Clone Name | rbasd16m01 |
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Clone Library Name | barley_pub |
>ref|XM_507360.1| PREDICTED Oryza sativa (japonica cultivar-group), P0492E07.108 mRNA Length = 1297 Score = 234 bits (118), Expect = 3e-58 Identities = 345/421 (81%) Strand = Plus / Minus Query: 210 atgaccctcctcgcgaatgatggcaaacaaaacgatgcagtgtggaactcggagttgtag 269 ||||| ||| |||| || || ||||||||||| ||||| | ||||| |||||| |||||| Sbjct: 1089 atgactctcttcgcaaaagacggcaaacaaaatgatgctgagtggatctcggaattgtag 1030 Query: 270 aacttgagcggccccttggattttgttgagtattcgtcatcctcgatgctgaagacagga 329 ||||| || || || || |||||||||||| | || | |||||| ||| | || | |||| Sbjct: 1029 aacttaagtggtcctttcgattttgttgagaactcattatcctcaatgttaaaaatagga 970 Query: 330 tgctggaaatcaacactaggcccctccgtggagcagagcatgaaacctatcactccgctt 389 ||||||||||||||| |||||||||| |||||||| ||||| ||||| || || || || Sbjct: 969 tgctggaaatcaacagtaggcccctcggtggagcaaagcataaaaccaataacaccacta 910 Query: 390 gggtatgtgggcaccgtagtccatgcgtagttcaccgagcccttgaaaacctggcgacag 449 |||||||| || || || ||||| || || ||||| ||||| || ||||| |||||||| Sbjct: 909 gggtatgttggtactgttgtccaagcataattcactgagcctttaaaaacttggcgacaa 850 Query: 450 ttggtgacaatgtcttctatgatgtgcatgtgcagccatatgctctccgcctgggtgcag 509 || | ||||| ||||| || || ||||| |||| |||||||||||| |||||||| || Sbjct: 849 ttagctacaatatcttcaataatatgcatatgcaaccatatgctctctgcctgggtacat 790 Query: 510 acgaccccgcccggacgcanagccctggagacggactggaagaaaggcttctcgaaaagc 569 || || || || ||||||| ||| |||| || ||||||||||||||||||||||||||| Sbjct: 789 acaacaccaccaggacgcaaagctctggcaactgactggaagaaaggcttctcgaaaagc 730 Query: 570 tcctgagcagggcctactggatcggaggaatcgacgatcactgcatcataggtgccctct 629 || ||||| || |||| |||||| |||||||| || || ||||||||||| || |||||| Sbjct: 729 tcttgagccggtcctattggatcagaggaatccacaataactgcatcataagtaccctct 670 Query: 630 g 630 | Sbjct: 669 g 669
>ref|XM_506281.2| PREDICTED Oryza sativa (japonica cultivar-group), P0492E07.108 mRNA Length = 1346 Score = 234 bits (118), Expect = 3e-58 Identities = 345/421 (81%) Strand = Plus / Minus Query: 210 atgaccctcctcgcgaatgatggcaaacaaaacgatgcagtgtggaactcggagttgtag 269 ||||| ||| |||| || || ||||||||||| ||||| | ||||| |||||| |||||| Sbjct: 1090 atgactctcttcgcaaaagacggcaaacaaaatgatgctgagtggatctcggaattgtag 1031 Query: 270 aacttgagcggccccttggattttgttgagtattcgtcatcctcgatgctgaagacagga 329 ||||| || || || || |||||||||||| | || | |||||| ||| | || | |||| Sbjct: 1030 aacttaagtggtcctttcgattttgttgagaactcattatcctcaatgttaaaaatagga 971 Query: 330 tgctggaaatcaacactaggcccctccgtggagcagagcatgaaacctatcactccgctt 389 ||||||||||||||| |||||||||| |||||||| ||||| ||||| || || || || Sbjct: 970 tgctggaaatcaacagtaggcccctcggtggagcaaagcataaaaccaataacaccacta 911 Query: 390 gggtatgtgggcaccgtagtccatgcgtagttcaccgagcccttgaaaacctggcgacag 449 |||||||| || || || ||||| || || ||||| ||||| || ||||| |||||||| Sbjct: 910 gggtatgttggtactgttgtccaagcataattcactgagcctttaaaaacttggcgacaa 851 Query: 450 ttggtgacaatgtcttctatgatgtgcatgtgcagccatatgctctccgcctgggtgcag 509 || | ||||| ||||| || || ||||| |||| |||||||||||| |||||||| || Sbjct: 850 ttagctacaatatcttcaataatatgcatatgcaaccatatgctctctgcctgggtacat 791 Query: 510 acgaccccgcccggacgcanagccctggagacggactggaagaaaggcttctcgaaaagc 569 || || || || ||||||| ||| |||| || ||||||||||||||||||||||||||| Sbjct: 790 acaacaccaccaggacgcaaagctctggcaactgactggaagaaaggcttctcgaaaagc 731 Query: 570 tcctgagcagggcctactggatcggaggaatcgacgatcactgcatcataggtgccctct 629 || ||||| || |||| |||||| |||||||| || || ||||||||||| || |||||| Sbjct: 730 tcttgagccggtcctattggatcagaggaatccacaataactgcatcataagtaccctct 671 Query: 630 g 630 | Sbjct: 670 g 670
>emb|AJ251298.1|OSA251298 Oryza sativa mRNA for spermidine synthase 1 (spdSyn1 gene) Length = 1308 Score = 234 bits (118), Expect = 3e-58 Identities = 345/421 (81%) Strand = Plus / Minus Query: 210 atgaccctcctcgcgaatgatggcaaacaaaacgatgcagtgtggaactcggagttgtag 269 ||||| ||| |||| || || ||||||||||| ||||| | ||||| |||||| |||||| Sbjct: 1052 atgactctcttcgcaaaagacggcaaacaaaatgatgctgagtggatctcggaattgtag 993 Query: 270 aacttgagcggccccttggattttgttgagtattcgtcatcctcgatgctgaagacagga 329 ||||| || || || || |||||||||||| | || | |||||| ||| | || | |||| Sbjct: 992 aacttaagtggtcctttcgattttgttgagaactcattatcctcaatgttaaaaatagga 933 Query: 330 tgctggaaatcaacactaggcccctccgtggagcagagcatgaaacctatcactccgctt 389 ||||||||||||||| |||||||||| |||||||| ||||| ||||| || || || || Sbjct: 932 tgctggaaatcaacagtaggcccctcggtggagcaaagcataaaaccaataacaccacta 873 Query: 390 gggtatgtgggcaccgtagtccatgcgtagttcaccgagcccttgaaaacctggcgacag 449 |||||||| || || || ||||| || || ||||| ||||| || ||||| |||||||| Sbjct: 872 gggtatgttggtactgttgtccaagcataattcactgagcctttaaaaacttggcgacaa 813 Query: 450 ttggtgacaatgtcttctatgatgtgcatgtgcagccatatgctctccgcctgggtgcag 509 || | ||||| ||||| || || ||||| |||| |||||||||||| |||||||| || Sbjct: 812 ttagctacaatatcttcaataatatgcatatgcaaccatatgctctctgcctgggtacat 753 Query: 510 acgaccccgcccggacgcanagccctggagacggactggaagaaaggcttctcgaaaagc 569 || || || || ||||||| ||| |||| || ||||||||||||||||||||||||||| Sbjct: 752 acaacaccaccaggacgcaaagctctggcaactgactggaagaaaggcttctcgaaaagc 693 Query: 570 tcctgagcagggcctactggatcggaggaatcgacgatcactgcatcataggtgccctct 629 || ||||| || |||| |||||| |||||||| || || ||||||||||| || |||||| Sbjct: 692 tcttgagccggtcctattggatcagaggaatccacaataactgcatcataagtaccctct 633 Query: 630 g 630 | Sbjct: 632 g 632
>dbj|AK099606.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013048E04, full insert sequence Length = 1346 Score = 234 bits (118), Expect = 3e-58 Identities = 345/421 (81%) Strand = Plus / Minus Query: 210 atgaccctcctcgcgaatgatggcaaacaaaacgatgcagtgtggaactcggagttgtag 269 ||||| ||| |||| || || ||||||||||| ||||| | ||||| |||||| |||||| Sbjct: 1090 atgactctcttcgcaaaagacggcaaacaaaatgatgctgagtggatctcggaattgtag 1031 Query: 270 aacttgagcggccccttggattttgttgagtattcgtcatcctcgatgctgaagacagga 329 ||||| || || || || |||||||||||| | || | |||||| ||| | || | |||| Sbjct: 1030 aacttaagtggtcctttcgattttgttgagaactcattatcctcaatgttaaaaatagga 971 Query: 330 tgctggaaatcaacactaggcccctccgtggagcagagcatgaaacctatcactccgctt 389 ||||||||||||||| |||||||||| |||||||| ||||| ||||| || || || || Sbjct: 970 tgctggaaatcaacagtaggcccctcggtggagcaaagcataaaaccaataacaccacta 911 Query: 390 gggtatgtgggcaccgtagtccatgcgtagttcaccgagcccttgaaaacctggcgacag 449 |||||||| || || || ||||| || || ||||| ||||| || ||||| |||||||| Sbjct: 910 gggtatgttggtactgttgtccaagcataattcactgagcctttaaaaacttggcgacaa 851 Query: 450 ttggtgacaatgtcttctatgatgtgcatgtgcagccatatgctctccgcctgggtgcag 509 || | ||||| ||||| || || ||||| |||| |||||||||||| |||||||| || Sbjct: 850 ttagctacaatatcttcaataatatgcatatgcaaccatatgctctctgcctgggtacat 791 Query: 510 acgaccccgcccggacgcanagccctggagacggactggaagaaaggcttctcgaaaagc 569 || || || || ||||||| ||| |||| || ||||||||||||||||||||||||||| Sbjct: 790 acaacaccaccaggacgcaaagctctggcaactgactggaagaaaggcttctcgaaaagc 731 Query: 570 tcctgagcagggcctactggatcggaggaatcgacgatcactgcatcataggtgccctct 629 || ||||| || |||| |||||| |||||||| || || ||||||||||| || |||||| Sbjct: 730 tcttgagccggtcctattggatcagaggaatccacaataactgcatcataagtaccctct 671 Query: 630 g 630 | Sbjct: 670 g 670
