ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd17a17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AY103782.1| Zea mays PCO080860 mRNA sequence 462 e-127
2gb|BT016666.1| Zea mays clone Contig499 mRNA sequence 454 e-124
3dbj|AK061892.1| Oryza sativa (japonica cultivar-group) cDNA clon... 434 e-118
4dbj|AK065295.1| Oryza sativa (japonica cultivar-group) cDNA clon... 434 e-118
5gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome... 402 e-109
6dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 402 e-109
7gb|BT009123.1| Triticum aestivum clone wl1n.pk0013.e12:fis, full... 317 2e-83
8gb|AY103707.1| Zea mays PCO072121 mRNA sequence 317 2e-83
9gb|BT016378.1| Zea mays clone Contig211 mRNA sequence 285 8e-74
10ref|NM_192395.1| Oryza sativa (japonica cultivar-group), predic... 242 1e-60
11dbj|AK072075.1| Oryza sativa (japonica cultivar-group) cDNA clon... 242 1e-60
12dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 216 6e-53
13dbj|AP003710.3| Oryza sativa (japonica cultivar-group) genomic D... 216 6e-53
14ref|NM_115723.2| Arabidopsis thaliana ketol-acid reductoisomeras... 133 7e-28
15gb|BT000822.1| Arabidopsis thaliana ketol-acid reductoisomerase ... 133 7e-28
16gb|BT000669.1| Arabidopsis thaliana clone RAFL07-09-M16 (R10765)... 133 7e-28
17gb|AY096556.1| Arabidopsis thaliana putative ketol-acid reductoi... 133 7e-28
18gb|AY065398.1| Arabidopsis thaliana putative ketol-acid reductoi... 133 7e-28
19emb|X68150.1|ATKARE A.thaliana mRNA for ketol-acid reductoisomer... 133 7e-28
20gb|AF329500.1| Arabidopsis thaliana putative ketol-acid reductoi... 133 7e-28
21gb|AY062094.1| Arabidopsis thaliana AT3g58610/F14P22_200 mRNA, c... 133 7e-28
22dbj|AK221938.1| Arabidopsis thaliana mRNA for ketol-acid reducto... 133 7e-28
23gb|AF324671.2|AF324671 Arabidopsis thaliana AT3g58610 (AT3g58610... 133 7e-28
24emb|BX823796.1|CNS0A4R1 Arabidopsis thaliana Full-length cDNA Co... 117 4e-23
25emb|Y17796.1|PSY17796 Pisum sativum mRNA for ketol-acid reductoi... 111 3e-21
26emb|X69880.1|ATAAI A.thaliana gene for acetohydroxy acid isomero... 109 1e-20
27emb|AL137082.1|ATF14P22 Arabidopsis thaliana DNA chromosome 3, B... 109 1e-20
28gb|AY702346.1| Phytophthora infestans ketol-acid reductoisomeras... 109 1e-20
29emb|X57073.1|SOAHRI S.oleracea AHRI mRNA for acetohydroxy acid r... 98 4e-17
30emb|AJ251333.1|PSA251333 Pisum sativum aair gene for acetohydrox... 96 1e-16
31gb|AC135231.23| Medicago truncatula clone mth2-28m10, complete s... 76 1e-10
32gb|DQ448854.1| Theobroma cacao putative ketol acid reductoisomer... 42 1.9
33gb|AC136921.8| Mus musculus chromosome 17, clone RP23-210D4, com... 42 1.9
34gb|AC129095.12| Mus musculus strain C57BL/6J clone rp23-360g16 m... 42 1.9
35gb|AC027251.6| Homo sapiens chromosome 8, clone RP11-14G5, compl... 42 1.9
36dbj|AK035823.1| Mus musculus 16 days neonate cerebellum cDNA, RI... 42 1.9
37gb|AC153999.7| Mus musculus 6 BAC RP24-395E8 (Roswell Park Cance... 42 1.9
38emb|BX119963.5| Zebrafish DNA sequence from clone DKEY-6A5 in li... 42 1.9
39gb|AC087901.20| Mus musculus strain C57BL/6J chromosome 17 clone... 42 1.9
40gb|AC154000.4| Mus musculus 6 BAC RP24-313C5 (Roswell Park Cance... 42 1.9
41ref|XM_428106.1| PREDICTED: Gallus gallus similar to hypothetica... 40 7.6
42emb|CR376778.9| Zebrafish DNA sequence from clone DKEYP-94F12 in... 40 7.6
43ref|XM_789042.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 7.6
44emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete ... 40 7.6
45gb|AY007310.1| Coturnix coturnix target of Jun 3 (TOJ3) mRNA, co... 40 7.6
46gb|AC138666.6| Mus musculus chromosome 5, clone RP24-140D11, com... 40 7.6
47emb|CR762419.14| Zebrafish DNA sequence from clone CH211-247A18 ... 40 7.6
48gb|AC123917.25| Mus musculus chromosome 15, clone RP23-281P5, co... 40 7.6

>gb|AY103782.1| Zea mays PCO080860 mRNA sequence
          Length = 2117

 Score =  462 bits (233), Expect = e-127
 Identities = 357/399 (89%)
 Strand = Plus / Minus

                                                                        
Query: 165  aatctaggcagactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagat 224
            |||||||| |||||||||||||||||| ||||| ||||| || | ||| | ||| |||||
Sbjct: 1872 aatctaggaagactgccggagctccgggcgcacaaagtcggcgttggcaggcacagagat 1813

                                                                        
Query: 225  gtcgacggtgggcctcagctcggcgcanacctcgatggcgccgtggacggggtccgacat 284
            ||||||||||||||||||||||||||| ||||| ||||| || ||||| |||||||||| 
Sbjct: 1812 gtcgacggtgggcctcagctcggcgcagacctcaatggcaccatggacagggtccgacaa 1753

                                                                        
Query: 285  gaagttgctgatgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctg 344
            ||||||||||||||||||||||||||| || || ||||||||||||| |||||| |||||
Sbjct: 1752 gaagttgctgatgaggtcctggttgatcggggcgtccttgtccaccgccacaaaggcctg 1693

                                                                        
Query: 345  ctgggtcangatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgt 404
            ||| |||| ||||||||||||||| |||||||||||||| || ||||| || ||||| ||
Sbjct: 1692 ctgcgtcaggatgtagtcgaagcgaggcgcccacttcctggatcccaggcgagccgttgt 1633

                                                                        
Query: 405  cgagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtc 464
             ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 1632 ggagcagttgtccaccatgaaggcgaccccacgggcgtgcatgaacgggttcagcgagtc 1573

                                                                        
Query: 465  cactgactcgatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcag 524
            ||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1572 caccgactcaatcacgctctcgttgatgatctcagagtaggagtgccccttcttcctcag 1513

                                                   
Query: 525  cacctcgatctgggccatcataagtgcaacgtaaactcc 563
             | ||| ||||| |||||||| || |||| ||| |||||
Sbjct: 1512 gatctcaatctgagccatcatcagggcaatgtacactcc 1474



to top

>gb|BT016666.1| Zea mays clone Contig499 mRNA sequence
          Length = 1992

 Score =  454 bits (229), Expect = e-124
 Identities = 356/399 (89%)
 Strand = Plus / Minus

                                                                        
Query: 165  aatctaggcagactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagat 224
            |||||||| |||||||||||||||||| ||||| ||||| || | ||| | ||| |||||
Sbjct: 1780 aatctaggaagactgccggagctccgggcgcacaaagtcggcgttggcaggcacagagat 1721

