Clone Name | rbasd17a17 |
---|---|
Clone Library Name | barley_pub |
>gb|AY103782.1| Zea mays PCO080860 mRNA sequence Length = 2117 Score = 462 bits (233), Expect = e-127 Identities = 357/399 (89%) Strand = Plus / Minus Query: 165 aatctaggcagactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagat 224 |||||||| |||||||||||||||||| ||||| ||||| || | ||| | ||| ||||| Sbjct: 1872 aatctaggaagactgccggagctccgggcgcacaaagtcggcgttggcaggcacagagat 1813 Query: 225 gtcgacggtgggcctcagctcggcgcanacctcgatggcgccgtggacggggtccgacat 284 ||||||||||||||||||||||||||| ||||| ||||| || ||||| |||||||||| Sbjct: 1812 gtcgacggtgggcctcagctcggcgcagacctcaatggcaccatggacagggtccgacaa 1753 Query: 285 gaagttgctgatgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctg 344 ||||||||||||||||||||||||||| || || ||||||||||||| |||||| ||||| Sbjct: 1752 gaagttgctgatgaggtcctggttgatcggggcgtccttgtccaccgccacaaaggcctg 1693 Query: 345 ctgggtcangatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgt 404 ||| |||| ||||||||||||||| |||||||||||||| || ||||| || ||||| || Sbjct: 1692 ctgcgtcaggatgtagtcgaagcgaggcgcccacttcctggatcccaggcgagccgttgt 1633 Query: 405 cgagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtc 464 ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 1632 ggagcagttgtccaccatgaaggcgaccccacgggcgtgcatgaacgggttcagcgagtc 1573 Query: 465 cactgactcgatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcag 524 ||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1572 caccgactcaatcacgctctcgttgatgatctcagagtaggagtgccccttcttcctcag 1513 Query: 525 cacctcgatctgggccatcataagtgcaacgtaaactcc 563 | ||| ||||| |||||||| || |||| ||| ||||| Sbjct: 1512 gatctcaatctgagccatcatcagggcaatgtacactcc 1474
>gb|BT016666.1| Zea mays clone Contig499 mRNA sequence Length = 1992 Score = 454 bits (229), Expect = e-124 Identities = 356/399 (89%) Strand = Plus / Minus Query: 165 aatctaggcagactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagat 224 |||||||| |||||||||||||||||| ||||| ||||| || | ||| | ||| ||||| Sbjct: 1780 aatctaggaagactgccggagctccgggcgcacaaagtcggcgttggcaggcacagagat 1721 Query: 225 gtcgacggtgggcctcagctcggcgcanacctcgatggcgccgtggacggggtccgacat 284 ||||||||||||||||||||||||||| ||||| ||||| || ||||| |||||||||| Sbjct: 1720 gtcgacggtgggcctcagctcggcgcagacctcaatggcaccatggacagggtccgacaa 1661 Query: 285 gaagttgctgatgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctg 344 ||||||||||||||||||||||||||| || || ||||||||||||| ||| || ||||| Sbjct: 1660 gaagttgctgatgaggtcctggttgatcggggcgtccttgtccaccgccacgaaggcctg 1601 Query: 345 ctgggtcangatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgt 404 ||| |||| ||||||||||||||| |||||||||||||| || ||||| || ||||| || Sbjct: 1600 ctgcgtcaggatgtagtcgaagcgaggcgcccacttcctggatcccaggcgagccgttgt 1541 Query: 405 cgagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtc 464 ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 1540 ggagcagttgtccaccatgaaggcgaccccacgggcgtgcatgaacgggttcagcgagtc 1481 Query: 465 cactgactcgatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcag 524 ||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1480 caccgactcaatcacgctctcgttgatgatctcagagtaggagtgccccttcttcctcag 1421 Query: 525 cacctcgatctgggccatcataagtgcaacgtaaactcc 563 | ||| ||||| |||||||| || |||| ||| ||||| Sbjct: 1420 gatctcaatctgagccatcatcagggcaatgtacactcc 1382
>dbj|AK061892.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-G05, full insert sequence Length = 1153 Score = 434 bits (219), Expect = e-118 Identities = 346/389 (88%) Strand = Plus / Minus Query: 175 gactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggtg 234 |||||||||||||| || |||||||| || || | ||| | ||| ||||||||||||||| Sbjct: 983 gactgccggagctctgggcgcacgaaatcggcgttggcaggcacggagatgtcgacggtg 924 Query: 235 ggcctcagctcggcgcanacctcgatggcgccgtggacggggtccgacatgaagttgctg 294 |||| |||||| ||||| |||||||| ||||| ||||||||||| ||||||||||||||| Sbjct: 923 ggccgcagctcagcgcacacctcgattgcgccatggacggggtcggacatgaagttgctg 864 Query: 295 atgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcang 354 |||||||||||||||||||| |||||||||||||| ||||| || || |||||||||| | Sbjct: 863 atgaggtcctggttgatgggagcatccttgtccactgtcacgaatgcttgctgggtcagg 804 Query: 355 atgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtcgagcagttg 414 |||||||||||||| |||||||| ||||| || ||||| || |||||||| ||||||||| Sbjct: 803 atgtagtcgaagcgtggcgcccatttccttgatcccagacgagccgtcgttgagcagttg 744 Query: 415 tccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtccactgactcg 474 || |||||||||||||| ||||| || |||||||| |||||||| |||||||| |||||| Sbjct: 743 tcaaccatgaaggccactccacgagcatgcatgaaggggttcagtgagtccacggactcg 684 Query: 475 atcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagcacctcgatc 534 || |||||||||||||||||||| |||||||||||||||||||| || || ||||||||| Sbjct: 683 atgacgctctcgttgatgatctctgagtaggagtgacccttctttctaaggacctcgatc 624 Query: 535 tgggccatcataagtgcaacgtaaactcc 563 || |||||||| ||||||||||| ||||| Sbjct: 623 tgagccatcatcagtgcaacgtagactcc 595