>dbj|AK060916.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-G07, full insert sequence Length = 1297 Score = 234 bits (118), Expect = 3e-58 Identities = 345/421 (81%) Strand = Plus / Minus Query: 210 atgaccctcctcgcgaatgatggcaaacaaaacgatgcagtgtggaactcggagttgtag 269 ||||| ||| |||| || || ||||||||||| ||||| | ||||| |||||| |||||| Sbjct: 1089 atgactctcttcgcaaaagacggcaaacaaaatgatgctgagtggatctcggaattgtag 1030 Query: 270 aacttgagcggccccttggattttgttgagtattcgtcatcctcgatgctgaagacagga 329 ||||| || || || || |||||||||||| | || | |||||| ||| | || | |||| Sbjct: 1029 aacttaagtggtcctttcgattttgttgagaactcattatcctcaatgttaaaaatagga 970 Query: 330 tgctggaaatcaacactaggcccctccgtggagcagagcatgaaacctatcactccgctt 389 ||||||||||||||| |||||||||| |||||||| ||||| ||||| || || || || Sbjct: 969 tgctggaaatcaacagtaggcccctcggtggagcaaagcataaaaccaataacaccacta 910 Query: 390 gggtatgtgggcaccgtagtccatgcgtagttcaccgagcccttgaaaacctggcgacag 449 |||||||| || || || ||||| || || ||||| ||||| || ||||| |||||||| Sbjct: 909 gggtatgttggtactgttgtccaagcataattcactgagcctttaaaaacttggcgacaa 850 Query: 450 ttggtgacaatgtcttctatgatgtgcatgtgcagccatatgctctccgcctgggtgcag 509 || | ||||| ||||| || || ||||| |||| |||||||||||| |||||||| || Sbjct: 849 ttagctacaatatcttcaataatatgcatatgcaaccatatgctctctgcctgggtacat 790 Query: 510 acgaccccgcccggacgcanagccctggagacggactggaagaaaggcttctcgaaaagc 569 || || || || ||||||| ||| |||| || ||||||||||||||||||||||||||| Sbjct: 789 acaacaccaccaggacgcaaagctctggcaactgactggaagaaaggcttctcgaaaagc 730 Query: 570 tcctgagcagggcctactggatcggaggaatcgacgatcactgcatcataggtgccctct 629 || ||||| || |||| |||||| |||||||| || || ||||||||||| || |||||| Sbjct: 729 tcttgagccggtcctattggatcagaggaatccacaataactgcatcataagtaccctct 670 Query: 630 g 630 | Sbjct: 669 g 669
>gb|BT024141.1| Zea mays clone EL01N0442H12 mRNA sequence Length = 1281 Score = 208 bits (105), Expect = 2e-50 Identities = 311/380 (81%) Strand = Plus / Minus Query: 206 ctcgatgaccctcctcgcgaatgatggcaaacaaaacgatgcagtgtggaactcggagtt 265 |||||| |||||| | || || || |||||||| || ||||| ||||||| ||| ||||| Sbjct: 985 ctcgattaccctctttgcaaaagaaggcaaacagaatgatgccgtgtggatctccgagtt 926 Query: 266 gtagaacttgagcggccccttggattttgttgagtattcgtcatcctcgatgctgaagac 325 ||||||||| || || || || ||||| | | | ||| || ||||||||| |||| || Sbjct: 925 gtagaacttaaggggtccttttgatttcataggatgttcatcctcctcgatgttgaaaac 866 Query: 326 aggatgctggaaatcaacactaggcccctccgtggagcagagcatgaaacctatcactcc 385 ||| ||||||||||||||| |||||| || |||||||| |||||||| || || ||||| Sbjct: 865 agggtgctggaaatcaacagcaggcccttcggtggagcaaagcatgaacccaataactcc 806 Query: 386 gcttgggtatgtgggcaccgtagtccatgcgtagttcaccgagcccttgaaaacctggcg 445 ||| |||||||| |||||||| ||||| || ||||| |||||||| |||||||| || || Sbjct: 805 gctagggtatgtaggcaccgttgtccaagcatagttaaccgagcctttgaaaacttgtcg 746 Query: 446 acagttggtgacaatgtcttctatgatgtgcatgtgcagccatatgctctccgcctgggt 505 ||| ||| ||||| ||||| || |||||||| || |||||||||||||| || ||||| Sbjct: 745 acaattgacaacaatatcttcaataatgtgcatatgtagccatatgctctctgcttgggt 686 Query: 506 gcagacgaccccgcccggacgcanagccctggagacggactggaagaaaggcttctcgaa 565 ||| || || || || ||||||| ||| |||| || ||||||||||||||||||| || Sbjct: 685 gcatacaactccacctggacgcaaagctctggccaccaactggaagaaaggcttctcaaa 626 Query: 566 aagctcctgagcagggccta 585 |||||| |||||||| |||| Sbjct: 625 aagctcttgagcaggaccta 606
>gb|AY103592.1| Zea mays PCO075678 mRNA sequence Length = 1471 Score = 208 bits (105), Expect = 2e-50 Identities = 311/380 (81%) Strand = Plus / Minus Query: 206 ctcgatgaccctcctcgcgaatgatggcaaacaaaacgatgcagtgtggaactcggagtt 265 |||||| |||||| | || || || |||||||| || ||||| ||||||| ||| ||||| Sbjct: 1044 ctcgattaccctctttgcaaaagaaggcaaacagaatgatgccgtgtggatctccgagtt 985 Query: 266 gtagaacttgagcggccccttggattttgttgagtattcgtcatcctcgatgctgaagac 325 ||||||||| || || ||||| ||||| | | | || || ||||||||| |||| || Sbjct: 984 gtagaacttaaggggtccctttgatttcataggatgctcatcctcctcgatgttgaaaac 925 Query: 326 aggatgctggaaatcaacactaggcccctccgtggagcagagcatgaaacctatcactcc 385 ||| ||||||||||||||| |||||| || |||||||| |||||||| || || ||||| Sbjct: 924 agggtgctggaaatcaacagcaggcccttcggtggagcaaagcatgaacccaataactcc 865 Query: 386 gcttgggtatgtgggcaccgtagtccatgcgtagttcaccgagcccttgaaaacctggcg 445 ||| |||||||| |||||||| ||||| || ||||| |||||||| |||||||| || || Sbjct: 864 gctagggtatgtaggcaccgttgtccaagcatagttaaccgagcctttgaaaacttgtcg 805 Query: 446 acagttggtgacaatgtcttctatgatgtgcatgtgcagccatatgctctccgcctgggt 505 ||| ||| ||||| ||||| || |||||||| || |||||||||||||| || ||||| Sbjct: 804 acaattgacaacaatatcttcaataatgtgcatatgtagccatatgctctctgcttgggt 745 Query: 506 gcagacgaccccgcccggacgcanagccctggagacggactggaagaaaggcttctcgaa 565 ||| || || || || ||||||| ||| |||| || ||||||||||||||||||| || Sbjct: 744 gcatacaactccacctggacgcaaagctctggccaccaactggaagaaaggcttctcaaa 685 Query: 566 aagctcctgagcagggccta 585 |||||| |||||||| |||| Sbjct: 684 aagctcttgagcaggaccta 665
>ref|NM_187782.1| Oryza sativa (japonica cultivar-group), mRNA Length = 963 Score = 206 bits (104), Expect = 6e-50 Identities = 342/421 (81%), Gaps = 3/421 (0%) Strand = Plus / Minus Query: 210 atgaccctcctcgcgaatgatggcaaacaaaacgatgcagtgtggaactcggagttgtag 269 ||||| ||| |||| || || ||||||||||| ||||| | ||||| |||||| |||||| Sbjct: 944 atgactctcttcgcaaaagacggcaaacaaaatgatgctgagtggatctcggaattgtag 885 Query: 270 aacttgagcggccccttggattttgttgagtattcgtcatcctcgatgctgaagacagga 329 ||||| || || || || |||||||||||| | || | |||||| ||| | || | |||| Sbjct: 884 aacttaagtggtcctttcgattttgttgagaactcattatcctcaatgttaaaaatagga 825 Query: 330 tgctggaaatcaacactaggcccctccgtggagcagagcatgaaacctatcactccgctt 389 ||||||||||||||| |||||||||| |||||||| ||||| ||||| || || || Sbjct: 824 tgctggaaatcaacagtaggcccctcggtggagcaaagcataaaaccaataacacca--- 768 Query: 390 gggtatgtgggcaccgtagtccatgcgtagttcaccgagcccttgaaaacctggcgacag 449 |||||||| || || || ||||| || || ||||| ||||| || ||||| |||||||| Sbjct: 767 gggtatgttggtactgttgtccaagcataattcactgagcctttaaaaacttggcgacaa 708 Query: 450 ttggtgacaatgtcttctatgatgtgcatgtgcagccatatgctctccgcctgggtgcag 509 || | ||||| ||||| || || ||||| |||| |||||||||||| |||||||| || Sbjct: 707 ttagctacaatatcttcaataatatgcatatgcaaccatatgctctctgcctgggtacat 648 Query: 510 acgaccccgcccggacgcanagccctggagacggactggaagaaaggcttctcgaaaagc 569 || || || || ||||||| ||| |||| || ||||||||||||||||||||||||||| Sbjct: 647 acaacaccaccaggacgcaaagctctggcaactgactggaagaaaggcttctcgaaaagc 588 Query: 570 tcctgagcagggcctactggatcggaggaatcgacgatcactgcatcataggtgccctct 629 || ||||| || ||| |||||| |||||||| || || ||||||||||| || |||||| Sbjct: 587 tcttgagccggtcctggtggatcagaggaatccacaataactgcatcataagtaccctct 528 Query: 630 g 630 | Sbjct: 527 g 527
