBS138, CAGL0L10890g partial mRNA 40 8.9
22emb|CR318635.8| Zebrafish DNA sequence from clone CH211-253D2 in... 40 8.9
23emb|CR380958.1| Candida glabrata strain CBS138 chromosome L comp... 40 8.9
24emb|BX842580.1| Mycobacterium tuberculosis H37Rv complete genome... 40 8.9
25gb|AE014179.1| Mus musculus piebald deletion region section 7 of... 40 8.9
26emb|BX649536.8| Zebrafish DNA sequence from clone DKEY-21N8 in l... 40 8.9
27gb|AC010899.8| Homo sapiens BAC clone RP11-543K1 from 2, complet... 40 8.9
28emb|AL929259.13| Mouse DNA sequence from clone RP23-141E12 on ch... 40 8.9 
>gb|BT024183.1| Zea mays clone EL01N0417B02 mRNA sequence
          Length = 1503

 Score =  222 bits (112), Expect = 1e-54
 Identities = 214/248 (86%)
 Strand = Plus / Minus

                                                                        
Query: 383  gatattctctttgcagagcgaagcggccaagccaagaccctcgcctgactaggcagggtc 442
            |||||| |||| || |||||||| ||||||||||||||||| |||||||| |||||||||
Sbjct: 1081 gatattttcttggccgagcgaagtggccaagccaagacccttgcctgactcggcagggtc 1022

                                                                        
Query: 443  aagattagatctgaatatcggatactcactgtaaccttgcattcgaaatcttccagtgta 502
               | |||||| |||||||||||||| | |||||||||||| || ||||| |||| |  |
Sbjct: 1021 tgcagtagatccgaatatcggatactgattgtaaccttgcactcaaaatcctccaataca 962

                                                                        
Query: 503  aactctatcaaggtatatggaagactgtggaacaattctccgatttggttgccatagagc 562
            ||||||||||   |||| |||||||| |||||||  || || |||||||| || ||||||
Sbjct: 961  aactctatcatattataaggaagactatggaacagctcgccaatttggttcccgtagagc 902

                                                                        
Query: 563  tccttgataagacgaacctgttctctcctgtcaatatacgactgcaaaatttcttcaaga 622
            |||||||||||||||||||| ||||||||||||||||| | ||| |||||||||||||||
Sbjct: 901  tccttgataagacgaacctgctctctcctgtcaatataagcctgtaaaatttcttcaaga 842

                    
Query: 623  tgatcaat 630
            ||||||||
Sbjct: 841  tgatcaat 834



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 58/70 (82%)
 Strand = Plus / Minus

                                                                        
Query: 270  ggggtaactccaggacaatctccgcgtatgcttctggcaaactcaaggtcttcagcgcat 329
            |||||| |||||| ||||| || |||||||||||||| | || |||||| || || || |
Sbjct: 1203 ggggtagctccagcacaatgtctgcgtatgcttctggtagacacaaggttttgagtgctt 1144

                      
Query: 330  tctcggcata 339
             |||||||||
Sbjct: 1143 cctcggcata 1134
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>ref|XM_471554.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 951

 Score =  208 bits (105), Expect = 2e-50
 Identities = 204/237 (86%)
 Strand = Plus / Minus

                                                                       
Query: 397 agagcgaagcggccaagccaagaccctcgcctgactaggcagggtcaagattagatctga 456
           ||||||||| |||||||||| |||||| |||||||| |||||||| || | |||||||||
Sbjct: 765 agagcgaagtggccaagccaggaccctggcctgacttggcagggtgaacaatagatctga 706

                                                                       
Query: 457 atatcggatactcactgtaaccttgcattcgaaatcttccagtgtaaactctatcaaggt 516
            ||||||||||| |||||||||||||| || ||||| |||| |  ||| ||||||||  |
Sbjct: 705 gtatcggatactgactgtaaccttgcactcaaaatcctccattacaaattctatcaaatt 646

                                                                       
Query: 517 atatggaagactgtggaacaattctccgatttggttgccatagagctccttgataagacg 576
            || |  ||||||||||||| |||||| |||||||| ||||| || ||||||||||| ||
Sbjct: 645 gtaagagagactgtggaacagttctccaatttggttcccatatagttccttgataagccg 586

                                                                    
Query: 577 aacctgttctctcctgtcaatatacgactgcaaaatttcttcaagatgatcaataaa 633
           |||||| || |||||||||| ||| ||||||||||| ||||||||||||||||||||
Sbjct: 585 aacctgctccctcctgtcaacataagactgcaaaatctcttcaagatgatcaataaa 529



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 91/106 (85%)
 Strand = Plus / Minus

