ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd16l13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AGAL_ORYSA (Q9FXT4) Alpha-galactosidase precursor (EC 3.2.1.22) ... 144 4e-35
2AGAL_COFAR (Q42656) Alpha-galactosidase precursor (EC 3.2.1.22) ... 109 2e-24
3AGAL_CYATE (P14749) Alpha-galactosidase precursor (EC 3.2.1.22) ... 99 3e-21
4IMD_ARTGO (Q44052) Isomalto-dextranase precursor (EC 3.2.1.94) (... 39 0.003
5PHSM_KLEPN (P07094) Maltodextrin phosphorylase (EC 2.4.1.1) (Fra... 32 0.47
6LATS1_HUMAN (O95835) Serine/threonine-protein kinase LATS1 (EC 2... 30 1.1
7SLIT_DROME (P24014) Protein slit precursor [Contains: Protein sl... 30 1.1
8CARA_ACIAD (Q6F8M7) Carbamoyl-phosphate synthase small chain (EC... 30 1.1
9ZDHC8_PANTR (Q2THX0) Probable palmitoyltransferase ZDHHC8 (EC 2.... 30 1.4
10COFA1_HUMAN (P39059) Collagen alpha-1(XV) chain precursor [Conta... 30 1.4
11LATS1_MOUSE (Q8BYR2) Serine/threonine-protein kinase LATS1 (EC 2... 30 1.8
12MEL_ZYGCI (Q99172) Alpha-galactosidase precursor (EC 3.2.1.22) (... 29 3.1
13SYI_MYCPN (P75258) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isole... 29 3.1
14TRZA_RHOCO (Q52725) S-triazine hydrolase (EC 3.8.1.-) (N-ethylam... 28 4.0
15MP2K1_XENLA (Q05116) Dual specificity mitogen-activated protein ... 28 4.0
16RSV1_SCHPO (Q9P7D9) DNA-binding protein rsv1 28 4.0
17ARI1B_HUMAN (Q8NFD5) AT-rich interactive domain-containing prote... 28 5.2
18CP19A_ORENI (P70091) Cytochrome P450 19A1 (EC 1.14.14.1) (Aromat... 28 6.8
19CWC22_NEUCR (Q7RX84) Pre-mRNA-splicing factor cwc-22 28 6.8
20RRPL_UUK (P33453) RNA-directed RNA polymerase (EC 2.7.7.48) (L p... 28 6.8
21CPB3_CAEEL (O01835) Cytoplasmic polyadenylation element-binding ... 28 6.8
22YPCB_ECOLI (P04481) Hypothetical protein in cib 5'region (Fragment) 28 6.8
23DCMC_RAT (Q920F5) Malonyl-CoA decarboxylase, mitochondrial precu... 28 6.8
24MEL_TORDE (Q9UVD6) Alpha-galactosidase precursor (EC 3.2.1.22) (... 28 6.8
25SYTL2_MOUSE (Q99N50) Synaptotagmin-like protein 2 (Exophilin-4) 28 6.8
26FPG_DECAR (Q479M6) Formamidopyrimidine-DNA glycosylase (EC 3.2.2... 27 8.9
27OMPA_RICRI (P15921) Outer membrane protein A precursor (190 kDa ... 27 8.9
28TF7L1_MOUSE (Q9Z1J1) Transcription factor 7-like 1 (HMG box tran... 27 8.9
29ILV1_MAIZE (Q41768) Acetolactate synthase 1, chloroplast precurs... 27 8.9
30FPG_GLOVI (Q7NFW7) Formamidopyrimidine-DNA glycosylase (EC 3.2.2... 27 8.9
31OMPA_RICCN (Q52657) Outer membrane protein A precursor (190 kDa ... 27 8.9
32GLE1_MOUSE (Q8R322) Nucleoporin GLE1 (GLE1-like protein) 27 8.9
33Y4GI_RHISN (P55465) Hypothetical protein y4gI 27 8.9

>AGAL_ORYSA (Q9FXT4) Alpha-galactosidase precursor (EC 3.2.1.22) (Melibiase)|
           (Alpha-D-galactoside galactohydrolase)
          Length = 417

 Score =  144 bits (364), Expect = 4e-35
 Identities = 65/76 (85%), Positives = 70/76 (92%)
 Frame = -1

