Clone Name | rbasd17a03 |
---|---|
Clone Library Name | barley_pub |
>gb|BT009041.1| Triticum aestivum clone wdk5c.pk006.c9:fis, full insert mRNA sequence Length = 1355 Score = 383 bits (193), Expect = e-103 Identities = 302/332 (90%), Gaps = 5/332 (1%) Strand = Plus / Minus Query: 67 aaggccaacacagagtattccccatttgctacacaaagtgggactcaaacttgcaagggc 126 |||||||||||| ||||||||||||| |||||||||||||||| | || |||| ||||| Sbjct: 1230 aaggccaacacaaagtattccccatt-gctacacaaagtgggattaaagcttgacagggc 1172 Query: 127 ttaaatgtcagaccaacactagcagggacagcaaaagcttttatttctgtagag-gggct 185 || | |||||||||||||||||||||||| || |||||||||||||||||| | ||||| Sbjct: 1171 ttga-tgtcagaccaacactagcagggac-gccaaagcttttatttctgtaaggagggct 1114 Query: 186 cctttgaacggagggatttggcttcggaaaacagctttgcgcgctcgaggagtctngggg 245 ||| ||| ||||||||||||||| ||| |||||||| ||||||| |||||||| | || Sbjct: 1113 cctacgaatggagggatttggctttggagaacagcttcgcgcgcttgaggagtcccgagg 1054 Query: 246 atcactccaccaccatgctctcggcctccttcttgatagagtggaagagcaccgacgaaa 305 |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1053 gtcactcgaccaccatgctctcggcctccttcttgatggagtggaagagcaccgacgaaa 994 Query: 306 ggtagcgctctccgaagcttgggaatacaacaacaaagagtttccctgcattttcaggcc 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 993 ggtagcgctctccgaagcttgggaatacaacaacaaagagtttccctgcattttcaggcc 934 Query: 366 tctgagcaacccttgattgccgcagctgcagc 397 ||||||||| |||||||||| || |||||||| Sbjct: 933 tctgagcaa-ccttgattgcagctgctgcagc 903
>dbj|D13153.1|WHTCYS1 Triticum aestivum mRNA for O-acetylserine (thiol) lyase Length = 1371 Score = 343 bits (173), Expect = 3e-91 Identities = 297/332 (89%), Gaps = 5/332 (1%) Strand = Plus / Minus Query: 67 aaggccaacacaga-gtattccccatttgctacacaaagtgggactcaaacttgcaaggg 125 |||||||||||| | |||||||||||| |||| ||||||||||| | ||||||| ||| Sbjct: 1227 aaggccaacacaaaagtattccccatt-gctaaacaaagtgggattaaaacttgacagga 1169 Query: 126 cttaaatgtcagaccaacactagcagggacagcaaaagcttttatttctgtagaggggct 185 ||| | |||||||||||||||||||||||| || ||||||||||||||||||| ||||| Sbjct: 1168 cttga-tgtcagaccaacactagcagggac-gccaaagcttttatttctgtaggagggct 1111 Query: 186 cctttgaacggagggatttggcttcggaaaacagctttgcgcgctcgaggagtctngggg 245 ||| ||| | ||||||||||||| ||| |||| || ||||||| |||||||| | | Sbjct: 1110 cctacgaatgtagggatttggctttggagaacacgttcgcgcgcttgaggagtcccgaga 1051 Query: 246 atcactccaccaccatgctctcggcctccttcttgatagagtggaagagcaccgacgaaa 305 |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1050 gtcactcgaccaccatgctctcggcctccttcttgatggagtggaagagcaccgacgaaa 991 Query: 306 ggtagcgctctccgaagcttgggaatacaacaacaaagagtttccctgcattttcaggcc 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 990 ggtagcgctctccgaagcttgggaatacaacaacaaagagtttccctgcattttcaggcc 931 Query: 366 tctgagcaacccttgattgccgcagctgcagc 397 ||||||||| |||||||||| || |||||||| Sbjct: 930 tctgagcaa-ccttgattgcagctgctgcagc 900
>dbj|AK099598.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045K17, full insert sequence Length = 1281 Score = 125 bits (63), Expect = 1e-25 Identities = 105/119 (88%) Strand = Plus / Minus Query: 254 accaccatgctctcggcctccttcttgatagagtggaagagcaccgacgaaaggtagcgc 313 ||||||||| | || || ||||||||||| || ||||||||||||||||||||||| ||| Sbjct: 1038 accaccatgttttcagcttccttcttgatggactggaagagcaccgacgaaaggtaccgc 979 Query: 314 tctccgaagcttgggaatacaacaacaaagagtttccctgcattttcaggcctctgagc 372 || || ||||||||||| ||||||||||| ||||| ||| ||||||| ||||||||||| Sbjct: 978 tcaccaaagcttgggaagacaacaacaaaaagttttccttcattttccggcctctgagc 920
>dbj|AK061993.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-C03, full insert sequence Length = 1280 Score = 125 bits (63), Expect = 1e-25 Identities = 105/119 (88%) Strand = Plus / Minus Query: 254 accaccatgctctcggcctccttcttgatagagtggaagagcaccgacgaaaggtagcgc 313 ||||||||| | || || ||||||||||| || ||||||||||||||||||||||| ||| Sbjct: 1037 accaccatgttttcagcttccttcttgatggactggaagagcaccgacgaaaggtaccgc 978 Query: 314 tctccgaagcttgggaatacaacaacaaagagtttccctgcattttcaggcctctgagc 372 || || ||||||||||| ||||||||||| ||||| ||| ||||||| ||||||||||| Sbjct: 977 tcaccaaagcttgggaagacaacaacaaaaagttttccttcattttccggcctctgagc 919