                                                                        
Query: 225  gtcgacggtgggcctcagctcggcgcanacctcgatggcgccgtggacggggtccgacat 284
            ||||||||||||||||||||||||||| ||||| ||||| || ||||| |||||||||| 
Sbjct: 1720 gtcgacggtgggcctcagctcggcgcagacctcaatggcaccatggacagggtccgacaa 1661

                                                                        
Query: 285  gaagttgctgatgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctg 344
            ||||||||||||||||||||||||||| || || ||||||||||||| ||| || |||||
Sbjct: 1660 gaagttgctgatgaggtcctggttgatcggggcgtccttgtccaccgccacgaaggcctg 1601

                                                                        
Query: 345  ctgggtcangatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgt 404
            ||| |||| ||||||||||||||| |||||||||||||| || ||||| || ||||| ||
Sbjct: 1600 ctgcgtcaggatgtagtcgaagcgaggcgcccacttcctggatcccaggcgagccgttgt 1541

                                                                        
Query: 405  cgagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtc 464
             ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 1540 ggagcagttgtccaccatgaaggcgaccccacgggcgtgcatgaacgggttcagcgagtc 1481

                                                                        
Query: 465  cactgactcgatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcag 524
            ||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1480 caccgactcaatcacgctctcgttgatgatctcagagtaggagtgccccttcttcctcag 1421

                                                   
Query: 525  cacctcgatctgggccatcataagtgcaacgtaaactcc 563
             | ||| ||||| |||||||| || |||| ||| |||||
Sbjct: 1420 gatctcaatctgagccatcatcagggcaatgtacactcc 1382



to top

>dbj|AK061892.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-G05, full
           insert sequence
          Length = 1153

 Score =  434 bits (219), Expect = e-118
 Identities = 346/389 (88%)
 Strand = Plus / Minus

                                                                       
Query: 175 gactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggtg 234
           |||||||||||||| || |||||||| || || | ||| | ||| |||||||||||||||
Sbjct: 983 gactgccggagctctgggcgcacgaaatcggcgttggcaggcacggagatgtcgacggtg 924

                                                                       
Query: 235 ggcctcagctcggcgcanacctcgatggcgccgtggacggggtccgacatgaagttgctg 294
           |||| |||||| ||||| |||||||| ||||| ||||||||||| |||||||||||||||
Sbjct: 923 ggccgcagctcagcgcacacctcgattgcgccatggacggggtcggacatgaagttgctg 864

                                                                       
Query: 295 atgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcang 354
           |||||||||||||||||||| |||||||||||||| ||||| || || |||||||||| |
Sbjct: 863 atgaggtcctggttgatgggagcatccttgtccactgtcacgaatgcttgctgggtcagg 804

                                                                       
Query: 355 atgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtcgagcagttg 414
           |||||||||||||| |||||||| ||||| || ||||| || |||||||| |||||||||
Sbjct: 803 atgtagtcgaagcgtggcgcccatttccttgatcccagacgagccgtcgttgagcagttg 744

                                                                       
Query: 415 tccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtccactgactcg 474
           || |||||||||||||| ||||| || |||||||| |||||||| |||||||| ||||||
Sbjct: 743 tcaaccatgaaggccactccacgagcatgcatgaaggggttcagtgagtccacggactcg 684

                                                                       
Query: 475 atcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagcacctcgatc 534
           || |||||||||||||||||||| |||||||||||||||||||| || || |||||||||
Sbjct: 683 atgacgctctcgttgatgatctctgagtaggagtgacccttctttctaaggacctcgatc 624

                                        
Query: 535 tgggccatcataagtgcaacgtaaactcc 563
           || |||||||| ||||||||||| |||||
Sbjct: 623 tgagccatcatcagtgcaacgtagactcc 595



to top

>dbj|AK065295.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002N13, full
            insert sequence
          Length = 1983

 Score =  434 bits (219), Expect = e-118
 Identities = 346/389 (88%)
 Strand = Plus / Minus

                                                                        
Query: 175  gactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggtg 234
            |||||||||||||| || |||||||| || || | ||| | ||| |||||||||||||||
Sbjct: 1795 gactgccggagctctgggcgcacgaaatcggcgttggcaggcacggagatgtcgacggtg 1736

                                                                        
Query: 235  ggcctcagctcggcgcanacctcgatggcgccgtggacggggtccgacatgaagttgctg 294
            |||| |||||| ||||| |||||||| ||||| ||||||||||| |||||||||||||||
Sbjct: 1735 ggccgcagctcagcgcacacctcgattgcgccatggacggggtcggacatgaagttgctg 1676

                                                                        
Query: 295  atgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcang 354
            |||||||||||||||||||| |||||||||||||| ||||| || || |||||||||| |
Sbjct: 1675 atgaggtcctggttgatgggagcatccttgtccactgtcacgaatgcttgctgggtcagg 1616

                                                                        
Query: 355  atgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtcgagcagttg 414
            |||||||||||||| |||||||| ||||| || ||||| || |||||||| |||||||||
Sbjct: 1615 atgtagtcgaagcgtggcgcccatttccttgatcccagacgagccgtcgttgagcagttg 1556

                                                                        
Query: 415  tccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtccactgactcg 474
            || |||||||||||||| ||||| || |||||||| |||||||| |||||||| ||||||
Sbjct: 1555 tcaaccatgaaggccactccacgagcatgcatgaaggggttcagtgagtccacggactcg 1496

                                                                        
Query: 475  atcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagcacctcgatc 534
            || |||||||||||||||||||| |||||||||||||||||||| || || |||||||||
Sbjct: 1495 atgacgctctcgttgatgatctctgagtaggagtgacccttctttctaaggacctcgatc 1436

                                         
Query: 535  tgggccatcataagtgcaacgtaaactcc 563
            || |||||||| ||||||||||| |||||
Sbjct: 1435 tgagccatcatcagtgcaacgtagactcc 1407



to top

>gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1735_C10,
              complete sequence
          Length = 187034

 Score =  402 bits (203), Expect = e-109
 Identities = 321/361 (88%)
 Strand = Plus / Plus

                                                                          
Query: 175    gactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggtg 234
              |||||||||||||| || |||||||| || || | ||| | ||| |||||||||||||||
Sbjct: 143341 gactgccggagctctgggcgcacgaaatcggcgttggcaggcacggagatgtcgacggtg 143400

                                                                          
Query: 235    ggcctcagctcggcgcanacctcgatggcgccgtggacggggtccgacatgaagttgctg 294
              |||| |||||| ||||| |||||||| ||||| ||||||||||| |||||||||||||||
Sbjct: 143401 ggccgcagctcagcgcacacctcgattgcgccatggacggggtcggacatgaagttgctg 143460

                                                                          
Query: 295    atgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcang 354
              |||||||||||||||||||| |||||||||||||| ||||| || || |||||||||| |
Sbjct: 143461 atgaggtcctggttgatgggagcatccttgtccactgtcacgaatgcttgctgggtcagg 143520

                                                                          
Query: 355    atgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtcgagcagttg 414
              |||||||||||||| |||||||| ||||| || ||||| || |||||||| |||||||||
Sbjct: 143521 atgtagtcgaagcgtggcgcccatttccttgatcccagacgagccgtcgttgagcagttg 143580

                                                                          
Query: 415    tccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtccactgactcg 474
              || |||||||||||||| ||||| || |||||||| |||||||| |||||||| ||||||
Sbjct: 143581 tcaaccatgaaggccactccacgagcatgcatgaaggggttcagtgagtccacggactcg 143640

                                                                          
Query: 475    atcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagcacctcgatc 534
              || |||||||||||||||||||| |||||||||||||||||||| || || |||||||||
Sbjct: 143641 atgacgctctcgttgatgatctctgagtaggagtgacccttctttctaaggacctcgatc 143700