Query: 400 GLEVWAGPLSGNRKAVVLWNRQGYQATITAHWSNVGLPASASVTARDLWAHSSFSAQGQL 221
           GLEVWAGPLS NRKAVVLWNRQ YQATITAHWSN+GL  S +VTARDLWAHSSF+AQGQ+
Sbjct: 341 GLEVWAGPLSNNRKAVVLWNRQSYQATITAHWSNIGLAGSVAVTARDLWAHSSFAAQGQI 400

Query: 220 SASVGPHDCKMYILTP 173
           SASV PHDCKMY+LTP
Sbjct: 401 SASVAPHDCKMYVLTP 416



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>AGAL_COFAR (Q42656) Alpha-galactosidase precursor (EC 3.2.1.22) (Melibiase)|
           (Alpha-D-galactoside galactohydrolase)
          Length = 378

 Score =  109 bits (272), Expect = 2e-24
 Identities = 53/79 (67%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
 Frame = -1

Query: 403 GGLEVWAGPLSGNRKAVVLWNRQGYQATITAHWSNVGLPASASVTARDLWAHSS-FSAQG 227
           G LEVWAGPLSG R AV LWNR    ATITA+WS+VGLP++A V ARDLWAHS+  S +G
Sbjct: 300 GDLEVWAGPLSGKRVAVALWNRGSSTATITAYWSDVGLPSTAVVNARDLWAHSTEKSVKG 359

Query: 226 QLSASVGPHDCKMYILTPK 170
           Q+SA+V  HD KMY+LTP+
Sbjct: 360 QISAAVDAHDSKMYVLTPQ 378



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>AGAL_CYATE (P14749) Alpha-galactosidase precursor (EC 3.2.1.22) (Melibiase)|
           (Alpha-D-galactoside galactohydrolase)
          Length = 411

 Score = 98.6 bits (244), Expect = 3e-21
 Identities = 44/77 (57%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
 Frame = -1

Query: 397 LEVWAGPLSGNRKAVVLWNRQGYQATITAHWSNVGLPASASVTARDLWAHSSFS-AQGQL 221
           LEVWAGPLS N+ AV+LWNR   +AT+TA WS++GL    +V ARDLW HS+ S   G++
Sbjct: 334 LEVWAGPLSDNKVAVILWNRSSSRATVTASWSDIGLQQGTTVDARDLWEHSTQSLVSGEI 393

Query: 220 SASVGPHDCKMYILTPK 170
           SA +  H CKMY+LTP+
Sbjct: 394 SAEIDSHACKMYVLTPR 410



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>IMD_ARTGO (Q44052) Isomalto-dextranase precursor (EC 3.2.1.94) (Glucan|
           1,6-alpha-isomaltosidase) (Exo-isomaltohydrolase)
          Length = 641

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
 Frame = -1

Query: 394 EVWAGPLSGNRKAVVLWNRQGYQA-TITAHWS-NVGLPASASVTARDLWAHSSFSAQGQL 221
           E WAG L      V L+NR   +  T T  ++ ++GL    +V  RDLW H +     + 
Sbjct: 420 ERWAGQLPDGSWGVALFNRSDTETVTKTIDFAKDLGLATGGNV--RDLWEHRNLGMDSRA 477

Query: 220 SASVGPHDCKMYILTP 173
           +A++ PH   ++ +TP
Sbjct: 478 TAALAPHASAIFRVTP 493



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>PHSM_KLEPN (P07094) Maltodextrin phosphorylase (EC 2.4.1.1) (Fragment)|
          Length = 108

 Score = 31.6 bits (70), Expect = 0.47
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -1

Query: 346 WNRQGYQATITAHWSNVGLPASASVTARDLWAHSSFSAQGQLSA 215
           +N+  +QA +T  W + GL +++ +T R  W   S +    LSA
Sbjct: 6   FNKAQFQAALTRQWQHFGLQSASEMTQRQWWRAVSGALSELLSA 49



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>LATS1_HUMAN (O95835) Serine/threonine-protein kinase LATS1 (EC 2.7.11.1) (Large|
           tumor suppressor homolog 1) (WARTS protein kinase)
           (h-warts)
          Length = 1130