>gb|AF073695.1|AF073695 Oryza sativa cysteine synthase (rcs1) mRNA, complete cds Length = 1290 Score = 125 bits (63), Expect = 1e-25 Identities = 105/119 (88%) Strand = Plus / Minus Query: 254 accaccatgctctcggcctccttcttgatagagtggaagagcaccgacgaaaggtagcgc 313 ||||||||| | || || ||||||||||| || ||||||||||||||||||||||| ||| Sbjct: 1032 accaccatgttttcagcttccttcttgatggactggaagagcaccgacgaaaggtaccgc 973 Query: 314 tctccgaagcttgggaatacaacaacaaagagtttccctgcattttcaggcctctgagc 372 || || ||||||||||| ||||||||||| ||||| ||| ||||||| ||||||||||| Sbjct: 972 tcaccaaagcttgggaagacaacaacaaaaagttttccttcattttccggcctctgagc 914
>gb|BT016496.1| Zea mays clone Contig329 mRNA sequence Length = 1500 Score = 103 bits (52), Expect = 4e-19 Identities = 122/144 (84%), Gaps = 1/144 (0%) Strand = Plus / Minus Query: 254 accaccatgctctcggcctccttcttgatagagtggaagagcaccgacgaaaggtagcgc 313 |||||||||||||| || ||||||||||| || ||||| |||||||| || ||||||||| Sbjct: 1185 accaccatgctctccgcttccttcttgatggactggaacagcaccgatgagaggtagcgc 1126 Query: 314 tctccgaagcttgggaatacaacaacaaagagtttccctgcattttcaggcctctgagca 373 || |||||||| ||||| || |||||||| || || || || ||||| ||||||| |||| Sbjct: 1125 tcgccgaagctcgggaacacgacaacaaatagctttccggcgttttctggcctcttagca 1066 Query: 374 acccttgattgccgcagctgcagc 397 | || | | ||||||||||||||| Sbjct: 1065 agcc-taactgccgcagctgcagc 1043
>emb|X85803.1|ZMCSOATL Z.mays mRNA for cysteine synthase Length = 1319 Score = 103 bits (52), Expect = 4e-19 Identities = 122/144 (84%), Gaps = 1/144 (0%) Strand = Plus / Minus Query: 254 accaccatgctctcggcctccttcttgatagagtggaagagcaccgacgaaaggtagcgc 313 |||||||||||||| || ||||||||||| || ||||| |||||||| || ||||||||| Sbjct: 1040 accaccatgctctccgcttccttcttgatggactggaacagcaccgatgagaggtagcgc 981 Query: 314 tctccgaagcttgggaatacaacaacaaagagtttccctgcattttcaggcctctgagca 373 || |||||||| ||||| || |||||||| || || || || ||||| ||||||| |||| Sbjct: 980 tcgccgaagctcgggaacacgacaacaaatagctttccggcgttttctggcctcttagca 921 Query: 374 acccttgattgccgcagctgcagc 397 | || | | ||||||||||||||| Sbjct: 920 agcc-taactgccgcagctgcagc 898
>gb|AY103651.1| Zea mays PCO145346 mRNA sequence Length = 1483 Score = 103 bits (52), Expect = 4e-19 Identities = 122/144 (84%), Gaps = 1/144 (0%) Strand = Plus / Minus Query: 254 accaccatgctctcggcctccttcttgatagagtggaagagcaccgacgaaaggtagcgc 313 |||||||||||||| || ||||||||||| || ||||| |||||||| || ||||||||| Sbjct: 1188 accaccatgctctccgcttccttcttgatggactggaacagcaccgatgagaggtagcgc 1129 Query: 314 tctccgaagcttgggaatacaacaacaaagagtttccctgcattttcaggcctctgagca 373 || |||||||| ||||| || |||||||| || || || || ||||| ||||||| |||| Sbjct: 1128 tcgccgaagctcgggaacacgacaacaaatagctttccggcgttttctggcctcttagca 1069 Query: 374 acccttgattgccgcagctgcagc 397 | || | | ||||||||||||||| Sbjct: 1068 agcc-taactgccgcagctgcagc 1046
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 85.7 bits (43), Expect = 1e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 254 accaccatgctctcggcctccttcttgatagagtggaagagcaccgacgaaaggtagcgc 313 ||||||||| | || || ||||||||||| || ||||||||||||||||||||||| ||| Sbjct: 26732446 accaccatgttttcagcttccttcttgatggactggaagagcaccgacgaaaggtaccgc 26732505 Query: 314 tctccgaagcttgggaatacaac 336 || || ||||||||||| ||||| Sbjct: 26732506 tcaccaaagcttgggaagacaac 26732528 Score = 44.1 bits (22), Expect = 0.34 Identities = 34/38 (89%) Strand = Plus / Plus Query: 335 acaacaaagagtttccctgcattttcaggcctctgagc 372 |||||||| ||||| ||| ||||||| ||||||||||| Sbjct: 26732881 acaacaaaaagttttccttcattttccggcctctgagc 26732918
