ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd16l05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009545.1| Triticum aestivum clone wr1.pk148.e12:fis, full i... 563 e-157
2ref|XM_470138.1| Oryza sativa (japonica cultivar-group), mRNA 103 6e-19
3dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clon... 103 6e-19
4dbj|AK058941.1| Oryza sativa (japonica cultivar-group) cDNA clon... 103 6e-19
5gb|AY542311.1| Sorghum bicolor clone SB20O07 b1-1, b1-2, putativ... 96 2e-16
6ref|XM_470137.1| Oryza sativa (japonica cultivar-group), mRNA 78 4e-11
7gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 78 4e-11
8dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 78 4e-11
9gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic ... 78 4e-11
10ref|XM_473455.1| Oryza sativa (japonica cultivar-group), predic... 74 6e-10
11emb|X80820.1|ZMABP1F Z.mays ABP1 mRNA for actin-depolymerizing f... 74 6e-10
12dbj|AK069329.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 6e-10
13gb|AY112267.1| Zea mays CL5157_2 mRNA sequence 74 6e-10
14gb|AY104025.1| Zea mays PCO095832 mRNA sequence 74 6e-10
15emb|X97726.1|ZMABP3 Z.mays ZmABP3 mRNA for actin depolymerizing ... 72 2e-09
16emb|X97725.1|ZMABP2 Z.mays ZmABP2 mRNA for actin depolymerizing ... 72 2e-09
17gb|BT016543.1| Zea mays clone Contig376 mRNA sequence 64 6e-07
18gb|BT018082.1| Zea mays clone EL01N0552A09.c mRNA sequence 64 6e-07
19gb|AY103749.1| Zea mays PCO115125 mRNA sequence 64 6e-07
20emb|AL606647.3|OSJN00096 Oryza sativa genomic DNA, chromosome 4,... 62 2e-06
21dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
22ref|XM_478113.1| Oryza sativa (japonica cultivar-group), mRNA 58 3e-05
23dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
24dbj|AP005465.5| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
25dbj|AK072662.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 3e-05
26dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
27dbj|AP004037.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
28dbj|AK069605.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
29gb|U58278.1|TAU58278 Triticum aestivum actin-binding protein WCO... 48 0.033
30gb|AY109068.1| Zea mays PCO068743 mRNA sequence 46 0.13
31gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 44 0.52
32gb|AC135102.16| Medicago truncatula clone mth2-8m3, complete seq... 44 0.52
33gb|AC115883.13| Mus musculus chromosome 3, clone RP24-376N4, com... 42 2.0
34ref|XM_811053.1| Trypanosoma cruzi strain CL Brener hypothetical... 42 2.0
35ref|NM_173884.2| Bos taurus tyrosine hydroxylase (TH), mRNA 40 8.1
36gb|AC124549.5| Mus musculus BAC clone RP23-284E24 from 13, compl... 40 8.1
37gb|AC090208.4| Homo sapiens chromosome 18, clone RP11-660C14, co... 40 8.1
38gb|AC090340.6| Homo sapiens chromosome 18, clone RP11-714M23, co... 40 8.1
39dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, co... 40 8.1
40gb|AC068907.53| Mus musculus strain C57BL/6J clone rp23-347f7 ma... 40 8.1
41gb|AF195612.1|AF195612 Lophopyrum elongatum actin depolymerizati... 40 8.1
42gb|AF196350.1|AF196350 Lophopyrum elongatum actin depolymerizati... 40 8.1
43gb|AC005297.1| Homo sapiens X BAC GS1-466O4 (Roswell Park Cancer... 40 8.1
44gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome 40 8.1
45emb|BX072552.10| Mouse DNA sequence from clone RP23-147I24 on ch... 40 8.1
46emb|BX004970.8| Zebrafish DNA sequence from clone DKEY-9I4, comp... 40 8.1
47emb|AL954307.7| Zebrafish DNA sequence from clone CH211-201C19, ... 40 8.1
48gb|AC003971.1|AC003971 Human BAC 367D17 from chromosome 18, comp... 40 8.1
49emb|AL626775.11| Mouse DNA sequence from clone RP23-325M14 on ch... 40 8.1
50gb|M36705.1|BOVTYRHAA Bovine tyrosine hydroxylase mRNA, complete... 40 8.1
51gb|M36794.1|BOVTHA Bovine tyrosine hydroxylase mRNA, complete cds 40 8.1 
>gb|BT009545.1| Triticum aestivum clone wr1.pk148.e12:fis, full insert mRNA
           sequence
          Length = 2114

 Score =  563 bits (284), Expect = e-157
 Identities = 323/336 (96%)
 Strand = Plus / Plus