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 3/90 (3%)
 Frame = +1

Query: 52  YIQLQLISNLM*PNRISQFISARLYRSPSLQTPSPESTVTLASGCTSCSHEAPLMRIVAP 231
           Y    +  ++M PNR S  +       P LQT  P+S+   A    S  HE P  +   P
Sbjct: 400 YTNGSIPQSMMVPNRNSHNMELYNISVPGLQTNWPQSSSAPAQSSPSSGHEIPTWQPNIP 459

Query: 232 ERRTT-SAPIDRERSRT--RMPEARRLTSV 312
            R  + + P+    S +    P A  +T++
Sbjct: 460 VRSNSFNNPLGNRASHSANSQPSATTVTAI 489



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>SLIT_DROME (P24014) Protein slit precursor [Contains: Protein slit N-product;|
            Protein slit C-product]
          Length = 1504

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 5/63 (7%)
 Frame = -2

Query: 174  QSNCRFRGRGL---QGRGSIEPS*DELRNAIRSHEVRNKL*LYVK--CREMCXLKFASCN 10
            Q  C+   RG    QG GS EP      +  R  +VR     Y +  CR    LK+A C 
Sbjct: 1403 QCKCKHGQRGRYCDQGEGSTEPPTVTAASTCRKEQVRE---YYTENDCRSRQPLKYAKCV 1459

Query: 9    GSC 1
            G C
Sbjct: 1460 GGC 1462



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>CARA_ACIAD (Q6F8M7) Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)|
           (Carbamoyl-phosphate synthetase glutamine chain)
          Length = 379

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 10/43 (23%)
 Frame = -1

Query: 292 LPASASVTARDLWAHSS----------FSAQGQLSASVGPHDC 194
           LPA+  VT R L+  ++          FS QG   AS GPHDC
Sbjct: 321 LPANLKVTHRSLFDGTNQGIHRTDKPAFSFQGHPEASPGPHDC 363



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>ZDHC8_PANTR (Q2THX0) Probable palmitoyltransferase ZDHHC8 (EC 2.3.1.-) (Zinc|
           finger DHHC domain-containing protein 8) (DHHC-8)
          Length = 765

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 31/94 (32%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
 Frame = +1

Query: 127 RSPSLQTP--SPESTVTLASGCTSCSHEAPLMRIVAPERRTTSAPIDRERSRTRMPEARR 300
           R+P+LQT   S  S+V+ A   +S S +A      AP  R +S    R  +R  +P    
Sbjct: 620 RNPALQTSLSSLSSSVSRAPRTSSSSLQADQASSNAPGPRPSSGS-HRSPARQGLPSP-- 676

Query: 301 LTSVR*WLPGTPACSIERPPFCCR*AVRPRPPNR 402
                   PGTP  +I R P  CR  + P  P R
Sbjct: 677 --------PGTPHLTILRGPQSCR--LHPHGPPR 700



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>COFA1_HUMAN (P39059) Collagen alpha-1(XV) chain precursor [Contains: Endostatin|
           (Endostatin-XV) (Restin) (Related to endostatin)]
          Length = 1388

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 15/75 (20%)
 Frame = +1

Query: 88  PNRISQFISARLYRSPSLQTPSPESTVTLASGCTSCSHE---------------APLMRI 222
           P  +   +SA+     +   PS E ++T A+  T  S                 APL   
Sbjct: 433 PGELDLSMSAQSLGEEATVGPSSEDSLTTAAAATEVSLSTFEDEEASGVPTDGLAPLTAT 492

Query: 223 VAPERRTTSAPIDRE 267
           +APER  TS P D E
Sbjct: 493 MAPERAVTSGPGDEE 507



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>LATS1_MOUSE (Q8BYR2) Serine/threonine-protein kinase LATS1 (EC 2.7.11.1) (Large|
           tumor suppressor homolog 1) (WARTS protein kinase)
          Length = 1129

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
 Frame = +1

Query: 76  NLM*PNRISQFISARLYRSPSLQTPSPESTVTLASGCTSCSHEAPLMRIVAPERRTT-SA 252
           ++M PNR S  +       P LQT  P+S+   A    S  HE P  +   P R  + + 
Sbjct: 407 SMMVPNRNSHNMELYNINVPGLQTAWPQSSSAPAQSSPSGGHEIPTWQPNIPVRSNSFNN 466