>dbj|AK065295.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002N13, full insert sequence Length = 1983 Score = 434 bits (219), Expect = e-118 Identities = 346/389 (88%) Strand = Plus / Minus Query: 175 gactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggtg 234 |||||||||||||| || |||||||| || || | ||| | ||| ||||||||||||||| Sbjct: 1795 gactgccggagctctgggcgcacgaaatcggcgttggcaggcacggagatgtcgacggtg 1736 Query: 235 ggcctcagctcggcgcanacctcgatggcgccgtggacggggtccgacatgaagttgctg 294 |||| |||||| ||||| |||||||| ||||| ||||||||||| ||||||||||||||| Sbjct: 1735 ggccgcagctcagcgcacacctcgattgcgccatggacggggtcggacatgaagttgctg 1676 Query: 295 atgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcang 354 |||||||||||||||||||| |||||||||||||| ||||| || || |||||||||| | Sbjct: 1675 atgaggtcctggttgatgggagcatccttgtccactgtcacgaatgcttgctgggtcagg 1616 Query: 355 atgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtcgagcagttg 414 |||||||||||||| |||||||| ||||| || ||||| || |||||||| ||||||||| Sbjct: 1615 atgtagtcgaagcgtggcgcccatttccttgatcccagacgagccgtcgttgagcagttg 1556 Query: 415 tccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtccactgactcg 474 || |||||||||||||| ||||| || |||||||| |||||||| |||||||| |||||| Sbjct: 1555 tcaaccatgaaggccactccacgagcatgcatgaaggggttcagtgagtccacggactcg 1496 Query: 475 atcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagcacctcgatc 534 || |||||||||||||||||||| |||||||||||||||||||| || || ||||||||| Sbjct: 1495 atgacgctctcgttgatgatctctgagtaggagtgacccttctttctaaggacctcgatc 1436 Query: 535 tgggccatcataagtgcaacgtaaactcc 563 || |||||||| ||||||||||| ||||| Sbjct: 1435 tgagccatcatcagtgcaacgtagactcc 1407
>gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1735_C10, complete sequence Length = 187034 Score = 402 bits (203), Expect = e-109 Identities = 321/361 (88%) Strand = Plus / Plus Query: 175 gactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggtg 234 |||||||||||||| || |||||||| || || | ||| | ||| ||||||||||||||| Sbjct: 143341 gactgccggagctctgggcgcacgaaatcggcgttggcaggcacggagatgtcgacggtg 143400 Query: 235 ggcctcagctcggcgcanacctcgatggcgccgtggacggggtccgacatgaagttgctg 294 |||| |||||| ||||| |||||||| ||||| ||||||||||| ||||||||||||||| Sbjct: 143401 ggccgcagctcagcgcacacctcgattgcgccatggacggggtcggacatgaagttgctg 143460 Query: 295 atgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcang 354 |||||||||||||||||||| |||||||||||||| ||||| || || |||||||||| | Sbjct: 143461 atgaggtcctggttgatgggagcatccttgtccactgtcacgaatgcttgctgggtcagg 143520 Query: 355 atgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtcgagcagttg 414 |||||||||||||| |||||||| ||||| || ||||| || |||||||| ||||||||| Sbjct: 143521 atgtagtcgaagcgtggcgcccatttccttgatcccagacgagccgtcgttgagcagttg 143580 Query: 415 tccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtccactgactcg 474 || |||||||||||||| ||||| || |||||||| |||||||| |||||||| |||||| Sbjct: 143581 tcaaccatgaaggccactccacgagcatgcatgaaggggttcagtgagtccacggactcg 143640 Query: 475 atcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagcacctcgatc 534 || |||||||||||||||||||| |||||||||||||||||||| || || ||||||||| Sbjct: 143641 atgacgctctcgttgatgatctctgagtaggagtgacccttctttctaaggacctcgatc 143700 Query: 535 t 535 | Sbjct: 143701 t 143701
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 402 bits (203), Expect = e-109 Identities = 321/361 (88%) Strand = Plus / Plus Query: 175 gactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggtg 234 |||||||||||||| || |||||||| || || | ||| | ||| ||||||||||||||| Sbjct: 28359099 gactgccggagctctgggcgcacgaaatcggcgttggcaggcacggagatgtcgacggtg 28359158 Query: 235 ggcctcagctcggcgcanacctcgatggcgccgtggacggggtccgacatgaagttgctg 294 |||| |||||| ||||| |||||||| ||||| ||||||||||| ||||||||||||||| Sbjct: 28359159 ggccgcagctcagcgcacacctcgattgcgccatggacggggtcggacatgaagttgctg 28359218 Query: 295 atgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcang 354 |||||||||||||||||||| |||||||||||||| ||||| || || |||||||||| | Sbjct: 28359219 atgaggtcctggttgatgggagcatccttgtccactgtcacgaatgcttgctgggtcagg 28359278 Query: 355 atgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtcgagcagttg 414 |||||||||||||| |||||||| ||||| || ||||| || |||||||| ||||||||| Sbjct: 28359279 atgtagtcgaagcgtggcgcccatttccttgatcccagacgagccgtcgttgagcagttg 28359338 Query: 415 tccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtccactgactcg 474 || |||||||||||||| ||||| || |||||||| |||||||| |||||||| |||||| Sbjct: 28359339 tcaaccatgaaggccactccacgagcatgcatgaaggggttcagtgagtccacggactcg 28359398 Query: 475 atcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagcacctcgatc 534 || |||||||||||||||||||| |||||||||||||||||||| || || ||||||||| Sbjct: 28359399 atgacgctctcgttgatgatctctgagtaggagtgacccttctttctaaggacctcgatc 28359458 Query: 535 t 535 | Sbjct: 28359459 t 28359459
>gb|BT009123.1| Triticum aestivum clone wl1n.pk0013.e12:fis, full insert mRNA sequence Length = 1957 Score = 317 bits (160), Expect = 2e-83 Identities = 332/390 (85%) Strand = Plus / Minus Query: 174 agactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggt 233 |||||| || ||||| ||||||||||| |||||||| || ||||| |||||||| || || Sbjct: 1766 agactgtcgaagctctggacgcacgaaatcagcatcagcggtcactgagatgtcaacagt 1707 Query: 234 gggcctcagctcggcgcanacctcgatggcgccgtggacggggtccgacatgaagttgct 293 ||||||||||| ||||| || |||||||| |||||||| ||||| |||||||||||||| Sbjct: 1706 gggcctcagctgagcgcagacttcgatggcaccgtggacagggtcagacatgaagttgct 1647 Query: 294 gatgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcan 353 ||||||||| |||||||| || || | |||||| || |||||||||||||| ||||||| Sbjct: 1646 gatgaggtcttggttgatcggtgctttcttgtcaacagtcacaaacgcctgttgggtcaa 1587 Query: 354 gatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtcgagcagtt 413 |||||| |||||||| || ||||||||||| || |||| || || || || |||||||| Sbjct: 1586 gatgtaatcgaagcgtggtgcccacttcctagatcccaaacgagcagttgtggagcagtt 1527 Query: 414 gtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtccactgactc 473 || |||||||||||||| || || || |||||||||||||||| ||||||||| ||||| Sbjct: 1526 atcgaccatgaaggccacaccgcgagcatgcatgaacgggttcaacgagtccacggactc 1467 Query: 474 gatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagcacctcgat 533 ||||| |||||| || || ||||| ||||| ||||| ||||||||||| || ||||| || Sbjct: 1466 gatcaggctctcattaattatctctgagtaagagtggcccttcttcctaaggacctcaat 1407 Query: 534 ctgggccatcataagtgcaacgtaaactcc 563 ||| |||||||| |||||||| || ||||| Sbjct: 1406 ctgagccatcattagtgcaacatacactcc 1377