                                                                       
Query: 250 tagtgtgcgcgctccttgatcacgtccaggctgatttcgctggggtcggtggcctgcatc 309
           ||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 288 tagtgcgcgcgctccttgatcacgtcgaggctcatttcgctggggtcggtggcctgcatc 347

                                                                       
Query: 310 tcgatctggatgccgtccagggtcctcttgaacttctcgttggtgcttgcgtacgtcatc 369
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 348 tcgatctggatgccgtccagggtcctcttgaacttctcgttggtgctcgcgtacgtcatc 407

                                                                       
Query: 370 ttgctcctcacctttgcggtgtctggggaccagaagatatagaagatcctgctctttggc 429
           ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 408 ttgctcctcacctttgccgtgtcgggggaccagaagatatagaagatcctgctctttggc 467

                                                                       
Query: 430 acatcctccggggtggtgaagtcgaagtcaaacactgcgaatcggcagtcgttttcaggg 489
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 468 acatcctccggggtggtgaagtcgaagtcaaacactgcgaatcggcagtcgttctcaggg 527

                                                                       
Query: 490 agggtcttggtgaaatcctcataggtggcatcgcgctgcccggtttggtccacaatgacc 549
           |||||||||||||| ||||||||||| || || |||| ||| ||||||||||||||||||
Sbjct: 528 agggtcttggtgaagtcctcataggttgcctcacgctccccagtttggtccacaatgacc 587

                                               
Query: 550 tccttctggttctccagcctgtaggttatgaagcgg 585
           ||||||||||||||||||||||||||||||||||||
Sbjct: 588 tccttctggttctccagcctgtaggttatgaagcgg 623



 Score =  145 bits (73), Expect = 2e-31
 Identities = 76/77 (98%)
 Strand = Plus / Plus

                                                                       
Query: 108 ctttcgacacggtaacaaagccacaaatcatcaagaaagtttcaagagtcacaccgccaa 167
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 ctttcgacacggtaacaaagccacaaatcatcaagaaagtttcaagagtcacaccgccaa 237

                            
Query: 168 atctataattgacataa 184
           ||||||| |||||||||
Sbjct: 238 atctatatttgacataa 254



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                               
Query: 1   agtgcagcagcataacgcccggcatataaatgggca 36
           ||||||||||||||| ||||||||||| ||||||||
Sbjct: 75  agtgcagcagcataaggcccggcatatcaatgggca 110
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>ref|XM_470138.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 778

 Score =  103 bits (52), Expect = 6e-19
 Identities = 67/72 (93%)
 Strand = Plus / Minus

                                                                       
Query: 366 catcttgctcctcacctttgcggtgtctggggaccagaagatatagaagatcctgctctt 425
           ||||||||||||||| |||||  ||||||||||||| ||||||||||| |||||||||||
Sbjct: 438 catcttgctcctcacttttgcattgtctggggaccataagatatagaatatcctgctctt 379

                       
Query: 426 tggcacatcctc 437
           ||||||||||||
Sbjct: 378 tggcacatcctc 367



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 574 gttatgaagcggtgcatcct 593
           ||||||||||||||||||||
Sbjct: 227 gttatgaagcggtgcatcct 208
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>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full
            insert sequence
          Length = 2390

 Score =  103 bits (52), Expect = 6e-19
 Identities = 67/72 (93%)
 Strand = Plus / Minus

                                                                        
Query: 366  catcttgctcctcacctttgcggtgtctggggaccagaagatatagaagatcctgctctt 425
            ||||||||||||||| |||||  ||||||||||||| ||||||||||| |||||||||||
Sbjct: 2047 catcttgctcctcacttttgcattgtctggggaccataagatatagaatatcctgctctt 1988

                        
Query: 426  tggcacatcctc 437
            ||||||||||||
Sbjct: 1987 tggcacatcctc 1976



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 574  gttatgaagcggtgcatcct 593
            ||||||||||||||||||||
Sbjct: 1836 gttatgaagcggtgcatcct 1817
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>dbj|AK058941.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-H02, full
           insert sequence
          Length = 758

 Score =  103 bits (52), Expect = 6e-19
 Identities = 67/72 (93%)
 Strand = Plus / Minus

                                                                       
Query: 366 catcttgctcctcacctttgcggtgtctggggaccagaagatatagaagatcctgctctt 425
           ||||||||||||||| |||||  ||||||||||||| ||||||||||| |||||||||||
Sbjct: 420 catcttgctcctcacttttgcattgtctggggaccataagatatagaatatcctgctctt 361