                                                                       
Query: 236 ctttcctgagaatagaacatctgcttcagagcgcggggtaactccaggacaatctccgcg 295
           |||||||||||| |||  ||| |||||||||| |||||||    ||| ||||||||||| 
Sbjct: 944 ctttcctgagaagagagtatccgcttcagagcacggggtaggctcagcacaatctccgca 885

                                                         
Query: 296 tatgcttctggcaaactcaaggtcttcagcgcattctcggcatagg 341
            | ||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 884 aacgcttctggcaaactcaaggtcttcagcgcatcctcggcgtagg 839
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>dbj|AK100448.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023090M19, full
            insert sequence
          Length = 1462

 Score =  208 bits (105), Expect = 2e-50
 Identities = 204/237 (86%)
 Strand = Plus / Minus

                                                                        
Query: 397  agagcgaagcggccaagccaagaccctcgcctgactaggcagggtcaagattagatctga 456
            ||||||||| |||||||||| |||||| |||||||| |||||||| || | |||||||||
Sbjct: 1026 agagcgaagtggccaagccaggaccctggcctgacttggcagggtgaacaatagatctga 967

                                                                        
Query: 457  atatcggatactcactgtaaccttgcattcgaaatcttccagtgtaaactctatcaaggt 516
             ||||||||||| |||||||||||||| || ||||| |||| |  ||| ||||||||  |
Sbjct: 966  gtatcggatactgactgtaaccttgcactcaaaatcctccattacaaattctatcaaatt 907

                                                                        
Query: 517  atatggaagactgtggaacaattctccgatttggttgccatagagctccttgataagacg 576
             || |  ||||||||||||| |||||| |||||||| ||||| || ||||||||||| ||
Sbjct: 906  gtaagagagactgtggaacagttctccaatttggttcccatatagttccttgataagccg 847

                                                                     
Query: 577  aacctgttctctcctgtcaatatacgactgcaaaatttcttcaagatgatcaataaa 633
            |||||| || |||||||||| ||| ||||||||||| ||||||||||||||||||||
Sbjct: 846  aacctgctccctcctgtcaacataagactgcaaaatctcttcaagatgatcaataaa 790



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 91/106 (85%)
 Strand = Plus / Minus

                                                                        
Query: 236  ctttcctgagaatagaacatctgcttcagagcgcggggtaactccaggacaatctccgcg 295
            |||||||||||| |||  ||| |||||||||| |||||||    ||| ||||||||||| 
Sbjct: 1205 ctttcctgagaagagagtatccgcttcagagcacggggtaggctcagcacaatctccgca 1146

                                                          
Query: 296  tatgcttctggcaaactcaaggtcttcagcgcattctcggcatagg 341
             | ||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 1145 aacgcttctggcaaactcaaggtcttcagcgcatcctcggcgtagg 1100
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>gb|AF166121.1|AF166121 Hordeum vulgare Cf2/Cf5 disease resistance protein homolog (Big1)
            gene, complete cds
          Length = 7351

 Score =  103 bits (52), Expect = 7e-19
 Identities = 82/92 (89%)
 Strand = Plus / Plus

                                                                        
Query: 300  cttctggcaaactcaaggtcttcagcgcattctcggcataggagaggcgagatggtacag 359
            |||||||||||||||||||||| | | | |||||  ||||||||||||||||||||||| 
Sbjct: 1829 cttctggcaaactcaaggtcttgaacacgttctccacataggagaggcgagatggtacac 1888

                                            
Query: 360  gttgagcacggcggtctgctgtggatattctc 391
            ||| |||||||||||||||||  |||||||||
Sbjct: 1889 gttaagcacggcggtctgctgcagatattctc 1920



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 59/64 (92%)
 Strand = Plus / Plus

                                                                       
Query: 183 cccacatccgtaaggttaaataaattatctacatgcacgcgtcgctccagtcgctttcct 242
           ||||||||||||||||||||| ||  |||||||||||||||||||| ||||| |||||||
Sbjct: 887 cccacatccgtaaggttaaatcaacaatctacatgcacgcgtcgcttcagtcactttcct 946

               
Query: 243 gaga 246
           ||||
Sbjct: 947 gaga 950
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>emb|AL662955.3|OSJN00158 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019J05,
             complete sequence
          Length = 185211

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 77/86 (89%)
 Strand = Plus / Plus

                                                                         
Query: 397   agagcgaagcggccaagccaagaccctcgcctgactaggcagggtcaagattagatctga 456
             ||||||||| |||||||||| |||||| |||||||| |||||||| || | |||||||||
Sbjct: 98213 agagcgaagtggccaagccaggaccctggcctgacttggcagggtgaacaatagatctga 98272

                                       
Query: 457   atatcggatactcactgtaaccttgc 482
              ||||||||||| |||||||||||||
Sbjct: 98273 gtatcggatactgactgtaaccttgc 98298