               
Query: 535    t 535
              |
Sbjct: 143701 t 143701



to top

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  402 bits (203), Expect = e-109
 Identities = 321/361 (88%)
 Strand = Plus / Plus

                                                                            
Query: 175      gactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggtg 234
                |||||||||||||| || |||||||| || || | ||| | ||| |||||||||||||||
Sbjct: 28359099 gactgccggagctctgggcgcacgaaatcggcgttggcaggcacggagatgtcgacggtg 28359158

                                                                            
Query: 235      ggcctcagctcggcgcanacctcgatggcgccgtggacggggtccgacatgaagttgctg 294
                |||| |||||| ||||| |||||||| ||||| ||||||||||| |||||||||||||||
Sbjct: 28359159 ggccgcagctcagcgcacacctcgattgcgccatggacggggtcggacatgaagttgctg 28359218

                                                                            
Query: 295      atgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcang 354
                |||||||||||||||||||| |||||||||||||| ||||| || || |||||||||| |
Sbjct: 28359219 atgaggtcctggttgatgggagcatccttgtccactgtcacgaatgcttgctgggtcagg 28359278

                                                                            
Query: 355      atgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtcgagcagttg 414
                |||||||||||||| |||||||| ||||| || ||||| || |||||||| |||||||||
Sbjct: 28359279 atgtagtcgaagcgtggcgcccatttccttgatcccagacgagccgtcgttgagcagttg 28359338

                                                                            
Query: 415      tccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtccactgactcg 474
                || |||||||||||||| ||||| || |||||||| |||||||| |||||||| ||||||
Sbjct: 28359339 tcaaccatgaaggccactccacgagcatgcatgaaggggttcagtgagtccacggactcg 28359398

                                                                            
Query: 475      atcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagcacctcgatc 534
                || |||||||||||||||||||| |||||||||||||||||||| || || |||||||||
Sbjct: 28359399 atgacgctctcgttgatgatctctgagtaggagtgacccttctttctaaggacctcgatc 28359458

                 
Query: 535      t 535
                |
Sbjct: 28359459 t 28359459



to top

>gb|BT009123.1| Triticum aestivum clone wl1n.pk0013.e12:fis, full insert mRNA
            sequence
          Length = 1957

 Score =  317 bits (160), Expect = 2e-83
 Identities = 332/390 (85%)
 Strand = Plus / Minus

                                                                        
Query: 174  agactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggt 233
            |||||| || ||||| ||||||||||| |||||||| || ||||| |||||||| || ||
Sbjct: 1766 agactgtcgaagctctggacgcacgaaatcagcatcagcggtcactgagatgtcaacagt 1707

                                                                        
Query: 234  gggcctcagctcggcgcanacctcgatggcgccgtggacggggtccgacatgaagttgct 293
            |||||||||||  ||||| || |||||||| |||||||| ||||| ||||||||||||||
Sbjct: 1706 gggcctcagctgagcgcagacttcgatggcaccgtggacagggtcagacatgaagttgct 1647

                                                                        
Query: 294  gatgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcan 353
            ||||||||| |||||||| || || | |||||| || |||||||||||||| ||||||| 
Sbjct: 1646 gatgaggtcttggttgatcggtgctttcttgtcaacagtcacaaacgcctgttgggtcaa 1587

                                                                        
Query: 354  gatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtcgagcagtt 413
            |||||| |||||||| || ||||||||||| || ||||  || || || || ||||||||
Sbjct: 1586 gatgtaatcgaagcgtggtgcccacttcctagatcccaaacgagcagttgtggagcagtt 1527

                                                                        
Query: 414  gtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtccactgactc 473
             || |||||||||||||| || || || |||||||||||||||| ||||||||| |||||
Sbjct: 1526 atcgaccatgaaggccacaccgcgagcatgcatgaacgggttcaacgagtccacggactc 1467

                                                                        
Query: 474  gatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagcacctcgat 533
            ||||| |||||| || || ||||| ||||| ||||| ||||||||||| || ||||| ||
Sbjct: 1466 gatcaggctctcattaattatctctgagtaagagtggcccttcttcctaaggacctcaat 1407

                                          
Query: 534  ctgggccatcataagtgcaacgtaaactcc 563
            ||| |||||||| |||||||| || |||||
Sbjct: 1406 ctgagccatcattagtgcaacatacactcc 1377



to top

>gb|AY103707.1| Zea mays PCO072121 mRNA sequence
          Length = 1985

 Score =  317 bits (160), Expect = 2e-83
 Identities = 332/390 (85%)
 Strand = Plus / Minus

                                                                        
Query: 174  agactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggt 233
            |||||| || ||||| ||||||||||| |||||||| || ||||| |||||||| || ||
Sbjct: 1777 agactgtcgaagctctggacgcacgaaatcagcatcagcggtcactgagatgtcaacagt 1718

                                                                        
Query: 234  gggcctcagctcggcgcanacctcgatggcgccgtggacggggtccgacatgaagttgct 293
            |||||||||||  ||||| || |||||||| |||||||| ||||| ||||||||||||||
Sbjct: 1717 gggcctcagctgagcgcagacttcgatggcaccgtggacagggtcagacatgaagttgct 1658

                                                                        
Query: 294  gatgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcan 353
            ||||||||| |||||||| || || | |||||| || |||||||||||||| ||||||| 
Sbjct: 1657 gatgaggtcttggttgatcggtgctttcttgtcaacagtcacaaacgcctgttgggtcaa 1598

                                                                        
Query: 354  gatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtcgagcagtt 413
            |||||| |||||||| || ||||||||||| || ||||  || || || || ||||||||
Sbjct: 1597 gatgtaatcgaagcgtggtgcccacttcctagatcccaaacgagcagttgtggagcagtt 1538

                                                                        
Query: 414  gtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtccactgactc 473
             || |||||||||||||| || || || |||||||||||||||| ||||||||| |||||
Sbjct: 1537 atcgaccatgaaggccacaccgcgagcatgcatgaacgggttcaacgagtccacggactc 1478

                                                                        
Query: 474  gatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagcacctcgat 533
            ||||| |||||| || || ||||| ||||| ||||| ||||||||||| || ||||| ||
Sbjct: 1477 gatcaggctctcattaattatctctgagtaagagtggcccttcttcctaaggacctcaat 1418

                                          
Query: 534  ctgggccatcataagtgcaacgtaaactcc 563
            ||| |||||||| |||||||| || |||||
Sbjct: 1417 ctgagccatcattagtgcaacatacactcc 1388



to top

>gb|BT016378.1| Zea mays clone Contig211 mRNA sequence
          Length = 1029

 Score =  285 bits (144), Expect = 8e-74
 Identities = 328/390 (84%)
 Strand = Plus / Minus

                                                                       
Query: 174 agactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggt 233
           |||||| || ||||| || |||||||| |||||||  || ||||| |||||||| || ||
Sbjct: 817 agactgtcgaagctctgggcgcacgaaatcagcatgagcggtcactgagatgtcaacagt 758

                                                                       
Query: 234 gggcctcagctcggcgcanacctcgatggcgccgtggacggggtccgacatgaagttgct 293
           |||||||||||  ||||| || |||||||| |||||||| ||||| ||||||||||||||
Sbjct: 757 gggcctcagctgagcgcagacttcgatggcaccgtggacagggtcagacatgaagttgct 698

                                                                       
Query: 294 gatgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcan 353
           ||||||||| |||||||| || || | |||||| || |||||||||||||| ||||||| 
Sbjct: 697 gatgaggtcttggttgatcggtgctttcttgtcaacagtcacaaacgcctgttgggtcaa 638

