>gb|AY863051.1| Zea mays putative methyl-binding domain protein MBD115 mRNA, complete
            cds
          Length = 1456

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                        
Query: 167  gcgctgtcgggttaaacacgcttacagtcctcaaagcaaatgcg 210
            |||||||| |||||| |||| ||||| | |||||||||||||||
Sbjct: 1209 gcgctgtcaggttaaccacgattacaattctcaaagcaaatgcg 1166

>gb|AY108379.1| Zea mays PCO146110 mRNA sequence
          Length = 762

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 167 gcgctgtcgggttaaacacgcttacagtcctcaaagcaaatgcg 210
           |||||||| |||||| |||| ||||| | |||||||||||||||
Sbjct: 453 gcgctgtcaggttaaccacgattacaattctcaaagcaaatgcg 410

>emb|AL808011.11| Mouse DNA sequence from clone RP23-32O21 on chromosome 4, complete
             sequence
          Length = 147327

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 1     cagtagcataagtattatgtctgtgt 26
             |||| |||||||||||||||||||||
Sbjct: 60269 cagtggcataagtattatgtctgtgt 60244

>ref|XM_590415.2| PREDICTED: Bos taurus similar to HEF-like protein (LOC512832), mRNA
          Length = 2358

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 95   cctgccgccctgcagcacctc 115
            |||||||||||||||||||||
Sbjct: 2278 cctgccgccctgcagcacctc 2298

>gb|AC165154.2| Mus musculus BAC clone RP23-302C3 from chromosome 14, complete sequence
          Length = 225721

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 219   tcctaagcacacagagaccaagttt 243
             |||||||||||||||||||| ||||
Sbjct: 98805 tcctaagcacacagagaccatgttt 98829

>ref|NM_152506.1| Homo sapiens chromosome 21 open reading frame 129 (C21orf129), mRNA
          Length = 2033

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 88   aagccagcctgccgccctgc 107
            ||||||||||||||||||||
Sbjct: 1298 aagccagcctgccgccctgc 1279

>emb|AL592285.7| Human DNA sequence from clone RP11-153I22 on chromosome 1 Contains part
             of the PDE4B gene for phosphodiesterase 4B, cAMP-specific
             (phosphodiesterase E4 dunce homolog, Drosophila), complete
             sequence
          Length = 152113

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 57    ttacaaatgataataatgac 76
             ||||||||||||||||||||
Sbjct: 38256 ttacaaatgataataatgac 38275

>emb|AL731861.9| Zebrafish DNA sequence from clone BUSM1-46I22 in linkage group 19,
             complete sequence
          Length = 87662

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 54    aagttacaaatgataataat 73
             ||||||||||||||||||||
Sbjct: 64162 aagttacaaatgataataat 64143

>dbj|AK057397.1| Homo sapiens cDNA FLJ32835 fis, clone TESTI2003255
          Length = 2033

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 88   aagccagcctgccgccctgc 107
            ||||||||||||||||||||
Sbjct: 1298 aagccagcctgccgccctgc 1279

>gb|AY186604.1| Helianthus annuus TIR-NBS-LRR resistance gene candidate protein
           RGC1.2 gene, partial cds
          Length = 431

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 57  ttacaaatgataataatgac 76
           ||||||||||||||||||||
Sbjct: 181 ttacaaatgataataatgac 200

>dbj|BS000130.1| Pan troglodytes chromosome 22 clone:CH251-010A09, map 22, complete
              sequences
          Length = 201997

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 88     aagccagcctgccgccctgc 107
              ||||||||||||||||||||
Sbjct: 125313 aagccagcctgccgccctgc 125332

>emb|AL591593.11| Zebrafish DNA sequence from clone BUSM1-211O13, complete sequence
          Length = 121251

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 54     aagttacaaatgataataat 73
              ||||||||||||||||||||
Sbjct: 118469 aagttacaaatgataataat 118488

>dbj|AP001743.1| Homo sapiens genomic DNA, chromosome 21q, section 87/105
          Length = 219256

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 88     aagccagcctgccgccctgc 107
              ||||||||||||||||||||
Sbjct: 125895 aagccagcctgccgccctgc 125914

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 97     tgccgccctgcagcacctcg 116
              ||||||||||||||||||||
Sbjct: 922648 tgccgccctgcagcacctcg 922667

>dbj|AP006703.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT01O03, TM0588b,
            complete sequence
          Length = 45450

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 143  gagaagagaagcctacaatt 162
            ||||||||||||||||||||
Sbjct: 6331 gagaagagaagcctacaatt 6312

>dbj|AP004545.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT26E16, TM0103,
             complete sequence
          Length = 100595

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 143   gagaagagaagcctacaatt 162
             ||||||||||||||||||||
Sbjct: 51036 gagaagagaagcctacaatt 51017

>dbj|AP001615.1| Homo sapiens genomic DNA, chromosome 21, clone:KB657H6, MX1-D21S171
             region, complete sequence
          Length = 124516

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 88    aagccagcctgccgccctgc 107
             ||||||||||||||||||||
Sbjct: 65967 aagccagcctgccgccctgc 65986


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,839,247
Number of Sequences: 3902068
Number of extensions: 2839247
Number of successful extensions: 53220
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53174
Number of HSP's gapped (non-prelim): 46
length of query: 405
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 383
effective length of database: 17,147,199,772
effective search space: 6567377512676
effective search space used: 6567377512676
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)