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 85.7 bits (43), Expect = 1e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 254 accaccatgctctcggcctccttcttgatagagtggaagagcaccgacgaaaggtagcgc 313 ||||||||| | || || ||||||||||| || ||||||||||||||||||||||| ||| Sbjct: 26660616 accaccatgttttcagcttccttcttgatggactggaagagcaccgacgaaaggtaccgc 26660675 Query: 314 tctccgaagcttgggaatacaac 336 || || ||||||||||| ||||| Sbjct: 26660676 tcaccaaagcttgggaagacaac 26660698 Score = 44.1 bits (22), Expect = 0.34 Identities = 34/38 (89%) Strand = Plus / Plus Query: 335 acaacaaagagtttccctgcattttcaggcctctgagc 372 |||||||| ||||| ||| ||||||| ||||||||||| Sbjct: 26661051 acaacaaaaagttttccttcattttccggcctctgagc 26661088
>emb|AL731889.5|CNS08C8T Oryza sativa chromosome 12, . BAC OJ1122_G07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 83015 Score = 85.7 bits (43), Expect = 1e-13 Identities = 73/83 (87%) Strand = Plus / Minus Query: 254 accaccatgctctcggcctccttcttgatagagtggaagagcaccgacgaaaggtagcgc 313 ||||||||| | || || ||||||||||| || ||||||||||||||||||||||| ||| Sbjct: 38680 accaccatgttttcagcttccttcttgatggactggaagagcaccgacgaaaggtaccgc 38621 Query: 314 tctccgaagcttgggaatacaac 336 || || ||||||||||| ||||| Sbjct: 38620 tcaccaaagcttgggaagacaac 38598 Score = 44.1 bits (22), Expect = 0.34 Identities = 34/38 (89%) Strand = Plus / Minus Query: 335 acaacaaagagtttccctgcattttcaggcctctgagc 372 |||||||| ||||| ||| ||||||| ||||||||||| Sbjct: 38243 acaacaaaaagttttccttcattttccggcctctgagc 38206
>emb|BX000561.2|CNS08CE7 Oryza sativa chromosome 12, . BAC OJ1014_F06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104849 Score = 85.7 bits (43), Expect = 1e-13 Identities = 73/83 (87%) Strand = Plus / Minus Query: 254 accaccatgctctcggcctccttcttgatagagtggaagagcaccgacgaaaggtagcgc 313 ||||||||| | || || ||||||||||| || ||||||||||||||||||||||| ||| Sbjct: 66532 accaccatgttttcagcttccttcttgatggactggaagagcaccgacgaaaggtaccgc 66473 Query: 314 tctccgaagcttgggaatacaac 336 || || ||||||||||| ||||| Sbjct: 66472 tcaccaaagcttgggaagacaac 66450 Score = 44.1 bits (22), Expect = 0.34 Identities = 34/38 (89%) Strand = Plus / Minus Query: 335 acaacaaagagtttccctgcattttcaggcctctgagc 372 |||||||| ||||| ||| ||||||| ||||||||||| Sbjct: 66097 acaacaaaaagttttccttcattttccggcctctgagc 66060
>gb|BT014000.1| Lycopersicon esculentum clone 133047R, mRNA sequence Length = 1307 Score = 81.8 bits (41), Expect = 2e-12 Identities = 93/109 (85%), Gaps = 1/109 (0%) Strand = Plus / Minus Query: 289 gaagagcaccgacgaaaggtagcgctctccgaagcttgggaatacaacaacaaagagttt 348 ||||||||| || ||||| || ||||| |||||||||||||| |||||||||| ||| || Sbjct: 991 gaagagcacagaggaaagatatcgctccccgaagcttgggaaaacaacaacaatgagctt 932 Query: 349 ccctgcattttcaggcctctgagcaacccttgattgccgcagctgcagc 397 ||| ||||||||||| | || ||||| | || ||||||||||| ||||| Sbjct: 931 cccagcattttcaggacgcttagcaa-ctttaattgccgcagcagcagc 884
>emb|AM087458.1| Nicotiana tabacum mRNA for putative cytosolic cysteine synthase 7 (oas7 gene) Length = 1256 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Minus Query: 290 aagagcaccgacgaaaggtagcgctctccgaagcttgggaatacaacaacaaagagtttc 349 |||||||| || ||||| || ||||| |||||||||||||| |||||||||| ||| ||| Sbjct: 986 aagagcacagaggaaagatatcgctccccgaagcttgggaaaacaacaacaatgagcttc 927 Query: 350 cctgcattttcagg 363 || ||||||||||| Sbjct: 926 ccagcattttcagg 913
>gb|AY450295.1| Nicotiana plumbaginifolia cysteine synthase (Cs1) mRNA, partial cds Length = 1247 Score = 69.9 bits (35), Expect = 6e-09 Identities = 81/95 (85%), Gaps = 1/95 (1%) Strand = Plus / Minus Query: 302 gaaaggtagcgctctccgaagcttgggaatacaacaacaaagagtttccctgcattttca 361 ||||| || ||||| |||||||||||||| |||||||||| ||| ||||| ||||||||| Sbjct: 914 gaaagatatcgctccccgaagcttgggaaaacaacaacaatgagcttcccagcattttca 855 Query: 362 ggcctctgagcaacccttgattgccgcagctgcag 396 || | || ||||| |||||||||||||| |||| Sbjct: 854 gggcgcttagcaa-gtttgattgccgcagcagcag 821
>dbj|AB029511.2| Solanum tuberosum PCS-1 mRNA for cytosolic cysteine synthase, complete cds Length = 1354 Score = 69.9 bits (35), Expect = 6e-09 Identities = 65/75 (86%) Strand = Plus / Minus Query: 289 gaagagcaccgacgaaaggtagcgctctccgaagcttgggaatacaacaacaaagagttt 348 |||||| || || ||||| || |||||||||||||||||||| | |||||||| ||| || Sbjct: 1017 gaagagtacagaggaaagatatcgctctccgaagcttgggaaaataacaacaatgagctt 958 Query: 349 ccctgcattttcagg 363 ||| ||||||||||| Sbjct: 957 cccagcattttcagg 943