                       
Query: 426 tggcacatcctc 437
           ||||||||||||
Sbjct: 360 tggcacatcctc 349



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 574 gttatgaagcggtgcatcct 593
           ||||||||||||||||||||
Sbjct: 209 gttatgaagcggtgcatcct 190
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>gb|AY542311.1| Sorghum bicolor clone SB20O07 b1-1, b1-2, putative genetic modifier,
              hypothetical protein, putative NAM protein, putative
              cis-zeatin O-glucosyltransferases, putative small nuclear
              ribonucleoprotein, putative cis-zeatin
              O-glucosyltransferase, putative glutathione peroxidase,
              putative copper-exporting ATPases, putative
              serine/threonine dehydratase, and putative actin
              depolymerizing factor genes, complete cds; and hypothetical
              protein gene, partial cds
          Length = 157237

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 108/128 (84%)
 Strand = Plus / Minus

                                                                          
Query: 273    gtccaggctgatttcgctggggtcggtggcctgcatctcgatctggatgccgtccagggt 332
              ||||| ||| || |||||||||||||||||||||| ||| | |||||||||||||||   
Sbjct: 148416 gtccatgctcatctcgctggggtcggtggcctgcagctccacctggatgccgtccagctc 148357

                                                                          
Query: 333    cctcttgaacttctcgttggtgcttgcgtacgtcatcttgctcctcacctttgcggtgtc 392
              ||||||||||   || |||| ||| ||||||  |||||||||||||||||| | ||||||
Sbjct: 148356 cctcttgaaccggtccttggagctcgcgtacagcatcttgctcctcaccttcgaggtgtc 148297

                      
Query: 393    tggggacc 400
               |||||||
Sbjct: 148296 cggggacc 148289
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>ref|XM_470137.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 703

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 99/119 (83%)
 Strand = Plus / Minus

                                                                       
Query: 262 tccttgatcacgtccaggctgatttcgctggggtcggtggcctgcatctcgatctggatg 321
           ||||||| |||||| ||| |||  ||||||||||||||||||||||  |||||||||| |
Sbjct: 533 tccttgagcacgtcgagggtgagctcgctggggtcggtggcctgcaggtcgatctggacg 474

                                                                      
Query: 322 ccgtccagggtcctcttgaacttctcgttggtgcttgcgtacgtcatcttgctcctcac 380
           ||||| ||   | ||||||||   ||||||| ||| ||||||  |||||||||||||||
Sbjct: 473 ccgtcgagctccttcttgaacccttcgttggagctcgcgtacaccatcttgctcctcac 415
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 99/119 (83%)
 Strand = Plus / Minus

                                                                            
Query: 262      tccttgatcacgtccaggctgatttcgctggggtcggtggcctgcatctcgatctggatg 321
                ||||||| |||||| ||| |||  ||||||||||||||||||||||  |||||||||| |
Sbjct: 34127301 tccttgagcacgtcgagggtgagctcgctggggtcggtggcctgcaggtcgatctggacg 34127242

                                                                           
Query: 322      ccgtccagggtcctcttgaacttctcgttggtgcttgcgtacgtcatcttgctcctcac 380
                ||||| ||   | ||||||||   ||||||| ||| ||||||  |||||||||||||||
Sbjct: 34127241 ccgtcgagctccttcttgaacccttcgttggagctcgcgtacaccatcttgctcctcac 34127183



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                        
Query: 398      accagaagatatagaagatcctgctctttggcacatcctc 437
                |||| ||||||||||| |||||||||||||||||||||||
Sbjct: 34129842 accataagatatagaatatcctgctctttggcacatcctc 34129803



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                   
Query: 366      catcttgctcctcacctttgcggtgtctggggacc 400
                ||||||||||||||| |||||  ||||||||||||
Sbjct: 34129963 catcttgctcctcacttttgcattgtctggggacc 34129929



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 574      gttatgaagcggtgcatcct 593
                ||||||||||||||||||||
Sbjct: 34129663 gttatgaagcggtgcatcct 34129644
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 99/119 (83%)
 Strand = Plus / Minus

                                                                            
Query: 262      tccttgatcacgtccaggctgatttcgctggggtcggtggcctgcatctcgatctggatg 321
                ||||||| |||||| ||| |||  ||||||||||||||||||||||  |||||||||| |
Sbjct: 34217773 tccttgagcacgtcgagggtgagctcgctggggtcggtggcctgcaggtcgatctggacg 34217714

                                                                           
Query: 322      ccgtccagggtcctcttgaacttctcgttggtgcttgcgtacgtcatcttgctcctcac 380
                ||||| ||   | ||||||||   ||||||| ||| ||||||  |||||||||||||||
Sbjct: 34217713 ccgtcgagctccttcttgaacccttcgttggagctcgcgtacaccatcttgctcctcac 34217655



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                        
Query: 398      accagaagatatagaagatcctgctctttggcacatcctc 437
                |||| ||||||||||| |||||||||||||||||||||||
Sbjct: 34220314 accataagatatagaatatcctgctctttggcacatcctc 34220275



