ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd16l17 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 321 bits (162), Expect = 1e-84 Identities = 240/266 (90%) Strand = Plus / Minus Query: 230 ctagtaggcgacgatcctgagcccgaggctcctctgcgcgtactcgatgaggccgtccac 289 ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct: 17284264 ctagtaggcgacgatcctgaggccgaggctcttctgcgcgtactcgatgaggccgtccac 17284205 Query: 290 ctcgccgtcgtcgacgtagccgtcgccgtcggtgtcggcgtactcgatgccacgcttgct 349 |||||||||||||| ||||||||||||||| | ||||||||| |||||| || |||| Sbjct: 17284204 ctcgccgtcgtcgatgtagccgtcgccgtccgcgtcggcgtagctgatgccctgcctgct 17284145 Query: 350 cttgtaccccgagaagcgcgtccggatggtgcgcatcgcgcaccgcagctcgtcgcggct 409 | | |||||| ||| |||| |||||||| ||||||||||| |||||||||||||||||| Sbjct: 17284144 cctccaccccgtgaaccgcgcccggatggcgcgcatcgcgcgccgcagctcgtcgcggct 17284085 Query: 410 gatgcggccgtcgcggtccacgtcgaaccgccggagccactccttgaactcgtccaccgt 469 |||||| ||||||||||| || |||||||||| |||||||||||||||||||||||||| Sbjct: 17284084 gatgcgcccgtcgcggtcgacatcgaaccgcctcagccactccttgaactcgtccaccgt 17284025 Query: 470 catgtccccgtccagcgaccgcgtcg 495 |||||| |||||||| |||||||||| Sbjct: 17284024 catgtcgccgtccagagaccgcgtcg 17283999 Score = 87.7 bits (44), Expect = 4e-14 Identities = 71/80 (88%) Strand = Plus / Minus Query: 380 gcgcatcgcgcaccgcagctcgtcgcggctgatgcggccgtcgcggtccacgtcgaaccg 439 |||||| |||| ||||||||||||||||||||||||||||||| ||| ||||||| | Sbjct: 17278330 gcgcatggcgcggcgcagctcgtcgcggctgatgcggccgtcgccgtcggtgtcgaactg 17278271 Query: 440 ccggagccactccttgaact 459 ||||| |||||||||||||| Sbjct: 17278270 ccggatccactccttgaact 17278251 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Minus Query: 269 gtactcgatgaggccgtccacctcgccgtcgtcgacgtagccgtcgccgtcggtgtcggc 328 |||||||||||||||||| | ||||| |||||||| ||||||||||||||| | |||||| Sbjct: 17278441 gtactcgatgaggccgtcgatctcgctgtcgtcgatgtagccgtcgccgtccgcgtcggc 17278382 Query: 329 gt 330 || Sbjct: 17278381 gt 17278380 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Minus Query: 281 gccgtccacctcgccgtcgtcgacgtagccgtcgccg 317 |||||||||||||||| || ||||| |||||||||| Sbjct: 19797093 gccgtccacctcgccgccgacgacgccgccgtcgccg 19797057 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 295 cgtcgtcgacgtagccgtcgccgtcggtgtcg 326 |||||||| ||| ||||||||||||| ||||| Sbjct: 5704760 cgtcgtcgccgtcgccgtcgccgtcgctgtcg 5704729
>dbj|AP005891.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1045B05 Length = 140992 Score = 321 bits (162), Expect = 1e-84 Identities = 240/266 (90%) Strand = Plus / Minus Query: 230 ctagtaggcgacgatcctgagcccgaggctcctctgcgcgtactcgatgaggccgtccac 289 ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct: 71136 ctagtaggcgacgatcctgaggccgaggctcttctgcgcgtactcgatgaggccgtccac 71077 Query: 290 ctcgccgtcgtcgacgtagccgtcgccgtcggtgtcggcgtactcgatgccacgcttgct 349 |||||||||||||| ||||||||||||||| | ||||||||| |||||| || |||| Sbjct: 71076 ctcgccgtcgtcgatgtagccgtcgccgtccgcgtcggcgtagctgatgccctgcctgct 71017 Query: 350 cttgtaccccgagaagcgcgtccggatggtgcgcatcgcgcaccgcagctcgtcgcggct 409 | | |||||| ||| |||| |||||||| ||||||||||| |||||||||||||||||| Sbjct: 71016 cctccaccccgtgaaccgcgcccggatggcgcgcatcgcgcgccgcagctcgtcgcggct 70957 Query: 410 gatgcggccgtcgcggtccacgtcgaaccgccggagccactccttgaactcgtccaccgt 469 |||||| ||||||||||| || |||||||||| |||||||||||||||||||||||||| Sbjct: 70956 gatgcgcccgtcgcggtcgacatcgaaccgcctcagccactccttgaactcgtccaccgt 70897 Query: 470 catgtccccgtccagcgaccgcgtcg 495 |||||| |||||||| |||||||||| Sbjct: 70896 catgtcgccgtccagagaccgcgtcg 70871 Score = 87.7 bits (44), Expect = 4e-14 Identities = 71/80 (88%) Strand = Plus / Minus Query: 380 gcgcatcgcgcaccgcagctcgtcgcggctgatgcggccgtcgcggtccacgtcgaaccg 439 |||||| |||| ||||||||||||||||||||||||||||||| ||| ||||||| | Sbjct: 65202 gcgcatggcgcggcgcagctcgtcgcggctgatgcggccgtcgccgtcggtgtcgaactg 65143 Query: 440 ccggagccactccttgaact 459 ||||| |||||||||||||| Sbjct: 65142 ccggatccactccttgaact 65123 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Minus Query: 269 gtactcgatgaggccgtccacctcgccgtcgtcgacgtagccgtcgccgtcggtgtcggc 328 |||||||||||||||||| | ||||| |||||||| ||||||||||||||| | |||||| Sbjct: 65313 gtactcgatgaggccgtcgatctcgctgtcgtcgatgtagccgtcgccgtccgcgtcggc 65254 Query: 329 gt 330 || Sbjct: 65253 gt 65252
>dbj|AP006849.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0054F02 Length = 180651 Score = 321 bits (162), Expect = 1e-84 Identities = 240/266 (90%) Strand = Plus / Minus Query: 230 ctagtaggcgacgatcctgagcccgaggctcctctgcgcgtactcgatgaggccgtccac 289 ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct: 8177 ctagtaggcgacgatcctgaggccgaggctcttctgcgcgtactcgatgaggccgtccac 8118 Query: 290 ctcgccgtcgtcgacgtagccgtcgccgtcggtgtcggcgtactcgatgccacgcttgct 349 |||||||||||||| ||||||||||||||| | ||||||||| |||||| || |||| Sbjct: 8117 ctcgccgtcgtcgatgtagccgtcgccgtccgcgtcggcgtagctgatgccctgcctgct 8058 Query: 350 cttgtaccccgagaagcgcgtccggatggtgcgcatcgcgcaccgcagctcgtcgcggct 409 | | |||||| ||| |||| |||||||| ||||||||||| |||||||||||||||||| Sbjct: 8057 cctccaccccgtgaaccgcgcccggatggcgcgcatcgcgcgccgcagctcgtcgcggct 7998 Query: 410 gatgcggccgtcgcggtccacgtcgaaccgccggagccactccttgaactcgtccaccgt 469 |||||| ||||||||||| || |||||||||| |||||||||||||||||||||||||| Sbjct: 7997 gatgcgcccgtcgcggtcgacatcgaaccgcctcagccactccttgaactcgtccaccgt 7938 Query: 470 catgtccccgtccagcgaccgcgtcg 495 |||||| |||||||| |||||||||| Sbjct: 7937 catgtcgccgtccagagaccgcgtcg 7912 Score = 87.7 bits (44), Expect = 4e-14 Identities = 71/80 (88%) Strand = Plus / Minus Query: 380 gcgcatcgcgcaccgcagctcgtcgcggctgatgcggccgtcgcggtccacgtcgaaccg 439 |||||| |||| ||||||||||||||||||||||||||||||| ||| ||||||| | Sbjct: 2243 gcgcatggcgcggcgcagctcgtcgcggctgatgcggccgtcgccgtcggtgtcgaactg 2184 Query: 440 ccggagccactccttgaact 459 ||||| |||||||||||||| Sbjct: 2183 ccggatccactccttgaact 2164 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Minus Query: 269 gtactcgatgaggccgtccacctcgccgtcgtcgacgtagccgtcgccgtcggtgtcggc 328 |||||||||||||||||| | ||||| |||||||| ||||||||||||||| | |||||| Sbjct: 2354 gtactcgatgaggccgtcgatctcgctgtcgtcgatgtagccgtcgccgtccgcgtcggc 2295 Query: 329 gt 330 || Sbjct: 2294 gt 2293
>gb|AY211023.1| Streptomyces violaceoruber strain SANK95570 plasmid pSV2, complete sequence Length = 96742 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 298 cgtcgacgtagccgtcgccgtcggtgtc 325 ||||||||| |||||||||||||||||| Sbjct: 45970 cgtcgacgtcgccgtcgccgtcggtgtc 45997
>ref|XM_472436.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 927 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 294 ccgtcgtcgacgtagccgtcgccgtcg 320 ||||||||||||| ||||||||||||| Sbjct: 10 ccgtcgtcgacgtcgccgtcgccgtcg 36
>gb|AY023921.1| Oryza sativa microsatellite MRG6246 containing (ATCG)X7, closest to marker S13312, genomic sequence Length = 228 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 290 ctcgccgtcgtcgacgtagccgtcgccgtcg 320 ||||||| ||||||||| ||||||||||||| Sbjct: 26 ctcgccgacgtcgacgtcgccgtcgccgtcg 56
>emb|AL606598.3|OSJN00036 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G16, complete sequence Length = 114051 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 294 ccgtcgtcgacgtagccgtcgccgtcg 320 ||||||||||||| ||||||||||||| Sbjct: 67997 ccgtcgtcgacgtcgccgtcgccgtcg 68023
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 294 ccgtcgtcgacgtagccgtcgccgtcg 320 ||||||||||||| ||||||||||||| Sbjct: 20633563 ccgtcgtcgacgtcgccgtcgccgtcg 20633589
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 290 ctcgccgtcgtcgacgtagccgtcgccgtcg 320 ||||||| ||||||||| ||||||||||||| Sbjct: 39164293 ctcgccgacgtcgacgtcgccgtcgccgtcg 39164263 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 308 gccgtcgccgtcggtgtcggc 328 ||||||||||||||||||||| Sbjct: 23806976 gccgtcgccgtcggtgtcggc 23806996 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 308 gccgtcgccgtcggtgtcggc 328 ||||||||||||||||||||| Sbjct: 17577927 gccgtcgccgtcggtgtcggc 17577907 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 310 cgtcgccgtcggtgtcggcgt 330 ||||||||||||||||||||| Sbjct: 7008707 cgtcgccgtcggtgtcggcgt 7008687
>dbj|AP003313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0035F12 Length = 153439 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 290 ctcgccgtcgtcgacgtagccgtcgccgtcg 320 ||||||| ||||||||| ||||||||||||| Sbjct: 40053 ctcgccgacgtcgacgtcgccgtcgccgtcg 40023
>ref|XM_475935.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 522 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 309 ccgtcgccgtcggtgtcggcgt 330 |||||||||||||||||||||| Sbjct: 452 ccgtcgccgtcggtgtcggcgt 431
>gb|AC098571.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1126_B10, complete sequence Length = 127304 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 309 ccgtcgccgtcggtgtcggcgt 330 |||||||||||||||||||||| Sbjct: 65547 ccgtcgccgtcggtgtcggcgt 65568
>emb|AL591785.1|SME591785 Sinorhizobium meliloti 1021 complete chromosome; segment 4/12 Length = 286550 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 491 cgtcgccgccgtcacgttcctg 512 |||||||||||||||||||||| Sbjct: 280904 cgtcgccgccgtcacgttcctg 280925
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 398 ctcgtcgcggctgatgcggccgtcgc 423 |||| ||||||||||||||||||||| Sbjct: 3980153 ctcggcgcggctgatgcggccgtcgc 3980128
>gb|AE012181.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 89 of 460 of the complete genome Length = 10179 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 398 ctcgtcgcggctgatgcggccgtcgc 423 |||| ||||||||||||||||||||| Sbjct: 205 ctcggcgcggctgatgcggccgtcgc 230
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 398 ctcgtcgcggctgatgcggccgtcgc 423 |||| ||||||||||||||||||||| Sbjct: 4069716 ctcggcgcggctgatgcggccgtcgc 4069691
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 307 agccgtcgccgtcggtgtcggc 328 |||||||||||||||||||||| Sbjct: 259865 agccgtcgccgtcggtgtcggc 259886
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 307 agccgtcgccgtcggtgtcggc 328 |||||||||||||||||||||| Sbjct: 244474 agccgtcgccgtcggtgtcggc 244495
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 309 ccgtcgccgtcggtgtcggcgt 330 |||||||||||||||||||||| Sbjct: 28537854 ccgtcgccgtcggtgtcggcgt 28537875 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 305 gtagccgtcgccgtcggtgtcggc 328 ||||||||||||||||| |||||| Sbjct: 18262787 gtagccgtcgccgtcggagtcggc 18262810 Score = 40.1 bits (20), Expect = 7.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 281 gccgtccacctcgccgtcgtcgacgtagccgtcgccgtcg 320 ||||||| ||||| ||||| || ||| ||||||||||||| Sbjct: 3279122 gccgtcctcctcgtcgtcgacgccgtcgccgtcgccgtcg 3279161