>gb|AF044172.1|AF044172 Solanum tuberosum cysteine synthase mRNA, complete cds Length = 1308 Score = 69.9 bits (35), Expect = 6e-09 Identities = 65/75 (86%) Strand = Plus / Minus Query: 289 gaagagcaccgacgaaaggtagcgctctccgaagcttgggaatacaacaacaaagagttt 348 |||||| || || ||||| || |||||||||||||||||||| | |||||||| ||| || Sbjct: 967 gaagagtacagaggaaagatatcgctctccgaagcttgggaaaataacaacaatgagctt 908 Query: 349 ccctgcattttcagg 363 ||| ||||||||||| Sbjct: 907 cccagcattttcagg 893
>ref|XM_469737.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1343 Score = 65.9 bits (33), Expect = 9e-08 Identities = 81/97 (83%) Strand = Plus / Minus Query: 256 caccatgctctcggcctccttcttgatagagtggaagagcaccgacgaaaggtagcgctc 315 ||||||| | ||||||||| ||||||| || | |||||| || ||||| ||||||||||| Sbjct: 1090 caccatgttttcggcctccctcttgatcgattcgaagaggacagacgacaggtagcgctc 1031 Query: 316 tccgaagcttgggaatacaacaacaaagagtttccct 352 |||||||| ||||| || ||||| | ||| |||||| Sbjct: 1030 accgaagctcgggaagaccacaactacgagcttccct 994
>dbj|AK071279.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023084C02, full insert sequence Length = 1337 Score = 65.9 bits (33), Expect = 9e-08 Identities = 81/97 (83%) Strand = Plus / Minus Query: 256 caccatgctctcggcctccttcttgatagagtggaagagcaccgacgaaaggtagcgctc 315 ||||||| | ||||||||| ||||||| || | |||||| || ||||| ||||||||||| Sbjct: 1079 caccatgttttcggcctccctcttgatcgattcgaagaggacagacgacaggtagcgctc 1020 Query: 316 tccgaagcttgggaatacaacaacaaagagtttccct 352 |||||||| ||||| || ||||| | ||| |||||| Sbjct: 1019 accgaagctcgggaagaccacaactacgagcttccct 983
>gb|AF073697.1|AF073697 Oryza sativa cysteine synthase (rcs3) mRNA, complete cds Length = 1363 Score = 65.9 bits (33), Expect = 9e-08 Identities = 81/97 (83%) Strand = Plus / Minus Query: 256 caccatgctctcggcctccttcttgatagagtggaagagcaccgacgaaaggtagcgctc 315 ||||||| | ||||||||| ||||||| || | |||||| || ||||| ||||||||||| Sbjct: 1104 caccatgttttcggcctccctcttgatcgattcgaagaggacagacgacaggtagcgctc 1045 Query: 316 tccgaagcttgggaatacaacaacaaagagtttccct 352 |||||||| ||||| || ||||| | ||| |||||| Sbjct: 1044 accgaagctcgggaagaccacaactacgagcttccct 1008
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 61.9 bits (31), Expect = 1e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 256 caccatgctctcggcctccttcttgatagagtggaagagcaccgacgaaaggtagcgctc 315 ||||||| | ||||||||| ||||||| || | |||||| || ||||| ||||||||||| Sbjct: 30470957 caccatgttttcggcctccctcttgatcgattcgaagaggacagacgacaggtagcgctc 30470898 Query: 316 tccgaagcttgggaa 330 |||||||| ||||| Sbjct: 30470897 accgaagctcgggaa 30470883
>gb|AC087852.11| Oryza sativa chromosome 3 BAC OJ1124_H03 genomic sequence, complete sequence Length = 149380 Score = 61.9 bits (31), Expect = 1e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 256 caccatgctctcggcctccttcttgatagagtggaagagcaccgacgaaaggtagcgctc 315 ||||||| | ||||||||| ||||||| || | |||||| || ||||| ||||||||||| Sbjct: 6058 caccatgttttcggcctccctcttgatcgattcgaagaggacagacgacaggtagcgctc 6117 Query: 316 tccgaagcttgggaa 330 |||||||| ||||| Sbjct: 6118 accgaagctcgggaa 6132
>gb|AC091811.7| Oryza sativa chromosome 3 BAC OSJNBa0069E14 genomic sequence, complete sequence Length = 139872 Score = 61.9 bits (31), Expect = 1e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 256 caccatgctctcggcctccttcttgatagagtggaagagcaccgacgaaaggtagcgctc 315 ||||||| | ||||||||| ||||||| || | |||||| || ||||| ||||||||||| Sbjct: 2530 caccatgttttcggcctccctcttgatcgattcgaagaggacagacgacaggtagcgctc 2471 Query: 316 tccgaagcttgggaa 330 |||||||| ||||| Sbjct: 2470 accgaagctcgggaa 2456