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                   
Query: 366      catcttgctcctcacctttgcggtgtctggggacc 400
                ||||||||||||||| |||||  ||||||||||||
Sbjct: 34220435 catcttgctcctcacttttgcattgtctggggacc 34220401



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 574      gttatgaagcggtgcatcct 593
                ||||||||||||||||||||
Sbjct: 34220135 gttatgaagcggtgcatcct 34220116
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>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete
             sequence
          Length = 163828

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 99/119 (83%)
 Strand = Plus / Minus

                                                                         
Query: 262   tccttgatcacgtccaggctgatttcgctggggtcggtggcctgcatctcgatctggatg 321
             ||||||| |||||| ||| |||  ||||||||||||||||||||||  |||||||||| |
Sbjct: 91113 tccttgagcacgtcgagggtgagctcgctggggtcggtggcctgcaggtcgatctggacg 91054

                                                                        
Query: 322   ccgtccagggtcctcttgaacttctcgttggtgcttgcgtacgtcatcttgctcctcac 380
             ||||| ||   | ||||||||   ||||||| ||| ||||||  |||||||||||||||
Sbjct: 91053 ccgtcgagctccttcttgaacccttcgttggagctcgcgtacaccatcttgctcctcac 90995



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                     
Query: 398   accagaagatatagaagatcctgctctttggcacatcctc 437
             |||| ||||||||||| |||||||||||||||||||||||
Sbjct: 93654 accataagatatagaatatcctgctctttggcacatcctc 93615



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 366   catcttgctcctcacctttgcggtgtctggggacc 400
             ||||||||||||||| |||||  ||||||||||||
Sbjct: 93775 catcttgctcctcacttttgcattgtctggggacc 93741



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 574   gttatgaagcggtgcatcct 593
             ||||||||||||||||||||
Sbjct: 93475 gttatgaagcggtgcatcct 93456
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>ref|XM_473455.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 420

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 124/153 (81%)
 Strand = Plus / Minus

                                                                       
Query: 273 gtccaggctgatttcgctggggtcggtggcctgcatctcgatctggatgccgtccagggt 332
           ||||| ||| || |||||||| ||||| ||||||| ||| | |||||| ||||||||   
Sbjct: 396 gtccatgctcatctcgctgggatcggtcgcctgcagctccacctggatcccgtccagctc 337

                                                                       
Query: 333 cctcttgaacttctcgttggtgcttgcgtacgtcatcttgctcctcacctttgcggtgtc 392
           ||||||||||   || |||| ||| ||||||  |||||||||||||||||| |  |||||
Sbjct: 336 cctcttgaaccggtccttggagctcgcgtacagcatcttgctcctcaccttcgacgtgtc 277

                                            
Query: 393 tggggaccagaagatatagaagatcctgctctt 425
            || |||||| ||||  |||||||| |||||||
Sbjct: 276 cggcgaccaggagatgaagaagatcttgctctt 244
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>emb|X80820.1|ZMABP1F Z.mays ABP1 mRNA for actin-depolymerizing factor
          Length = 589

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 85/101 (84%)
 Strand = Plus / Minus

                                                                       
Query: 277 aggctgatttcgctggggtcggtggcctgcatctcgatctggatgccgtccagggtcctc 336
           ||||| || |||||||||||||||||||| ||||||  |||||||||||||||   ||||
Sbjct: 474 aggctcatctcgctggggtcggtggcctggatctcgcactggatgccgtccagctccctc 415

                                                    
Query: 337 ttgaacttctcgttggtgcttgcgtacgtcatcttgctcct 377
            ||||| | || |||| ||| ||||||  ||||||||||||
Sbjct: 414 ctgaacctgtccttggagctggcgtacagcatcttgctcct 374
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>dbj|AK069329.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023018P16, full
           insert sequence
          Length = 778

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 124/153 (81%)
 Strand = Plus / Minus

                                                                       
Query: 273 gtccaggctgatttcgctggggtcggtggcctgcatctcgatctggatgccgtccagggt 332
           ||||| ||| || |||||||| ||||| ||||||| ||| | |||||| ||||||||   
Sbjct: 482 gtccatgctcatctcgctgggatcggtcgcctgcagctccacctggatcccgtccagctc 423

                                                                       
Query: 333 cctcttgaacttctcgttggtgcttgcgtacgtcatcttgctcctcacctttgcggtgtc 392
           ||||||||||   || |||| ||| ||||||  |||||||||||||||||| |  |||||
Sbjct: 422 cctcttgaaccggtccttggagctcgcgtacagcatcttgctcctcaccttcgacgtgtc 363

                                            
Query: 393 tggggaccagaagatatagaagatcctgctctt 425
            || |||||| ||||  |||||||| |||||||
Sbjct: 362 cggcgaccaggagatgaagaagatcttgctctt 330
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>gb|AY112267.1| Zea mays CL5157_2 mRNA sequence
          Length = 779