>gb|AY103707.1| Zea mays PCO072121 mRNA sequence Length = 1985 Score = 317 bits (160), Expect = 2e-83 Identities = 332/390 (85%) Strand = Plus / Minus Query: 174 agactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggt 233 |||||| || ||||| ||||||||||| |||||||| || ||||| |||||||| || || Sbjct: 1777 agactgtcgaagctctggacgcacgaaatcagcatcagcggtcactgagatgtcaacagt 1718 Query: 234 gggcctcagctcggcgcanacctcgatggcgccgtggacggggtccgacatgaagttgct 293 ||||||||||| ||||| || |||||||| |||||||| ||||| |||||||||||||| Sbjct: 1717 gggcctcagctgagcgcagacttcgatggcaccgtggacagggtcagacatgaagttgct 1658 Query: 294 gatgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcan 353 ||||||||| |||||||| || || | |||||| || |||||||||||||| ||||||| Sbjct: 1657 gatgaggtcttggttgatcggtgctttcttgtcaacagtcacaaacgcctgttgggtcaa 1598 Query: 354 gatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtcgagcagtt 413 |||||| |||||||| || ||||||||||| || |||| || || || || |||||||| Sbjct: 1597 gatgtaatcgaagcgtggtgcccacttcctagatcccaaacgagcagttgtggagcagtt 1538 Query: 414 gtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtccactgactc 473 || |||||||||||||| || || || |||||||||||||||| ||||||||| ||||| Sbjct: 1537 atcgaccatgaaggccacaccgcgagcatgcatgaacgggttcaacgagtccacggactc 1478 Query: 474 gatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagcacctcgat 533 ||||| |||||| || || ||||| ||||| ||||| ||||||||||| || ||||| || Sbjct: 1477 gatcaggctctcattaattatctctgagtaagagtggcccttcttcctaaggacctcaat 1418 Query: 534 ctgggccatcataagtgcaacgtaaactcc 563 ||| |||||||| |||||||| || ||||| Sbjct: 1417 ctgagccatcattagtgcaacatacactcc 1388
>gb|BT016378.1| Zea mays clone Contig211 mRNA sequence Length = 1029 Score = 285 bits (144), Expect = 8e-74 Identities = 328/390 (84%) Strand = Plus / Minus Query: 174 agactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggt 233 |||||| || ||||| || |||||||| ||||||| || ||||| |||||||| || || Sbjct: 817 agactgtcgaagctctgggcgcacgaaatcagcatgagcggtcactgagatgtcaacagt 758 Query: 234 gggcctcagctcggcgcanacctcgatggcgccgtggacggggtccgacatgaagttgct 293 ||||||||||| ||||| || |||||||| |||||||| ||||| |||||||||||||| Sbjct: 757 gggcctcagctgagcgcagacttcgatggcaccgtggacagggtcagacatgaagttgct 698 Query: 294 gatgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcan 353 ||||||||| |||||||| || || | |||||| || |||||||||||||| ||||||| Sbjct: 697 gatgaggtcttggttgatcggtgctttcttgtcaacagtcacaaacgcctgttgggtcaa 638 Query: 354 gatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtcgagcagtt 413 |||||| |||||||| || ||||| ||||| || |||| || || || || |||||||| Sbjct: 637 gatgtaatcgaagcgtggtgcccatttcctagatcccaaacgagcagttgtggagcagtt 578 Query: 414 gtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtccactgactc 473 || |||||||||||||| || || || |||||||||||||||| ||||||||| ||||| Sbjct: 577 atcgaccatgaaggccacaccgcgagcatgcatgaacgggttcaacgagtccacggactc 518 Query: 474 gatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagcacctcgat 533 ||||| | |||| || || ||||| ||||| ||||| ||||||||||| || ||||| || Sbjct: 517 gatcagggtctcattaattatctctgagtaagagtggcccttcttcctaaggacctcaat 458 Query: 534 ctgggccatcataagtgcaacgtaaactcc 563 ||| |||||||| |||||||| || ||||| Sbjct: 457 ctgagccatcattagtgcaacatacactcc 428
>ref|NM_192395.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1746 Score = 242 bits (122), Expect = 1e-60 Identities = 315/380 (82%) Strand = Plus / Minus Query: 184 agctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagc 243 ||||| |||||||| ||||| ||||| || | ||| || ||||| ||||||||||||| | Sbjct: 1730 agctctggacgcacaaagtctgcatcagcaggcactgaaatgtcaacggtgggcctcaac 1671 Query: 244 tcggcgcanacctcgatggcgccgtggacggggtccgacatgaagttgctgatgaggtcc 303 | || || || || ||||| | |||||||| || || | ||| |||||||||||||| Sbjct: 1670 tgagcacagacttcaatggcactatggacgggatcggagaagaaattgctgatgaggtct 1611 Query: 304 tggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcangatgtagtcg 363 || || | || |||| |||||| || |||||||| || || ||||||| |||||||||| Sbjct: 1610 tgattaactggagcattcttgtcaacagtcacaaaagcttgttgggtcaagatgtagtcg 1551 Query: 364 aagcggggcgcccacttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatg 423 ||||| |||||||| ||||| || |||| |||||| || || |||||||| || |||||| Sbjct: 1550 aagcgtggcgcccatttccttgatcccaaccgggctgttgtggagcagttatcaaccatg 1491 Query: 424 aaggccaccccacgcgcgtgcatgaacgggttcagcgagtccactgactcgatcacgctc 483 |||||||||||||| ||||||||||| |||||||| || ||||| |||||||||| ||| Sbjct: 1490 aaggccaccccacgagcgtgcatgaatgggttcagggaatccacagactcgatcaaactc 1431 Query: 484 tcgttgatgatctcagagtaggagtgacccttcttcctcagcacctcgatctgggccatc 543 |||||||||||||| ||||| ||||| |||||||| || || || || ||||| |||||| Sbjct: 1430 tcgttgatgatctccgagtaagagtggcccttctttctaaggacttcaatctgtgccatc 1371 Query: 544 ataagtgcaacgtaaactcc 563 ||||||||||| || ||||| Sbjct: 1370 ataagtgcaacatacactcc 1351