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 61.9 bits (31), Expect = 1e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 256 caccatgctctcggcctccttcttgatagagtggaagagcaccgacgaaaggtagcgctc 315 ||||||| | ||||||||| ||||||| || | |||||| || ||||| ||||||||||| Sbjct: 30562379 caccatgttttcggcctccctcttgatcgattcgaagaggacagacgacaggtagcgctc 30562320 Query: 316 tccgaagcttgggaa 330 |||||||| ||||| Sbjct: 30562319 accgaagctcgggaa 30562305
>dbj|AB040503.1| Allium tuberosum Bsas1 mRNA for cysteine synthase, complete cds Length = 1671 Score = 60.0 bits (30), Expect = 6e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 256 caccatgctctcggcctccttcttgatagagtggaagagcaccgacgaaaggtagcgctc 315 |||||||||||||||||| ||||| || || ||||||||||| | ||||| || ||||| Sbjct: 1382 caccatgctctcggcctctttcttaattgactggaagagcacggtagaaagatatcgctc 1323 Query: 316 tccgaagcttgggaatacaacaacaa 341 || ||||| ||||| ||||| |||| Sbjct: 1322 gccaaagctggggaagacaaccacaa 1297
>emb|X81973.1|ATCSMRNA A.thaliana mRNA for cysteine synthase Length = 1564 Score = 50.1 bits (25), Expect = 0.006 Identities = 71/85 (83%), Gaps = 1/85 (1%) Strand = Plus / Minus Query: 313 ctctccgaagcttgggaatacaacaacaaagagtttccctgcattttcaggcctctgagc 372 |||||||||||| || || |||||| | | |||||| || ||||| ||||| |||| ||| Sbjct: 1254 ctctccgaagctcggaaaaacaacagctatgagttttccagcattctcaggtctcttagc 1195 Query: 373 aacccttgattgccgcagctgcagc 397 ||| |||||||| ||||||||||| Sbjct: 1194 cacc-ttgattgcagcagctgcagc 1171
>gb|AY353092.1| Populus x canescens O-acetylserine (thiol)lyase mRNA, partial cds Length = 1192 Score = 48.1 bits (24), Expect = 0.022 Identities = 90/112 (80%) Strand = Plus / Minus Query: 257 accatgctctcggcctccttcttgatagagtggaagagcaccgacgaaaggtagcgctct 316 |||||| |||||||||||||||| | || | || ||||| || || ||||| |||||| Sbjct: 866 accatgttctcggcctccttcttcactgattcaaaaagcacagaggataggtaacgctct 807 Query: 317 ccgaagcttgggaatacaacaacaaagagtttccctgcattttcaggcctct 368 || || || ||||| | |||||| |||||| || |||||||||||||||| Sbjct: 806 ccaaaactagggaagatcgcaacaatgagttttccagcattttcaggcctct 755
>emb|X66860.1|SOCYSK S.oleracea cysk mRNA for O-acetylserine(thiol) lyase Length = 1432 Score = 48.1 bits (24), Expect = 0.022 Identities = 39/44 (88%) Strand = Plus / Minus Query: 320 aagcttgggaatacaacaacaaagagtttccctgcattttcagg 363 ||||||||||| |||||| ||| ||||| |||||||||||||| Sbjct: 1132 aagcttgggaacacaacagcaataagttttcctgcattttcagg 1089
>dbj|D14722.1|SPICYSSY Spinacia oleracea mRNA for chloroplast cysteine synthase, complete cds Length = 1484 Score = 48.1 bits (24), Expect = 0.022 Identities = 39/44 (88%) Strand = Plus / Minus Query: 320 aagcttgggaatacaacaacaaagagtttccctgcattttcagg 363 ||||||||||| |||||| ||| ||||| |||||||||||||| Sbjct: 1140 aagcttgggaacacaacagcaataagttttcctgcattttcagg 1097
>gb|L05184.1|SPIOACET Spinacia oleracea chlorplast O-acetylserine-(thiol)-lyase mRNA, complete cds Length = 1446 Score = 48.1 bits (24), Expect = 0.022 Identities = 39/44 (88%) Strand = Plus / Minus Query: 320 aagcttgggaatacaacaacaaagagtttccctgcattttcagg 363 ||||||||||| |||||| ||| ||||| |||||||||||||| Sbjct: 1139 aagcttgggaacacaacagcaataagttttcctgcattttcagg 1096
>gb|AF078693.1|AF078693 Chlamydomonas reinhardtii putative O-acetylserine(thiol)lyase precursor (Crcys-1A) mRNA, nuclear gene encoding organellar protein, complete cds Length = 1492 Score = 46.1 bits (23), Expect = 0.087 Identities = 32/35 (91%) Strand = Plus / Minus Query: 287 tggaagagcaccgacgaaaggtagcgctctccgaa 321 ||||| ||||||||||| ||||||||||| ||||| Sbjct: 1082 tggaacagcaccgacgacaggtagcgctcgccgaa 1048
>emb|X64874.1|CACYSSYNM C.annuum mRNA for cysteine synthase Length = 1313 Score = 44.1 bits (22), Expect = 0.34 Identities = 40/46 (86%) Strand = Plus / Minus Query: 323 cttgggaatacaacaacaaagagtttccctgcattttcaggcctct 368 ||||| |||||||| ||| |||||||||||||| |||||||||| Sbjct: 1047 cttggaaatacaaccgcaataagtttccctgcattctcaggcctct 1002