Query: 253 PIDRERSRT--RMPEARRLTSV 312
           P+    S +    P A  +T++
Sbjct: 467 PLGSRASHSANSQPSATTVTAI 488



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>MEL_ZYGCI (Q99172) Alpha-galactosidase precursor (EC 3.2.1.22) (Melibiase)|
           (Alpha-D-galactoside galactohydrolase)
          Length = 469

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = -1

Query: 403 GGLEVWAGPLSGNRKAVVLWNRQGYQATITAHWSNV 296
           G +++W+GPL      V L N    + ++ A W+++
Sbjct: 340 GEIQLWSGPLDNGDHVVALLNGGNNERSMNASWNDI 375



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>SYI_MYCPN (P75258) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA|
           ligase) (IleRS)
          Length = 861

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 22/73 (30%), Positives = 32/73 (43%)
 Frame = -1

Query: 346 WNRQGYQATITAHWSNVGLPASASVTARDLWAHSSFSAQGQLSASVGPHDCKMYILTPK* 167
           WN QG+       W   GLP   +V+ +D   ++S      LS S     CK + L+   
Sbjct: 81  WNLQGFGTVFIPGWDCHGLPIEHAVSKKDPQHYAS------LSLSEKRDLCKQFALSQ-- 132

Query: 166 L*IQGKGFARKGI 128
           + IQ   F R G+
Sbjct: 133 IAIQKAQFQRLGL 145



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>TRZA_RHOCO (Q52725) S-triazine hydrolase (EC 3.8.1.-) (N-ethylammeline|
           chlorohydrolase)
          Length = 476

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 11/51 (21%)
 Frame = +1

Query: 130 SPSLQTPSPES-----------TVTLASGCTSCSHEAPLMRIVAPERRTTS 249
           SP+  TP+P S           T T ++GCT+CS  A L     P + TTS
Sbjct: 57  SPASSTPTPTSHKSSSGVVHPMTATSSNGCTTCSIPASL-----PTQTTTS 102



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>MP2K1_XENLA (Q05116) Dual specificity mitogen-activated protein kinase kinase 1|
           (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK 1) (ERK
           activator kinase 1) (MAPK/ERK kinase 1) (MEK1)
          Length = 394

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +1

Query: 340 CSIERPPFCCR*AVRPRPPNR 402
           CS+ER P     A RPRPP R
Sbjct: 276 CSVERDPASSELAPRPRPPGR 296



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>RSV1_SCHPO (Q9P7D9) DNA-binding protein rsv1|
          Length = 428

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +1

Query: 73  SNLM*PNRISQFISARLYRSPSLQTPSPESTVTLASGCTSCSHEAP 210
           SNL+ PN+    + + +   P+L+ PS  S  T  S   +  H AP
Sbjct: 378 SNLISPNQTFNPVKSSVKALPTLEPPSSPSHATATSSLHTLFHTAP 423



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>ARI1B_HUMAN (Q8NFD5) AT-rich interactive domain-containing protein 1B (ARID|
           domain-containing protein 1B) (Osa homolog 2) (hOsa2)
           (p250R) (BRG1-binding protein hELD/OSA1)
           (BRG1-associated factor 250b) (BAF250B)
          Length = 2236

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
 Frame = -2

Query: 363 ERRSFYGTGRGT----RQPSPHTGQTSGFRHPRP*PLAIYGRTRRSPLRGNYPHQ 211
           +R   YG G       +Q SP+ G + G   P+  P+ I GRT  +     YP Q
Sbjct: 524 KRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQ 578



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>CP19A_ORENI (P70091) Cytochrome P450 19A1 (EC 1.14.14.1) (Aromatase) (CYPXIX)|
           (Estrogen synthetase) (P-450AROM)
          Length = 522

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 10/38 (26%), Positives = 21/38 (55%)
 Frame = +1

Query: 166 VTLASGCTSCSHEAPLMRIVAPERRTTSAPIDRERSRT 279
           VTL S  + C+HE P++  +      +  P++ +++ T
Sbjct: 462 VTLLSQYSVCTHEGPILDCLPQTNNLSQQPVEHQQAET 499



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>CWC22_NEUCR (Q7RX84) Pre-mRNA-splicing factor cwc-22|
          Length = 1010

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 5/58 (8%)
 Frame = +1

Query: 124 YRSPSLQTPSPESTVTLASGCTSCSH-----EAPLMRIVAPERRTTSAPIDRERSRTR 282
           YRSP  +TPSP      +       H      +P  R  +P RR+  +P  R+ S  R
Sbjct: 53  YRSPGERTPSPSPRRDRSLSPRDQPHSHPRSRSPTPRSQSPSRRSVRSPSPRQGSPAR 110