>dbj|AK072075.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013115K02, full insert sequence Length = 1917 Score = 242 bits (122), Expect = 1e-60 Identities = 315/380 (82%) Strand = Plus / Minus Query: 184 agctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagc 243 ||||| |||||||| ||||| ||||| || | ||| || ||||| ||||||||||||| | Sbjct: 1681 agctctggacgcacaaagtctgcatcagcaggcactgaaatgtcaacggtgggcctcaac 1622 Query: 244 tcggcgcanacctcgatggcgccgtggacggggtccgacatgaagttgctgatgaggtcc 303 | || || || || ||||| | |||||||| || || | ||| |||||||||||||| Sbjct: 1621 tgagcacagacttcaatggcactatggacgggatcggagaagaaattgctgatgaggtct 1562 Query: 304 tggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcangatgtagtcg 363 || || | || |||| |||||| || |||||||| || || ||||||| |||||||||| Sbjct: 1561 tgattaactggagcattcttgtcaacagtcacaaaagcttgttgggtcaagatgtagtcg 1502 Query: 364 aagcggggcgcccacttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatg 423 ||||| |||||||| ||||| || |||| |||||| || || |||||||| || |||||| Sbjct: 1501 aagcgtggcgcccatttccttgatcccaaccgggctgttgtggagcagttatcaaccatg 1442 Query: 424 aaggccaccccacgcgcgtgcatgaacgggttcagcgagtccactgactcgatcacgctc 483 |||||||||||||| ||||||||||| |||||||| || ||||| |||||||||| ||| Sbjct: 1441 aaggccaccccacgagcgtgcatgaatgggttcagggaatccacagactcgatcaaactc 1382 Query: 484 tcgttgatgatctcagagtaggagtgacccttcttcctcagcacctcgatctgggccatc 543 |||||||||||||| ||||| ||||| |||||||| || || || || ||||| |||||| Sbjct: 1381 tcgttgatgatctccgagtaagagtggcccttctttctaaggacttcaatctgtgccatc 1322 Query: 544 ataagtgcaacgtaaactcc 563 ||||||||||| || ||||| Sbjct: 1321 ataagtgcaacatacactcc 1302
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 216 bits (109), Expect = 6e-53 Identities = 278/335 (82%) Strand = Plus / Minus Query: 184 agctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagc 243 ||||| |||||||| ||||| ||||| || | ||| || ||||| ||||||||||||| | Sbjct: 26389122 agctctggacgcacaaagtctgcatcagcaggcactgaaatgtcaacggtgggcctcaac 26389063 Query: 244 tcggcgcanacctcgatggcgccgtggacggggtccgacatgaagttgctgatgaggtcc 303 | || || || || ||||| | |||||||| || || | ||| |||||||||||||| Sbjct: 26389062 tgagcacagacttcaatggcactatggacgggatcggagaagaaattgctgatgaggtct 26389003 Query: 304 tggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcangatgtagtcg 363 || || | || |||| |||||| || |||||||| || || ||||||| |||||||||| Sbjct: 26389002 tgattaactggagcattcttgtcaacagtcacaaaagcttgttgggtcaagatgtagtcg 26388943 Query: 364 aagcggggcgcccacttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatg 423 ||||| |||||||| ||||| || |||| |||||| || || |||||||| || |||||| Sbjct: 26388942 aagcgtggcgcccatttccttgatcccaaccgggctgttgtggagcagttatcaaccatg 26388883 Query: 424 aaggccaccccacgcgcgtgcatgaacgggttcagcgagtccactgactcgatcacgctc 483 |||||||||||||| ||||||||||| |||||||| || ||||| |||||||||| ||| Sbjct: 26388882 aaggccaccccacgagcgtgcatgaatgggttcagggaatccacagactcgatcaaactc 26388823 Query: 484 tcgttgatgatctcagagtaggagtgacccttctt 518 |||||||||||||| ||||| ||||| |||||||| Sbjct: 26388822 tcgttgatgatctccgagtaagagtggcccttctt 26388788
>dbj|AP003710.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0032K15 Length = 126195 Score = 216 bits (109), Expect = 6e-53 Identities = 278/335 (82%) Strand = Plus / Minus Query: 184 agctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagc 243 ||||| |||||||| ||||| ||||| || | ||| || ||||| ||||||||||||| | Sbjct: 62987 agctctggacgcacaaagtctgcatcagcaggcactgaaatgtcaacggtgggcctcaac 62928 Query: 244 tcggcgcanacctcgatggcgccgtggacggggtccgacatgaagttgctgatgaggtcc 303 | || || || || ||||| | |||||||| || || | ||| |||||||||||||| Sbjct: 62927 tgagcacagacttcaatggcactatggacgggatcggagaagaaattgctgatgaggtct 62868 Query: 304 tggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcangatgtagtcg 363 || || | || |||| |||||| || |||||||| || || ||||||| |||||||||| Sbjct: 62867 tgattaactggagcattcttgtcaacagtcacaaaagcttgttgggtcaagatgtagtcg 62808 Query: 364 aagcggggcgcccacttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatg 423 ||||| |||||||| ||||| || |||| |||||| || || |||||||| || |||||| Sbjct: 62807 aagcgtggcgcccatttccttgatcccaaccgggctgttgtggagcagttatcaaccatg 62748 Query: 424 aaggccaccccacgcgcgtgcatgaacgggttcagcgagtccactgactcgatcacgctc 483 |||||||||||||| ||||||||||| |||||||| || ||||| |||||||||| ||| Sbjct: 62747 aaggccaccccacgagcgtgcatgaatgggttcagggaatccacagactcgatcaaactc 62688 Query: 484 tcgttgatgatctcagagtaggagtgacccttctt 518 |||||||||||||| ||||| ||||| |||||||| Sbjct: 62687 tcgttgatgatctccgagtaagagtggcccttctt 62653
>ref|NM_115723.2| Arabidopsis thaliana ketol-acid reductoisomerase AT3G58610 mRNA, complete cds Length = 2087 Score = 133 bits (67), Expect = 7e-28 Identities = 180/218 (82%) Strand = Plus / Minus Query: 346 tgggtcangatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 405 ||||||| ||||||||| || || |||||||| |||||||| |||| | || || || Sbjct: 1704 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 1645 Query: 406 gagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtcc 465 ||||||||||| |||||||||| ||| || | |||||||| || ||||| || |||||| Sbjct: 1644 gagcagttgtcaaccatgaaggacactcccctggcgtgcataaatgggtttagagagtcc 1585 Query: 466 actgactcgatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagc 525 || || || ||||| |||||||||||||| || ||||| |||||||| |||||||||| Sbjct: 1584 acggattcaatcacactctcgttgatgatttctgagtaagagtgacctttcttcctcaag 1525 Query: 526 acctcgatctgggccatcataagtgcaacgtaaactcc 563 | ||| ||||| |||||||||||||| || |||||||| Sbjct: 1524 atctcaatctgagccatcataagtgctacataaactcc 1487