>ref|NM_129937.2| Arabidopsis thaliana OASB (CYSTEINE SYNTHASE 1); cysteine synthase AT2G43750 (OASB) mRNA, complete cds Length = 1602 Score = 42.1 bits (21), Expect = 1.4 Identities = 67/81 (82%), Gaps = 1/81 (1%) Strand = Plus / Minus Query: 317 ccgaagcttgggaatacaacaacaaagagtttccctgcattttcaggcctctgagcaacc 376 |||||||| ||||| ||||| | | ||||||||| ||||||||||| |||| |||| | Sbjct: 1336 ccgaagctcgggaacacaacggctatgagtttcccggcattttcaggtctctttgcaa-c 1278 Query: 377 cttgattgccgcagctgcagc 397 || |||||| ||||| ||||| Sbjct: 1277 ctggattgcagcagcagcagc 1257
>gb|AY766093.1| Allium sativum chloroplast cysteine synthase GCS2 (gcs2) mRNA, complete cds; nuclear gene for chloroplast product Length = 1424 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 343 gagtttccctgcattttcagg 363 ||||||||||||||||||||| Sbjct: 1088 gagtttccctgcattttcagg 1068
>ref|XM_362581.1| Magnaporthe grisea 70-15 hypothetical protein (MG08164.4) partial mRNA Length = 1116 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 262 gctctcggcctccttcttgat 282 ||||||||||||||||||||| Sbjct: 900 gctctcggcctccttcttgat 880
>ref|XM_711631.1| Candida albicans SC5314 putative protein kinase regulator of (H+)-ATPase (CaO19_3415), mRNA Length = 2439 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 gcaaaagcttttatttctgta 177 ||||||||||||||||||||| Sbjct: 1292 gcaaaagcttttatttctgta 1272
>ref|XM_711571.1| Candida albicans SC5314 putative protein kinase regulator of (H+)-ATPase (CaO19_10918), mRNA Length = 2439 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 gcaaaagcttttatttctgta 177 ||||||||||||||||||||| Sbjct: 1292 gcaaaagcttttatttctgta 1272
>gb|AY096681.1| Arabidopsis thaliana putative cysteine synthase cpACS1 (At2g43750) mRNA, complete cds Length = 1210 Score = 42.1 bits (21), Expect = 1.4 Identities = 67/81 (82%), Gaps = 1/81 (1%) Strand = Plus / Minus Query: 317 ccgaagcttgggaatacaacaacaaagagtttccctgcattttcaggcctctgagcaacc 376 |||||||| ||||| ||||| | | ||||||||| ||||||||||| |||| |||| | Sbjct: 1106 ccgaagctcgggaacacaacggctatgagtttcccggcattttcaggtctctttgcaa-c 1048 Query: 377 cttgattgccgcagctgcagc 397 || |||||| ||||| ||||| Sbjct: 1047 ctggattgcagcagcagcagc 1027
>emb|X81698.1|ATCPACS1 A.thaliana cpACS1 mRNA for cysteine synthase Length = 1420 Score = 42.1 bits (21), Expect = 1.4 Identities = 67/81 (82%), Gaps = 1/81 (1%) Strand = Plus / Minus Query: 317 ccgaagcttgggaatacaacaacaaagagtttccctgcattttcaggcctctgagcaacc 376 |||||||| ||||| ||||| | | ||||||||| ||||||||||| |||| |||| | Sbjct: 1161 ccgaagctcgggaacacaacggctatgagtttcccggcattttcaggtctctttgcaa-c 1103 Query: 377 cttgattgccgcagctgcagc 397 || |||||| ||||| ||||| Sbjct: 1102 ctggattgcagcagcagcagc 1082
>emb|X80377.2|ATOACLY2 Arabidopsis thaliana mRNA for O-acetylserine lyase (At.OAS.7-4) Length = 1378 Score = 42.1 bits (21), Expect = 1.4 Identities = 67/81 (82%), Gaps = 1/81 (1%) Strand = Plus / Minus Query: 317 ccgaagcttgggaatacaacaacaaagagtttccctgcattttcaggcctctgagcaacc 376 |||||||| ||||| ||||| | | ||||||||| ||||||||||| |||| |||| | Sbjct: 1118 ccgaagctcgggaacacaacggctatgagtttcccggcattttcaggtctctttgcaa-c 1060 Query: 377 cttgattgccgcagctgcagc 397 || |||||| ||||| ||||| Sbjct: 1059 ctggattgcagcagcagcagc 1039
>gb|AY065375.1| Arabidopsis thaliana cysteine synthase cpACS1 (At2g43750) mRNA, complete cds Length = 1489 Score = 42.1 bits (21), Expect = 1.4 Identities = 67/81 (82%), Gaps = 1/81 (1%) Strand = Plus / Minus Query: 317 ccgaagcttgggaatacaacaacaaagagtttccctgcattttcaggcctctgagcaacc 376 |||||||| ||||| ||||| | | ||||||||| ||||||||||| |||| |||| | Sbjct: 1230 ccgaagctcgggaacacaacggctatgagtttcccggcattttcaggtctctttgcaa-c 1172 Query: 377 cttgattgccgcagctgcagc 397 || |||||| ||||| ||||| Sbjct: 1171 ctggattgcagcagcagcagc 1151
>emb|AL033391.1|CAC20C1 C.albicans cosmid Ca20C1 Length = 37968 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 gcaaaagcttttatttctgta 177 ||||||||||||||||||||| Sbjct: 33620 gcaaaagcttttatttctgta 33600
>gb|AE016826.1| Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genome Length = 615980 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 374 acccttgattgccgcagctgc 394 ||||||||||||||||||||| Sbjct: 337175 acccttgattgccgcagctgc 337195