                                                                       
Query: 354 gatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtcgagcagtt 413
           |||||| |||||||| || ||||| ||||| || ||||  || || || || ||||||||
Sbjct: 637 gatgtaatcgaagcgtggtgcccatttcctagatcccaaacgagcagttgtggagcagtt 578

                                                                       
Query: 414 gtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtccactgactc 473
            || |||||||||||||| || || || |||||||||||||||| ||||||||| |||||
Sbjct: 577 atcgaccatgaaggccacaccgcgagcatgcatgaacgggttcaacgagtccacggactc 518

                                                                       
Query: 474 gatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagcacctcgat 533
           ||||| | |||| || || ||||| ||||| ||||| ||||||||||| || ||||| ||
Sbjct: 517 gatcagggtctcattaattatctctgagtaagagtggcccttcttcctaaggacctcaat 458

                                         
Query: 534 ctgggccatcataagtgcaacgtaaactcc 563
           ||| |||||||| |||||||| || |||||
Sbjct: 457 ctgagccatcattagtgcaacatacactcc 428



to top

>ref|NM_192395.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1746

 Score =  242 bits (122), Expect = 1e-60
 Identities = 315/380 (82%)
 Strand = Plus / Minus

                                                                        
Query: 184  agctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagc 243
            ||||| |||||||| ||||| ||||| || | ||| || ||||| ||||||||||||| |
Sbjct: 1730 agctctggacgcacaaagtctgcatcagcaggcactgaaatgtcaacggtgggcctcaac 1671

                                                                        
Query: 244  tcggcgcanacctcgatggcgccgtggacggggtccgacatgaagttgctgatgaggtcc 303
            |  || || || || ||||| |  |||||||| || || | ||| |||||||||||||| 
Sbjct: 1670 tgagcacagacttcaatggcactatggacgggatcggagaagaaattgctgatgaggtct 1611

                                                                        
Query: 304  tggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcangatgtagtcg 363
            || || |  || |||| |||||| || |||||||| || || ||||||| ||||||||||
Sbjct: 1610 tgattaactggagcattcttgtcaacagtcacaaaagcttgttgggtcaagatgtagtcg 1551

                                                                        
Query: 364  aagcggggcgcccacttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatg 423
            ||||| |||||||| ||||| || |||| |||||| || || |||||||| || ||||||
Sbjct: 1550 aagcgtggcgcccatttccttgatcccaaccgggctgttgtggagcagttatcaaccatg 1491

                                                                        
Query: 424  aaggccaccccacgcgcgtgcatgaacgggttcagcgagtccactgactcgatcacgctc 483
            |||||||||||||| ||||||||||| |||||||| || ||||| ||||||||||  |||
Sbjct: 1490 aaggccaccccacgagcgtgcatgaatgggttcagggaatccacagactcgatcaaactc 1431

                                                                        
Query: 484  tcgttgatgatctcagagtaggagtgacccttcttcctcagcacctcgatctgggccatc 543
            |||||||||||||| ||||| ||||| |||||||| || || || || ||||| ||||||
Sbjct: 1430 tcgttgatgatctccgagtaagagtggcccttctttctaaggacttcaatctgtgccatc 1371

                                
Query: 544  ataagtgcaacgtaaactcc 563
            ||||||||||| || |||||
Sbjct: 1370 ataagtgcaacatacactcc 1351



to top

>dbj|AK072075.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013115K02, full
            insert sequence
          Length = 1917

 Score =  242 bits (122), Expect = 1e-60
 Identities = 315/380 (82%)
 Strand = Plus / Minus

                                                                        
Query: 184  agctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagc 243
            ||||| |||||||| ||||| ||||| || | ||| || ||||| ||||||||||||| |
Sbjct: 1681 agctctggacgcacaaagtctgcatcagcaggcactgaaatgtcaacggtgggcctcaac 1622

                                                                        
Query: 244  tcggcgcanacctcgatggcgccgtggacggggtccgacatgaagttgctgatgaggtcc 303
            |  || || || || ||||| |  |||||||| || || | ||| |||||||||||||| 
Sbjct: 1621 tgagcacagacttcaatggcactatggacgggatcggagaagaaattgctgatgaggtct 1562

                                                                        
Query: 304  tggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcangatgtagtcg 363
            || || |  || |||| |||||| || |||||||| || || ||||||| ||||||||||
Sbjct: 1561 tgattaactggagcattcttgtcaacagtcacaaaagcttgttgggtcaagatgtagtcg 1502

                                                                        
Query: 364  aagcggggcgcccacttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatg 423
            ||||| |||||||| ||||| || |||| |||||| || || |||||||| || ||||||
Sbjct: 1501 aagcgtggcgcccatttccttgatcccaaccgggctgttgtggagcagttatcaaccatg 1442

                                                                        
Query: 424  aaggccaccccacgcgcgtgcatgaacgggttcagcgagtccactgactcgatcacgctc 483
            |||||||||||||| ||||||||||| |||||||| || ||||| ||||||||||  |||
Sbjct: 1441 aaggccaccccacgagcgtgcatgaatgggttcagggaatccacagactcgatcaaactc 1382

                                                                        
Query: 484  tcgttgatgatctcagagtaggagtgacccttcttcctcagcacctcgatctgggccatc 543
            |||||||||||||| ||||| ||||| |||||||| || || || || ||||| ||||||
Sbjct: 1381 tcgttgatgatctccgagtaagagtggcccttctttctaaggacttcaatctgtgccatc 1322

                                
Query: 544  ataagtgcaacgtaaactcc 563
            ||||||||||| || |||||
Sbjct: 1321 ataagtgcaacatacactcc 1302



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  216 bits (109), Expect = 6e-53
 Identities = 278/335 (82%)
 Strand = Plus / Minus

                                                                            
Query: 184      agctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagc 243
                ||||| |||||||| ||||| ||||| || | ||| || ||||| ||||||||||||| |
Sbjct: 26389122 agctctggacgcacaaagtctgcatcagcaggcactgaaatgtcaacggtgggcctcaac 26389063

                                                                            
Query: 244      tcggcgcanacctcgatggcgccgtggacggggtccgacatgaagttgctgatgaggtcc 303
                |  || || || || ||||| |  |||||||| || || | ||| |||||||||||||| 
Sbjct: 26389062 tgagcacagacttcaatggcactatggacgggatcggagaagaaattgctgatgaggtct 26389003

                                                                            
Query: 304      tggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcangatgtagtcg 363
                || || |  || |||| |||||| || |||||||| || || ||||||| ||||||||||
Sbjct: 26389002 tgattaactggagcattcttgtcaacagtcacaaaagcttgttgggtcaagatgtagtcg 26388943

                                                                            
Query: 364      aagcggggcgcccacttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatg 423
                ||||| |||||||| ||||| || |||| |||||| || || |||||||| || ||||||
Sbjct: 26388942 aagcgtggcgcccatttccttgatcccaaccgggctgttgtggagcagttatcaaccatg 26388883

                                                                            
Query: 424      aaggccaccccacgcgcgtgcatgaacgggttcagcgagtccactgactcgatcacgctc 483
                |||||||||||||| ||||||||||| |||||||| || ||||| ||||||||||  |||
Sbjct: 26388882 aaggccaccccacgagcgtgcatgaatgggttcagggaatccacagactcgatcaaactc 26388823

                                                   
Query: 484      tcgttgatgatctcagagtaggagtgacccttctt 518
                |||||||||||||| ||||| ||||| ||||||||
Sbjct: 26388822 tcgttgatgatctccgagtaagagtggcccttctt 26388788



to top

>dbj|AP003710.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0032K15
          Length = 126195