>dbj|AK119799.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-175-H08, full insert sequence Length = 741 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 309 ccgtcgccgtcggtgtcggcgt 330 |||||||||||||||||||||| Sbjct: 515 ccgtcgccgtcggtgtcggcgt 494
>emb|AJ234491.1|HVU234491 Hordeum vulgare genomic DNA fragment; clone MWG0533.uni Length = 280 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 482 cagcgaccgcgtcgccgccgtc 503 |||||||||||||||||||||| Sbjct: 178 cagcgaccgcgtcgccgccgtc 199
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 398 ctcgtcgcggctgatgcggccgtcgc 423 |||| ||||||||||||||||||||| Sbjct: 3982446 ctcggcgcggctgatgcggccgtcgc 3982421
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 295 cgtcgtcgacgtagccgtcgccgtcg 320 |||||||||||||||||| ||||||| Sbjct: 745574 cgtcgtcgacgtagccgttgccgtcg 745599
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 307 agccgtcgccgtcggtgtcggc 328 |||||||||||||||||||||| Sbjct: 244474 agccgtcgccgtcggtgtcggc 244495
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 307 agccgtcgccgtcggtgtcggc 328 |||||||||||||||||||||| Sbjct: 259865 agccgtcgccgtcggtgtcggc 259886
>emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa0032J07 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 160673 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 307 agccgtcgccgtcggtgtcggc 328 |||||||||||||||||||||| Sbjct: 60519 agccgtcgccgtcggtgtcggc 60498
>emb|BX000491.1|CNS08CDH Oryza sativa chromosome 12, . BAC OSJNBb0068K19 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 96667 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 307 agccgtcgccgtcggtgtcggc 328 |||||||||||||||||||||| Sbjct: 15391 agccgtcgccgtcggtgtcggc 15370
>ref|NM_188568.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1110 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 310 cgtcgccgtcggtgtcggcgt 330 ||||||||||||||||||||| Sbjct: 556 cgtcgccgtcggtgtcggcgt 536
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 293 gccgtcgtcgacgtagccgtcgccg 317 |||||||||||||||||||| |||| Sbjct: 138259 gccgtcgtcgacgtagccgttgccg 138283
>ref|NM_192671.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 771 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 308 gccgtcgccgtcggtgtcggc 328 ||||||||||||||||||||| Sbjct: 675 gccgtcgccgtcggtgtcggc 655
>ref|XM_463272.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 636 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 308 gccgtcgccgtcggtgtcggc 328 ||||||||||||||||||||| Sbjct: 570 gccgtcgccgtcggtgtcggc 550
>gb|BT016402.1| Zea mays clone Contig235 mRNA sequence Length = 1103 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 409 tgatgcggccgtcgcggtccacgtcgaac 437 ||||||||||||||| |||| |||||||| Sbjct: 474 tgatgcggccgtcgccgtccgcgtcgaac 446
>gb|AC108755.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0028C22, complete sequence Length = 154228 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Minus Query: 281 gccgtccacctcgccgtcgtcgacgtagccgtcgccg 317 |||||||||||||||| || ||||| |||||||||| Sbjct: 124360 gccgtccacctcgccgccgacgacgccgccgtcgccg 124324
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 405 cggctgatgcggccgtcgcggtccacgtc 433 ||||||||||| |||||||||||| |||| Sbjct: 11066905 cggctgatgcgaccgtcgcggtccgcgtc 11066877
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 358 ccgagaagcgcgtccggatggtgcg 382 |||||||||||||| |||||||||| Sbjct: 1144719 ccgagaagcgcgtctggatggtgcg 1144743
>gb|AF461424.2| Oryza sativa chromosome 3 clone OSJNBa0016B07, complete sequence Length = 167588 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 405 cggctgatgcggccgtcgcggtccacgtc 433 ||||||||||| |||||||||||| |||| Sbjct: 66217 cggctgatgcgaccgtcgcggtccgcgtc 66245
>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29 Length = 295150 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 393 cgcagctcgtcgcggctgatg 413 ||||||||||||||||||||| Sbjct: 24105 cgcagctcgtcgcggctgatg 24085
>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29 Length = 314100 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 299 gtcgacgtagccgtcgccgtcggtg 323 ||||||||||||||||||| ||||| Sbjct: 80316 gtcgacgtagccgtcgccgccggtg 80340
>gb|S74247.1| GCAP=photoreceptor guanylyl cyclase-activating protein [cattle, retinas, Genomic, 985 nt] Length = 985 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Minus Query: 394 gcagctcgtcgcggctgatgcggccgtcgcggtccacgtcg 434 |||||||||||||| |||||| |||| || |||||||||| Sbjct: 585 gcagctcgtcgcggatgatgcatccgttgccgtccacgtcg 545
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 292 cgccgtcgtcgacgtagccgtcgccgtcg 320 ||||||||||| ||| ||||||||||||| Sbjct: 16957331 cgccgtcgtcgccgttgccgtcgccgtcg 16957303 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 292 cgccgtcgtcgacgtagccgtcgccgtc 319 ||||| ||||||||| |||||||||||| Sbjct: 5315063 cgccgccgtcgacgtcgccgtcgccgtc 5315036
