>CLCC_ARATH (Q96282) Chloride channel protein CLC-c (AtCLC-c)|
          Length = 779

 Score =  170 bits (430), Expect = 3e-42
 Identities = 84/116 (72%), Positives = 97/116 (83%)
 Frame = -3

Query: 564  RNFMKEKVKTSGSFVLRRFGAFDFAKPGSGKGMKIEDLDFTEEEMEMYVDLHPITNTSPY 385
            + F K++  T GS +LR   A DF K G GKG+KIEDLD +EEEMEMYVDLHPITNTSPY
Sbjct: 661  KKFSKQRT-TFGSQILRSCKARDFGKAGLGKGLKIEDLDLSEEEMEMYVDLHPITNTSPY 719

Query: 384  TVVETMSLAKAAVLFRALGLRHLLVVPKTPGRFPIVGILTRHDLMPEHIHGLFPNL 217
            TV+ET+SLAKAA+LFR LGLRHL VVPKTPGR PIVGILTRHD MPEH+ GL+P++
Sbjct: 720  TVLETLSLAKAAILFRQLGLRHLCVVPKTPGRPPIVGILTRHDFMPEHVLGLYPHI 775

>CLCG_ARATH (P60300) Putative chloride channel-like protein CLC-g|
          Length = 763

 Score =  145 bits (366), Expect = 8e-35
 Identities = 72/119 (60%), Positives = 90/119 (75%)
 Frame = -3

Query: 564 RNFMKEKVKTSGSFVLRRFGAFDFAKPGSGKGMKIEDLDFTEEEMEMYVDLHPITNTSPY 385
           R FM   V    +  L +F A +FAK GSG+  KIED++ +EEE+ MY+DLHP +N SPY
Sbjct: 633 RVFMPSPVACDSN-TLSQFKAEEFAKKGSGRSDKIEDVELSEEELNMYLDLHPFSNASPY 691

Query: 384 TVVETMSLAKAAVLFRALGLRHLLVVPKTPGRFPIVGILTRHDLMPEHIHGLFPNLRKS 208
           TVVETMSLAKA +LFR +G+RHLLV+PKT  R P+VGILTRHD MPEHI GL P++ +S
Sbjct: 692 TVVETMSLAKALILFREVGIRHLLVIPKTSNRPPVVGILTRHDFMPEHILGLHPSVSRS 750

>CLCA_ARATH (P92941) Chloride channel protein CLC-a (AtCLC-a)|
          Length = 775

 Score =  107 bits (267), Expect = 2e-23
 Identities = 59/120 (49%), Positives = 80/120 (66%), Gaps = 2/120 (1%)
 Frame = -3

Query: 564  RNFMKEKVKTSGSFVLRRFGAFDFAKPGSGKGMKIEDLDFTEEEMEMYVDLHPITNTSPY 385
            R F+ EK +T    V  +F   + A+    +    +D+  T  EM++YVDLHP+TNT+PY
Sbjct: 653  RWFLNEKRRTEEWEVREKFTPVELAE----REDNFDDVAITSSEMQLYVDLHPLTNTTPY 708

Query: 384  TVVETMSLAKAAVLFRALGLRHLLVVPK--TPGRFPIVGILTRHDLMPEHIHGLFPNLRK 211
            TVV++MS+AKA VLFR++GLRHLLVVPK    G  P++GILTR DL   +I   FP+L K
Sbjct: 709  TVVQSMSVAKALVLFRSVGLRHLLVVPKIQASGMSPVIGILTRQDLRAYNILQAFPHLDK 768

>CLCB_ARATH (P92942) Chloride channel protein CLC-b (AtCLC-b)|
          Length = 780

 Score =  107 bits (266), Expect = 3e-23
 Identities = 62/121 (51%), Positives = 78/121 (64%), Gaps = 2/121 (1%)
 Frame = -3

Query: 564  RNFMKEKVKTSGSFVLRRFGAFDFAKPGSGKGMKIEDLDFTEEEMEMYVDLHPITNTSPY 385
            R F+ EK +T    V  +F   + A+    +    +D+  T  EMEMYVDLHP+TNT+PY
Sbjct: 658  RWFLTEKRRTEEWEVREKFPWDELAE----REDNFDDVAITSAEMEMYVDLHPLTNTTPY 713