>gb|BT000822.1| Arabidopsis thaliana ketol-acid reductoisomerase (At3g58610/F14P22_200) mRNA, complete cds Length = 1776 Score = 133 bits (67), Expect = 7e-28 Identities = 180/218 (82%) Strand = Plus / Minus Query: 346 tgggtcangatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 405 ||||||| ||||||||| || || |||||||| |||||||| |||| | || || || Sbjct: 1595 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 1536 Query: 406 gagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtcc 465 ||||||||||| |||||||||| ||| || | |||||||| || ||||| || |||||| Sbjct: 1535 gagcagttgtcaaccatgaaggacactcccctggcgtgcataaatgggtttagagagtcc 1476 Query: 466 actgactcgatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagc 525 || || || ||||| |||||||||||||| || ||||| |||||||| |||||||||| Sbjct: 1475 acggattcaatcacactctcgttgatgatttctgagtaagagtgacctttcttcctcaag 1416 Query: 526 acctcgatctgggccatcataagtgcaacgtaaactcc 563 | ||| ||||| |||||||||||||| || |||||||| Sbjct: 1415 atctcaatctgagccatcataagtgctacataaactcc 1378
>gb|BT000669.1| Arabidopsis thaliana clone RAFL07-09-M16 (R10765) putative ketol-acid reductoisomerase (At3g58610) mRNA, complete cds Length = 2028 Score = 133 bits (67), Expect = 7e-28 Identities = 180/218 (82%) Strand = Plus / Minus Query: 346 tgggtcangatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 405 ||||||| ||||||||| || || |||||||| |||||||| |||| | || || || Sbjct: 1645 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 1586 Query: 406 gagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtcc 465 ||||||||||| |||||||||| ||| || | |||||||| || ||||| || |||||| Sbjct: 1585 gagcagttgtcaaccatgaaggacactcccctggcgtgcataaatgggtttagagagtcc 1526 Query: 466 actgactcgatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagc 525 || || || ||||| |||||||||||||| || ||||| |||||||| |||||||||| Sbjct: 1525 acggattcaatcacactctcgttgatgatttctgagtaagagtgacctttcttcctcaag 1466 Query: 526 acctcgatctgggccatcataagtgcaacgtaaactcc 563 | ||| ||||| |||||||||||||| || |||||||| Sbjct: 1465 atctcaatctgagccatcataagtgctacataaactcc 1428
>gb|AY096556.1| Arabidopsis thaliana putative ketol-acid reductoisomerase (At3g58610) mRNA, complete cds Length = 1807 Score = 133 bits (67), Expect = 7e-28 Identities = 180/218 (82%) Strand = Plus / Minus Query: 346 tgggtcangatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 405 ||||||| ||||||||| || || |||||||| |||||||| |||| | || || || Sbjct: 1595 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 1536 Query: 406 gagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtcc 465 ||||||||||| |||||||||| ||| || | |||||||| || ||||| || |||||| Sbjct: 1535 gagcagttgtcaaccatgaaggacactcccctggcgtgcataaatgggtttagagagtcc 1476 Query: 466 actgactcgatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagc 525 || || || ||||| |||||||||||||| || ||||| |||||||| |||||||||| Sbjct: 1475 acggattcaatcacactctcgttgatgatttctgagtaagagtgacctttcttcctcaag 1416 Query: 526 acctcgatctgggccatcataagtgcaacgtaaactcc 563 | ||| ||||| |||||||||||||| || |||||||| Sbjct: 1415 atctcaatctgagccatcataagtgctacataaactcc 1378
>gb|AY065398.1| Arabidopsis thaliana putative ketol-acid reductoisomerase (At3g58610) mRNA, complete cds Length = 2058 Score = 133 bits (67), Expect = 7e-28 Identities = 180/218 (82%) Strand = Plus / Minus Query: 346 tgggtcangatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 405 ||||||| ||||||||| || || |||||||| |||||||| |||| | || || || Sbjct: 1704 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 1645 Query: 406 gagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtcc 465 ||||||||||| |||||||||| ||| || | |||||||| || ||||| || |||||| Sbjct: 1644 gagcagttgtcaaccatgaaggacactcccctggcgtgcataaatgggtttagagagtcc 1585 Query: 466 actgactcgatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagc 525 || || || ||||| |||||||||||||| || ||||| |||||||| |||||||||| Sbjct: 1584 acggattcaatcacactctcgttgatgatttctgagtaagagtgacctttcttcctcaag 1525 Query: 526 acctcgatctgggccatcataagtgcaacgtaaactcc 563 | ||| ||||| |||||||||||||| || |||||||| Sbjct: 1524 atctcaatctgagccatcataagtgctacataaactcc 1487
>emb|X68150.1|ATKARE A.thaliana mRNA for ketol-acid reductoisomerase subunit Length = 1966 Score = 133 bits (67), Expect = 7e-28 Identities = 180/218 (82%) Strand = Plus / Minus Query: 346 tgggtcangatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 405 ||||||| ||||||||| || || |||||||| |||||||| |||| | || || || Sbjct: 1619 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 1560 Query: 406 gagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtcc 465 ||||||||||| |||||||||| ||| || | |||||||| || ||||| || |||||| Sbjct: 1559 gagcagttgtcaaccatgaaggacactcccctggcgtgcataaatgggtttagagagtcc 1500 Query: 466 actgactcgatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagc 525 || || || ||||| |||||||||||||| || ||||| |||||||| |||||||||| Sbjct: 1499 acggattcaatcacactctcgttgatgatttctgagtaagagtgacctttcttcctcaag 1440 Query: 526 acctcgatctgggccatcataagtgcaacgtaaactcc 563 | ||| ||||| |||||||||||||| || |||||||| Sbjct: 1439 atctcaatctgagccatcataagtgctacataaactcc 1402
>gb|AF329500.1| Arabidopsis thaliana putative ketol-acid reductoisomerase (At3g58610) mRNA, complete cds Length = 1996 Score = 133 bits (67), Expect = 7e-28 Identities = 180/218 (82%) Strand = Plus / Minus Query: 346 tgggtcangatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 405 ||||||| ||||||||| || || |||||||| |||||||| |||| | || || || Sbjct: 1641 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 1582 Query: 406 gagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtcc 465 ||||||||||| |||||||||| ||| || | |||||||| || ||||| || |||||| Sbjct: 1581 gagcagttgtcaaccatgaaggacactcccctggcgtgcataaatgggtttagagagtcc 1522 Query: 466 actgactcgatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagc 525 || || || ||||| |||||||||||||| || ||||| |||||||| |||||||||| Sbjct: 1521 acggattcaatcacactctcgttgatgatttctgagtaagagtgacctttcttcctcaag 1462 Query: 526 acctcgatctgggccatcataagtgcaacgtaaactcc 563 | ||| ||||| |||||||||||||| || |||||||| Sbjct: 1461 atctcaatctgagccatcataagtgctacataaactcc 1424