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 289 cctcgccgtcgtcgacgtagccgtc 313 |||||||||||||||||| |||||| Sbjct: 2639839 cctcgccgtcgtcgacgtcgccgtc 2639815 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 297 tcgtcgacgtagccgtcgccgtcg 320 |||||||||| ||||||||||||| Sbjct: 13503991 tcgtcgacgtcgccgtcgccgtcg 13503968
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 405 cggctgatgcggccgtcgcggtccacgtc 433 ||||||||||| |||||||||||| |||| Sbjct: 11063668 cggctgatgcgaccgtcgcggtccgcgtc 11063640
>gb|AC026815.8|AC026815 Oryza sativa chromosome 10 BAC OSJNBa0079L16 genomic sequence, complete sequence Length = 147452 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 292 cgccgtcgtcgacgtagccgtcgccgtcg 320 ||||||||||| ||| ||||||||||||| Sbjct: 141783 cgccgtcgtcgccgttgccgtcgccgtcg 141755
>dbj|AP002900.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443E07 Length = 159440 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 310 cgtcgccgtcggtgtcggcgt 330 ||||||||||||||||||||| Sbjct: 130525 cgtcgccgtcggtgtcggcgt 130505
>dbj|AP003703.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1027_G06 Length = 121885 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 289 cctcgccgtcgtcgacgtagccgtc 313 |||||||||||||||||| |||||| Sbjct: 65557 cctcgccgtcgtcgacgtcgccgtc 65533
>dbj|AP003054.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0436D06 Length = 148246 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 308 gccgtcgccgtcggtgtcggc 328 ||||||||||||||||||||| Sbjct: 95499 gccgtcgccgtcggtgtcggc 95479
>dbj|AP003022.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0681B11 Length = 144091 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 308 gccgtcgccgtcggtgtcggc 328 ||||||||||||||||||||| Sbjct: 87561 gccgtcgccgtcggtgtcggc 87581
>dbj|AP005735.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0034B12 Length = 124083 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Minus Query: 281 gccgtccacctcgccgtcgtcgacgtagccgtcgccg 317 |||||||||||||||| || ||||| |||||||||| Sbjct: 21533 gccgtccacctcgccgccgacgacgccgccgtcgccg 21497
>dbj|AP006756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0450E05 Length = 176553 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Minus Query: 281 gccgtccacctcgccgtcgtcgacgtagccgtcgccg 317 |||||||||||||||| || ||||| |||||||||| Sbjct: 142779 gccgtccacctcgccgccgacgacgccgccgtcgccg 142743
>dbj|AK099476.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013024O19, full insert sequence Length = 942 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 405 cggctgatgcggccgtcgcggtccacgtc 433 ||||||||||| |||||||||||| |||| Sbjct: 208 cggctgatgcgaccgtcgcggtccgcgtc 180
>dbj|AK072726.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023139K02, full insert sequence Length = 891 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 308 gccgtcgccgtcggtgtcggc 328 ||||||||||||||||||||| Sbjct: 605 gccgtcgccgtcggtgtcggc 585
>dbj|AK064844.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000G08, full insert sequence Length = 1075 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 308 gccgtcgccgtcggtgtcggc 328 ||||||||||||||||||||| Sbjct: 694 gccgtcgccgtcggtgtcggc 674
>dbj|AK058663.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-G06, full insert sequence Length = 799 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 405 cggctgatgcggccgtcgcggtccacgtc 433 ||||||||||| |||||||||||| |||| Sbjct: 205 cggctgatgcgaccgtcgcggtccgcgtc 177
>gb|AC137071.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042B10, from chromosome 3, complete sequence Length = 144205 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 405 cggctgatgcggccgtcgcggtccacgtc 433 ||||||||||| |||||||||||| |||| Sbjct: 110390 cggctgatgcgaccgtcgcggtccgcgtc 110362
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 292 cgccgtcgtcgacgtagccgtcgccgtcg 320 ||||||||||| ||| ||||||||||||| Sbjct: 16966371 cgccgtcgtcgccgttgccgtcgccgtcg 16966343 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 292 cgccgtcgtcgacgtagccgtcgccgtc 319 ||||| ||||||||| |||||||||||| Sbjct: 5315850 cgccgccgtcgacgtcgccgtcgccgtc 5315823
>ref|NM_120143.2| Arabidopsis thaliana MI-1-P SYNTHASE; inositol-3-phosphate synthase AT4G39800 (MI-1-P SYNTHASE) mRNA, complete cds Length = 1918 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 gttcctgatcgccatatcaa 525 |||||||||||||||||||| Sbjct: 968 gttcctgatcgccatatcaa 949
>gb|AE010366.1| Methanopyrus kandleri AV19 section 65 of 157 of the complete genome Length = 11173 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 gcgacgatcctgagcccgag 256 |||||||||||||||||||| Sbjct: 4717 gcgacgatcctgagcccgag 4698
>ref|XM_483780.1| Oryza sativa (japonica cultivar-group), mRNA Length = 646 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 agccgtcgccgtcggtgtcg 326 |||||||||||||||||||| Sbjct: 321 agccgtcgccgtcggtgtcg 302
>ref|XM_475605.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2313 Score = 40.1 bits (20), Expect = 7.5 Identities = 35/40 (87%) Strand = Plus / Minus Query: 281 gccgtccacctcgccgtcgtcgacgtagccgtcgccgtcg 320 ||||||| ||||| ||||| || ||| ||||||||||||| Sbjct: 204 gccgtcctcctcgtcgtcgacgccgtcgccgtcgccgtcg 165
