ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd16l08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CP11A_CAPHI (P79153) Cytochrome P450 11A1, mitochondrial precurs... 29 3.6
2CP11A_BOVIN (P00189) Cytochrome P450 11A1, mitochondrial precurs... 29 3.6
3CP11A_SHEEP (P79202) Cytochrome P450 11A1, mitochondrial precurs... 28 4.7
4FA23A_HUMAN (Q5W0B7) Protein FAM23A 28 6.2
5FA23B_HUMAN (Q5VSJ3) Protein FAM23B 28 6.2
6ECTA_OCEIH (Q8ESU9) L-2,4-diaminobutyric acid acetyltransferase ... 28 8.1

>CP11A_CAPHI (P79153) Cytochrome P450 11A1, mitochondrial precursor (EC|
           1.14.15.6) (CYPXIA1) (P450(scc)) (Cholesterol side-chain
           cleavage enzyme) (Cholesterol desmolase)
          Length = 520

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 11/56 (19%)
 Frame = +2

Query: 77  PPILGTQAESYGNHHHRTSLXYIHTVGTGTCRP-----------WCEYYFSWKRKT 211
           PP+L T  E +G  HHR        + T T RP           W   Y  W++K+
Sbjct: 17  PPLLNTGREGWG--HHRVGTGEGAGISTRTPRPYSEIPSPGDNGWINLYHFWRKKS 70



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>CP11A_BOVIN (P00189) Cytochrome P450 11A1, mitochondrial precursor (EC|
           1.14.15.6) (CYPXIA1) (P450(scc)) (Cholesterol side-chain
           cleavage enzyme) (Cholesterol desmolase)
          Length = 520

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 18/55 (32%), Positives = 21/55 (38%), Gaps = 11/55 (20%)
 Frame = +2

Query: 77  PPILGTQAESYGNHHHRTSLXYIHTVGTGTCRP-----------WCEYYFSWKRK 208
           PPIL T  E +G  HHR        + T T RP           W   Y  W+ K
Sbjct: 17  PPILSTVGEGWG--HHRVGTGEGAGISTKTPRPYSEIPSPGDNGWLNLYHFWREK 69



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>CP11A_SHEEP (P79202) Cytochrome P450 11A1, mitochondrial precursor (EC|
           1.14.15.6) (CYPXIA1) (P450(SCC)) (Cholesterol side-chain
           cleavage enzyme) (Cholesterol desmolase)
          Length = 520

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 17/55 (30%), Positives = 22/55 (40%), Gaps = 11/55 (20%)
 Frame = +2

Query: 77  PPILGTQAESYGNHHHRTSLXYIHTVGTGTCRP-----------WCEYYFSWKRK 208
           PP+L T  E +G  HHR        + T T RP           W   Y  W++K
Sbjct: 17  PPLLNTGREGWG--HHRVGTGEGAGISTRTPRPYSEIPSPGDNGWINLYHFWRKK 69



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>FA23A_HUMAN (Q5W0B7) Protein FAM23A|
          Length = 351

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +2

Query: 32  LMGWIVVYKHTXISVPPILGTQAESYGNHHHRTSLXYIHTV 154
           L+  I+V     + + P+ G+Q  S   H H TSL +I TV
Sbjct: 135 LLSLIMVDIIEKLRIYPLRGSQKSSENGHIHSTSLQHIKTV 175



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>FA23B_HUMAN (Q5VSJ3) Protein FAM23B|
          Length = 274

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +2

Query: 32  LMGWIVVYKHTXISVPPILGTQAESYGNHHHRTSLXYIHTV 154
           L+  I+V     + + P+ G+Q  S   H H TSL +I TV
Sbjct: 135 LLSLIMVDIIEKLRIYPLRGSQKSSENGHIHSTSLQHIKTV 175



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>ECTA_OCEIH (Q8ESU9) L-2,4-diaminobutyric acid acetyltransferase (EC 2.3.1.-)|
           (DABA acetyltransferase)
          Length = 179

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 10/29 (34%), Positives = 20/29 (68%)
 Frame = +3

Query: 144 YIQXVQAPADRGANIIFLGKEKRXYTNXK 230
           +I+   AP+++ +N +FLG  ++ +TN K
Sbjct: 114 FIEATVAPSNKPSNYLFLGLARKIHTNWK 142


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,584,766
Number of Sequences: 219361
Number of extensions: 523027
Number of successful extensions: 892
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 892
length of database: 80,573,946
effective HSP length: 62
effective length of database: 66,973,564
effective search space used: 1607365536
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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