>gb|AY646352.1| Cucumis sativus spermidine synthase mRNA, complete cds Length = 1398 Score = 127 bits (64), Expect = 5e-26 Identities = 148/176 (84%) Strand = Plus / Minus Query: 327 ggatgctggaaatcaacactaggcccctccgtggagcagagcatgaaacctatcactccg 386 ||||||| |||||| ||| |||| ||||| || ||||||||||| || || ||||||||| Sbjct: 901 ggatgcttgaaatcgacagtaggtccctcagttgagcagagcataaacccaatcactccg 842 Query: 387 cttgggtatgtgggcaccgtagtccatgcgtagttcaccgagcccttgaaaacctggcga 446 || || |||||||| || ||||||||||| ||||| || ||||| ||||| | |||||| Sbjct: 841 ctgggatatgtgggaactgtagtccatgcatagttgacagagcctttgaatatctggcgg 782 Query: 447 cagttggtgacaatgtcttctatgatgtgcatgtgcagccatatgctctccgcctg 502 ||||| || ||||||||||| || ||||||||||| ||||| |||| ||| ||||| Sbjct: 781 cagtttgttacaatgtcttcgattatgtgcatgtggagccagatgccctctgcctg 726
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 105 bits (53), Expect = 2e-19 Identities = 154/188 (81%) Strand = Plus / Plus Query: 390 gggtatgtgggcaccgtagtccatgcgtagttcaccgagcccttgaaaacctggcgacag 449 |||||||| || || || ||||| || || ||||| ||||| || ||||| |||||||| Sbjct: 12663646 gggtatgttggtactgttgtccaagcataattcactgagcctttaaaaacttggcgacaa 12663705 Query: 450 ttggtgacaatgtcttctatgatgtgcatgtgcagccatatgctctccgcctgggtgcag 509 || | ||||| ||||| || || ||||| |||| |||||||||||| |||||||| || Sbjct: 12663706 ttagctacaatatcttcaataatatgcatatgcaaccatatgctctctgcctgggtacat 12663765 Query: 510 acgaccccgcccggacgcanagccctggagacggactggaagaaaggcttctcgaaaagc 569 || || || || ||||||| ||| |||| || ||||||||||||||||||||||||||| Sbjct: 12663766 acaacaccaccaggacgcaaagctctggcaactgactggaagaaaggcttctcgaaaagc 12663825 Query: 570 tcctgagc 577 || ||||| Sbjct: 12663826 tcttgagc 12663833 Score = 87.7 bits (44), Expect = 4e-14 Identities = 101/120 (84%) Strand = Plus / Plus Query: 257 ctcggagttgtagaacttgagcggccccttggattttgttgagtattcgtcatcctcgat 316 |||||| ||||||||||| || || || || |||||||||||| | || | |||||| || Sbjct: 12663437 ctcggaattgtagaacttaagtggtcctttcgattttgttgagaactcattatcctcaat 12663496 Query: 317 gctgaagacaggatgctggaaatcaacactaggcccctccgtggagcagagcatgaaacc 376 | | || | ||||||||||||||||||| |||||||||| |||||||| ||||| ||||| Sbjct: 12663497 gttaaaaataggatgctggaaatcaacagtaggcccctcggtggagcaaagcataaaacc 12663556 Score = 42.1 bits (21), Expect = 2.2 Identities = 42/49 (85%) Strand = Plus / Plus Query: 582 cctactggatcggaggaatcgacgatcactgcatcataggtgccctctg 630 |||| |||||| |||||||| || || ||||||||||| || ||||||| Sbjct: 12663918 cctattggatcagaggaatccacaataactgcatcataagtaccctctg 12663966
>dbj|AP004305.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0492E07 Length = 143794 Score = 105 bits (53), Expect = 2e-19 Identities = 154/188 (81%) Strand = Plus / Plus Query: 390 gggtatgtgggcaccgtagtccatgcgtagttcaccgagcccttgaaaacctggcgacag 449 |||||||| || || || ||||| || || ||||| ||||| || ||||| |||||||| Sbjct: 38116 gggtatgttggtactgttgtccaagcataattcactgagcctttaaaaacttggcgacaa 38175 Query: 450 ttggtgacaatgtcttctatgatgtgcatgtgcagccatatgctctccgcctgggtgcag 509 || | ||||| ||||| || || ||||| |||| |||||||||||| |||||||| || Sbjct: 38176 ttagctacaatatcttcaataatatgcatatgcaaccatatgctctctgcctgggtacat 38235 Query: 510 acgaccccgcccggacgcanagccctggagacggactggaagaaaggcttctcgaaaagc 569 || || || || ||||||| ||| |||| || ||||||||||||||||||||||||||| Sbjct: 38236 acaacaccaccaggacgcaaagctctggcaactgactggaagaaaggcttctcgaaaagc 38295 Query: 570 tcctgagc 577 || ||||| Sbjct: 38296 tcttgagc 38303 Score = 87.7 bits (44), Expect = 4e-14 Identities = 101/120 (84%) Strand = Plus / Plus Query: 257 ctcggagttgtagaacttgagcggccccttggattttgttgagtattcgtcatcctcgat 316 |||||| ||||||||||| || || || || |||||||||||| | || | |||||| || Sbjct: 37907 ctcggaattgtagaacttaagtggtcctttcgattttgttgagaactcattatcctcaat 37966 Query: 317 gctgaagacaggatgctggaaatcaacactaggcccctccgtggagcagagcatgaaacc 376 | | || | ||||||||||||||||||| |||||||||| |||||||| ||||| ||||| Sbjct: 37967 gttaaaaataggatgctggaaatcaacagtaggcccctcggtggagcaaagcataaaacc 38026 Score = 42.1 bits (21), Expect = 2.2 Identities = 42/49 (85%) Strand = Plus / Plus Query: 582 cctactggatcggaggaatcgacgatcactgcatcataggtgccctctg 630 |||| |||||| |||||||| || || ||||||||||| || ||||||| Sbjct: 38388 cctattggatcagaggaatccacaataactgcatcataagtaccctctg 38436
>gb|AY705437.1| Silene latifolia spermidine synthase X gene, partial cds Length = 3711 Score = 97.6 bits (49), Expect = 4e-17 Identities = 159/196 (81%) Strand = Plus / Minus Query: 390 gggtatgtgggcaccgtagtccatgcgtagttcaccgagcccttgaaaacctggcgacag 449 |||||||| || || ||||||||||| ||||| |||||||||||||||| || ||| ||| Sbjct: 2889 gggtatgttggaactgtagtccatgcatagttaaccgagcccttgaaaatctcgcggcag 2830 Query: 450 ttggtgacaatgtcttctatgatgtgcatgtgcagccatatgctctccgcctgggtgcag 509 || | ||||| ||||| || || |||||||| |||||||| || || || |||||||| Sbjct: 2829 ttagaaacaatatcttcgattatatgcatgtgaagccatatactttcagcttgggtgcaa 2770 Query: 510 acgaccccgcccggacgcanagccctggagacggactggaagaaaggcttctcgaaaagc 569 || || || || || || | |||| | | ||||||| |||||||||||| || |||||| Sbjct: 2769 acaactcctcctggtcgaagagcctttgcaacggactcgaagaaaggcttttcaaaaagc 2710 Query: 570 tcctgagcagggccta 585 |||| |||||||||| Sbjct: 2709 tcctttgcagggccta 2694 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 gcgaatgatggcaaacaaaa 241 |||||||||||||||||||| Sbjct: 3674 gcgaatgatggcaaacaaaa 3655
>gb|AY705436.1| Silene vulgaris spermidine synthase gene, partial cds Length = 3533 Score = 97.6 bits (49), Expect = 4e-17 Identities = 159/196 (81%) Strand = Plus / Minus Query: 390 gggtatgtgggcaccgtagtccatgcgtagttcaccgagcccttgaaaacctggcgacag 449 |||||||| || || ||||||||||| ||||| |||||||||||||||| || ||| ||| Sbjct: 2836 gggtatgttggaactgtagtccatgcatagttaaccgagcccttgaaaatctcgcggcag 2777 Query: 450 ttggtgacaatgtcttctatgatgtgcatgtgcagccatatgctctccgcctgggtgcag 509 || | ||||| ||||| || || |||||||| |||||||| || || || |||||||| Sbjct: 2776 ttagaaacaatatcttcgattatatgcatgtgaagccatatactttcagcttgggtgcaa 2717 Query: 510 acgaccccgcccggacgcanagccctggagacggactggaagaaaggcttctcgaaaagc 569 || || || || || || | |||| | | ||||||| |||||||||||| || |||||| Sbjct: 2716 acaactcctcctggtcgaagagcctttgcaacggactcgaagaaaggcttttcaaaaagc 2657 Query: 570 tcctgagcagggccta 585 |||| |||||||||| Sbjct: 2656 tcctttgcagggccta 2641 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 gcgaatgatggcaaacaaaa 241 |||||||||||||||||||| Sbjct: 3496 gcgaatgatggcaaacaaaa 3477