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 51/56 (91%)
 Strand = Plus / Plus

                                                                     
Query: 578   acctgttctctcctgtcaatatacgactgcaaaatttcttcaagatgatcaataaa 633
             ||||| || |||||||||| ||| ||||||||||| ||||||||||||||||||||
Sbjct: 99455 acctgctccctcctgtcaacataagactgcaaaatctcttcaagatgatcaataaa 99510



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 52/58 (89%)
 Strand = Plus / Plus

                                                                       
Query: 524   agactgtggaacaattctccgatttggttgccatagagctccttgataagacgaacct 581
             ||||||||||||| |||||| |||||||| ||||| || ||||||||||| |||||||
Sbjct: 98543 agactgtggaacagttctccaatttggttcccatatagttccttgataagccgaacct 98600



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 40/42 (95%)
 Strand = Plus / Plus

                                                       
Query: 300   cttctggcaaactcaaggtcttcagcgcattctcggcatagg 341
             |||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 98098 cttctggcaaactcaaggtcttcagcgcatcctcggcgtagg 98139



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                     
Query: 236   ctttcctgagaatagaacatctgcttcagagcgcggggta 275
             |||||||||||| |||  ||| |||||||||| |||||||
Sbjct: 97936 ctttcctgagaagagagtatccgcttcagagcacggggta 97975
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 77/86 (89%)
 Strand = Plus / Plus

                                                                            
Query: 397      agagcgaagcggccaagccaagaccctcgcctgactaggcagggtcaagattagatctga 456
                ||||||||| |||||||||| |||||| |||||||| |||||||| || | |||||||||
Sbjct: 12273329 agagcgaagtggccaagccaggaccctggcctgacttggcagggtgaacaatagatctga 12273388

                                          
Query: 457      atatcggatactcactgtaaccttgc 482
                 ||||||||||| |||||||||||||
Sbjct: 12273389 gtatcggatactgactgtaaccttgc 12273414



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 51/56 (91%)
 Strand = Plus / Plus

                                                                        
Query: 578      acctgttctctcctgtcaatatacgactgcaaaatttcttcaagatgatcaataaa 633
                ||||| || |||||||||| ||| ||||||||||| ||||||||||||||||||||
Sbjct: 12274571 acctgctccctcctgtcaacataagactgcaaaatctcttcaagatgatcaataaa 12274626



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 52/58 (89%)
 Strand = Plus / Plus

                                                                          
Query: 524      agactgtggaacaattctccgatttggttgccatagagctccttgataagacgaacct 581
                ||||||||||||| |||||| |||||||| ||||| || ||||||||||| |||||||
Sbjct: 12273659 agactgtggaacagttctccaatttggttcccatatagttccttgataagccgaacct 12273716



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 40/42 (95%)
 Strand = Plus / Plus

                                                          
Query: 300      cttctggcaaactcaaggtcttcagcgcattctcggcatagg 341
                |||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 12273214 cttctggcaaactcaaggtcttcagcgcatcctcggcgtagg 12273255



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                        
Query: 236      ctttcctgagaatagaacatctgcttcagagcgcggggta 275
                |||||||||||| |||  ||| |||||||||| |||||||
Sbjct: 12273052 ctttcctgagaagagagtatccgcttcagagcacggggta 12273091
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 350    gatggtacaggttgagcacggcggt 374
              ||||| |||||||||||||||||||
Sbjct: 686673 gatgggacaggttgagcacggcggt 686649
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>ref|NM_124921.2| Arabidopsis thaliana EDM2; protein binding / zinc ion binding
            AT5G55390 (EDM2) mRNA, complete cds
          Length = 4185

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 375  ctgctgtggatattctctttg 395
            |||||||||||||||||||||
Sbjct: 3699 ctgctgtggatattctctttg 3679
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>gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete
               genome
          Length = 3397754

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 46      atgatagtgaaaattttgcaa 66
               |||||||||||||||||||||
Sbjct: 2286382 atgatagtgaaaattttgcaa 2286362
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>emb|X60543.1|LPLIPO L.pneumophila gene for lipoprotein antigen
          Length = 1540

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 46   atgatagtgaaaattttgcaa 66
            |||||||||||||||||||||
Sbjct: 1022 atgatagtgaaaattttgcaa 1042
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>emb|CR628337.1| Legionella pneumophila str. Lens complete genome
          Length = 3345687

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 46      atgatagtgaaaattttgcaa 66
               |||||||||||||||||||||
Sbjct: 2265440 atgatagtgaaaattttgcaa 2265420
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>emb|CR628336.1| Legionella pneumophila str. Paris complete genome
          Length = 3503610

