Clone Name | rbasd16l15 |
---|---|
Clone Library Name | barley_pub |
>DHH1_CANGA (Q6FQU5) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)| Length = 507 Score = 31.2 bits (69), Expect = 0.67 Identities = 14/45 (31%), Positives = 19/45 (42%) Frame = +1 Query: 28 HHRNTENXTHNATQTQPQPGHRVRRPGDTTFVLPQVSFSLFLPIP 162 H R + Q Q Q G + PG F+ PQ F+P+P Sbjct: 424 HQRRMQEQQQQQQQQQGQQGQQQGYPGQQAFIPPQQGQPQFMPVP 468
>SCNAA_XENLA (P51167) Amiloride-sensitive sodium channel alpha-subunit| (Epithelial Na+ channel alpha subunit) (Alpha ENaC) (Nonvoltage-gated sodium channel 1 alpha subunit) (SCNEA) (Alpha NaCH) Length = 632 Score = 29.6 bits (65), Expect = 2.0 Identities = 14/38 (36%), Positives = 19/38 (50%) Frame = +1 Query: 214 MMIVRRQQEKKEELGEPNYLTRFPAPAFGDRSFMNPHV 327 M+++ R KK GE + PAPAF D PH+ Sbjct: 540 MILLHRYYYKKANEGEETTVVPTPAPAFADLEQQVPHI 577
>B3A3_MOUSE (P16283) Anion exchange protein 3 (Neuronal band 3-like protein)| (Solute carrier family 4 member 3) Length = 1227 Score = 29.3 bits (64), Expect = 2.6 Identities = 11/29 (37%), Positives = 18/29 (62%) Frame = +1 Query: 31 HRNTENXTHNATQTQPQPGHRVRRPGDTT 117 HR+T + TH+ + P H++RRP T+ Sbjct: 74 HRHTSHHTHHPLSARLPPPHKLRRPPPTS 102
>TERM_ADECC (Q65947) DNA terminal protein (Bellett protein) (pTP protein)| Length = 608 Score = 28.9 bits (63), Expect = 3.3 Identities = 15/50 (30%), Positives = 24/50 (48%) Frame = +1 Query: 136 SFSLFLPIPMIPL*GGVFRAKQTETGMMIVRRQQEKKEELGEPNYLTRFP 285 + SL P P PL GG F + E G + + ++ E+ E ++ R P Sbjct: 292 ALSLPGPAPCTPLSGGAFELRPRENGRAVTEEMRRRRGEMIE-RFIDRLP 340
>TERM_ADECR (Q96682) DNA terminal protein (Bellett protein) (pTP protein)| Length = 723 Score = 28.9 bits (63), Expect = 3.3 Identities = 15/50 (30%), Positives = 24/50 (48%) Frame = +1 Query: 136 SFSLFLPIPMIPL*GGVFRAKQTETGMMIVRRQQEKKEELGEPNYLTRFP 285 + SL P P PL GG F + E G + + ++ E+ E ++ R P Sbjct: 407 ALSLPGPAPCTPLSGGAFELRPRENGRAVTEEMRRRRGEMIE-RFIDRLP 455
>GP152_MOUSE (Q8BXS7) Probable G-protein coupled receptor 152| Length = 511 Score = 28.1 bits (61), Expect = 5.7 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = +1 Query: 235 QEKKEELGEPNYLTRFPAPAFGDRSFMNP 321 Q + + + +P T P PAFGD S NP Sbjct: 438 QPQLDPVAQPQSNTETPIPAFGDESASNP 466 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 42,208,391 Number of Sequences: 219361 Number of extensions: 646476 Number of successful extensions: 1491 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1472 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1491 length of database: 80,573,946 effective HSP length: 86 effective length of database: 61,708,900 effective search space used: 1481013600 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)