ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd17a05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1I20RA_HUMAN (Q9UHF4) Interleukin-20 receptor alpha chain precurs... 28 5.4

>I20RA_HUMAN (Q9UHF4) Interleukin-20 receptor alpha chain precursor|
           (IL-20R-alpha) (IL-20R1) (Cytokine receptor family 2
           member 8) (Cytokine receptor class-II member 8) (CRF2-8)
           (ZcytoR7)
          Length = 553

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 17/64 (26%), Positives = 31/64 (48%)
 Frame = +2

Query: 80  QCSRAIPIQSSQGTVRHKFIYMTLN*VHFFVYKIML*IVHSYTQQSREAEPSRLSQVCLS 259
           QC+R +  QSS+   +  F Y+    +  F++ +M   ++ Y    +E  P+      L 
Sbjct: 235 QCARTLKDQSSEFKAKIIFWYVLPISITVFLFSVMGYSIYRYIHVGKEKHPAN-----LI 289

Query: 260 LVYG 271
           L+YG
Sbjct: 290 LIYG 293


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,756,449
Number of Sequences: 219361
Number of extensions: 776112
Number of successful extensions: 1153
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1153
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 1396778976
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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