>gb|AY062094.1| Arabidopsis thaliana AT3g58610/F14P22_200 mRNA, complete cds Length = 1990 Score = 133 bits (67), Expect = 7e-28 Identities = 180/218 (82%) Strand = Plus / Minus Query: 346 tgggtcangatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 405 ||||||| ||||||||| || || |||||||| |||||||| |||| | || || || Sbjct: 1639 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 1580 Query: 406 gagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtcc 465 ||||||||||| |||||||||| ||| || | |||||||| || ||||| || |||||| Sbjct: 1579 gagcagttgtcaaccatgaaggacactcccctggcgtgcataaatgggtttagagagtcc 1520 Query: 466 actgactcgatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagc 525 || || || ||||| |||||||||||||| || ||||| |||||||| |||||||||| Sbjct: 1519 acggattcaatcacactctcgttgatgatttctgagtaagagtgacctttcttcctcaag 1460 Query: 526 acctcgatctgggccatcataagtgcaacgtaaactcc 563 | ||| ||||| |||||||||||||| || |||||||| Sbjct: 1459 atctcaatctgagccatcataagtgctacataaactcc 1422
>dbj|AK221938.1| Arabidopsis thaliana mRNA for ketol-acid reductoisomerase, complete cds, clone: RAFL22-45-C07 Length = 1266 Score = 133 bits (67), Expect = 7e-28 Identities = 180/218 (82%) Strand = Plus / Minus Query: 346 tgggtcangatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 405 ||||||| ||||||||| || || |||||||| |||||||| |||| | || || || Sbjct: 917 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 858 Query: 406 gagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtcc 465 ||||||||||| |||||||||| ||| || | |||||||| || ||||| || |||||| Sbjct: 857 gagcagttgtcaaccatgaaggacactcccctggcgtgcataaatgggtttagagagtcc 798 Query: 466 actgactcgatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagc 525 || || || ||||| |||||||||||||| || ||||| |||||||| |||||||||| Sbjct: 797 acggattcaatcacactctcgttgatgatttctgagtaagagtgacctttcttcctcaag 738 Query: 526 acctcgatctgggccatcataagtgcaacgtaaactcc 563 | ||| ||||| |||||||||||||| || |||||||| Sbjct: 737 atctcaatctgagccatcataagtgctacataaactcc 700
>gb|AF324671.2|AF324671 Arabidopsis thaliana AT3g58610 (AT3g58610/F14P22_200) mRNA, complete cds Length = 1980 Score = 133 bits (67), Expect = 7e-28 Identities = 180/218 (82%) Strand = Plus / Minus Query: 346 tgggtcangatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 405 ||||||| ||||||||| || || |||||||| |||||||| |||| | || || || Sbjct: 1641 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 1582 Query: 406 gagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtcc 465 ||||||||||| |||||||||| ||| || | |||||||| || ||||| || |||||| Sbjct: 1581 gagcagttgtcaaccatgaaggacactcccctggcgtgcataaatgggtttagagagtcc 1522 Query: 466 actgactcgatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagc 525 || || || ||||| |||||||||||||| || ||||| |||||||| |||||||||| Sbjct: 1521 acggattcaatcacactctcgttgatgatttctgagtaagagtgacctttcttcctcaag 1462 Query: 526 acctcgatctgggccatcataagtgcaacgtaaactcc 563 | ||| ||||| |||||||||||||| || |||||||| Sbjct: 1461 atctcaatctgagccatcataagtgctacataaactcc 1424
>emb|BX823796.1|CNS0A4R1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS76ZD11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1983 Score = 117 bits (59), Expect = 4e-23 Identities = 178/218 (81%) Strand = Plus / Minus Query: 346 tgggtcangatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 405 ||||||| ||||||||| || || |||||||| |||||||| |||| | || || || Sbjct: 1656 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 1597 Query: 406 gagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtcc 465 ||||||||||| |||||||||| ||| || |||||||| | ||||| || |||||| Sbjct: 1596 gagcagttgtcaaccatgaaggacactcccgtggcgtgcataagtgggtttagagagtcc 1537 Query: 466 actgactcgatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagc 525 || || || ||||| |||||||||||||| || ||||| |||||||| |||||||||| Sbjct: 1536 acggattcaatcacactctcgttgatgatttctgagtaagagtgacctttcttcctcaag 1477 Query: 526 acctcgatctgggccatcataagtgcaacgtaaactcc 563 | ||| ||||| |||||||||||||| || |||||||| Sbjct: 1476 atctcaatctgagccatcataagtgctacataaactcc 1439
>emb|Y17796.1|PSY17796 Pisum sativum mRNA for ketol-acid reductoisomerase Length = 2036 Score = 111 bits (56), Expect = 3e-21 Identities = 229/287 (79%) Strand = Plus / Minus Query: 259 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 318 ||||| ||||| || ||||| |||| |||||||||||| ||||||||||||||||| || Sbjct: 1658 atggccccgtgcactgggtctgacacgaagttgctgatcaggtcctggttgatgggagct 1599 Query: 319 tccttgtccaccgtcacaaacgcctgctgggtcangatgtagtcgaagcggggcgcccac 378 | ||||||| | ||| || |||||||| || | ||||| || || | ||| ||||| Sbjct: 1598 ccactgtccactgccaccaaggcctgctgagttagaatgtaatcaaatctgggagcccat 1539 Query: 379 ttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccaccccacgc 438 ||||| || |||| || || || || ||||||||||| |||||||| | || || || Sbjct: 1538 ttccttgaacccaaccttgctgtggttgagcagttgtcaaccatgaaagaaacaccgcga 1479 Query: 439 gcgtgcatgaacgggttcagcgagtccactgactcgatcacgctctcgttgatgatctca 498 || |||||||| || |||| || || || ||||||||||| ||||| || ||||| ||| Sbjct: 1478 gcatgcatgaatggattcaaagaatcaacagactcgatcacactctcattaatgatttca 1419 Query: 499 gagtaggagtgacccttcttcctcagcacctcgatctgggccatcat 545 ||||| || || ||||||||||||| ||||| |||||||||||||| Sbjct: 1418 gagtaagaatgccccttcttcctcaagacctcaatctgggccatcat 1372