>ref|XM_475168.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 606 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 305 gtagccgtcgccgtcggtgtcggc 328 ||||||||||||||||| |||||| Sbjct: 318 gtagccgtcgccgtcggagtcggc 295
>ref|XM_477723.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1410 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 297 tcgtcgacgtagccgtcgccgtcg 320 |||||||||| ||||||||||||| Sbjct: 719 tcgtcgacgtcgccgtcgccgtcg 696
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 304 cgtagccgtcgccgtcggtgtcgg 327 ||||||||||||||| |||||||| Sbjct: 2592387 cgtagccgtcgccgttggtgtcgg 2592364
>gb|AC091238.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0022I16, complete sequence Length = 127068 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 292 cgccgtcgtcgacgtagccgtcgccgtc 319 ||||| ||||||||| |||||||||||| Sbjct: 78261 cgccgccgtcgacgtcgccgtcgccgtc 78234
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 294 ccgtcgtcgacgtagccgtcgccg 317 ||||||||||||||||||| |||| Sbjct: 3065994 ccgtcgtcgacgtagccgttgccg 3066017
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 gccgtcgccgtcggtgtcgg 327 |||||||||||||||||||| Sbjct: 4383431 gccgtcgccgtcggtgtcgg 4383450
>ref|NM_001018111.1| Homo sapiens podocalyxin-like (PODXL), transcript variant 1, mRNA Length = 5999 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 293 gccgtcgtcgacgtagccgtcgccgtcg 320 |||||||||| ||| ||||||||||||| Sbjct: 310 gccgtcgtcgccgtcgccgtcgccgtcg 337
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 294 ccgtcgtcgacgtagccgtcgccg 317 ||||||||||||||||||| |||| Sbjct: 166380 ccgtcgtcgacgtagccgttgccg 166357
>gb|AE007196.1| Sinorhizobium meliloti 1021 plasmid pSymA section 2 of 121 of the complete plasmid sequence Length = 10029 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 gcggccgtcgcggtccacgt 432 |||||||||||||||||||| Sbjct: 29 gcggccgtcgcggtccacgt 10
>gb|AE007195.1| Sinorhizobium meliloti 1021 plasmid pSymA section 1 of 121 of the complete plasmid sequence Length = 11408 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 gcggccgtcgcggtccacgt 432 |||||||||||||||||||| Sbjct: 11377 gcggccgtcgcggtccacgt 11358
>ref|NM_005397.2| Homo sapiens podocalyxin-like (PODXL), transcript variant 2, mRNA Length = 5903 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 293 gccgtcgtcgacgtagccgtcgccgtcg 320 |||||||||| ||| ||||||||||||| Sbjct: 310 gccgtcgtcgccgtcgccgtcgccgtcg 337
>gb|AC136222.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088M05, complete sequence Length = 153368 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 305 gtagccgtcgccgtcggtgtcggc 328 ||||||||||||||||| |||||| Sbjct: 55999 gtagccgtcgccgtcggagtcggc 56022
>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence Length = 1212674 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 272 ctcgatgaggccgtccacctcgcc 295 ||||||||||||||| |||||||| Sbjct: 44689 ctcgatgaggccgtctacctcgcc 44712
>gb|AY446894.1| Human herpesvirus 5 strain Merlin, complete genome Length = 235645 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 tcgccgtcgtcgacgtagccgtcg 314 |||||||||||||||| ||||||| Sbjct: 163151 tcgccgtcgtcgacgtcgccgtcg 163174
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 400 cgtcgcggctgatgcggccg 419 |||||||||||||||||||| Sbjct: 3279561 cgtcgcggctgatgcggccg 3279542
>gb|AY486478.1|AY486470S09 Human herpesvirus 5 strain Toledo genome, partial sequence Length = 10194 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 tcgccgtcgtcgacgtagccgtcg 314 |||||||||||||||| ||||||| Sbjct: 5822 tcgccgtcgtcgacgtcgccgtcg 5845
>ref|XM_842579.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0649) partial mRNA Length = 2496 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 272 ctcgatgaggccgtccacctcgcc 295 ||||||||||||||| |||||||| Sbjct: 477 ctcgatgaggccgtctacctcgcc 454
>gb|AC146999.1| Human Herpesvirus 5 AD169-BAC isolate, complete sequence Length = 233739 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 291 tcgccgtcgtcgacgtagccgtcg 314 |||||||||||||||| ||||||| Sbjct: 58826 tcgccgtcgtcgacgtcgccgtcg 58803
>gb|AC146907.1| Human Herpesvirus 5 FIX-BAC isolate, complete sequence Length = 229209 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 291 tcgccgtcgtcgacgtagccgtcg 314 |||||||||||||||| ||||||| Sbjct: 65057 tcgccgtcgtcgacgtcgccgtcg 65034
>gb|AC146906.1| Human Herpesvirus 5 TR-BAC isolate, complete sequence Length = 234881 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 tcgccgtcgtcgacgtagccgtcg 314 |||||||||||||||| ||||||| Sbjct: 198847 tcgccgtcgtcgacgtcgccgtcg 198870
>gb|AC146905.1| Human Herpesvirus 5 Toledo-BAC isolate, complete sequence Length = 226889 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 291 tcgccgtcgtcgacgtagccgtcg 314 |||||||||||||||| ||||||| Sbjct: 60498 tcgccgtcgtcgacgtcgccgtcg 60475
>gb|AC146904.1| Human Herpesvirus 5 PH-BAC isolate, complete sequence Length = 229700 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 291 tcgccgtcgtcgacgtagccgtcg 314 |||||||||||||||| ||||||| Sbjct: 65160 tcgccgtcgtcgacgtcgccgtcg 65137