Query: 384  TVVETMSLAKAAVLFRALGLRHLLVVPK--TPGRFPIVGILTRHDLMPEHIHGLFPNLRK 211
            TV+E MS+AKA VLFR +GLRHLL+VPK    G  P+VGILTR DL   +I   FP L K
Sbjct: 714  TVMENMSVAKALVLFRQVGLRHLLIVPKIQASGMCPVVGILTRQDLRAYNILQAFPLLEK 773

Query: 210  S 208
            S
Sbjct: 774  S 774

>CLCD_ARATH (P92943) Chloride channel protein CLC-d (AtCLC-d)|
          Length = 792

 Score = 91.7 bits (226), Expect = 1e-18
 Identities = 47/85 (55%), Positives = 60/85 (70%)
 Frame = -3

Query: 498 DFAKPGSGKGMKIEDLDFTEEEMEMYVDLHPITNTSPYTVVETMSLAKAAVLFRALGLRH 319
           +FAKP S KG+ IED+  T +++EMY+DL P  N SPY V E MSL K   LFR LGLRH
Sbjct: 672 EFAKPVSSKGLCIEDIHLTSDDLEMYIDLAPFLNPSPYVVPEDMSLTKVYNLFRQLGLRH 731

Query: 318 LLVVPKTPGRFPIVGILTRHDLMPE 244
           L VVP+ P R  ++G++TR DL+ E
Sbjct: 732 LFVVPR-PSR--VIGLITRKDLLIE 753

>CLCN7_HUMAN (P51798) Chloride channel protein 7 (ClC-7)|
          Length = 805

 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 40/104 (38%), Positives = 58/104 (55%), Gaps = 3/104 (2%)
 Frame = -3

Query: 555 MKEKV---KTSGSFVLRRFGAFDFAKPGSGKGMKIEDLDFTEEEMEMYVDLHPITNTSPY 385
           +K KV   +++   V RR    DF +    +   I+ +  +++E E  +DL    N SPY
Sbjct: 688 LKHKVFVERSNLGLVQRRLRLKDF-RDAYPRFPPIQSIHVSQDERECTMDLSEFMNPSPY 746

Query: 384 TVVETMSLAKAAVLFRALGLRHLLVVPKTPGRFPIVGILTRHDL 253
           TV +  SL +   LFRALGLRHL+VV     R  +VG++TR DL
Sbjct: 747 TVPQEASLPRVFKLFRALGLRHLVVV---DNRNQVVGLVTRKDL 787

>CLCN7_RAT (P51799) Chloride channel protein 7 (ClC-7)|
          Length = 803

 Score = 57.4 bits (137), Expect = 3e-08
 Identities = 39/104 (37%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
 Frame = -3

Query: 555 MKEKV---KTSGSFVLRRFGAFDFAKPGSGKGMKIEDLDFTEEEMEMYVDLHPITNTSPY 385
           +K KV   +++   V RR    DF +    +   I+ +  +++E E  +DL    N SPY
Sbjct: 686 LKHKVFVERSNMGLVQRRLRLKDF-RDAYPRFPPIQSIHVSQDERECTMDLSEFMNPSPY 744

Query: 384 TVVETMSLAKAAVLFRALGLRHLLVVPKTPGRFPIVGILTRHDL 253
           TV +  SL +   LFRALGLRHL+VV        +VG++TR DL
Sbjct: 745 TVPQEASLPRVFKLFRALGLRHLVVV---DNHNQVVGLVTRKDL 785

>CLCN7_MOUSE (O70496) Chloride channel protein 7 (ClC-7)|
          Length = 803

 Score = 57.4 bits (137), Expect = 3e-08
 Identities = 39/104 (37%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
 Frame = -3

Query: 555 MKEKV---KTSGSFVLRRFGAFDFAKPGSGKGMKIEDLDFTEEEMEMYVDLHPITNTSPY 385
           +K KV   +++   V RR    DF +    +   I+ +  +++E E  +DL    N SPY
Sbjct: 686 LKHKVFVERSNMGLVQRRLRLKDF-RDAYPRFPPIQSIHVSQDERECTMDLSEFMNPSPY 744