 Score =  216 bits (109), Expect = 6e-53
 Identities = 278/335 (82%)
 Strand = Plus / Minus

                                                                         
Query: 184   agctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagc 243
             ||||| |||||||| ||||| ||||| || | ||| || ||||| ||||||||||||| |
Sbjct: 62987 agctctggacgcacaaagtctgcatcagcaggcactgaaatgtcaacggtgggcctcaac 62928

                                                                         
Query: 244   tcggcgcanacctcgatggcgccgtggacggggtccgacatgaagttgctgatgaggtcc 303
             |  || || || || ||||| |  |||||||| || || | ||| |||||||||||||| 
Sbjct: 62927 tgagcacagacttcaatggcactatggacgggatcggagaagaaattgctgatgaggtct 62868

                                                                         
Query: 304   tggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcangatgtagtcg 363
             || || |  || |||| |||||| || |||||||| || || ||||||| ||||||||||
Sbjct: 62867 tgattaactggagcattcttgtcaacagtcacaaaagcttgttgggtcaagatgtagtcg 62808

                                                                         
Query: 364   aagcggggcgcccacttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatg 423
             ||||| |||||||| ||||| || |||| |||||| || || |||||||| || ||||||
Sbjct: 62807 aagcgtggcgcccatttccttgatcccaaccgggctgttgtggagcagttatcaaccatg 62748

                                                                         
Query: 424   aaggccaccccacgcgcgtgcatgaacgggttcagcgagtccactgactcgatcacgctc 483
             |||||||||||||| ||||||||||| |||||||| || ||||| ||||||||||  |||
Sbjct: 62747 aaggccaccccacgagcgtgcatgaatgggttcagggaatccacagactcgatcaaactc 62688

                                                
Query: 484   tcgttgatgatctcagagtaggagtgacccttctt 518
             |||||||||||||| ||||| ||||| ||||||||
Sbjct: 62687 tcgttgatgatctccgagtaagagtggcccttctt 62653



to top

>ref|NM_115723.2| Arabidopsis thaliana ketol-acid reductoisomerase AT3G58610 mRNA,
            complete cds
          Length = 2087

 Score =  133 bits (67), Expect = 7e-28
 Identities = 180/218 (82%)
 Strand = Plus / Minus

                                                                        
Query: 346  tgggtcangatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 405
            ||||||| ||||||||| || || |||||||| |||||||| ||||  |  || || || 
Sbjct: 1704 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 1645

                                                                        
Query: 406  gagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtcc 465
            ||||||||||| |||||||||| ||| || |  |||||||| || ||||| || ||||||
Sbjct: 1644 gagcagttgtcaaccatgaaggacactcccctggcgtgcataaatgggtttagagagtcc 1585

                                                                        
Query: 466  actgactcgatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagc 525
            || || || ||||| |||||||||||||| || ||||| |||||||| ||||||||||  
Sbjct: 1584 acggattcaatcacactctcgttgatgatttctgagtaagagtgacctttcttcctcaag 1525

                                                  
Query: 526  acctcgatctgggccatcataagtgcaacgtaaactcc 563
            | ||| ||||| |||||||||||||| || ||||||||
Sbjct: 1524 atctcaatctgagccatcataagtgctacataaactcc 1487



to top

>gb|BT000822.1| Arabidopsis thaliana ketol-acid reductoisomerase
            (At3g58610/F14P22_200) mRNA, complete cds
          Length = 1776

 Score =  133 bits (67), Expect = 7e-28
 Identities = 180/218 (82%)
 Strand = Plus / Minus

                                                                        
Query: 346  tgggtcangatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 405
            ||||||| ||||||||| || || |||||||| |||||||| ||||  |  || || || 
Sbjct: 1595 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 1536

                                                                        
Query: 406  gagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtcc 465
            ||||||||||| |||||||||| ||| || |  |||||||| || ||||| || ||||||
Sbjct: 1535 gagcagttgtcaaccatgaaggacactcccctggcgtgcataaatgggtttagagagtcc 1476

                                                                        
Query: 466  actgactcgatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagc 525
            || || || ||||| |||||||||||||| || ||||| |||||||| ||||||||||  
Sbjct: 1475 acggattcaatcacactctcgttgatgatttctgagtaagagtgacctttcttcctcaag 1416

                                                  
Query: 526  acctcgatctgggccatcataagtgcaacgtaaactcc 563
            | ||| ||||| |||||||||||||| || ||||||||
Sbjct: 1415 atctcaatctgagccatcataagtgctacataaactcc 1378



to top

>gb|BT000669.1| Arabidopsis thaliana clone RAFL07-09-M16 (R10765) putative ketol-acid
            reductoisomerase (At3g58610) mRNA, complete cds
          Length = 2028

 Score =  133 bits (67), Expect = 7e-28
 Identities = 180/218 (82%)
 Strand = Plus / Minus

                                                                        
Query: 346  tgggtcangatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 405
            ||||||| ||||||||| || || |||||||| |||||||| ||||  |  || || || 
Sbjct: 1645 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 1586

                                                                        
Query: 406  gagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtcc 465
            ||||||||||| |||||||||| ||| || |  |||||||| || ||||| || ||||||
Sbjct: 1585 gagcagttgtcaaccatgaaggacactcccctggcgtgcataaatgggtttagagagtcc 1526

                                                                        
Query: 466  actgactcgatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagc 525
            || || || ||||| |||||||||||||| || ||||| |||||||| ||||||||||  
Sbjct: 1525 acggattcaatcacactctcgttgatgatttctgagtaagagtgacctttcttcctcaag 1466

                                                  
Query: 526  acctcgatctgggccatcataagtgcaacgtaaactcc 563
            | ||| ||||| |||||||||||||| || ||||||||
Sbjct: 1465 atctcaatctgagccatcataagtgctacataaactcc 1428



to top

>gb|AY096556.1| Arabidopsis thaliana putative ketol-acid reductoisomerase (At3g58610)
            mRNA, complete cds
          Length = 1807

 Score =  133 bits (67), Expect = 7e-28
 Identities = 180/218 (82%)
 Strand = Plus / Minus

                                                                        
Query: 346  tgggtcangatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 405
            ||||||| ||||||||| || || |||||||| |||||||| ||||  |  || || || 
Sbjct: 1595 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 1536

                                                                        
Query: 406  gagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtcc 465
            ||||||||||| |||||||||| ||| || |  |||||||| || ||||| || ||||||
Sbjct: 1535 gagcagttgtcaaccatgaaggacactcccctggcgtgcataaatgggtttagagagtcc 1476

                                                                        
Query: 466  actgactcgatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagc 525
            || || || ||||| |||||||||||||| || ||||| |||||||| ||||||||||  
Sbjct: 1475 acggattcaatcacactctcgttgatgatttctgagtaagagtgacctttcttcctcaag 1416

                                                  
Query: 526  acctcgatctgggccatcataagtgcaacgtaaactcc 563
            | ||| ||||| |||||||||||||| || ||||||||
Sbjct: 1415 atctcaatctgagccatcataagtgctacataaactcc 1378



to top

>gb|AY065398.1| Arabidopsis thaliana putative ketol-acid reductoisomerase (At3g58610)
            mRNA, complete cds
          Length = 2058

 Score =  133 bits (67), Expect = 7e-28
 Identities = 180/218 (82%)
 Strand = Plus / Minus

                                                                        
Query: 346  tgggtcangatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 405
            ||||||| ||||||||| || || |||||||| |||||||| ||||  |  || || || 
Sbjct: 1704 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 1645