>emb|X69880.1|ATAAI A.thaliana gene for acetohydroxy acid isomeroreductase Length = 4395 Score = 109 bits (55), Expect = 1e-20 Identities = 147/178 (82%) Strand = Plus / Minus Query: 346 tgggtcangatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 405 ||||||| ||||||||| || || |||||||| |||||||| |||| | || || || Sbjct: 3980 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 3921 Query: 406 gagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtcc 465 ||||||||||| |||||||||| ||| || | |||||||| || ||||| || |||||| Sbjct: 3920 gagcagttgtcaaccatgaaggacactcccctggcgtgcataaatgggtttagagagtcc 3861 Query: 466 actgactcgatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctca 523 || || || ||||| |||||||||||||| || ||||| |||||||| |||||||||| Sbjct: 3860 acggattcaatcacactctcgttgatgatttctgagtaagagtgacctttcttcctca 3803
>emb|AL137082.1|ATF14P22 Arabidopsis thaliana DNA chromosome 3, BAC clone F14P22 Length = 94239 Score = 109 bits (55), Expect = 1e-20 Identities = 147/178 (82%) Strand = Plus / Minus Query: 346 tgggtcangatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtc 405 ||||||| ||||||||| || || |||||||| |||||||| |||| | || || || Sbjct: 67959 tgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgctgtggtt 67900 Query: 406 gagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtcc 465 ||||||||||| |||||||||| ||| || | |||||||| || ||||| || |||||| Sbjct: 67899 gagcagttgtcaaccatgaaggacactcccctggcgtgcataaatgggtttagagagtcc 67840 Query: 466 actgactcgatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctca 523 || || || ||||| |||||||||||||| || ||||| |||||||| |||||||||| Sbjct: 67839 acggattcaatcacactctcgttgatgatttctgagtaagagtgacctttcttcctca 67782
>gb|AY702346.1| Phytophthora infestans ketol-acid reductoisomerase mRNA, partial cds Length = 1257 Score = 109 bits (55), Expect = 1e-20 Identities = 114/134 (85%) Strand = Plus / Minus Query: 340 gcctgctgggtcangatgtagtcgaagcggggcgcccacttcctcgaccccagccgggcc 399 ||||||| |||| ||||||||||||||| || |||||||| | || ||||| || || Sbjct: 1130 gcctgctccgtcaggatgtagtcgaagcgaggagcccacttacgggagcccagacgagcg 1071 Query: 400 gtcgtcgagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagc 459 ||||| |||||||||||||||||| |||| || || || ||||||||| ||||||||||| Sbjct: 1070 gtcgtggagcagttgtccaccatgtaggcgacgccgcgagcgtgcatgtacgggttcagc 1011 Query: 460 gagtccactgactc 473 |||||||| ||||| Sbjct: 1010 gagtccacagactc 997
>emb|X57073.1|SOAHRI S.oleracea AHRI mRNA for acetohydroxy acid reductoisomerase Length = 2050 Score = 97.6 bits (49), Expect = 4e-17 Identities = 97/113 (85%) Strand = Plus / Minus Query: 442 tgcatgaacgggttcagcgagtccactgactcgatcacgctctcgttgatgatctcagag 501 |||||||| ||||||| || ||||||| || ||||| ||||||||||||||||| ||| Sbjct: 1545 tgcatgaaggggttcaaggaatccactgcttcaatcacactctcgttgatgatctccgag 1486 Query: 502 taggagtgacccttcttcctcagcacctcgatctgggccatcataagtgcaac 554 || ||||||||||||||||||| | ||| |||||||||||||| || ||||| Sbjct: 1485 tacgagtgacccttcttcctcaagatctctatctgggccatcattagagcaac 1433
>emb|AJ251333.1|PSA251333 Pisum sativum aair gene for acetohydroxy acid isomeroreductase, exons 1-9 Length = 3343 Score = 95.6 bits (48), Expect = 1e-16 Identities = 221/279 (79%) Strand = Plus / Minus Query: 259 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 318 ||||| ||||| || ||||| |||| |||||||||||| ||||||||||||||||| || Sbjct: 3013 atggccccgtgcactgggtctgacacgaagttgctgatcaggtcctggttgatgggagct 2954 Query: 319 tccttgtccaccgtcacaaacgcctgctgggtcangatgtagtcgaagcggggcgcccac 378 | ||||||| | ||| || |||||||| || | ||||| || || | ||| ||||| Sbjct: 2953 ccactgtccactgccaccaaggcctgctgagttagaatgtaatcaaatctgggagcccat 2894 Query: 379 ttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccaccccacgc 438 ||||| || |||| || || || || ||||||||||| |||||||| | || || || Sbjct: 2893 ttccttgaacccaaccttgctgtggttgagcagttgtcaaccatgaaagaaacaccgcga 2834 Query: 439 gcgtgcatgaacgggttcagcgagtccactgactcgatcacgctctcgttgatgatctca 498 || |||||||| || |||| || || || ||||||||||| ||||| || ||||| ||| Sbjct: 2833 gcatgcatgaatggattcaaagaatcaacagactcgatcacactctcattaatgatttca 2774 Query: 499 gagtaggagtgacccttcttcctcagcacctcgatctgg 537 ||||| || || ||||||||||||| ||||| |||||| Sbjct: 2773 gagtaagaatgccccttcttcctcaagacctcaatctgg 2735
>gb|AC135231.23| Medicago truncatula clone mth2-28m10, complete sequence Length = 106771 Score = 75.8 bits (38), Expect = 1e-10 Identities = 208/265 (78%) Strand = Plus / Plus Query: 259 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 318 ||||| ||||| || ||||| ||||||||||||||||| | |||||||||||| || || Sbjct: 73387 atggctccgtgcactgggtctgacatgaagttgctgattaagtcctggttgataggagct 73446 Query: 319 tccttgtccaccgtcacaaacgcctgctgggtcangatgtagtcgaagcggggcgcccac 378 | |||||||| | ||| || |||||||| || | ||| || || || | ||| ||||| Sbjct: 73447 ccattgtccactgccaccaaagcctgctgagttaggatataatcaaatctgggggcccat 73506 Query: 379 ttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccaccccacgc 438 ||||| || || | || || || || ||||||||||| |||||||| | || || || Sbjct: 73507 ttccttgaacctaaccttgctgtggttgagcagttgtcaaccatgaaagaaacaccccga 73566 Query: 439 gcgtgcatgaacgggttcagcgagtccactgactcgatcacgctctcgttgatgatctca 498 || |||||||| || |||| || || ||||| |||||||| ||||| || ||||| ||| Sbjct: 73567 gcatgcatgaatggattcaaagaatcaactgattcgatcacactctcattaatgatttca 73626 Query: 499 gagtaggagtgacccttcttcctca 523 ||||| || || || |||||||||| Sbjct: 73627 gagtaagaatgtcctttcttcctca 73651