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>RRPL_UUK (P33453) RNA-directed RNA polymerase (EC 2.7.7.48) (L protein)|
          Length = 2103

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = +1

Query: 262  RERSRTRMPEARRLTSVR*WLPGTPACSIERPPF 363
            R   RT   E   LTSV  WL G P+ ++E  PF
Sbjct: 1538 RMTPRTFKEEWENLTSVFPWLTGNPSETLELSPF 1571



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>CPB3_CAEEL (O01835) Cytoplasmic polyadenylation element-binding protein 3|
          Length = 751

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
 Frame = +1

Query: 145 TPSPESTVT---LASGCTSCSHEAPLMRI-VAPERRTTSAPIDRERSRTRMPEARRLTSV 312
           TPSP + +    + S  TS  H     R+ +    RTT   ID ER+  R   ARRL   
Sbjct: 106 TPSPANRLLKKIVPSRRTSTEHPNSSNRMHIFGSSRTTKKSIDSERNSQRKKSARRLNFE 165

Query: 313 R 315
           R
Sbjct: 166 R 166



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>YPCB_ECOLI (P04481) Hypothetical protein in cib 5'region (Fragment)|
          Length = 216

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
 Frame = +1

Query: 241 TTSAPIDRERSRTRMPEARRLTSVR*WL---PGTPACSIERPPF 363
           T   P+D +  R  +     L +V  WL   PGTP  S+ERP F
Sbjct: 88  TCPVPVDSKLERNTLTA---LLNVASWLKRKPGTPELSLERPLF 128



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>DCMC_RAT (Q920F5) Malonyl-CoA decarboxylase, mitochondrial precursor (EC|
           4.1.1.9) (MCD)
          Length = 492

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = -3

Query: 398 FGGLGRTAQRQQKGGRSMEQAGVPGNHHRTLVKRRASGIRVRDRSRSMGALV 243
           +GGL   AQR +  GR  +  GV    H  + ++ A  +++R +SR    L+
Sbjct: 74  YGGLAEAAQRAELLGRLAQGFGV---DHGQVAEQSAGVLQLRQQSREAAVLL 122



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>MEL_TORDE (Q9UVD6) Alpha-galactosidase precursor (EC 3.2.1.22) (Melibiase)|
           (Alpha-D-galactoside galactohydrolase) (MELt)
          Length = 474

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 14/59 (23%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
 Frame = -1

Query: 403 GGLEVWAGPLSGNRKAVVLWNRQGYQATITAHWSNVGLPA-------SASVTARDLWAH 248
           G +++W+GPL    + V L N    +  + A+  ++ + +       S++    DLWA+
Sbjct: 342 GEVQLWSGPLDNGDRVVALLNGGAKERPMVAYLEDIFIDSFVGSEELSSTWNVYDLWAN 400



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>SYTL2_MOUSE (Q99N50) Synaptotagmin-like protein 2 (Exophilin-4)|
          Length = 950

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 14/84 (16%)
 Frame = +1

Query: 94  RISQFISARLYRSPSLQTPSPESTVTLASGCTSCSHEA--------------PLMRIVAP 231
           R + F S +L    SLQ   PE + T  +G    S E               P  ++  P
Sbjct: 158 RKNPFNSPKLPEDHSLQQTKPEQSKTGKAGLFQISKEGELSESKEKSSIPDMPRQQLEKP 217

Query: 232 ERRTTSAPIDRERSRTRMPEARRL 303
           ++  ++ P +   ++  +P+AR+L
Sbjct: 218 KQTVSTEPENASHTKAPIPKARKL 241



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>FPG_DECAR (Q479M6) Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)|
           (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic
           site) lyase mutM) (EC 4.2.99.18) (AP lyase mutM)
          Length = 276

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 19/61 (31%), Positives = 25/61 (40%)
 Frame = +1

Query: 88  PNRISQFISARLYRSPSLQTPSPESTVTLASGCTSCSHEAPLMRIVAPERRTTSAPIDRE 267
           P    Q I   + R+P L+   P +  TL  GC          R+VA  RR     +D E
Sbjct: 15  PELAGQVIQGVVIRAPKLRHEIPPALATLLPGC----------RVVAVRRRGKYLLLDCE 64