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 124/153 (81%)
 Strand = Plus / Plus

                                                                       
Query: 273 gtccaggctgatttcgctggggtcggtggcctgcatctcgatctggatgccgtccagggt 332
           ||||| ||| || |||||||||||||||||||||| ||| | ||||||||| |||||   
Sbjct: 421 gtccatgctcatctcgctggggtcggtggcctgcagctccagctggatgccctccagctc 480

                                                                       
Query: 333 cctcttgaacttctcgttggtgcttgcgtacgtcatcttgctcctcacctttgcggtgtc 392
           ||||||||||   || |||| ||| |||||   |||||||||||| ||| | | ||||||
Sbjct: 481 cctcttgaaccggtccttggagctcgcgtaaagcatcttgctcctgaccctcgaggtgtc 540

                                            
Query: 393 tggggaccagaagatatagaagatcctgctctt 425
            ||||||||| ||||  | |||||| |||||||
Sbjct: 541 cggggaccaggagatgaacaagatcttgctctt 573
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>gb|AY104025.1| Zea mays PCO095832 mRNA sequence
          Length = 894

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 85/101 (84%)
 Strand = Plus / Minus

                                                                       
Query: 277 aggctgatttcgctggggtcggtggcctgcatctcgatctggatgccgtccagggtcctc 336
           ||||| || |||||||||||||||||||| ||||||  |||||||||||||||   ||||
Sbjct: 460 aggctcatctcgctggggtcggtggcctggatctcgcactggatgccgtccagctccctc 401

                                                    
Query: 337 ttgaacttctcgttggtgcttgcgtacgtcatcttgctcct 377
            ||||| | || |||| ||| ||||||  ||||||||||||
Sbjct: 400 ctgaacctgtccttggagctggcgtacagcatcttgctcct 360
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>emb|X97726.1|ZMABP3 Z.mays ZmABP3 mRNA for actin depolymerizing factor
          Length = 801

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 78/92 (84%)
 Strand = Plus / Minus

                                                                       
Query: 334 ctcttgaacttctcgttggtgcttgcgtacgtcatcttgctcctcacctttgcggtgtct 393
           |||||||| |||| ||| | |||||||||   |||||||||| ||||||| |||| |  |
Sbjct: 479 ctcttgaatttctggtttgagcttgcgtaaagcatcttgctcttcaccttggcggaggat 420

                                           
Query: 394 ggggaccagaagatatagaagatcctgctctt 425
           |||||||| | |||||||||||||||||||||
Sbjct: 419 ggggaccataggatatagaagatcctgctctt 388
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>emb|X97725.1|ZMABP2 Z.mays ZmABP2 mRNA for actin depolymerizing factor
          Length = 546

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 84/100 (84%)
 Strand = Plus / Minus

                                                                       
Query: 277 aggctgatttcgctggggtcggtggcctgcatctcgatctggatgccgtccagggtcctc 336
           ||||| || |||||||||||||||||||| ||||||  |||||||||||||||   ||||
Sbjct: 411 aggctcatctcgctggggtcggtggcctggatctcgcactggatgccgtccagctccctc 352

                                                   
Query: 337 ttgaacttctcgttggtgcttgcgtacgtcatcttgctcc 376
            ||||| | || |||| ||| ||||||  |||||||||||
Sbjct: 351 ctgaacctgtccttggagctggcgtacagcatcttgctcc 312
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>gb|BT016543.1| Zea mays clone Contig376 mRNA sequence
          Length = 881

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 53/60 (88%)
 Strand = Plus / Minus

                                                                       
Query: 366 catcttgctcctcacctttgcggtgtctggggaccagaagatatagaagatcctgctctt 425
           |||||||||| ||||||| |||| |  ||||||||| | |||||||||||||||||||||
Sbjct: 473 catcttgctcttcaccttggcggaggatggggaccataggatatagaagatcctgctctt 414
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>gb|BT018082.1| Zea mays clone EL01N0552A09.c mRNA sequence
          Length = 837

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 53/60 (88%)
 Strand = Plus / Minus

                                                                       
Query: 366 catcttgctcctcacctttgcggtgtctggggaccagaagatatagaagatcctgctctt 425
           |||||||||| ||||||| |||| |  ||||||||| | |||||||||||||||||||||
Sbjct: 446 catcttgctcttcaccttggcggaggatggggaccataggatatagaagatcctgctctt 387
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>gb|AY103749.1| Zea mays PCO115125 mRNA sequence
          Length = 965

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 53/60 (88%)
 Strand = Plus / Minus