Query: 384 TVVETMSLAKAAVLFRALGLRHLLVVPKTPGRFPIVGILTRHDL 253
           TV +  SL +   LFRALGLRHL+VV        +VG++TR DL
Sbjct: 745 TVPQEASLPRVFKLFRALGLRHLVVV---DNHNQVVGLVTRKDL 785

>CLCN6_MOUSE (O35454) Chloride channel protein 6 (ClC-6)|
          Length = 870

 Score = 55.1 bits (131), Expect = 1e-07
 Identities = 33/75 (44%), Positives = 42/75 (56%)
 Frame = -3

Query: 462  IEDLDFTEEEMEMYVDLHPITNTSPYTVVETMSLAKAAVLFRALGLRHLLVVPKTPGRFP 283
            I DLD T     M VD+ P  N SP+TV     +++   LFR +GLRHL VV        
Sbjct: 788  IHDLDLTLLNPRMIVDVTPYMNPSPFTVSPNTHVSQVFNLFRTMGLRHLPVVNAVG---E 844

Query: 282  IVGILTRHDLMPEHI 238
            IVGI+TRH+L  E +
Sbjct: 845  IVGIITRHNLTNEFL 859

>CLCN6_HUMAN (P51797) Chloride channel protein 6 (ClC-6)|
          Length = 869

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 33/75 (44%), Positives = 42/75 (56%)
 Frame = -3

Query: 462  IEDLDFTEEEMEMYVDLHPITNTSPYTVVETMSLAKAAVLFRALGLRHLLVVPKTPGRFP 283
            I DLD T     M VD+ P  N SP+TV     +++   LFR +GLRHL VV        
Sbjct: 787  IHDLDLTLLNPRMIVDVTPYMNPSPFTVSPNTHVSQVFNLFRTMGLRHLPVVNAVG---E 843

Query: 282  IVGILTRHDLMPEHI 238
            IVGI+TRH+L  E +
Sbjct: 844  IVGIITRHNLTYEFL 858

>CLCN6_RABIT (Q9TT16) Chloride channel protein 6 (ClC-6)|
          Length = 869

 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 33/75 (44%), Positives = 42/75 (56%)
 Frame = -3

Query: 462  IEDLDFTEEEMEMYVDLHPITNTSPYTVVETMSLAKAAVLFRALGLRHLLVVPKTPGRFP 283
            I DLD T     M VD+ P  N SP+TV     +++   LFR +GLRHL VV        
Sbjct: 787  IHDLDLTLLNPRMIVDVTPYMNPSPFTVSPNTHVSQVFNLFRTMGLRHLPVVNAVG---E 843

Query: 282  IVGILTRHDLMPEHI 238
            IVGI+TRH+L  E +
Sbjct: 844  IVGIVTRHNLTYEFL 858

>CLCN4_RAT (P51794) Chloride channel protein 4 (ClC-4)|
          Length = 747

 Score = 37.4 bits (85), Expect = 0.030
 Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
 Frame = -3

Query: 447 FTEEEMEMYVDL-HP-----ITNTSPYTVVETMSLAKAAVLFRALGLRHLLVVPKTPGRF 286
           FTEE  E+  +  HP     I N SP+TV +   +     +FR LGLR  LV     GR 
Sbjct: 663 FTEEPPELPANSPHPLKLRRILNLSPFTVTDHTPMETVVDIFRKLGLRQCLVT--RSGR- 719

Query: 285 PIVGILTRHDLM 250
            ++GI+T+ D++
Sbjct: 720 -LLGIITKKDVL 730

>CLCN4_HUMAN (P51793) Chloride channel protein 4 (ClC-4)|
          Length = 760

 Score = 37.4 bits (85), Expect = 0.030
 Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
 Frame = -3

Query: 447 FTEEEMEMYVDL-HP-----ITNTSPYTVVETMSLAKAAVLFRALGLRHLLVVPKTPGRF 286
           FTEE  E+  +  HP     I N SP+TV +   +     +FR LGLR  LV     GR 
Sbjct: 676 FTEEPPELPANSPHPLKLRRILNLSPFTVTDHTPMETVVDIFRKLGLRQCLVT--RSGR- 732