>emb|AJ006414.1|LES6414 Lycopersicon esculentum mRNA for spermidine synthase Length = 1269 Score = 95.6 bits (48), Expect = 2e-16 Identities = 126/152 (82%) Strand = Plus / Minus Query: 351 ccctccgtggagcagagcatgaaacctatcactccgcttgggtatgtgggcaccgtagtc 410 ||||| || ||||||||||||||||| |||| || ||||| || || || || |||||| Sbjct: 971 ccctcagtagagcagagcatgaaaccaatcatgccacttggataagtaggaacagtagtc 912 Query: 411 catgcgtagttcaccgagcccttgaaaacctggcgacagttggtgacaatgtcttctatg 470 ||||| ||||| || ||||| ||||| | |||||| || || | ||||| ||||| ||| Sbjct: 911 catgcatagttgacagagcctttgaagatctggcggcaattagcaacaatttcttcaatg 852 Query: 471 atgtgcatgtgcagccatatgctctccgcctg 502 ||||||||||| |||||||||||||| ||||| Sbjct: 851 atgtgcatgtgaagccatatgctctcagcctg 820 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 207 tcgatgaccctcctcgcgaatgatggcaaacaaaacgatgc 247 ||||| |||||| | ||||||||||||||||| || ||||| Sbjct: 1112 tcgatcaccctcttggcgaatgatggcaaacagaatgatgc 1072
>dbj|AB006692.1| Nicotiana sylvestris mRNA for spermidine synthase, complete cds Length = 1168 Score = 95.6 bits (48), Expect = 2e-16 Identities = 126/152 (82%) Strand = Plus / Minus Query: 351 ccctccgtggagcagagcatgaaacctatcactccgcttgggtatgtgggcaccgtagtc 410 ||||| || ||||||||||||||||| |||| |||||||| || || || || |||||| Sbjct: 809 ccctcggtagagcagagcatgaaaccaatcataccgcttggataagtaggaactgtagtc 750 Query: 411 catgcgtagttcaccgagcccttgaaaacctggcgacagttggtgacaatgtcttctatg 470 ||||| ||||| || ||||| ||||| | ||||| || |||| ||||| ||||| || Sbjct: 749 catgcatagttgactgagcctttgaagatttggcggcaattggcaacaatttcttcaata 690 Query: 471 atgtgcatgtgcagccatatgctctccgcctg 502 ||||||||||| |||||||||||||| ||||| Sbjct: 689 atgtgcatgtgaagccatatgctctcagcctg 658 Score = 44.1 bits (22), Expect = 0.55 Identities = 43/50 (86%) Strand = Plus / Minus Query: 225 aatgatggcaaacaaaacgatgcagtgtggaactcggagttgtagaactt 274 |||||||||||||| || ||||| |||| | ||| |||||||||||||| Sbjct: 935 aatgatggcaaacagaatgatgctttgtgaagctcagagttgtagaactt 886
>emb|Y08252.1|DSSS1 D.stramonium mRNA for spermidine synthase 1 Length = 1190 Score = 91.7 bits (46), Expect = 3e-15 Identities = 150/185 (81%) Strand = Plus / Minus Query: 351 ccctccgtggagcagagcatgaaacctatcactccgcttgggtatgtgggcaccgtagtc 410 ||||| || ||||||||||||||||| || || || ||||| || || || || || ||| Sbjct: 803 ccctcagtagagcagagcatgaaaccaataacaccacttggataagtaggaactgtggtc 744 Query: 411 catgcgtagttcaccgagcccttgaaaacctggcgacagttggtgacaatgtcttctatg 470 || || ||||| || ||||| ||||| | |||||| ||||| | || || ||||| || Sbjct: 743 caggcatagttgactgagcctttgaagatctggcggcagtttgccacgatatcttcaatt 684 Query: 471 atgtgcatgtgcagccatatgctctccgcctgggtgcagacgaccccgcccggacgcana 530 || |||||||| |||||||||||||||||||| || ||||| ||||| || ||||||| | Sbjct: 683 atatgcatgtgaagccatatgctctccgcctgcgtacagacaacccctccgggacgcaga 624 Query: 531 gccct 535 ||||| Sbjct: 623 gccct 619 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 213 accctcctcgcgaatgatggcaaacaaaacgatgcagtgtggaactcggagttgtagaac 272 |||||| |||| || ||||||||||| |||||||||| ||| | ||| |||||||||||| Sbjct: 941 accctcttcgcaaaagatggcaaacagaacgatgcagagtgaatctcagagttgtagaac 882 Query: 273 tt 274 || Sbjct: 881 tt 880
>dbj|AB006691.1| Hyoscyamus niger mRNA for spermidine synthase 2, complete cds Length = 1263 Score = 91.7 bits (46), Expect = 3e-15 Identities = 162/201 (80%) Strand = Plus / Minus Query: 335 gaaatcaacactaggcccctccgtggagcagagcatgaaacctatcactccgcttgggta 394 |||||||||| ||| ||||| || ||||||||||||||||| || || || ||||| || Sbjct: 866 gaaatcaacagcaggtccctcagtcgagcagagcatgaaaccaataacaccacttggata 807 Query: 395 tgtgggcaccgtagtccatgcgtagttcaccgagcccttgaaaacctggcgacagttggt 454 || || || || ||||| || ||||| || ||||| ||||| | |||||| ||||| | Sbjct: 806 agtaggaactgtggtccaggcatagttgactgagcctttgaagatctggcggcagtttga 747 Query: 455 gacaatgtcttctatgatgtgcatgtgcagccatatgctctccgcctgggtgcagacgac 514 || || ||||| || ||||||||||| ||||| |||||||||||||| || ||||| || Sbjct: 746 cacgatatcttcaattatgtgcatgtgaagccaaatgctctccgcctgcgtacagacaac 687 Query: 515 cccgcccggacgcanagccct 535 ||| || |||| || |||||| Sbjct: 686 ccctccaggacacagagccct 666 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 207 tcgatgaccctcctcgcgaatgatggcaaacaaaacgatgcagtgtggaactcggagttg 266 ||||| |||||| | || || ||||||||||| |||||||||| ||| | ||| |||||| Sbjct: 994 tcgatcaccctcttagcaaaagatggcaaacagaacgatgcagagtgaatctcagagttg 935 Query: 267 tagaactt 274 |||||||| Sbjct: 934 tagaactt 927
>dbj|AB072915.2| Malus x domestica MdSPDS1 mRNA forspermidine synthase, complete cds Length = 1407 Score = 89.7 bits (45), Expect = 1e-14 Identities = 114/137 (83%) Strand = Plus / Minus Query: 366 agcatgaaacctatcactccgcttgggtatgtgggcaccgtagtccatgcgtagttcacc 425 ||||| ||||| ||||| || ||||| ||||| || || ||||||||||||||||| || Sbjct: 982 agcataaaaccaatcaccccacttggatatgtagggactgtagtccatgcgtagttgaca 923 Query: 426 gagcccttgaaaacctggcgacagttggtgacaatgtcttctatgatgtgcatgtgcagc 485 ||||| ||||| | || ||||||||| | ||||| || || |||||||||||||| ||| Sbjct: 922 gagcctttgaatatctcgcgacagtttgccacaatatcctcaatgatgtgcatgtgaagc 863 Query: 486 catatgctctccgcctg 502 ||||| ||||| ||||| Sbjct: 862 catatactctctgcctg 846
>gb|DQ074728.1| Fragaria x ananassa spermidine synthase mRNA, partial cds Length = 378 Score = 81.8 bits (41), Expect = 3e-12 Identities = 169/212 (79%) Strand = Plus / Minus Query: 408 gtccatgcgtagttcaccgagcccttgaaaacctggcgacagttggtgacaatgtcttct 467 ||||||||||||| || ||||| ||||| | |||| | ||||| | ||||| || || Sbjct: 365 gtccatgcgtagtcgacagagcctttgaatatctggtggcagtttgacacaatatcctca 306 Query: 468 atgatgtgcatgtgcagccatatgctctccgcctgggtgcagacgaccccgcccggacgc 527 |||||||||||||| |||||||| ||||| ||||||||||| || || || |||||| | Sbjct: 305 atgatgtgcatgtgaagccatatactctctgcctgggtgcacacaactcctcccggaagg 246 Query: 528 anagccctggagacggactggaagaaaggcttctcgaaaagctcctgagcagggcctact 587 | ||| | | || ||||||||||| |||||||| |||||||| || ||||| |||| Sbjct: 245 agagcatttgctaccgactggaagaacggcttctcaaaaagctcttgtgcaggacctatg 186 Query: 588 ggatcggaggaatcgacgatcactgcatcata 619 ||||| || || || || || ||||||||||| Sbjct: 185 ggatcagaagagtccacaatgactgcatcata 154
>emb|AJ345003.1|STU345003 Solanum tuberosum mRNA for spermidine synthase (SpdSy gene) Length = 1347 Score = 79.8 bits (40), Expect = 1e-11 Identities = 124/152 (81%) Strand = Plus / Minus Query: 351 ccctccgtggagcagagcatgaaacctatcactccgcttgggtatgtgggcaccgtagtc 410 ||||| || ||||||||||||||||| |||| || ||||| || || || || |||||| Sbjct: 1010 ccctcagtagagcagagcatgaaaccaatcatgccacttggataagtaggaacagtagtc 951 Query: 411 catgcgtagttcaccgagcccttgaaaacctggcgacagttggtgacaatgtcttctatg 470 || || ||||| || ||||| ||||| | |||||| || || | ||||| ||||| || Sbjct: 950 caagcatagttgactgagcctttgaagatctggcggcaattagcaacaatttcttcaatt 891 Query: 471 atgtgcatgtgcagccatatgctctccgcctg 502 ||||||||||| |||||||||||||| ||||| Sbjct: 890 atgtgcatgtgaagccatatgctctcagcctg 859 Score = 48.1 bits (24), Expect = 0.035 Identities = 57/68 (83%) Strand = Plus / Minus Query: 207 tcgatgaccctcctcgcgaatgatggcaaacaaaacgatgcagtgtggaactcggagttg 266 ||||| |||||| | ||||||||||||||||| || ||||| ||| | ||| |||||| Sbjct: 1151 tcgatcaccctcttggcgaatgatggcaaacagaatgatgcttggtgaatctcagagttg 1092 Query: 267 tagaactt 274 |||||||| Sbjct: 1091 tagaactt 1084