                                                                       
Query: 366 catcttgctcctcacctttgcggtgtctggggaccagaagatatagaagatcctgctctt 425
           |||||||||| ||||||| |||| |  ||||||||| | |||||||||||||||||||||
Sbjct: 496 catcttgctcttcaccttggcggaggatggggaccataggatatagaagatcctgctctt 437
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>emb|AL606647.3|OSJN00096 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0012E24,
             complete sequence
          Length = 127506

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 91/111 (81%)
 Strand = Plus / Plus

                                                                         
Query: 273   gtccaggctgatttcgctggggtcggtggcctgcatctcgatctggatgccgtccagggt 332
             ||||| ||| || |||||||| ||||| ||||||| ||| | |||||| ||||||||   
Sbjct: 61399 gtccatgctcatctcgctgggatcggtcgcctgcagctccacctggatcccgtccagctc 61458

                                                                
Query: 333   cctcttgaacttctcgttggtgcttgcgtacgtcatcttgctcctcacctt 383
             ||||||||||   || |||| ||| ||||||  ||||||||||||||||||
Sbjct: 61459 cctcttgaaccggtccttggagctcgcgtacagcatcttgctcctcacctt 61509
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 91/111 (81%)
 Strand = Plus / Plus

                                                                            
Query: 273      gtccaggctgatttcgctggggtcggtggcctgcatctcgatctggatgccgtccagggt 332
                ||||| ||| || |||||||| ||||| ||||||| ||| | |||||| ||||||||   
Sbjct: 27792729 gtccatgctcatctcgctgggatcggtcgcctgcagctccacctggatcccgtccagctc 27792788

                                                                   
Query: 333      cctcttgaacttctcgttggtgcttgcgtacgtcatcttgctcctcacctt 383
                ||||||||||   || |||| ||| ||||||  ||||||||||||||||||
Sbjct: 27792789 cctcttgaaccggtccttggagctcgcgtacagcatcttgctcctcacctt 27792839
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>ref|XM_478113.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 884

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 83/101 (82%)
 Strand = Plus / Minus

                                                                       
Query: 277 aggctgatttcgctggggtcggtggcctgcatctcgatctggatgccgtccagggtcctc 336
           ||||| || ||||||||||| |||||||| ||||||  |||||| ||||||||   ||||
Sbjct: 463 aggctcatctcgctggggtctgtggcctgaatctcgcactggattccgtccagctccctc 404

                                                    
Query: 337 ttgaacttctcgttggtgcttgcgtacgtcatcttgctcct 377
            ||||| | || |||| ||| ||||||  ||||||||||||
Sbjct: 403 ctgaacctgtccttggagctcgcgtacagcatcttgctcct 363
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 83/101 (82%)
 Strand = Plus / Minus

                                                                            
Query: 277      aggctgatttcgctggggtcggtggcctgcatctcgatctggatgccgtccagggtcctc 336
                ||||| || ||||||||||| |||||||| ||||||  |||||| ||||||||   ||||
Sbjct: 17688290 aggctcatctcgctggggtctgtggcctgaatctcgcactggattccgtccagctccctc 17688231

                                                         
Query: 337      ttgaacttctcgttggtgcttgcgtacgtcatcttgctcct 377
                 ||||| | || |||| ||| ||||||  ||||||||||||
Sbjct: 17688230 ctgaacctgtccttggagctcgcgtacagcatcttgctcct 17688190
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>dbj|AP005465.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1136_F08
          Length = 134988

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 83/101 (82%)
 Strand = Plus / Minus

                                                                         
Query: 277   aggctgatttcgctggggtcggtggcctgcatctcgatctggatgccgtccagggtcctc 336
             ||||| || ||||||||||| |||||||| ||||||  |||||| ||||||||   ||||
Sbjct: 92323 aggctcatctcgctggggtctgtggcctgaatctcgcactggattccgtccagctccctc 92264

                                                      
Query: 337   ttgaacttctcgttggtgcttgcgtacgtcatcttgctcct 377
              ||||| | || |||| ||| ||||||  ||||||||||||
Sbjct: 92263 ctgaacctgtccttggagctcgcgtacagcatcttgctcct 92223
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>dbj|AK072662.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134C12, full
           insert sequence
          Length = 884

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 83/101 (82%)
 Strand = Plus / Minus

                                                                       
Query: 277 aggctgatttcgctggggtcggtggcctgcatctcgatctggatgccgtccagggtcctc 336
           ||||| || ||||||||||| |||||||| ||||||  |||||| ||||||||   ||||
Sbjct: 463 aggctcatctcgctggggtctgtggcctgaatctcgcactggattccgtccagctccctc 404

                                                    
Query: 337 ttgaacttctcgttggtgcttgcgtacgtcatcttgctcct 377
            ||||| | || |||| ||| ||||||  ||||||||||||
Sbjct: 403 ctgaacctgtccttggagctcgcgtacagcatcttgctcct 363
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 74/90 (82%)
 Strand = Plus / Plus