Query: 268 R 270
           R
Sbjct: 65  R 65



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>OMPA_RICRI (P15921) Outer membrane protein A precursor (190 kDa antigen) (Cell|
            surface antigen) (rOmpA) (rOmp A)
          Length = 2249

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 11/52 (21%)
 Frame = -3

Query: 272  DRSRSMGALVVLRSGATIRISGAS*L-----------QDVHPDAKVTVDSGE 150
            D +   G  ++++SG+T+ +SG S L            ++ PD K TV S E
Sbjct: 1758 DGAAKSGGNILIKSGSTLDLSGVSTLALVVTATNFDMNNISPDTKYTVISAE 1809



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>TF7L1_MOUSE (Q9Z1J1) Transcription factor 7-like 1 (HMG box transcription|
           factor 3) (TCF-3) (mTCF-3)
          Length = 584

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = +2

Query: 89  RIAFLNSSQLGSIDPLPCKPLPL 157
           + A  NSSQ+GS  PL  +PLPL
Sbjct: 522 KAAASNSSQMGSQPPLLSRPLPL 544



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>ILV1_MAIZE (Q41768) Acetolactate synthase 1, chloroplast precursor (EC|
           2.2.1.6) (Acetohydroxy-acid synthase 1)
          Length = 638

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = +1

Query: 169 TLASGCTSCSHEAPLMRIVAPERRTTSAPIDRERSRTRMPEARRLTSVR*WLPGTP 336
           T  +G T+ + +A     +   RR  +API    +   MP A   T +R W P  P
Sbjct: 9   TALTGATTAAPKARRRAHLLATRRALAAPIRCSAASPAMPMAPPATPLRPWGPTDP 64



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>FPG_GLOVI (Q7NFW7) Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)|
           (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic
           site) lyase mutM) (EC 4.2.99.18) (AP lyase mutM)
          Length = 283

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 28/81 (34%), Positives = 38/81 (46%)
 Frame = +2

Query: 149 LPLNLQLLWRQDVHLAVMRPH*CG*LPLSGERRVRP*IASGHGRGCRKPDV*PVCGDGCL 328
           L ++ +LLWR            CG  PL    RVR  +ASGH    R  D+  V G   L
Sbjct: 76  LRMSGRLLWR------------CGEAPLEPHTRVRIPMASGH--ELRFEDM-RVFGRLWL 120

Query: 329 VPLPVP*NDRLSVAAERSGPD 391
           +P+ VP  +R+     R GP+
Sbjct: 121 IPVGVP-PERVMGGLTRLGPE 140



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>OMPA_RICCN (Q52657) Outer membrane protein A precursor (190 kDa antigen) (Cell|
            surface antigen) (rOmpA) (rOmp A)
          Length = 2021

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 11/52 (21%)
 Frame = -3

Query: 272  DRSRSMGALVVLRSGATIRISGAS*L-----------QDVHPDAKVTVDSGE 150
            D +   G  ++++SG+T+ +SG S L            ++ PD K TV S E
Sbjct: 1530 DGAAKSGGNILIKSGSTLDLSGVSNLALVVTATNFDMNNISPDTKYTVISAE 1581



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>GLE1_MOUSE (Q8R322) Nucleoporin GLE1 (GLE1-like protein)|
          Length = 699

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
 Frame = +1

Query: 91  NRISQFISARLYRSPSLQTP---SPESTVTLASGCTSCSHEAPLMRIVAPE 234
           N  S   ++ LY+S  L++P   SP+S    +   T  +HE+P    +AP+
Sbjct: 73  NSPSSGSASGLYQSSLLKSPVRSSPQSPSPSSPNGTQSTHESPFTEPIAPQ 123



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>Y4GI_RHISN (P55465) Hypothetical protein y4gI|
          Length = 909

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = -2

Query: 396 WRSGPDRSAATERRSFYGTGRGTRQPSPHTGQTSG 292
           WR+ P  +AA+ R   Y    G R    H  +T+G
Sbjct: 567 WRATPGSAAASNRAKPYANEAGRRALEEHLARTTG 601


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,417,160
Number of Sequences: 219361
Number of extensions: 1311881
Number of successful extensions: 3741
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 3583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3737
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 1359926328
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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