                                                                        
Query: 406  gagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtcc 465
            ||||||||||| |||||||||| ||| || |  |||||||| || ||||| || ||||||
Sbjct: 1644 gagcagttgtcaaccatgaaggacactcccctggcgtgcataaatgggtttagagagtcc 1585

                                                                        
Query: 466  actgactcgatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagc 525
            || || || ||||| |||||||||||||| || ||||| |||||||| ||||||||||  
Sbjct: 1584 acggattcaatcacactctcgttgatgatttctgagtaagagtgacctttcttcctcaag 1525

                                                  
Query: 526  acctcgatctgggccatcataagtgcaacgtaaactcc 563
            | ||| ||||| |||||||||||||| || ||||||||
Sbjct: 1524 atctcaatctgagccatcataagtgctacataaactcc 1487



to top

>emb|X68150.1|ATKARE A.thaliana mRNA for ketol-acid reductoisomerase subunit
          Length = 1966

 Score =  133 bits (67), Expect = 7e-28
 Identities = 180/218 (82%)
 Strand = Plus / Minus

                                                                        
Query: 346  tgggtcangatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 405
            ||||||| ||||||||| || || |||||||| |||||||| ||||  |  || || || 
Sbjct: 1619 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 1560

                                                                        
Query: 406  gagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtcc 465
            ||||||||||| |||||||||| ||| || |  |||||||| || ||||| || ||||||
Sbjct: 1559 gagcagttgtcaaccatgaaggacactcccctggcgtgcataaatgggtttagagagtcc 1500

                                                                        
Query: 466  actgactcgatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagc 525
            || || || ||||| |||||||||||||| || ||||| |||||||| ||||||||||  
Sbjct: 1499 acggattcaatcacactctcgttgatgatttctgagtaagagtgacctttcttcctcaag 1440

                                                  
Query: 526  acctcgatctgggccatcataagtgcaacgtaaactcc 563
            | ||| ||||| |||||||||||||| || ||||||||
Sbjct: 1439 atctcaatctgagccatcataagtgctacataaactcc 1402



to top

>gb|AF329500.1| Arabidopsis thaliana putative ketol-acid reductoisomerase (At3g58610)
            mRNA, complete cds
          Length = 1996

 Score =  133 bits (67), Expect = 7e-28
 Identities = 180/218 (82%)
 Strand = Plus / Minus

                                                                        
Query: 346  tgggtcangatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 405
            ||||||| ||||||||| || || |||||||| |||||||| ||||  |  || || || 
Sbjct: 1641 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 1582

                                                                        
Query: 406  gagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtcc 465
            ||||||||||| |||||||||| ||| || |  |||||||| || ||||| || ||||||
Sbjct: 1581 gagcagttgtcaaccatgaaggacactcccctggcgtgcataaatgggtttagagagtcc 1522

                                                                        
Query: 466  actgactcgatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagc 525
            || || || ||||| |||||||||||||| || ||||| |||||||| ||||||||||  
Sbjct: 1521 acggattcaatcacactctcgttgatgatttctgagtaagagtgacctttcttcctcaag 1462

                                                  
Query: 526  acctcgatctgggccatcataagtgcaacgtaaactcc 563
            | ||| ||||| |||||||||||||| || ||||||||
Sbjct: 1461 atctcaatctgagccatcataagtgctacataaactcc 1424



to top

>gb|AY062094.1| Arabidopsis thaliana AT3g58610/F14P22_200 mRNA, complete cds
          Length = 1990

 Score =  133 bits (67), Expect = 7e-28
 Identities = 180/218 (82%)
 Strand = Plus / Minus

                                                                        
Query: 346  tgggtcangatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 405
            ||||||| ||||||||| || || |||||||| |||||||| ||||  |  || || || 
Sbjct: 1639 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 1580

                                                                        
Query: 406  gagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtcc 465
            ||||||||||| |||||||||| ||| || |  |||||||| || ||||| || ||||||
Sbjct: 1579 gagcagttgtcaaccatgaaggacactcccctggcgtgcataaatgggtttagagagtcc 1520

                                                                        
Query: 466  actgactcgatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagc 525
            || || || ||||| |||||||||||||| || ||||| |||||||| ||||||||||  
Sbjct: 1519 acggattcaatcacactctcgttgatgatttctgagtaagagtgacctttcttcctcaag 1460

                                                  
Query: 526  acctcgatctgggccatcataagtgcaacgtaaactcc 563
            | ||| ||||| |||||||||||||| || ||||||||
Sbjct: 1459 atctcaatctgagccatcataagtgctacataaactcc 1422



to top

>dbj|AK221938.1| Arabidopsis thaliana mRNA for ketol-acid reductoisomerase, complete
           cds, clone: RAFL22-45-C07
          Length = 1266

 Score =  133 bits (67), Expect = 7e-28
 Identities = 180/218 (82%)
 Strand = Plus / Minus

                                                                       
Query: 346 tgggtcangatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 405
           ||||||| ||||||||| || || |||||||| |||||||| ||||  |  || || || 
Sbjct: 917 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 858

                                                                       
Query: 406 gagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtcc 465
           ||||||||||| |||||||||| ||| || |  |||||||| || ||||| || ||||||
Sbjct: 857 gagcagttgtcaaccatgaaggacactcccctggcgtgcataaatgggtttagagagtcc 798

                                                                       
Query: 466 actgactcgatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagc 525
           || || || ||||| |||||||||||||| || ||||| |||||||| ||||||||||  
Sbjct: 797 acggattcaatcacactctcgttgatgatttctgagtaagagtgacctttcttcctcaag 738

                                                 
Query: 526 acctcgatctgggccatcataagtgcaacgtaaactcc 563
           | ||| ||||| |||||||||||||| || ||||||||
Sbjct: 737 atctcaatctgagccatcataagtgctacataaactcc 700



to top

>gb|AF324671.2|AF324671 Arabidopsis thaliana AT3g58610 (AT3g58610/F14P22_200) mRNA, complete
            cds
          Length = 1980

 Score =  133 bits (67), Expect = 7e-28
 Identities = 180/218 (82%)
 Strand = Plus / Minus

                                                                        
Query: 346  tgggtcangatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 405
            ||||||| ||||||||| || || |||||||| |||||||| ||||  |  || || || 
Sbjct: 1641 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 1582

                                                                        
Query: 406  gagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtcc 465
            ||||||||||| |||||||||| ||| || |  |||||||| || ||||| || ||||||
Sbjct: 1581 gagcagttgtcaaccatgaaggacactcccctggcgtgcataaatgggtttagagagtcc 1522

                                                                        
Query: 466  actgactcgatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagc 525
            || || || ||||| |||||||||||||| || ||||| |||||||| ||||||||||  
Sbjct: 1521 acggattcaatcacactctcgttgatgatttctgagtaagagtgacctttcttcctcaag 1462

                                                  
Query: 526  acctcgatctgggccatcataagtgcaacgtaaactcc 563
            | ||| ||||| |||||||||||||| || ||||||||
Sbjct: 1461 atctcaatctgagccatcataagtgctacataaactcc 1424



to top

>emb|BX823796.1|CNS0A4R1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS76ZD11 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1983

 Score =  117 bits (59), Expect = 4e-23
 Identities = 178/218 (81%)
 Strand = Plus / Minus

                                                                        
Query: 346  tgggtcangatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 405
            ||||||| ||||||||| || || |||||||| |||||||| ||||  |  || || || 
Sbjct: 1656 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 1597