>gb|AC146851.1| Human Herpesvirus 5 Towne-BAC isolate, complete sequence Length = 229483 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 tcgccgtcgtcgacgtagccgtcg 314 |||||||||||||||| ||||||| Sbjct: 196292 tcgccgtcgtcgacgtcgccgtcg 196315
>gb|AY315197.1| Human herpesvirus 5 strain Towne, complete genome Length = 231236 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 tcgccgtcgtcgacgtagccgtcg 314 |||||||||||||||| ||||||| Sbjct: 161265 tcgccgtcgtcgacgtcgccgtcg 161288
>gb|AY303985.1| Plagiolepis pygmaea isolate P23 microsatellite sequence Length = 532 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 297 tcgtcgacgtagccgtcgccgtcg 320 |||||||||| ||||||||||||| Sbjct: 370 tcgtcgacgtcgccgtcgccgtcg 393
>ref|XM_500631.1| Yarrowia lipolytica CLIB122, YALI0B08206g predicted mRNA Length = 1236 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 gtccacctcgccgtcgtcga 303 |||||||||||||||||||| Sbjct: 972 gtccacctcgccgtcgtcga 991
>emb|AL162371.13| Human DNA sequence from clone RP11-16M10 on chromosome 13, complete sequence Length = 64028 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 aggtaacatgcatggataga 187 |||||||||||||||||||| Sbjct: 5716 aggtaacatgcatggataga 5697
>emb|Z98604.1|MLCB2052 Mycobacterium leprae cosmid B2052 Length = 35445 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 tcgacgtagccgtcgccgtc 319 |||||||||||||||||||| Sbjct: 31252 tcgacgtagccgtcgccgtc 31233
>emb|Z23265.1|YLCRF1 Y.lipolytica CRF1 gene encoding product required for copper resistance Length = 4020 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 gtccacctcgccgtcgtcga 303 |||||||||||||||||||| Sbjct: 2433 gtccacctcgccgtcgtcga 2452
>emb|X17403.1|HEHCMVCG Human cytomegalovirus strain AD169 complete genome Length = 229354 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 tcgccgtcgtcgacgtagccgtcg 314 |||||||||||||||| ||||||| Sbjct: 161823 tcgccgtcgtcgacgtcgccgtcg 161846
>emb|BX842584.1| Mycobacterium tuberculosis H37Rv complete genome; segment 13/13 Length = 244800 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 gccgtcgccgtcggtgtcgg 327 |||||||||||||||||||| Sbjct: 224392 gccgtcgccgtcggtgtcgg 224411
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 294 ccgtcgtcgacgtagccgtcgccg 317 ||||||||||||||||||| |||| Sbjct: 4018236 ccgtcgtcgacgtagccgttgccg 4018213
>emb|BX248347.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 14/14 Length = 278492 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 gccgtcgccgtcggtgtcgg 327 |||||||||||||||||||| Sbjct: 258085 gccgtcgccgtcggtgtcgg 258104
>emb|AL939132.1|SCO939132 Streptomyces coelicolor A3(2) complete genome; segment 29/29 Length = 302007 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 295 cgtcgtcgacgtagccgtcgccgt 318 ||||||||||||||||| |||||| Sbjct: 44005 cgtcgtcgacgtagccggcgccgt 43982
>gb|AY035045.1| Arabidopsis thaliana At4g39800 mRNA, complete sequence Length = 1930 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 gttcctgatcgccatatcaa 525 |||||||||||||||||||| Sbjct: 968 gttcctgatcgccatatcaa 949
>emb|AL583922.1|MLEPRTN6 Mycobacterium leprae strain TN complete genome; segment 6/10 Length = 318200 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 tcgacgtagccgtcgccgtc 319 |||||||||||||||||||| Sbjct: 24401 tcgacgtagccgtcgccgtc 24420
>emb|AL161595.2|ATCHRIV91 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 91 Length = 198151 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 506 gttcctgatcgccatatcaa 525 |||||||||||||||||||| Sbjct: 190737 gttcctgatcgccatatcaa 190756
>emb|AL035708.2|ATT5J17 Arabidopsis thaliana DNA chromosome 4, BAC clone T5J17 (ESSA project) Length = 118267 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 506 gttcctgatcgccatatcaa 525 |||||||||||||||||||| Sbjct: 8153 gttcctgatcgccatatcaa 8172
>emb|AL022605.3|ATT19P19 Arabidopsis thaliana DNA chromosome 4, BAC clone T19P19 (ESSA project) Length = 88343 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 506 gttcctgatcgccatatcaa 525 |||||||||||||||||||| Sbjct: 73707 gttcctgatcgccatatcaa 73726
>gb|AC159903.3| Pan troglodytes BAC clone CH251-459A3 from chromosome unknown, complete sequence Length = 216963 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 gctagcttcccttaatagac 213 |||||||||||||||||||| Sbjct: 135177 gctagcttcccttaatagac 135196
>gb|AC122146.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0022I16, complete sequence Length = 126133 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 292 cgccgtcgtcgacgtagccgtcgccgtc 319 ||||| ||||||||| |||||||||||| Sbjct: 11193 cgccgccgtcgacgtcgccgtcgccgtc 11166
>gb|AF447493.1| Azospirillum brasilense strain Sp7 acetoacetyl-CoA synthetase (acsA) gene, complete cds Length = 1980 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 484 gcgaccgcgtcgccgccgtc 503 |||||||||||||||||||| Sbjct: 443 gcgaccgcgtcgccgccgtc 462
>gb|AF372954.1|AF372954 Arabidopsis thaliana AT4g39800/T19P19_190 mRNA, complete cds Length = 1870 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 gttcctgatcgccatatcaa 525 |||||||||||||||||||| Sbjct: 968 gttcctgatcgccatatcaa 949
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 agccgtcgccgtcggtgtcg 326 |||||||||||||||||||| Sbjct: 28070457 agccgtcgccgtcggtgtcg 28070438