Query: 285 PIVGILTRHDLM 250
            ++GI+T+ D++
Sbjct: 733 -LLGIITKKDVL 743

>CLCN4_MOUSE (Q61418) Chloride channel protein 4 (ClC-4)|
          Length = 747

 Score = 37.0 bits (84), Expect = 0.039
 Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
 Frame = -3

Query: 447 FTEEEMEMYVDL-HP-----ITNTSPYTVVETMSLAKAAVLFRALGLRHLLVVPKTPGRF 286
           FTEE  E+  +  HP     I N SP+TV +   +     +FR LGLR  LV     GR 
Sbjct: 663 FTEEPPELPANSPHPLKLRRIFNLSPFTVTDHTPMETVVDIFRKLGLRQCLVT--RSGR- 719

Query: 285 PIVGILTRHDLM 250
            ++GI+T+ D++
Sbjct: 720 -LLGIITKKDVL 730

>Y868_METJA (Q58278) Hypothetical protein MJ0868|
          Length = 127

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 25/69 (36%), Positives = 33/69 (47%)
 Frame = -3

Query: 456 DLDFTEEEMEMYVDLHPITNTSPYTVVETMSLAKAAVLFRALGLRHLLVVPKTPGRFPIV 277
           DLD T EE         I  T+P TV     L KA  +    G+ HL V  K+P    IV
Sbjct: 62  DLDKTAEE---------IMTTNPITVSPEAPLEKAVEIMAEKGIHHLYV--KSPCEDKIV 110

Query: 276 GILTRHDLM 250
           G+L+  D++
Sbjct: 111 GVLSSKDII 119

>CLCN5_RAT (P51796) Chloride channel protein 5 (ClC-5)|
          Length = 746

 Score = 33.1 bits (74), Expect = 0.56
 Identities = 22/59 (37%), Positives = 34/59 (57%)
 Frame = -3

Query: 414 LHPITNTSPYTVVETMSLAKAAVLFRALGLRHLLVVPKTPGRFPIVGILTRHDLMPEHI 238
           L  I + SP+TV +   +     +FR LGLR  LV     GR  ++GI+T+ D++ +HI
Sbjct: 679 LRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTHN--GR--LLGIITKKDVL-KHI 732

>CLCN5_MOUSE (Q9WVD4) Chloride channel protein 5 (ClC-5)|
          Length = 746

 Score = 33.1 bits (74), Expect = 0.56
 Identities = 22/59 (37%), Positives = 34/59 (57%)
 Frame = -3

Query: 414 LHPITNTSPYTVVETMSLAKAAVLFRALGLRHLLVVPKTPGRFPIVGILTRHDLMPEHI 238
           L  I + SP+TV +   +     +FR LGLR  LV     GR  ++GI+T+ D++ +HI
Sbjct: 679 LRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTHN--GR--LLGIITKKDVL-KHI 732

>CLCN5_HUMAN (P51795) Chloride channel protein 5 (ClC-5)|
          Length = 746

 Score = 33.1 bits (74), Expect = 0.56
 Identities = 22/59 (37%), Positives = 34/59 (57%)
 Frame = -3

Query: 414 LHPITNTSPYTVVETMSLAKAAVLFRALGLRHLLVVPKTPGRFPIVGILTRHDLMPEHI 238
           L  I + SP+TV +   +     +FR LGLR  LV     GR  ++GI+T+ D++ +HI
Sbjct: 679 LRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTHN--GR--LLGIITKKDVL-KHI 732

>CLCN3_PONPY (Q5RDJ7) Chloride channel protein 3 (ClC-3)|
          Length = 801

 Score = 33.1 bits (74), Expect = 0.56
 Identities = 20/55 (36%), Positives = 31/55 (56%)
 Frame = -3

Query: 414 LHPITNTSPYTVVETMSLAKAAVLFRALGLRHLLVVPKTPGRFPIVGILTRHDLM 250
           L  I + SP+TV +   +     +FR LGLR  LV     GR  ++GI+T+ D++
Sbjct: 734 LRSILDMSPFTVTDHTPMEIVVDIFRKLGLRQCLVTHN--GR--LLGIITKKDIL 784

>CLCN3_RABIT (O18894) Chloride channel protein 3 (ClC-3)|
          Length = 760

 Score = 33.1 bits (74), Expect = 0.56
 Identities = 20/55 (36%), Positives = 31/55 (56%)
 Frame = -3