                                                                        
Query: 406  gagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtcc 465
            ||||||||||| |||||||||| ||| ||    |||||||| |  ||||| || ||||||
Sbjct: 1596 gagcagttgtcaaccatgaaggacactcccgtggcgtgcataagtgggtttagagagtcc 1537

                                                                        
Query: 466  actgactcgatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagc 525
            || || || ||||| |||||||||||||| || ||||| |||||||| ||||||||||  
Sbjct: 1536 acggattcaatcacactctcgttgatgatttctgagtaagagtgacctttcttcctcaag 1477

                                                  
Query: 526  acctcgatctgggccatcataagtgcaacgtaaactcc 563
            | ||| ||||| |||||||||||||| || ||||||||
Sbjct: 1476 atctcaatctgagccatcataagtgctacataaactcc 1439



to top

>emb|Y17796.1|PSY17796 Pisum sativum mRNA for ketol-acid reductoisomerase
          Length = 2036

 Score =  111 bits (56), Expect = 3e-21
 Identities = 229/287 (79%)
 Strand = Plus / Minus

                                                                        
Query: 259  atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 318
            ||||| ||||| || ||||| |||| |||||||||||| ||||||||||||||||| || 
Sbjct: 1658 atggccccgtgcactgggtctgacacgaagttgctgatcaggtcctggttgatgggagct 1599

                                                                        
Query: 319  tccttgtccaccgtcacaaacgcctgctgggtcangatgtagtcgaagcggggcgcccac 378
             |  ||||||| | ||| || |||||||| || |  ||||| || || | ||| ||||| 
Sbjct: 1598 ccactgtccactgccaccaaggcctgctgagttagaatgtaatcaaatctgggagcccat 1539

                                                                        
Query: 379  ttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccaccccacgc 438
            ||||| || |||| ||  || || || ||||||||||| |||||||| |  || || || 
Sbjct: 1538 ttccttgaacccaaccttgctgtggttgagcagttgtcaaccatgaaagaaacaccgcga 1479

                                                                        
Query: 439  gcgtgcatgaacgggttcagcgagtccactgactcgatcacgctctcgttgatgatctca 498
            || |||||||| || ||||  || || || ||||||||||| ||||| || ||||| |||
Sbjct: 1478 gcatgcatgaatggattcaaagaatcaacagactcgatcacactctcattaatgatttca 1419

                                                           
Query: 499  gagtaggagtgacccttcttcctcagcacctcgatctgggccatcat 545
            ||||| || || |||||||||||||  ||||| ||||||||||||||
Sbjct: 1418 gagtaagaatgccccttcttcctcaagacctcaatctgggccatcat 1372



to top

>emb|X69880.1|ATAAI A.thaliana gene for acetohydroxy acid isomeroreductase
          Length = 4395

 Score =  109 bits (55), Expect = 1e-20
 Identities = 147/178 (82%)
 Strand = Plus / Minus

                                                                        
Query: 346  tgggtcangatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 405
            ||||||| ||||||||| || || |||||||| |||||||| ||||  |  || || || 
Sbjct: 3980 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 3921

                                                                        
Query: 406  gagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtcc 465
            ||||||||||| |||||||||| ||| || |  |||||||| || ||||| || ||||||
Sbjct: 3920 gagcagttgtcaaccatgaaggacactcccctggcgtgcataaatgggtttagagagtcc 3861

                                                                      
Query: 466  actgactcgatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctca 523
            || || || ||||| |||||||||||||| || ||||| |||||||| ||||||||||
Sbjct: 3860 acggattcaatcacactctcgttgatgatttctgagtaagagtgacctttcttcctca 3803



to top

>emb|AL137082.1|ATF14P22 Arabidopsis thaliana DNA chromosome 3, BAC clone F14P22
          Length = 94239

 Score =  109 bits (55), Expect = 1e-20
 Identities = 147/178 (82%)
 Strand = Plus / Minus

                                                                         
Query: 346   tgggtcangatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 405
             ||||||| ||||||||| || || |||||||| |||||||| ||||  |  || || || 
Sbjct: 67959 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 67900

                                                                         
Query: 406   gagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtcc 465
             ||||||||||| |||||||||| ||| || |  |||||||| || ||||| || ||||||
Sbjct: 67899 gagcagttgtcaaccatgaaggacactcccctggcgtgcataaatgggtttagagagtcc 67840

                                                                       
Query: 466   actgactcgatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctca 523
             || || || ||||| |||||||||||||| || ||||| |||||||| ||||||||||
Sbjct: 67839 acggattcaatcacactctcgttgatgatttctgagtaagagtgacctttcttcctca 67782



to top

>gb|AY702346.1| Phytophthora infestans ketol-acid reductoisomerase mRNA, partial cds
          Length = 1257

 Score =  109 bits (55), Expect = 1e-20
 Identities = 114/134 (85%)
 Strand = Plus / Minus

                                                                        
Query: 340  gcctgctgggtcangatgtagtcgaagcggggcgcccacttcctcgaccccagccgggcc 399
            |||||||  |||| ||||||||||||||| || |||||||| |  || ||||| || || 
Sbjct: 1130 gcctgctccgtcaggatgtagtcgaagcgaggagcccacttacgggagcccagacgagcg 1071

                                                                        
Query: 400  gtcgtcgagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagc 459
            ||||| |||||||||||||||||| |||| || || || ||||||||| |||||||||||
Sbjct: 1070 gtcgtggagcagttgtccaccatgtaggcgacgccgcgagcgtgcatgtacgggttcagc 1011

                          
Query: 460  gagtccactgactc 473
            |||||||| |||||
Sbjct: 1010 gagtccacagactc 997



to top

>emb|X57073.1|SOAHRI S.oleracea AHRI mRNA for acetohydroxy acid reductoisomerase
          Length = 2050

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 97/113 (85%)
 Strand = Plus / Minus

                                                                        
Query: 442  tgcatgaacgggttcagcgagtccactgactcgatcacgctctcgttgatgatctcagag 501
            |||||||| |||||||  || |||||||  || ||||| ||||||||||||||||| |||
Sbjct: 1545 tgcatgaaggggttcaaggaatccactgcttcaatcacactctcgttgatgatctccgag 1486

                                                                 
Query: 502  taggagtgacccttcttcctcagcacctcgatctgggccatcataagtgcaac 554
            || |||||||||||||||||||  | ||| |||||||||||||| || |||||
Sbjct: 1485 tacgagtgacccttcttcctcaagatctctatctgggccatcattagagcaac 1433



to top

>emb|AJ251333.1|PSA251333 Pisum sativum aair gene for acetohydroxy acid isomeroreductase, exons
            1-9
          Length = 3343

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 221/279 (79%)
 Strand = Plus / Minus

                                                                        
Query: 259  atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 318
            ||||| ||||| || ||||| |||| |||||||||||| ||||||||||||||||| || 
Sbjct: 3013 atggccccgtgcactgggtctgacacgaagttgctgatcaggtcctggttgatgggagct 2954

                                                                        
Query: 319  tccttgtccaccgtcacaaacgcctgctgggtcangatgtagtcgaagcggggcgcccac 378
             |  ||||||| | ||| || |||||||| || |  ||||| || || | ||| ||||| 
Sbjct: 2953 ccactgtccactgccaccaaggcctgctgagttagaatgtaatcaaatctgggagcccat 2894

                                                                        
Query: 379  ttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccaccccacgc 438
            ||||| || |||| ||  || || || ||||||||||| |||||||| |  || || || 
Sbjct: 2893 ttccttgaacccaaccttgctgtggttgagcagttgtcaaccatgaaagaaacaccgcga 2834