>emb|BX819476.1|CNS0A9QD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB80ZG05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1346 Score = 42.1 bits (21), Expect = 1.4 Identities = 67/81 (82%), Gaps = 1/81 (1%) Strand = Plus / Minus Query: 317 ccgaagcttgggaatacaacaacaaagagtttccctgcattttcaggcctctgagcaacc 376 |||||||| ||||| ||||| | | ||||||||| ||||||||||| |||| |||| | Sbjct: 1146 ccgaagctcgggaacacaacggctatgagtttcccggcattttcaggtctctttgcaa-c 1088 Query: 377 cttgattgccgcagctgcagc 397 || |||||| ||||| ||||| Sbjct: 1087 ctggattgcagcagcagcagc 1067
>gb|AY086156.1| Arabidopsis thaliana clone 21866 mRNA, complete sequence Length = 1503 Score = 42.1 bits (21), Expect = 1.4 Identities = 67/81 (82%), Gaps = 1/81 (1%) Strand = Plus / Minus Query: 317 ccgaagcttgggaatacaacaacaaagagtttccctgcattttcaggcctctgagcaacc 376 |||||||| ||||| ||||| | | ||||||||| ||||||||||| |||| |||| | Sbjct: 1261 ccgaagctcgggaacacaacggctatgagtttcccggcattttcaggtctctttgcaa-c 1203 Query: 377 cttgattgccgcagctgcagc 397 || |||||| ||||| ||||| Sbjct: 1202 ctggattgcagcagcagcagc 1182
>gb|AY849661.1| Magnaporthe grisea disulfide isomerase-like protein mRNA, complete cds Length = 1315 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 262 gctctcggcctccttcttgat 282 ||||||||||||||||||||| Sbjct: 939 gctctcggcctccttcttgat 919
>gb|AC121851.4| Mus musculus chromosome 8 clone RP24-92F5, complete sequence Length = 184603 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 gacacatggaattcaaatat 38 |||||||||||||||||||| Sbjct: 59057 gacacatggaattcaaatat 59076
>gb|AC146947.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0057M18 map near E10005S, complete sequence Length = 140920 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 58 aatcgccagaaggccaacacagag 81 ||||||||||||||||||| |||| Sbjct: 110144 aatcgccagaaggccaacaaagag 110121
>emb|CR956635.11| Pig DNA sequence from clone CH242-184L20 on chromosome 17, complete sequence Length = 211741 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 acacaaagtgggactcaaac 116 |||||||||||||||||||| Sbjct: 205383 acacaaagtgggactcaaac 205402
>gb|AC135605.25| Medicago truncatula clone mth2-7m1, complete sequence Length = 121648 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 ccgaagcttgggaatacaac 336 |||||||||||||||||||| Sbjct: 4376 ccgaagcttgggaatacaac 4395
>gb|AE017245.1| Mycoplasma synoviae 53, complete genome Length = 799476 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 cagcaaaagcttttatttct 174 |||||||||||||||||||| Sbjct: 112956 cagcaaaagcttttatttct 112975
>gb|AC010052.7| Drosophila melanogaster 3L BAC RP98-5G1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 164941 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 ttccccatttgctacacaaa 103 |||||||||||||||||||| Sbjct: 136408 ttccccatttgctacacaaa 136427
>emb|BX511073.3| Zebrafish DNA sequence from clone DKEY-245I10 in linkage group 8, complete sequence Length = 218866 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 cagaccaacactagcaggga 154 |||||||||||||||||||| Sbjct: 197879 cagaccaacactagcaggga 197898
>gb|AY122198.1| Drosophila melanogaster LD46144 full insert cDNA Length = 887 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 ctctcggcctccttcttgat 282 |||||||||||||||||||| Sbjct: 501 ctctcggcctccttcttgat 482
>ref|NM_169155.1| Drosophila melanogaster CG1307-RB (CG1307), mRNA Length = 970 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 ctctcggcctccttcttgat 282 |||||||||||||||||||| Sbjct: 602 ctctcggcctccttcttgat 583
>ref|XM_686774.1| PREDICTED: Danio rerio similar to relaxin (LOC563417), mRNA Length = 867 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 ggatcactccaccaccatgc 263 |||||||||||||||||||| Sbjct: 380 ggatcactccaccaccatgc 399
>gb|AC095013.1| Drosophila melanogaster, chromosome 3R, region 83F-83F, BAC clone BACR19I14, complete sequence Length = 175648 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 ctctcggcctccttcttgat 282 |||||||||||||||||||| Sbjct: 122296 ctctcggcctccttcttgat 122315