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 46      atgatagtgaaaattttgcaa 66
               |||||||||||||||||||||
Sbjct: 2291921 atgatagtgaaaattttgcaa 2291901
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>dbj|AB015479.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MTE17
          Length = 80675

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 375   ctgctgtggatattctctttg 395
             |||||||||||||||||||||
Sbjct: 24251 ctgctgtggatattctctttg 24271
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>gb|AY576273.1| Bacteriophage Phi JL001, complete genome
          Length = 63649

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 360   gttgagcacggcggtctgctg 380
             |||||||||||||||||||||
Sbjct: 58590 gttgagcacggcggtctgctg 58570
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 353     ggtacaggttgagcacggcg 372
               ||||||||||||||||||||
Sbjct: 2937085 ggtacaggttgagcacggcg 2937104
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>gb|AY229987.1| Cryptophlebia leucotreta granulovirus isolate CV3, complete genome
          Length = 110907

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 485    tcgaaatcttccagtgtaaa 504
              ||||||||||||||||||||
Sbjct: 106118 tcgaaatcttccagtgtaaa 106137
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>gb|AC124738.5| Mus musculus BAC clone RP23-344C15 from chromosome 14, complete
             sequence
          Length = 204590

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 153   ctctgctgtcaaatattggg 172
             ||||||||||||||||||||
Sbjct: 54351 ctctgctgtcaaatattggg 54370
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>emb|CR954246.1| Pseudoalteromonas haloplanktis str. TAC125 chromosome I, complete sequence
          Length = 3214944

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 608     aaaatttcttcaagatgatc 627
               ||||||||||||||||||||
Sbjct: 2812118 aaaatttcttcaagatgatc 2812099
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>emb|BX248343.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment
             10/14
          Length = 307550

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 353   ggtacaggttgagcacggcg 372
             ||||||||||||||||||||
Sbjct: 90898 ggtacaggttgagcacggcg 90917
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>emb|CR376756.10| Zebrafish DNA sequence from clone CH211-87A15 in linkage group 23,
              complete sequence
          Length = 203373

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 546    tttggttgccatagagctcc 565
              ||||||||||||||||||||
Sbjct: 161070 tttggttgccatagagctcc 161089
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>ref|XM_449241.1| Candida glabrata CBS138, CAGL0L10890g partial mRNA
          Length = 1374

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 611 atttcttcaagatgatcaat 630
           ||||||||||||||||||||
Sbjct: 740 atttcttcaagatgatcaat 721
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>emb|CR318635.8| Zebrafish DNA sequence from clone CH211-253D2 in linkage group 23,
              complete sequence
          Length = 154312

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 546    tttggttgccatagagctcc 565
              ||||||||||||||||||||
Sbjct: 125472 tttggttgccatagagctcc 125453
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>emb|CR380958.1| Candida glabrata strain CBS138 chromosome L complete sequence
          Length = 1440588

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 611     atttcttcaagatgatcaat 630
               ||||||||||||||||||||
Sbjct: 1163823 atttcttcaagatgatcaat 1163804
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>emb|BX842580.1| Mycobacterium tuberculosis H37Rv complete genome; segment 9/13
          Length = 346051

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 353    ggtacaggttgagcacggcg 372
              ||||||||||||||||||||
Sbjct: 167905 ggtacaggttgagcacggcg 167924
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>gb|AE014179.1| Mus musculus piebald deletion region section 7 of 11 of the complete
             sequence
          Length = 400029

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 153   ctctgctgtcaaatattggg 172
             ||||||||||||||||||||
Sbjct: 73451 ctctgctgtcaaatattggg 73432
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>emb|BX649536.8| Zebrafish DNA sequence from clone DKEY-21N8 in linkage group 3,
             complete sequence
          Length = 203180

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 137   tcaaactactaaattactct 156
             ||||||||||||||||||||
Sbjct: 87875 tcaaactactaaattactct 87894
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>gb|AC010899.8| Homo sapiens BAC clone RP11-543K1 from 2, complete sequence
          Length = 210232

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 132    aagaatcaaactactaaatt 151
              ||||||||||||||||||||
Sbjct: 140939 aagaatcaaactactaaatt 140920
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>emb|AL929259.13| Mouse DNA sequence from clone RP23-141E12 on chromosome 2, complete
              sequence
          Length = 153645

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 200    aaataaattatctacatgca 219
              ||||||||||||||||||||
Sbjct: 140110 aaataaattatctacatgca 140129


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,063,047
Number of Sequences: 3902068
Number of extensions: 5063047
Number of successful extensions: 91945
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 91739
Number of HSP's gapped (non-prelim): 202
length of query: 651
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 628
effective length of database: 17,143,297,704
effective search space: 10765990958112
effective search space used: 10765990958112
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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