                                                                        
Query: 439  gcgtgcatgaacgggttcagcgagtccactgactcgatcacgctctcgttgatgatctca 498
            || |||||||| || ||||  || || || ||||||||||| ||||| || ||||| |||
Sbjct: 2833 gcatgcatgaatggattcaaagaatcaacagactcgatcacactctcattaatgatttca 2774

                                                   
Query: 499  gagtaggagtgacccttcttcctcagcacctcgatctgg 537
            ||||| || || |||||||||||||  ||||| ||||||
Sbjct: 2773 gagtaagaatgccccttcttcctcaagacctcaatctgg 2735



to top

>gb|AC135231.23| Medicago truncatula clone mth2-28m10, complete sequence
          Length = 106771

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 208/265 (78%)
 Strand = Plus / Plus

                                                                         
Query: 259   atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 318
             ||||| ||||| || ||||| ||||||||||||||||| | |||||||||||| || || 
Sbjct: 73387 atggctccgtgcactgggtctgacatgaagttgctgattaagtcctggttgataggagct 73446

                                                                         
Query: 319   tccttgtccaccgtcacaaacgcctgctgggtcangatgtagtcgaagcggggcgcccac 378
              | |||||||| | ||| || |||||||| || | ||| || || || | ||| ||||| 
Sbjct: 73447 ccattgtccactgccaccaaagcctgctgagttaggatataatcaaatctgggggcccat 73506

                                                                         
Query: 379   ttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccaccccacgc 438
             ||||| || || | ||  || || || ||||||||||| |||||||| |  || || || 
Sbjct: 73507 ttccttgaacctaaccttgctgtggttgagcagttgtcaaccatgaaagaaacaccccga 73566

                                                                         
Query: 439   gcgtgcatgaacgggttcagcgagtccactgactcgatcacgctctcgttgatgatctca 498
             || |||||||| || ||||  || || ||||| |||||||| ||||| || ||||| |||
Sbjct: 73567 gcatgcatgaatggattcaaagaatcaactgattcgatcacactctcattaatgatttca 73626

                                      
Query: 499   gagtaggagtgacccttcttcctca 523
             ||||| || || || ||||||||||
Sbjct: 73627 gagtaagaatgtcctttcttcctca 73651



to top

>gb|DQ448854.1| Theobroma cacao putative ketol acid reductoisomerase precursor-like
           protein, mRNA, partial sequence
          Length = 258

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                   
Query: 259 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatggg 314
           ||||| ||||| || ||||| |||| ||||||||||||  | || |||||||||||
Sbjct: 169 atggcaccgtgcaccgggtctgacaggaagttgctgatcngatcttggttgatggg 114



to top

>gb|AC136921.8| Mus musculus chromosome 17, clone RP23-210D4, complete sequence
          Length = 244237

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 285   gaagttgctgatgaggtcctg 305
             |||||||||||||||||||||
Sbjct: 46822 gaagttgctgatgaggtcctg 46842



to top

>gb|AC129095.12| Mus musculus strain C57BL/6J clone rp23-360g16 map 17, complete sequence
          Length = 209946

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 285    gaagttgctgatgaggtcctg 305
              |||||||||||||||||||||
Sbjct: 107699 gaagttgctgatgaggtcctg 107719



to top

>gb|AC027251.6| Homo sapiens chromosome 8, clone RP11-14G5, complete sequence
          Length = 130377

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 506   agtgacccttcttcctcagcacctc 530
             ||||| |||||||||||||||||||
Sbjct: 36169 agtgatccttcttcctcagcacctc 36193



to top

>dbj|AK035823.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:9630008E23 product:mitogen
            activated protein kinase kinase kinase 4, full insert
            sequence
          Length = 3816

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 285  gaagttgctgatgaggtcctg 305
            |||||||||||||||||||||
Sbjct: 2783 gaagttgctgatgaggtcctg 2803



to top

>gb|AC153999.7| Mus musculus 6 BAC RP24-395E8 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 188196

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 506   agtgacccttcttcctcagca 526
             |||||||||||||||||||||
Sbjct: 36870 agtgacccttcttcctcagca 36850



to top

>emb|BX119963.5| Zebrafish DNA sequence from clone DKEY-6A5 in linkage group 4, complete
              sequence
          Length = 229125

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 73     acacagcagctcacaggttcaaaca 97
              ||||||||||||||||||| |||||
Sbjct: 144182 acacagcagctcacaggtttaaaca 144158



to top

>gb|AC087901.20| Mus musculus strain C57BL/6J chromosome 17 clone rp23-22l23, complete
              sequence
          Length = 214372

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 285    gaagttgctgatgaggtcctg 305
              |||||||||||||||||||||
Sbjct: 151591 gaagttgctgatgaggtcctg 151611



to top

>gb|AC154000.4| Mus musculus 6 BAC RP24-313C5 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 198580

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 506   agtgacccttcttcctcagca 526
             |||||||||||||||||||||
Sbjct: 39352 agtgacccttcttcctcagca 39372



to top

>ref|XM_428106.1| PREDICTED: Gallus gallus similar to hypothetical protein LOC255104
           (LOC430549), partial mRNA
          Length = 561

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 70  ctgacacagcagctcacagg 89
           ||||||||||||||||||||
Sbjct: 279 ctgacacagcagctcacagg 298



to top

>emb|CR376778.9| Zebrafish DNA sequence from clone DKEYP-94F12 in linkage group 25,
              complete sequence
          Length = 185814

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 4      tttattatttgagaagaaac 23
              ||||||||||||||||||||
Sbjct: 122125 tttattatttgagaagaaac 122106



to top

>ref|XM_789042.1| PREDICTED: Strongylocentrotus purpuratus similar to Forkhead box
           protein F1 (Forkhead-related protein FKHL5)
           (Forkhead-related transcription factor 1) (FREAC-1)
           (Forkhead-related activator-1) (LOC589400), mRNA
          Length = 1248

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 282 catgaagttgctgatgaggt 301
           ||||||||||||||||||||
Sbjct: 206 catgaagttgctgatgaggt 187



to top

>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29
          Length = 303550

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 386   accccagccgggccgtcgtcgagc 409
             ||||| ||||||||||||||||||
Sbjct: 24366 acccccgccgggccgtcgtcgagc 24343



to top

>gb|AY007310.1| Coturnix coturnix target of Jun 3 (TOJ3) mRNA, complete cds
          Length = 1772

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 293  tgatgaggtcctggttgatg 312
            ||||||||||||||||||||
Sbjct: 1575 tgatgaggtcctggttgatg 1556



to top

>gb|AC138666.6| Mus musculus chromosome 5, clone RP24-140D11, complete sequence
          Length = 209938

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 506    agtgacccttcttcctcagc 525
              ||||||||||||||||||||
Sbjct: 145642 agtgacccttcttcctcagc 145661



to top

>emb|CR762419.14| Zebrafish DNA sequence from clone CH211-247A18 in linkage group 12,
             complete sequence
          Length = 152153

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     ttttattatttgagaagaaa 22
             ||||||||||||||||||||
Sbjct: 70814 ttttattatttgagaagaaa 70833



to top

>gb|AC123917.25| Mus musculus chromosome 15, clone RP23-281P5, complete sequence
          Length = 184959

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 73     acacagcagctcacaggttcaaac 96
              |||||||||| |||||||||||||
Sbjct: 108353 acacagcagcacacaggttcaaac 108376


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,881,782
Number of Sequences: 3902068
Number of extensions: 3881782
Number of successful extensions: 70071
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69948
Number of HSP's gapped (non-prelim): 116
length of query: 563
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 540
effective length of database: 17,143,297,704
effective search space: 9257380760160
effective search space used: 9257380760160
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top