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 297 tcgtcgacgtagccgtcgccgtcg 320 |||||||||| ||||||||||||| Sbjct: 2773514 tcgtcgacgtcgccgtcgccgtcg 2773491
>emb|BX827819.1|CNS0A4MK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH24ZE06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1828 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 gttcctgatcgccatatcaa 525 |||||||||||||||||||| Sbjct: 954 gttcctgatcgccatatcaa 935
>gb|AC080091.5| Homo sapiens BAC clone RP11-802G5 from 2, complete sequence Length = 158813 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 gctagcttcccttaatagac 213 |||||||||||||||||||| Sbjct: 37884 gctagcttcccttaatagac 37865
>dbj|AK223573.1| Homo sapiens mRNA for podocalyxin-like precursor variant, clone: FCC129D02 Length = 2056 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 293 gccgtcgtcgacgtagccgtcgccgtcg 320 |||||||||| ||| ||||||||||||| Sbjct: 310 gccgtcgtcgccgtcgccgtcgccgtcg 337
>gb|BC093730.1| Homo sapiens podocalyxin-like, mRNA (cDNA clone MGC:120765 IMAGE:7939575), complete cds Length = 1672 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 293 gccgtcgtcgacgtagccgtcgccgtcg 320 |||||||||| ||| ||||||||||||| Sbjct: 80 gccgtcgtcgccgtcgccgtcgccgtcg 107
>gb|AF200304.1|AF200304 Caldibacillus cellulovorans putative type IIIb cellulose-binding domain gene, partial cds; and beta-1,4-xylanase XynA precursor (xynA) gene, complete cds Length = 3237 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 gtcgccgtcggtgtcggcgt 330 |||||||||||||||||||| Sbjct: 2656 gtcgccgtcggtgtcggcgt 2637
>gb|AC008264.10|AC008264 Homo sapiens chromosome 7 clone RP11-180C16, complete sequence Length = 162694 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 293 gccgtcgtcgacgtagccgtcgccgtcg 320 |||||||||| ||| ||||||||||||| Sbjct: 65761 gccgtcgtcgccgtcgccgtcgccgtcg 65734
>dbj|AB110611.1| Pseudomonas sp. MT-1 nar gene cluster (orf1, orf2, orf3, narL, narX, narK, orf4, narM, narG, narH, narJ, narI, nifM), partial and complete cds Length = 15819 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 atgccacgcttgctcttgta 355 |||||||||||||||||||| Sbjct: 8951 atgccacgcttgctcttgta 8932
>gb|BC042466.1| Homo sapiens, Similar to podocalyxin-like, clone IMAGE:5172924, mRNA Length = 6199 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 293 gccgtcgtcgacgtagccgtcgccgtcg 320 |||||||||| ||| ||||||||||||| Sbjct: 264 gccgtcgtcgccgtcgccgtcgccgtcg 291
>gb|AY085931.1| Arabidopsis thaliana clone 1978 mRNA, complete sequence Length = 1837 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 gttcctgatcgccatatcaa 525 |||||||||||||||||||| Sbjct: 968 gttcctgatcgccatatcaa 949
>dbj|AP005524.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0562A06 Length = 154198 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 agccgtcgccgtcggtgtcg 326 |||||||||||||||||||| Sbjct: 147949 agccgtcgccgtcggtgtcg 147930
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 290 ctcgccgtcgtcgacgtagccgtcgccgtcgg 321 |||||||||| ||||||| |||||||||||| Sbjct: 3806690 ctcgccgtcgatgacgtagtcgtcgccgtcgg 3806659
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 274 cgatgaggccgtccacctcgccgtcgtcgacg 305 ||||||||||| ||||||||||| ||||||| Sbjct: 1250629 cgatgaggccgaccacctcgccgcggtcgacg 1250660
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 gccgtcgccgtcggtgtcgg 327 |||||||||||||||||||| Sbjct: 203597 gccgtcgccgtcggtgtcgg 203616
>dbj|AP005893.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0030K05 Length = 157835 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 295 cgtcgtcgacgtagccgtcgccgtcggtgtcg 326 |||||||| ||| ||||||||||||| ||||| Sbjct: 139438 cgtcgtcgccgtcgccgtcgccgtcgctgtcg 139407
>dbj|AP005594.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0701E06 Length = 123415 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 295 cgtcgtcgacgtagccgtcgccgtcggtgtcg 326 |||||||| ||| ||||||||||||| ||||| Sbjct: 965 cgtcgtcgccgtcgccgtcgccgtcgctgtcg 934
>dbj|AP005412.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0050G13 Length = 150685 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 297 tcgtcgacgtagccgtcgccgtcg 320 |||||||||| ||||||||||||| Sbjct: 41742 tcgtcgacgtcgccgtcgccgtcg 41719
>dbj|AP005831.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1123E10 Length = 134641 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 297 tcgtcgacgtagccgtcgccgtcg 320 |||||||||| ||||||||||||| Sbjct: 83674 tcgtcgacgtcgccgtcgccgtcg 83651
>dbj|AP005544.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0604E01 Length = 159049 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 agccgtcgccgtcggtgtcg 326 |||||||||||||||||||| Sbjct: 67952 agccgtcgccgtcggtgtcg 67933
>dbj|AK121445.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141E01, full insert sequence Length = 646 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 agccgtcgccgtcggtgtcg 326 |||||||||||||||||||| Sbjct: 321 agccgtcgccgtcggtgtcg 302
>emb|Y17835.1|PPY17835 Phleum pratense mRNA for p7 protein Length = 575 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 agccgtcgccgtcggtgtcg 326 |||||||||||||||||||| Sbjct: 208 agccgtcgccgtcggtgtcg 189