                                                                            
Query: 292      gggtcggtggcctgcatctcgatctggatgccgtccagggtcctcttgaacttctcgttg 351
                ||||| |||||||||| ||| | |||||||||||||||   ||||||||||   || |||
Sbjct: 26938807 gggtcagtggcctgcagctccacctggatgccgtccagctccctcttgaaccgatccttg 26938866

                                              
Query: 352      gtgcttgcgtacgtcatcttgctcctcacc 381
                | ||| || |||  ||||||||||||||||
Sbjct: 26938867 gagctagcatacagcatcttgctcctcacc 26938896
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>dbj|AP004037.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1001_D02
          Length = 129081

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 74/90 (82%)
 Strand = Plus / Plus

                                                                          
Query: 292    gggtcggtggcctgcatctcgatctggatgccgtccagggtcctcttgaacttctcgttg 351
              ||||| |||||||||| ||| | |||||||||||||||   ||||||||||   || |||
Sbjct: 117350 gggtcagtggcctgcagctccacctggatgccgtccagctccctcttgaaccgatccttg 117409

                                            
Query: 352    gtgcttgcgtacgtcatcttgctcctcacc 381
              | ||| || |||  ||||||||||||||||
Sbjct: 117410 gagctagcatacagcatcttgctcctcacc 117439
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>dbj|AK069605.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023024H08, full
           insert sequence
          Length = 914

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 74/90 (82%)
 Strand = Plus / Minus

                                                                       
Query: 292 gggtcggtggcctgcatctcgatctggatgccgtccagggtcctcttgaacttctcgttg 351
           ||||| |||||||||| ||| | |||||||||||||||   ||||||||||   || |||
Sbjct: 506 gggtcagtggcctgcagctccacctggatgccgtccagctccctcttgaaccgatccttg 447

                                         
Query: 352 gtgcttgcgtacgtcatcttgctcctcacc 381
           | ||| || |||  ||||||||||||||||
Sbjct: 446 gagctagcatacagcatcttgctcctcacc 417
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>gb|U58278.1|TAU58278 Triticum aestivum actin-binding protein WCOR719 (Wcor719) mRNA,
           complete cds
          Length = 648

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 286 tcgctggggtcggtggcctgcatctcgatctggatgccgtccag 329
           ||||||| ||||||||||||||  |||||||| | |||||||||
Sbjct: 470 tcgctggcgtcggtggcctgcacgtcgatctgcacgccgtccag 427
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>gb|AY109068.1| Zea mays PCO068743 mRNA sequence
          Length = 731

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 71/87 (81%)
 Strand = Plus / Minus

                                                                       
Query: 294 gtcggtggcctgcatctcgatctggatgccgtccagggtcctcttgaacttctcgttggt 353
           |||||||||||| |  || | ||| |||||||||||   || ||||||| |||| |||| 
Sbjct: 502 gtcggtggcctggagatccacctgaatgccgtccagctcccgcttgaacctctccttgga 443

                                      
Query: 354 gcttgcgtacgtcatcttgctcctcac 380
           ||| |||||  ||||||||||||||||
Sbjct: 442 gctggcgtagatcatcttgctcctcac 416
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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 273     gtccaggctgatttcgctggggtcgg 298
               |||| |||||||||||||||||||||
Sbjct: 4866116 gtcccggctgatttcgctggggtcgg 4866091
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>gb|AC135102.16| Medicago truncatula clone mth2-8m3, complete sequence
          Length = 144042

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                   
Query: 333   cctcttgaacttctcgttggtgcttgcgtacgtcatcttgctcctcacctttgc 386
             |||||||||| | || ||||||||||| ||  |||||||||| |||||| ||||
Sbjct: 67112 cctcttgaacctttctttggtgcttgcataaatcatcttgcttctcacccttgc 67059
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>gb|AC115883.13| Mus musculus chromosome 3, clone RP24-376N4, complete sequence
          Length = 180645

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 327    cagggtcctcttgaacttctc 347
              |||||||||||||||||||||
Sbjct: 138047 cagggtcctcttgaacttctc 138067
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>ref|XM_811053.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053510885.10) partial mRNA
          Length = 2424

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 549 ctccttctggttctccagcct 569
           |||||||||||||||||||||
Sbjct: 8   ctccttctggttctccagcct 28
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>ref|NM_173884.2| Bos taurus tyrosine hydroxylase (TH), mRNA
          Length = 1706

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 300  ggcctgcatctcgatctggatgccgtccaggg 331
            |||||||||||||  ||||| |||||||||||
Sbjct: 1464 ggcctgcatctcgtcctggacgccgtccaggg 1433
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>gb|AC124549.5| Mus musculus BAC clone RP23-284E24 from 13, complete sequence
          Length = 199240