>gb|BT014110.1| Lycopersicon esculentum clone 133214F, mRNA sequence Length = 1174 Score = 75.8 bits (38), Expect = 2e-10 Identities = 148/185 (80%) Strand = Plus / Minus Query: 351 ccctccgtggagcagagcatgaaacctatcactccgcttgggtatgtgggcaccgtagtc 410 ||||| || ||||||| ||||||||| || || || ||||| || || || || || ||| Sbjct: 792 ccctcggtagagcagaccatgaaaccaataacaccacttggataagtaggaactgtggtc 733 Query: 411 catgcgtagttcaccgagcccttgaaaacctggcgacagttggtgacaatgtcttctatg 470 || || ||||| || ||||| ||||| | |||||| ||||| | || || ||||| || Sbjct: 732 caggcatagttgacagagcctttgaagatctggcggcagtttgccacgatatcttcaatt 673 Query: 471 atgtgcatgtgcagccatatgctctccgcctgggtgcagacgaccccgcccggacgcana 530 ||||||||||| |||||||||||||| ||||| || ||||| ||||| || |||||| | Sbjct: 672 atgtgcatgtgaagccatatgctctcagcctgagtacagacaacccctccacgacgcaga 613 Query: 531 gccct 535 ||||| Sbjct: 612 gccct 608 Score = 48.1 bits (24), Expect = 0.035 Identities = 39/44 (88%) Strand = Plus / Minus Query: 231 ggcaaacaaaacgatgcagtgtggaactcggagttgtagaactt 274 |||||||| |||||||||| ||| | ||| |||||||||||||| Sbjct: 912 ggcaaacagaacgatgcagagtgaatctcagagttgtagaactt 869
>gb|AF043108.1|AF043108 Pisum sativum spermidine synthase 1 (SPDSYN1) mRNA, complete cds Length = 1357 Score = 75.8 bits (38), Expect = 2e-10 Identities = 229/293 (78%) Strand = Plus / Minus Query: 327 ggatgctggaaatcaacactaggcccctccgtggagcagagcatgaaacctatcactccg 386 ||||||| ||||||||| ||| ||||| || ||||| ||||| ||||| |||| || Sbjct: 934 ggatgcttgaaatcaacggaaggtccctcggttgagcaaagcataaaaccaatcatccca 875 Query: 387 cttgggtatgtgggcaccgtagtccatgcgtagttcaccgagcccttgaaaacctggcga 446 ||||||||||| || || || ||||| || ||||| || || || ||||| |||||||| Sbjct: 874 cttgggtatgtaggaactgtggtccaagcatagttgacagaccctttgaatacctggcgg 815 Query: 447 cagttggtgacaatgtcttctatgatgtgcatgtgcagccatatgctctccgcctgggtg 506 ||||| |||||||| || ||||||||||| || |||||||| || ||||| || || Sbjct: 814 cagttcaccacaatgtcctcaatgatgtgcatatgaagccatatactttccgcttgagta 755 Query: 507 cagacgaccccgcccggacgcanagccctggagacggactggaagaaaggcttctcgaaa 566 || || || || || ||||| | |||||| | || |||| || || ||||| || ||| Sbjct: 754 cacacaactcctcctggacgaagagcccttgcaaccgactcaaaaaagggcttttcaaaa 695 Query: 567 agctcctgagcagggcctactggatcggaggaatcgacgatcactgcatcata 619 ||||| ||||||||||| | ||||| || ||||| || || ||||||||||| Sbjct: 694 agctcttgagcagggccaataggatcagatgaatccactataactgcatcata 642
>dbj|AB100310.1| Petunia x hybrida spds mRNA for spermidine synthase, complete cds Length = 1249 Score = 71.9 bits (36), Expect = 2e-09 Identities = 123/152 (80%) Strand = Plus / Minus Query: 351 ccctccgtggagcagagcatgaaacctatcactccgcttgggtatgtgggcaccgtagtc 410 ||||| || ||||||||||||||||| |||| || ||||| || || || || |||||| Sbjct: 866 ccctcggtagagcagagcatgaaaccgatcataccacttggataagtaggaacagtagtc 807 Query: 411 catgcgtagttcaccgagcccttgaaaacctggcgacagttggtgacaatgtcttctatg 470 ||||| || || || ||||| || || | |||||| |||||||| ||||| | || || Sbjct: 806 catgcataattgactgagcctttaaagatctggcggcagttggtaacaatattctcaatt 747 Query: 471 atgtgcatgtgcagccatatgctctccgcctg 502 |||| |||||| |||||||||||||| ||||| Sbjct: 746 atgtccatgtgaagccatatgctctcagcctg 715
>dbj|AB006690.1| Hyoscyamus niger mRNA for spermidine synthase 1, complete cds Length = 1213 Score = 71.9 bits (36), Expect = 2e-09 Identities = 123/152 (80%) Strand = Plus / Minus Query: 351 ccctccgtggagcagagcatgaaacctatcactccgcttgggtatgtgggcaccgtagtc 410 ||||| || ||||| ||||||||||| |||| || || || || || || || |||||| Sbjct: 843 ccctcagtagagcaaagcatgaaaccaatcatgccactcggataagtaggaacagtagtc 784 Query: 411 catgcgtagttcaccgagcccttgaaaacctggcgacagttggtgacaatgtcttctatg 470 ||||| ||||| || ||||| ||||| | |||||| || || | ||||| ||||| || Sbjct: 783 catgcatagttgacagagcctttgaagatctggcggcaattagcaacaatttcttcaatt 724 Query: 471 atgtgcatgtgcagccatatgctctccgcctg 502 ||||||||||| |||||||||||||| ||||| Sbjct: 723 atgtgcatgtgaagccatatgctctcagcctg 692 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 207 tcgatgaccctcctcgcgaatgatggcaaacaaaacgatgc 247 ||||| |||||| | || |||||||||||||| |||||||| Sbjct: 984 tcgatcaccctcttggcaaatgatggcaaacagaacgatgc 944
>gb|AF321139.1| Nicotiana tabacum spermidine synthase mRNA, complete cds Length = 1272 Score = 69.9 bits (35), Expect = 1e-08 Identities = 116/143 (81%) Strand = Plus / Minus Query: 360 gagcagagcatgaaacctatcactccgcttgggtatgtgggcaccgtagtccatgcgtag 419 ||||||||||||||||| |||| || ||||| || || || || ||||||||||| ||| Sbjct: 809 gagcagagcatgaaaccaatcataccacttggataagtaggaactgtagtccatgcatag 750 Query: 420 ttcaccgagcccttgaaaacctggcgacagttggtgacaatgtcttctatgatgtgcatg 479 || || ||||| ||||| | ||||| || |||| || || ||||| || ||||||||| Sbjct: 749 ttaactgagcctttgaagatttggcggcaattggcaacgatttcttcaattatgtgcatg 690 Query: 480 tgcagccatatgctctccgcctg 502 || |||||||| ||||| ||||| Sbjct: 689 tgaagccatatactctcagcctg 667
>gb|AF043109.1|AF043109 Pisum sativum spermidine synthase 2 (SPDSYN2) mRNA, complete cds Length = 1279 Score = 69.9 bits (35), Expect = 1e-08 Identities = 199/254 (78%) Strand = Plus / Minus Query: 327 ggatgctggaaatcaacactaggcccctccgtggagcagagcatgaaacctatcactccg 386 ||||||| |||||||||| ||| |||||||| ||||| ||||| ||||| |||| || Sbjct: 943 ggatgcttgaaatcaacaagaggtccctccgttgagcaaagcataaaaccaatcatccca 884 Query: 387 cttgggtatgtgggcaccgtagtccatgcgtagttcaccgagcccttgaaaacctggcga 446 || |||||||| || || |||||||| || ||||| || ||||| || || | || ||| Sbjct: 883 ctagggtatgtaggaactgtagtccaagcatagttgacagagcctttaaagatatgccga 824 Query: 447 cagttggtgacaatgtcttctatgatgtgcatgtgcagccatatgctctccgcctgggtg 506 || |||| |||||||| || || || | ||| || |||||||| || || ||||| ||| Sbjct: 823 caattggatacaatgtcctcgattatatccatatgaagccatatactttcagcctgagtg 764 Query: 507 cagacgaccccgcccggacgcanagccctggagacggactggaagaaaggcttctcgaaa 566 || | || || || ||||| | |||||| | || ||||| || || ||||| |||||| Sbjct: 763 cacataactcctcctggacggagagcccttgctaccgactgaaaaaacggcttttcgaaa 704 Query: 567 agctcctgagcagg 580 |||||||||||||| Sbjct: 703 agctcctgagcagg 690
>dbj|AB015599.1| Coffea arabica mRNA for spermidine synthase, complete cds Length = 1383 Score = 69.9 bits (35), Expect = 1e-08 Identities = 116/143 (81%) Strand = Plus / Minus Query: 348 ggcccctccgtggagcagagcatgaaacctatcactccgcttgggtatgtgggcaccgta 407 |||||||| || || |||||||||||||| || ||||| |||||||| || || || ||| Sbjct: 828 ggcccctcagtagaacagagcatgaaaccaattactccacttgggtaagtaggaactgta 769 Query: 408 gtccatgcgtagttcaccgagcccttgaaaacctggcgacagttggtgacaatgtcttct 467 |||||||| ||||| || || |||||||| | ||| | ||||| | || || ||||| Sbjct: 768 gtccatgcatagttgactgatcccttgaagatctgcctgcagtttgcaacgatatcttcg 709 Query: 468 atgatgtgcatgtgcagccatat 490 || ||||||||||| |||||||| Sbjct: 708 ataatgtgcatgtgaagccatat 686 Score = 40.1 bits (20), Expect = 8.6 Identities = 56/68 (82%) Strand = Plus / Minus Query: 207 tcgatgaccctcctcgcgaatgatggcaaacaaaacgatgcagtgtggaactcggagttg 266 ||||||||| || | || || ||||||||||| || | ||||| |||| ||| |||||| Sbjct: 969 tcgatgaccttctttgcaaaagatggcaaacagaaagctgcagaatggatctcagagttg 910 Query: 267 tagaactt 274 |||||||| Sbjct: 909 tagaactt 902