>dbj|AK107275.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-A04, full insert sequence Length = 2661 Score = 40.1 bits (20), Expect = 7.5 Identities = 35/40 (87%) Strand = Plus / Minus Query: 281 gccgtccacctcgccgtcgtcgacgtagccgtcgccgtcg 320 ||||||| ||||| ||||| || ||| ||||||||||||| Sbjct: 299 gccgtcctcctcgtcgtcgacgccgtcgccgtcgccgtcg 260
>dbj|AK099962.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013126K19, full insert sequence Length = 961 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 305 gtagccgtcgccgtcggtgtcggc 328 ||||||||||||||||| |||||| Sbjct: 418 gtagccgtcgccgtcggagtcggc 395
>gb|BC112035.1| Homo sapiens podocalyxin-like, transcript variant 2, mRNA (cDNA clone MGC:138240 IMAGE:8327503), complete cds Length = 1684 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 293 gccgtcgtcgacgtagccgtcgccgtcg 320 |||||||||| ||| ||||||||||||| Sbjct: 92 gccgtcgtcgccgtcgccgtcgccgtcg 119
>dbj|AK067214.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097O18, full insert sequence Length = 961 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 305 gtagccgtcgccgtcggtgtcggc 328 ||||||||||||||||| |||||| Sbjct: 418 gtagccgtcgccgtcggagtcggc 395
>gb|AY106010.1| Zea mays PCO109103 mRNA sequence Length = 513 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 agccgtcgccgtcggtgtcg 326 |||||||||||||||||||| Sbjct: 327 agccgtcgccgtcggtgtcg 308
>gb|AF131877.1|AF131877 Streptomyces collinus putative naphthomycin AHBA biosynthetic gene cluster, complete sequence Length = 7298 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 280 ggccgtccacctcgccgtcgtcgacgta 307 ||||||| ||||||||||||||| |||| Sbjct: 4851 ggccgtcgacctcgccgtcgtcgccgta 4878
>gb|BT001931.1| Arabidopsis thaliana clone C105378 putative myo-inositol-1-phosphate synthase (At4g39800) mRNA, complete cds Length = 1567 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 gttcctgatcgccatatcaa 525 |||||||||||||||||||| Sbjct: 897 gttcctgatcgccatatcaa 878
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 296 gtcgtcgacgtagccgtcgccgtc 319 |||| ||||||||||||||||||| Sbjct: 2566858 gtcggcgacgtagccgtcgccgtc 2566881 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 303 acgtagccgtcgccgtcggtgtcggcgt 330 ||||||||||||||||||| ||||||| Sbjct: 1263961 acgtagccgtcgccgtcggcttcggcgt 1263988
>gb|U97519.1|HSU97519 Homo sapiens podocalyxin-like protein mRNA, complete cds Length = 5869 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 293 gccgtcgtcgacgtagccgtcgccgtcg 320 |||||||||| ||| ||||||||||||| Sbjct: 310 gccgtcgtcgccgtcgccgtcgccgtcg 337
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 gtccacctcgccgtcgtcga 303 |||||||||||||||||||| Sbjct: 1112796 gtccacctcgccgtcgtcga 1112815
>gb|U57433.1|HCU57433 Human cytomegalovirus early phosphoprotein p34 mRNA, complete cds Length = 2401 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 tcgccgtcgtcgacgtagccgtcg 314 |||||||||||||||| ||||||| Sbjct: 1290 tcgccgtcgtcgacgtcgccgtcg 1313
>gb|U57432.1|HCU57432 Human cytomegalovirus early phosphoprotein p84 mRNA, complete cds Length = 2253 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 tcgccgtcgtcgacgtagccgtcg 314 |||||||||||||||| ||||||| Sbjct: 1142 tcgccgtcgtcgacgtcgccgtcg 1165
>gb|AD000008.1|MSGY367 Mycobacterium tuberculosis sequence from clone y367 Length = 35336 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 gccgtcgccgtcggtgtcgg 327 |||||||||||||||||||| Sbjct: 16834 gccgtcgccgtcggtgtcgg 16815
>gb|U38920.1|PVU38920 Phaseolus vulgaris 1L-myo-inositol 1-phosphate synthase mRNA, complete cds Length = 1871 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 gttcctgatcgccatatcaa 525 |||||||||||||||||||| Sbjct: 983 gttcctgatcgccatatcaa 964
>gb|U04876.1|ATU04876 Arabidopsis thaliana Columbia myo-inositol-1-phosphate synthase mRNA, complete cds Length = 1921 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 gttcctgatcgccatatcaa 525 |||||||||||||||||||| Sbjct: 947 gttcctgatcgccatatcaa 928
>gb|AC087425.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0676G05, complete sequence Length = 167317 Score = 40.1 bits (20), Expect = 7.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 281 gccgtccacctcgccgtcgtcgacgtagccgtcgccgtcg 320 ||||||| ||||| ||||| || ||| ||||||||||||| Sbjct: 72946 gccgtcctcctcgtcgtcgacgccgtcgccgtcgccgtcg 72985
>gb|U04727.1|PPU04727 Porphyra purpurea Avonport clone 23b6 sporophyte-specific mRNA, partial sequence Length = 1008 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 cgaccgcgtcgccgccgtca 504 |||||||||||||||||||| Sbjct: 497 cgaccgcgtcgccgccgtca 516 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,780,954 Number of Sequences: 3902068 Number of extensions: 2780954 Number of successful extensions: 61898 Number of sequences better than 10.0: 141 Number of HSP's better than 10.0 without gapping: 150 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 58112 Number of HSP's gapped (non-prelim): 3783 length of query: 552 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 529 effective length of database: 17,143,297,704 effective search space: 9068804485416 effective search space used: 9068804485416 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