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 502    aaatcctcataggtggcatc 521
              ||||||||||||||||||||
Sbjct: 129508 aaatcctcataggtggcatc 129527
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>gb|AC090208.4| Homo sapiens chromosome 18, clone RP11-660C14, complete sequence
          Length = 200979

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 170    ctataattgacataataaat 189
              ||||||||||||||||||||
Sbjct: 200019 ctataattgacataataaat 200000
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>gb|AC090340.6| Homo sapiens chromosome 18, clone RP11-714M23, complete sequence
          Length = 170969

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 170    ctataattgacataataaat 189
              ||||||||||||||||||||
Sbjct: 127777 ctataattgacataataaat 127796
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>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome
          Length = 5727534

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 426     tggcacatcctccggggtgg 445
               ||||||||||||||||||||
Sbjct: 5583257 tggcacatcctccggggtgg 5583276
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>gb|AC068907.53| Mus musculus strain C57BL/6J clone rp23-347f7 map 13, complete sequence
          Length = 232472

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 502   aaatcctcataggtggcatc 521
             ||||||||||||||||||||
Sbjct: 51767 aaatcctcataggtggcatc 51786
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>gb|AF195612.1|AF195612 Lophopyrum elongatum actin depolymerization factor-like protein
           (ESI28) gene, complete cds
          Length = 1349

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 286 tcgctggggtcggtggcctgcatctcgatctggatgccgtccag 329
           ||||||| ||||||||||||||  ||||| || | |||||||||
Sbjct: 734 tcgctggcgtcggtggcctgcacgtcgatttgcacgccgtccag 691
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>gb|AF196350.1|AF196350 Lophopyrum elongatum actin depolymerization factor-like protein
           (ESI28) gene, complete cds
          Length = 1013

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 286 tcgctggggtcggtggcctgcatctcgatctggatgccgtccag 329
           ||||||| ||||||||||||||  ||||| || | |||||||||
Sbjct: 734 tcgctggcgtcggtggcctgcacgtcgatttgcacgccgtccag 691
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>gb|AC005297.1| Homo sapiens X BAC GS1-466O4 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 177503

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 166    aaatctataattgacataataaat 189
              |||||||||||||||||| |||||
Sbjct: 150960 aaatctataattgacatactaaat 150937
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>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome
          Length = 3940880

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 166     aaatctataattgacataataaat 189
               |||||||||||||| |||||||||
Sbjct: 2915373 aaatctataattgaaataataaat 2915396
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>emb|BX072552.10| Mouse DNA sequence from clone RP23-147I24 on chromosome X, complete
             sequence
          Length = 160230

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 165   caaatctataattgacataa 184
             ||||||||||||||||||||
Sbjct: 31926 caaatctataattgacataa 31945
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>emb|BX004970.8| Zebrafish DNA sequence from clone DKEY-9I4, complete sequence
          Length = 246777

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 224   ttggatggatggttggtttg 243
             ||||||||||||||||||||
Sbjct: 93043 ttggatggatggttggtttg 93024
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>emb|AL954307.7| Zebrafish DNA sequence from clone CH211-201C19, complete sequence
          Length = 175575

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 225    tggatggatggttggtttgc 244
              ||||||||||||||||||||
Sbjct: 130295 tggatggatggttggtttgc 130314
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>gb|AC003971.1|AC003971 Human BAC 367D17 from chromosome 18, complete sequence
          Length = 87978

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 170   ctataattgacataataaat 189
             ||||||||||||||||||||
Sbjct: 26898 ctataattgacataataaat 26917
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>emb|AL626775.11| Mouse DNA sequence from clone RP23-325M14 on chromosome 4, complete
             sequence
          Length = 190641

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 548   cctccttctggttctccagc 567
             ||||||||||||||||||||
Sbjct: 57660 cctccttctggttctccagc 57679
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>gb|M36705.1|BOVTYRHAA Bovine tyrosine hydroxylase mRNA, complete cds
          Length = 1706

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 300  ggcctgcatctcgatctggatgccgtccaggg 331
            |||||||||||||  ||||| |||||||||||
Sbjct: 1464 ggcctgcatctcgtcctggacgccgtccaggg 1433
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>gb|M36794.1|BOVTHA Bovine tyrosine hydroxylase mRNA, complete cds
          Length = 1696

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 300  ggcctgcatctcgatctggatgccgtccaggg 331
            |||||||||||||  ||||| |||||||||||
Sbjct: 1460 ggcctgcatctcgtcctggacgccgtccaggg 1429


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,254,636
Number of Sequences: 3902068
Number of extensions: 4254636
Number of successful extensions: 74622
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74329
Number of HSP's gapped (non-prelim): 285
length of query: 595
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 572
effective length of database: 17,143,297,704
effective search space: 9805966286688
effective search space used: 9805966286688
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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