>gb|AY705439.1| Silene latifolia spermidine synthase Y mRNA, partial cds Length = 700 Score = 67.9 bits (34), Expect = 4e-08 Identities = 159/201 (79%) Strand = Plus / Minus Query: 390 gggtatgtgggcaccgtagtccatgcgtagttcaccgagcccttgaaaacctggcgacag 449 |||||||| || || ||||||||||| ||||| |||||||||||||||| || ||| ||| Sbjct: 258 gggtatgttggaactgtagtccatgcatagttaaccgagcccttgaaaatctcgcggcag 199 Query: 450 ttggtgacaatgtcttctatgatgtgcatgtgcagccatatgctctccgcctgggtgcag 509 | | ||||| | ||| || || |||||||| |||||||| || || || |||||||| Sbjct: 198 ctagaaacaatattttcgattatatgcatgtgaagccatatactttcagcttgggtgcaa 139 Query: 510 acgaccccgcccggacgcanagccctggagacggactggaagaaaggcttctcgaaaagc 569 || || || || || || | |||| | | ||||||| ||| || ||||| || |||||| Sbjct: 138 acaactcctcctggtcgaagagcctttgcaacggactcgaaaaagggcttttcaaaaagc 79 Query: 570 tcctgagcagggcctactgga 590 |||| |||||||||| |||| Sbjct: 78 tcctttgcagggcctattgga 58 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 213 accctcctcgcgaatgatggcaaacaaaa 241 |||||| | |||||||||||||||||||| Sbjct: 508 accctctttgcgaatgatggcaaacaaaa 480 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 213 accctcctcgcgaatgatggcaaacaaaa 241 |||||| | |||||||||||||||||||| Sbjct: 426 accctctttgcgaatgatggcaaacaaaa 398
>gb|AY705438.1| Silene latifolia spermidine synthase Y gene, partial cds Length = 4133 Score = 65.9 bits (33), Expect = 2e-07 Identities = 155/196 (79%) Strand = Plus / Minus Query: 390 gggtatgtgggcaccgtagtccatgcgtagttcaccgagcccttgaaaacctggcgacag 449 |||||||| || || ||||||||||| ||||| |||||||||||||||| || ||| ||| Sbjct: 3324 gggtatgttggaactgtagtccatgcatagttaaccgagcccttgaaaatctcgcggcag 3265 Query: 450 ttggtgacaatgtcttctatgatgtgcatgtgcagccatatgctctccgcctgggtgcag 509 | | ||||| | ||| || || |||||||| |||||||| || || || |||||||| Sbjct: 3264 ctagaaacaatattttcgattatatgcatgtgaagccatatactttcagcttgggtgcaa 3205 Query: 510 acgaccccgcccggacgcanagccctggagacggactggaagaaaggcttctcgaaaagc 569 || || || || || || | |||| | | ||||||| ||| || ||||| || |||||| Sbjct: 3204 acaactcctcctggtcgaagagcctttgcaacggactcgaaaaagggcttttcaaaaagc 3145 Query: 570 tcctgagcagggccta 585 |||| |||||||||| Sbjct: 3144 tcctttgcagggccta 3129 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 213 accctcctcgcgaatgatggcaaacaaaa 241 |||||| | |||||||||||||||||||| Sbjct: 4105 accctctttgcgaatgatggcaaacaaaa 4077
>emb|Y08253.1|DSSS2 D.stramonium mRNA for spermidine synthase 2 Length = 1217 Score = 63.9 bits (32), Expect = 6e-07 Identities = 122/152 (80%) Strand = Plus / Minus Query: 351 ccctccgtggagcagagcatgaaacctatcactccgcttgggtatgtgggcaccgtagtc 410 ||||| || ||||| ||||||||||| |||| || ||||| || || || || |||||| Sbjct: 841 ccctcagtagagcacagcatgaaaccaatcatgccacttggataagtaggaacagtagtc 782 Query: 411 catgcgtagttcaccgagcccttgaaaacctggcgacagttggtgacaatgtcttctatg 470 ||||| ||||| || ||||| ||||| | | ||| || || | ||||| ||||| || Sbjct: 781 catgcatagttgacggagcctttgaagatttcgcggcaattagcaacaatctcttcaatt 722 Query: 471 atgtgcatgtgcagccatatgctctccgcctg 502 ||||||||||| |||||||||||||| ||||| Sbjct: 721 atgtgcatgtgaagccatatgctctcagcctg 690
>dbj|AB072917.2| Malus x domestica MdSPDS2b mRNA forspermidine synthase, complete cds Length = 1276 Score = 58.0 bits (29), Expect = 4e-05 Identities = 101/125 (80%) Strand = Plus / Minus Query: 366 agcatgaaacctatcactccgcttgggtatgtgggcaccgtagtccatgcgtagttcacc 425 ||||| ||||| ||||| || ||||| ||||| || || ||||||||||| ||||| || Sbjct: 867 agcataaaaccaatcaccccacttggatatgtagggactgtagtccatgcatagttgaca 808 Query: 426 gagcccttgaaaacctggcgacagttggtgacaatgtcttctatgatgtgcatgtgcagc 485 ||||| ||||| |||| |||||||| ||||| || || ||||||| |||||| ||| Sbjct: 807 gagcctttgaatacctcacgacagttttccacaatatcctcaatgatgtccatgtgaagc 748 Query: 486 catat 490 ||||| Sbjct: 747 catat 743
>dbj|AB072916.2| Malus x domestica MdSPDS2a mRNA forspermidine synthase, complete cds Length = 1359 Score = 58.0 bits (29), Expect = 4e-05 Identities = 101/125 (80%) Strand = Plus / Minus Query: 366 agcatgaaacctatcactccgcttgggtatgtgggcaccgtagtccatgcgtagttcacc 425 ||||| ||||| ||||| || ||||| ||||| || || ||||||||||| ||||| || Sbjct: 939 agcataaaaccaatcaccccacttggatatgtagggactgtagtccatgcatagttgaca 880 Query: 426 gagcccttgaaaacctggcgacagttggtgacaatgtcttctatgatgtgcatgtgcagc 485 ||||| ||||| |||| |||||||| ||||| || || ||||||| |||||| ||| Sbjct: 879 gagcctttgaatacctcacgacagttttccacaatatcctcaatgatgtccatgtgaagc 820 Query: 486 catat 490 ||||| Sbjct: 819 catat 815
>ref|NM_202171.1| Arabidopsis thaliana SPDS1 (SPERMIDINE SYNTHASE 1) AT1G23820 (SPDS1) transcript variant AT1G23820.2 mRNA, complete cds Length = 1347 Score = 48.1 bits (24), Expect = 0.035 Identities = 66/80 (82%) Strand = Plus / Minus Query: 408 gtccatgcgtagttcaccgagcccttgaaaacctggcgacagttggtgacaatgtcttct 467 ||||| || |||||||| || |||||||| | || || ||||||| ||||||||||| Sbjct: 917 gtccaagcatagttcacagaacccttgaagatctcacggcagttggaaacaatgtcttcg 858 Query: 468 atgatgtgcatgtgcagcca 487 ||||||| |||||| ||||| Sbjct: 857 atgatgtccatgtgaagcca 838
>ref|NM_102230.3| Arabidopsis thaliana SPDS1 (SPERMIDINE SYNTHASE 1) AT1G23820 (SPDS1) transcript variant AT1G23820.1 mRNA, complete cds Length = 1359 Score = 48.1 bits (24), Expect = 0.035 Identities = 66/80 (82%) Strand = Plus / Minus Query: 408 gtccatgcgtagttcaccgagcccttgaaaacctggcgacagttggtgacaatgtcttct 467 ||||| || |||||||| || |||||||| | || || ||||||| ||||||||||| Sbjct: 917 gtccaagcatagttcacagaacccttgaagatctcacggcagttggaaacaatgtcttcg 858 Query: 468 atgatgtgcatgtgcagcca 487 ||||||| |||||| ||||| Sbjct: 857 atgatgtccatgtgaagcca 838
>gb|AC124544.4| Mus musculus BAC clone RP23-266K17 from 8, complete sequence Length = 150266 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Plus Query: 420 ttcaccgagcccttgaaaacctgg 443 |||||||||||||||||||||||| Sbjct: 22555 ttcaccgagcccttgaaaacctgg 22578
>emb|AJ252215.1|ATH252215 Arabidopsis thaliana spdsyn1 gene for spermidine synthase, exons 1-9 Length = 2883 Score = 48.1 bits (24), Expect = 0.035 Identities = 66/80 (82%) Strand = Plus / Minus Query: 408 gtccatgcgtagttcaccgagcccttgaaaacctggcgacagttggtgacaatgtcttct 467 ||||| || |||||||| || |||||||| | || || ||||||| ||||||||||| Sbjct: 2123 gtccaagcatagttcacagaacccttgaagatctcacggcagttggaaacaatgtcttcg 2064 Query: 468 atgatgtgcatgtgcagcca 487 ||||||| |||||| ||||| Sbjct: 2063 atgatgtccatgtgaagcca 2044