>gb|AC010558.4| Drosophila melanogaster 3L BAC RPCI98-1K9 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 170356 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 ttccccatttgctacacaaa 103 |||||||||||||||||||| Sbjct: 62108 ttccccatttgctacacaaa 62127
>gb|AE001572.2| Drosophila melanogaster Antennapedia complex (ANT-C),complete sequence Length = 429825 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 ctctcggcctccttcttgat 282 |||||||||||||||||||| Sbjct: 400167 ctctcggcctccttcttgat 400148
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 58 aatcgccagaaggccaacacagag 81 ||||||||||||||||||| |||| Sbjct: 13752335 aatcgccagaaggccaacaaagag 13752312
>gb|AC158660.4| Mus musculus 6 BAC RP23-387H1 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 199439 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cacatggaattcaaatatac 40 |||||||||||||||||||| Sbjct: 152294 cacatggaattcaaatatac 152275
>dbj|BA000004.3| Bacillus halodurans C-125 DNA, complete genome Length = 4202352 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 acagcaaaagcttttatttc 173 |||||||||||||||||||| Sbjct: 1523191 acagcaaaagcttttatttc 1523210
>emb|AL935283.16| Zebrafish DNA sequence from clone CH211-247O1 in linkage group 7, complete sequence Length = 197927 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 cagaccaacactagcaggga 154 |||||||||||||||||||| Sbjct: 64945 cagaccaacactagcaggga 64926
>gb|AF121870.1|AF121870 Neisseria elongata porin precursor (por) gene, partial cds Length = 1002 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 gcttgggaatacaacaacaa 341 |||||||||||||||||||| Sbjct: 277 gcttgggaatacaacaacaa 296
>gb|AE003674.3| Drosophila melanogaster chromosome 3R, section 10 of 118 of the complete sequence Length = 298020 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 ctctcggcctccttcttgat 282 |||||||||||||||||||| Sbjct: 176440 ctctcggcctccttcttgat 176459
>gb|AE003548.3| Drosophila melanogaster chromosome 3L, section 37 of 83 of the complete sequence Length = 244140 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 ttccccatttgctacacaaa 103 |||||||||||||||||||| Sbjct: 73393 ttccccatttgctacacaaa 73412
>emb|BX530024.6| Zebrafish DNA sequence from clone RP71-39B20, complete sequence Length = 146464 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 ggatcactccaccaccatgc 263 |||||||||||||||||||| Sbjct: 66718 ggatcactccaccaccatgc 66737
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 58 aatcgccagaaggccaacacagag 81 ||||||||||||||||||| |||| Sbjct: 13834333 aatcgccagaaggccaacaaagag 13834310
>gb|AC001652.1|AC001652 Drosophila melanogaster DNA sequence (P1 DS00004 (D12)), complete sequence Length = 85757 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 ctctcggcctccttcttgat 282 |||||||||||||||||||| Sbjct: 29659 ctctcggcctccttcttgat 29678
>emb|AM161139.1| Danio rerio partial mRNA for Relaxin 3c (rlx 3c gene) Length = 552 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 ggatcactccaccaccatgc 263 |||||||||||||||||||| Sbjct: 435 ggatcactccaccaccatgc 454
>gb|AY834225.1| Danio rerio relaxin 3c mRNA, complete cds Length = 462 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 ggatcactccaccaccatgc 263 |||||||||||||||||||| Sbjct: 342 ggatcactccaccaccatgc 361 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,804,644 Number of Sequences: 3902068 Number of extensions: 3804644 Number of successful extensions: 67266 Number of sequences better than 10.0: 71 Number of HSP's better than 10.0 without gapping: 70 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 67068 Number of HSP's gapped (non-prelim): 187 length of query: 400 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 378 effective length of database: 17,147,199,772 effective search space: 6481641513816 effective search space used: 6481641513816 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)