Query: 414 LHPITNTSPYTVVETMSLAKAAVLFRALGLRHLLVVPKTPGRFPIVGILTRHDLM 250
           L  I + SP+TV +   +     +FR LGLR  LV     GR  ++GI+T+ D++
Sbjct: 693 LRSILDMSPFTVTDHTPMEIVVDIFRKLGLRQCLVTHN--GR--LLGIITKKDIL 743

>CLCN3_MOUSE (P51791) Chloride channel protein 3 (ClC-3)|
          Length = 760

 Score = 33.1 bits (74), Expect = 0.56
 Identities = 20/55 (36%), Positives = 31/55 (56%)
 Frame = -3

Query: 414 LHPITNTSPYTVVETMSLAKAAVLFRALGLRHLLVVPKTPGRFPIVGILTRHDLM 250
           L  I + SP+TV +   +     +FR LGLR  LV     GR  ++GI+T+ D++
Sbjct: 693 LRSILDMSPFTVTDHTPMEIVVDIFRKLGLRQCLVTHN--GR--LLGIITKKDIL 743

>CLCN3_CAVPO (Q9R279) Chloride channel protein 3 (ClC-3)|
          Length = 760

 Score = 33.1 bits (74), Expect = 0.56
 Identities = 20/55 (36%), Positives = 31/55 (56%)
 Frame = -3

Query: 414 LHPITNTSPYTVVETMSLAKAAVLFRALGLRHLLVVPKTPGRFPIVGILTRHDLM 250
           L  I + SP+TV +   +     +FR LGLR  LV     GR  ++GI+T+ D++
Sbjct: 693 LRSILDMSPFTVTDHTPMEIVVDIFRKLGLRQCLVTHN--GR--LLGIITKKDIL 743

>CLCN3_HUMAN (P51790) Chloride channel protein 3 (ClC-3)|
          Length = 762

 Score = 33.1 bits (74), Expect = 0.56
 Identities = 20/55 (36%), Positives = 31/55 (56%)
 Frame = -3

Query: 414 LHPITNTSPYTVVETMSLAKAAVLFRALGLRHLLVVPKTPGRFPIVGILTRHDLM 250
           L  I + SP+TV +   +     +FR LGLR  LV     GR  ++GI+T+ D++
Sbjct: 695 LRSILDMSPFTVTDHTPMEIVVDIFRKLGLRQCLVTHN--GR--LLGIITKKDIL 745

>CLCN3_RAT (P51792) Chloride channel protein 3 (ClC-3)|
          Length = 760

 Score = 32.7 bits (73), Expect = 0.73
 Identities = 20/55 (36%), Positives = 31/55 (56%)
 Frame = -3

Query: 414 LHPITNTSPYTVVETMSLAKAAVLFRALGLRHLLVVPKTPGRFPIVGILTRHDLM 250
           L  I + SP+TV +   +     +FR LGLR  LV     GR  ++GI+T+ D++
Sbjct: 693 LRSILDMSPFTVTDHTPMEIVVDVFRKLGLRQCLVTHN--GR--LLGIITKKDIL 743

>ARGC_CORDI (Q6NHH0) N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)|
           (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase)
           (NAGSA dehydrogenase)
          Length = 347

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = -2

Query: 322 TPAGCAKDPREISYR-WDSHQARSHAGAYPWAVPQSP 215
           T   CA D R    + WD++    HAG++P+ +P+ P
Sbjct: 98  TVIDCAADFRLKDQKDWDAYYGGKHAGSWPYGIPEMP 134

>RS13_MYCGE (P47421) 30S ribosomal protein S13|
          Length = 124

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = -2

Query: 430 GDVRRSPS-NHKHFAVHGGRNNVACKGRSPVQGTRAKTPAGCAKDPRE 290
           GD+RR  + N KH    G    +  +   PV+G R +T A   K PR+
Sbjct: 67  GDLRREIALNIKHLTEIGSWKGIRHRKNLPVRGQRTRTNARTRKGPRK 114


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,853,629
Number of Sequences: 219361
Number of extensions: 2007228
Number of successful extensions: 4977
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 4874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4972
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4700377760
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)