>emb|AJ251296.1|ATH251296 Arabidopsis thaliana mRNA for spermidine synthase 1 (spdSyn1 gene) Length = 1218 Score = 48.1 bits (24), Expect = 0.035 Identities = 66/80 (82%) Strand = Plus / Minus Query: 408 gtccatgcgtagttcaccgagcccttgaaaacctggcgacagttggtgacaatgtcttct 467 ||||| || |||||||| || |||||||| | || || ||||||| ||||||||||| Sbjct: 851 gtccaagcatagttcacagaacccttgaagatctcacggcagttggaaacaatgtcttcg 792 Query: 468 atgatgtgcatgtgcagcca 487 ||||||| |||||| ||||| Sbjct: 791 atgatgtccatgtgaagcca 772
>gb|AY093360.1| Arabidopsis thaliana strong similarity to spermidine synthase (At1g23820) mRNA, complete cds Length = 1125 Score = 48.1 bits (24), Expect = 0.035 Identities = 66/80 (82%) Strand = Plus / Minus Query: 408 gtccatgcgtagttcaccgagcccttgaaaacctggcgacagttggtgacaatgtcttct 467 ||||| || |||||||| || |||||||| | || || ||||||| ||||||||||| Sbjct: 794 gtccaagcatagttcacagaacccttgaagatctcacggcagttggaaacaatgtcttcg 735 Query: 468 atgatgtgcatgtgcagcca 487 ||||||| |||||| ||||| Sbjct: 734 atgatgtccatgtgaagcca 715
>gb|AY062593.1| Arabidopsis thaliana Strong similarity to spermidine synthase (At1g23820; F5O8.38) mRNA, complete cds Length = 1258 Score = 48.1 bits (24), Expect = 0.035 Identities = 66/80 (82%) Strand = Plus / Minus Query: 408 gtccatgcgtagttcaccgagcccttgaaaacctggcgacagttggtgacaatgtcttct 467 ||||| || |||||||| || |||||||| | || || ||||||| ||||||||||| Sbjct: 862 gtccaagcatagttcacagaacccttgaagatctcacggcagttggaaacaatgtcttcg 803 Query: 468 atgatgtgcatgtgcagcca 487 ||||||| |||||| ||||| Sbjct: 802 atgatgtccatgtgaagcca 783
>emb|BX816056.1|CNS0ABL6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH25ZE12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 634 Score = 48.1 bits (24), Expect = 0.035 Identities = 66/80 (82%) Strand = Plus / Minus Query: 408 gtccatgcgtagttcaccgagcccttgaaaacctggcgacagttggtgacaatgtcttct 467 ||||| || |||||||| || |||||||| | || || ||||||| ||||||||||| Sbjct: 170 gtccaagcatagttcacagaacccttgaagatctcacggcagttggaaacaatgtcttcg 111 Query: 468 atgatgtgcatgtgcagcca 487 ||||||| |||||| ||||| Sbjct: 110 atgatgtccatgtgaagcca 91
>emb|BX814923.1|CNS0ABBK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS19ZC12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1259 Score = 48.1 bits (24), Expect = 0.035 Identities = 66/80 (82%) Strand = Plus / Minus Query: 408 gtccatgcgtagttcaccgagcccttgaaaacctggcgacagttggtgacaatgtcttct 467 ||||| || |||||||| || |||||||| | || || ||||||| ||||||||||| Sbjct: 850 gtccaagcatagttcacagaacccttgaagatctcacggcagttggaaacaatgtcttcg 791 Query: 468 atgatgtgcatgtgcagcca 487 ||||||| |||||| ||||| Sbjct: 790 atgatgtccatgtgaagcca 771
>emb|CT954231.1| Medicago truncatula chromosome 5 clone mth2-166e2, COMPLETE SEQUENCE Length = 122895 Score = 48.1 bits (24), Expect = 0.035 Identities = 155/199 (77%) Strand = Plus / Plus Query: 387 cttgggtatgtgggcaccgtagtccatgcgtagttcaccgagcccttgaaaacctggcga 446 ||||||||||| || ||||| ||||| || || || || ||||| ||||| || |||||| Sbjct: 71092 cttgggtatgtaggaaccgtggtccaggcataattgacagagcctttgaatacttggcga 71151 Query: 447 cagttggtgacaatgtcttctatgatgtgcatgtgcagccatatgctctccgcctgggtg 506 || || || ||||| || ||||| ||||| || |||||||| || || ||||| ||| Sbjct: 71152 caattcactacgatgtcctcgatgatatgcatatgaagccatatactttctgcctgagtg 71211 Query: 507 cagacgaccccgcccggacgcanagccctggagacggactggaagaaaggcttctcgaaa 566 || || || || || ||||| | |||||| | || |||| || || ||||| |||||| Sbjct: 71212 catacaacacctcctggacgaagagcccttgcaaccgactcaaaaaagggcttttcgaaa 71271 Query: 567 agctcctgagcagggccta 585 ||||| |||||||| |||| Sbjct: 71272 agctcttgagcaggaccta 71290
>gb|AC005990.1|F5O8 Arabidopsis thaliana chromosome 1 BAC F5O8 sequence, complete sequence Length = 99923 Score = 48.1 bits (24), Expect = 0.035 Identities = 66/80 (82%) Strand = Plus / Minus Query: 408 gtccatgcgtagttcaccgagcccttgaaaacctggcgacagttggtgacaatgtcttct 467 ||||| || |||||||| || |||||||| | || || ||||||| ||||||||||| Sbjct: 96543 gtccaagcatagttcacagaacccttgaagatctcacggcagttggaaacaatgtcttcg 96484 Query: 468 atgatgtgcatgtgcagcca 487 ||||||| |||||| ||||| Sbjct: 96483 atgatgtccatgtgaagcca 96464
>gb|AC134615.5| Mus musculus BAC clone RP23-148H3 from 8, complete sequence Length = 199454 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Plus Query: 420 ttcaccgagcccttgaaaacctgg 443 |||||||||||||||||||||||| Sbjct: 164482 ttcaccgagcccttgaaaacctgg 164505
>ref|NM_203110.1| Arabidopsis thaliana unknown protein AT5G26760 transcript variant AT5G26760.2 mRNA, complete cds Length = 2528 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 173 tcaccatcttcataagaattag 194 |||||||||||||||||||||| Sbjct: 1300 tcaccatcttcataagaattag 1279
>ref|NM_122558.3| Arabidopsis thaliana unknown protein AT5G26760 transcript variant AT5G26760.1 mRNA, complete cds Length = 2820 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 173 tcaccatcttcataagaattag 194 |||||||||||||||||||||| Sbjct: 1510 tcaccatcttcataagaattag 1489
>gb|BT015786.1| Arabidopsis thaliana At5g26760 mRNA, complete cds Length = 1293 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 173 tcaccatcttcataagaattag 194 |||||||||||||||||||||| Sbjct: 254 tcaccatcttcataagaattag 233
>gb|AY090972.1| Arabidopsis thaliana At5g26760 mRNA sequence Length = 2755 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 173 tcaccatcttcataagaattag 194 |||||||||||||||||||||| Sbjct: 1510 tcaccatcttcataagaattag 1489
>emb|AJ000732.1|ATAJ732 Arabidopsis thaliana ASKalpha gene Length = 8645 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 173 tcaccatcttcataagaattag 194 |||||||||||||||||||||| Sbjct: 1819 tcaccatcttcataagaattag 1798
>emb|AL596130.13| Mouse DNA sequence from clone RP23-209O5 on chromosome 11, complete sequence Length = 203000 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 125 ccctgtgtcagaaaccaaagca 146 |||||||||||||||||||||| Sbjct: 56904 ccctgtgtcagaaaccaaagca 56883
>gb|AF007270.1|F2P16 Arabidopsis thaliana BAC F2P16, complete sequence Length = 110946 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 173 tcaccatcttcataagaattag 194 |||||||||||||||||||||| Sbjct: 6885 tcaccatcttcataagaattag 6906
>gb|AC107760.9| Mus musculus chromosome 15, clone RP23-189K4, complete sequence Length = 178900 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 566 aagctcctgagcagggcctac 586 ||||||||||||||||||||| Sbjct: 49748 aagctcctgagcagggcctac 49728
>gb|AC113292.6| Mus musculus chromosome 15, clone RP23-418M3, complete sequence Length = 218109 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 566 aagctcctgagcagggcctac 586 ||||||||||||||||||||| Sbjct: 50070 aagctcctgagcagggcctac 50090
>emb|CR381602.30| Zebrafish DNA sequence from clone DKEY-183M22 in linkage group 6, complete sequence Length = 192136 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 457 caatgtcttctatgatgtgca 477 ||||||||||||||||||||| Sbjct: 61193 caatgtcttctatgatgtgca 61213