>gb|DQ448854.1| Theobroma cacao putative ketol acid reductoisomerase precursor-like protein, mRNA, partial sequence Length = 258 Score = 42.1 bits (21), Expect = 1.9 Identities = 47/56 (83%) Strand = Plus / Minus Query: 259 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatggg 314 ||||| ||||| || ||||| |||| |||||||||||| | || ||||||||||| Sbjct: 169 atggcaccgtgcaccgggtctgacaggaagttgctgatcngatcttggttgatggg 114
>gb|AC136921.8| Mus musculus chromosome 17, clone RP23-210D4, complete sequence Length = 244237 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 285 gaagttgctgatgaggtcctg 305 ||||||||||||||||||||| Sbjct: 46822 gaagttgctgatgaggtcctg 46842
>gb|AC129095.12| Mus musculus strain C57BL/6J clone rp23-360g16 map 17, complete sequence Length = 209946 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 285 gaagttgctgatgaggtcctg 305 ||||||||||||||||||||| Sbjct: 107699 gaagttgctgatgaggtcctg 107719
>gb|AC027251.6| Homo sapiens chromosome 8, clone RP11-14G5, complete sequence Length = 130377 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 506 agtgacccttcttcctcagcacctc 530 ||||| ||||||||||||||||||| Sbjct: 36169 agtgatccttcttcctcagcacctc 36193
>dbj|AK035823.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:9630008E23 product:mitogen activated protein kinase kinase kinase 4, full insert sequence Length = 3816 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 285 gaagttgctgatgaggtcctg 305 ||||||||||||||||||||| Sbjct: 2783 gaagttgctgatgaggtcctg 2803
>gb|AC153999.7| Mus musculus 6 BAC RP24-395E8 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 188196 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 506 agtgacccttcttcctcagca 526 ||||||||||||||||||||| Sbjct: 36870 agtgacccttcttcctcagca 36850
>emb|BX119963.5| Zebrafish DNA sequence from clone DKEY-6A5 in linkage group 4, complete sequence Length = 229125 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 acacagcagctcacaggttcaaaca 97 ||||||||||||||||||| ||||| Sbjct: 144182 acacagcagctcacaggtttaaaca 144158
>gb|AC087901.20| Mus musculus strain C57BL/6J chromosome 17 clone rp23-22l23, complete sequence Length = 214372 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 285 gaagttgctgatgaggtcctg 305 ||||||||||||||||||||| Sbjct: 151591 gaagttgctgatgaggtcctg 151611
>gb|AC154000.4| Mus musculus 6 BAC RP24-313C5 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 198580 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 506 agtgacccttcttcctcagca 526 ||||||||||||||||||||| Sbjct: 39352 agtgacccttcttcctcagca 39372
>ref|XM_428106.1| PREDICTED: Gallus gallus similar to hypothetical protein LOC255104 (LOC430549), partial mRNA Length = 561 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 ctgacacagcagctcacagg 89 |||||||||||||||||||| Sbjct: 279 ctgacacagcagctcacagg 298
>emb|CR376778.9| Zebrafish DNA sequence from clone DKEYP-94F12 in linkage group 25, complete sequence Length = 185814 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 tttattatttgagaagaaac 23 |||||||||||||||||||| Sbjct: 122125 tttattatttgagaagaaac 122106
>ref|XM_789042.1| PREDICTED: Strongylocentrotus purpuratus similar to Forkhead box protein F1 (Forkhead-related protein FKHL5) (Forkhead-related transcription factor 1) (FREAC-1) (Forkhead-related activator-1) (LOC589400), mRNA Length = 1248 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 catgaagttgctgatgaggt 301 |||||||||||||||||||| Sbjct: 206 catgaagttgctgatgaggt 187
>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29 Length = 303550 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 386 accccagccgggccgtcgtcgagc 409 ||||| |||||||||||||||||| Sbjct: 24366 acccccgccgggccgtcgtcgagc 24343
>gb|AY007310.1| Coturnix coturnix target of Jun 3 (TOJ3) mRNA, complete cds Length = 1772 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 tgatgaggtcctggttgatg 312 |||||||||||||||||||| Sbjct: 1575 tgatgaggtcctggttgatg 1556
>gb|AC138666.6| Mus musculus chromosome 5, clone RP24-140D11, complete sequence Length = 209938 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 506 agtgacccttcttcctcagc 525 |||||||||||||||||||| Sbjct: 145642 agtgacccttcttcctcagc 145661
>emb|CR762419.14| Zebrafish DNA sequence from clone CH211-247A18 in linkage group 12, complete sequence Length = 152153 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 ttttattatttgagaagaaa 22 |||||||||||||||||||| Sbjct: 70814 ttttattatttgagaagaaa 70833
>gb|AC123917.25| Mus musculus chromosome 15, clone RP23-281P5, complete sequence Length = 184959 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 acacagcagctcacaggttcaaac 96 |||||||||| ||||||||||||| Sbjct: 108353 acacagcagcacacaggttcaaac 108376 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,881,782 Number of Sequences: 3902068 Number of extensions: 3881782 Number of successful extensions: 70071 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 48 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 69948 Number of HSP's gapped (non-prelim): 116 length of query: 563 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 540 effective length of database: 17,143,297,704 effective search space: 9257380760160 effective search space used: 9257380760160 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)