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 554 aggcttctcgaaaagctcctg 574 ||||||||||||||||||||| Sbjct: 5737168 aggcttctcgaaaagctcctg 5737148
>dbj|AP005416.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0094P23 Length = 149341 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 554 aggcttctcgaaaagctcctg 574 ||||||||||||||||||||| Sbjct: 91793 aggcttctcgaaaagctcctg 91773
>emb|AL935047.12| Zebrafish DNA sequence from clone DKEY-20L10, complete sequence Length = 201929 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 457 caatgtcttctatgatgtgca 477 ||||||||||||||||||||| Sbjct: 72333 caatgtcttctatgatgtgca 72353
>gb|AF030001.1|MMMHC29N7 Mus musculus major histocompatibility locus class III region:butyrophilin-like protein gene, partial cds; Notch4, PBX2, RAGE, lysophatidic acid acyl transferase-alpha, palmitoyl-protein thioesterase 2 (PPT2), CREB-RP, and tenascin X (TNX) genes, complete cds; and CYP21OHB pseudogene, complete sequence Length = 201964 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 taagacagatttctccctgt 130 |||||||||||||||||||| Sbjct: 111859 taagacagatttctccctgt 111878
>gb|AY623117.1| Homo sapiens RAD54-like (S. cerevisiae) (RAD54L) gene, complete cds Length = 33796 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 atgctgaagacaggatgctg 334 |||||||||||||||||||| Sbjct: 14864 atgctgaagacaggatgctg 14883
>emb|CT009767.6| Mouse DNA sequence from clone RP23-24A13 on chromosome 17, complete sequence Length = 221442 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 taagacagatttctccctgt 130 |||||||||||||||||||| Sbjct: 192917 taagacagatttctccctgt 192936
>gb|AC124684.3| Mus musculus BAC clone RP24-375D13 from chromosome 1, complete sequence Length = 167927 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 ttcagtcaccatcttcataa 187 |||||||||||||||||||| Sbjct: 38875 ttcagtcaccatcttcataa 38894
>gb|AC079113.4| Homo sapiens BAC clone RP11-81E15 from 7, complete sequence Length = 94669 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 tcttcataagaattagttag 198 |||||||||||||||||||| Sbjct: 63904 tcttcataagaattagttag 63885
>emb|AL355530.6| Human DNA sequence from clone RP11-338L11 on chromosome 10 Contains the 5' end of the gene for novel gene (KIAA0534) and a CpG island, complete sequence Length = 196934 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 gaagacaggatgctggaaat 339 |||||||||||||||||||| Sbjct: 193755 gaagacaggatgctggaaat 193774
>emb|AL158835.11| Human DNA sequence from clone RP11-383C5 on chromosome 10 Contains a aldolase A, fructose-bisphosphate pseudogene 2, four novel genes, the gene for erythroid differentiation-related factor 1 (EDRF1), the 3' end of the MMP21 gene for matrix metalloproteinase 21 and one CpG island, complete sequence Length = 174530 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 agacagatttctccctgtgt 132 |||||||||||||||||||| Sbjct: 143603 agacagatttctccctgtgt 143622
>emb|AL121602.34|HSDJ636H5 Human DNA sequence from clone RP4-636H5 on chromosome 1 Contains the RAD54L gene for RAD54-like (S. cerevisiae), the 3' end of the gene for MUF1 protein (MUF1) and a CpG island, complete sequence Length = 69882 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 atgctgaagacaggatgctg 334 |||||||||||||||||||| Sbjct: 32028 atgctgaagacaggatgctg 32047
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 579 gggcctactggatcggaggaatcgacgatcac 610 ||||| || ||||||| ||||||||||||||| Sbjct: 204726 gggcccaccggatcggtggaatcgacgatcac 204757
>gb|AC016042.8| Homo sapiens chromosome 10 clone RP11-87P3, complete sequence Length = 184689 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 gaagacaggatgctggaaat 339 |||||||||||||||||||| Sbjct: 54636 gaagacaggatgctggaaat 54617
>gb|AC018552.6| Homo sapiens chromosome 16 clone RP11-405F3, complete sequence Length = 152156 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 gcccctccgtggagcagagc 368 |||||||||||||||||||| Sbjct: 102371 gcccctccgtggagcagagc 102390
>gb|AC157819.5| Mus musculus chromosome 3, clone RP24-273H20, complete sequence Length = 151601 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 315 atgctgaagacaggatgctggaaatcaa 342 ||||||||||||||| ||||||| |||| Sbjct: 65897 atgctgaagacaggaagctggaagtcaa 65924
>emb|BX072555.14| Zebrafish DNA sequence from clone DKEY-30O19 in linkage group 22, complete sequence Length = 227616 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 tgggcttattgcaagctaat 76 |||||||||||||||||||| Sbjct: 37817 tgggcttattgcaagctaat 37836
>gb|AC006289.1|AC006289 Mus musculus chromosome 17, clone 29_N_7, complete sequence Length = 201986 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 taagacagatttctccctgt 130 |||||||||||||||||||| Sbjct: 111880 taagacagatttctccctgt 111899
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 579 gggcctactggatcggaggaatcgacgatcac 610 ||||| || ||||||| ||||||||||||||| Sbjct: 222970 gggcccaccggatcggtggaatcgacgatcac 223001
>gb|AE000666.1| Methanothermobacter thermautotrophicus str. Delta H, complete genome Length = 1751377 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 agtattcgtcatcctcgatg 317 |||||||||||||||||||| Sbjct: 406002 agtattcgtcatcctcgatg 406021
>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome Length = 4096345 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 490 tgctctccgcctgggtgcagacga 513 ||||||||||||||| |||||||| Sbjct: 796274 tgctctccgcctgggcgcagacga 796297
>gb|AC147236.3| Mus musculus BAC clone RP23-357C20 from 1, complete sequence Length = 217902 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 ttcagtcaccatcttcataa 187 |||||||||||||||||||| Sbjct: 60048 ttcagtcaccatcttcataa 60029
>gb|AC103937.16| Mus musculus chromosome 3, clone RP23-229C5, complete sequence Length = 179805 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 315 atgctgaagacaggatgctggaaatcaa 342 ||||||||||||||| ||||||| |||| Sbjct: 139154 atgctgaagacaggaagctggaagtcaa 139181
>gb|AC117439.5| Homo sapiens 3 BAC RP11-183P11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 172676 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 gccctggtttcagtcaccat 179 |||||||||||||||||||| Sbjct: 22463 gccctggtttcagtcaccat 22444 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,582,652 Number of Sequences: 3902068 Number of extensions: 4582652 Number of successful extensions: 78902 Number of sequences better than 10.0: 77 Number of HSP's better than 10.0 without gapping: 76 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 78680 Number of HSP's gapped (non-prelim): 219 length of query: 630 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 607 effective length of database: 17,143,297,704 effective search space: 10405981706328 effective search space used: 10405981706328 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)